BLASTX nr result
ID: Catharanthus23_contig00023584
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00023584
(1231 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s... 498 e-138
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s... 494 e-137
emb|CBI16226.3| unnamed protein product [Vitis vinifera] 482 e-133
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 482 e-133
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s... 476 e-131
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr... 476 e-131
ref|XP_002531828.1| DNA-directed RNA polymerase III largest subu... 471 e-130
gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao] 468 e-129
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s... 455 e-125
gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Mor... 451 e-124
ref|XP_002300065.1| DNA-directed RNA polymerase family protein [... 448 e-123
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s... 435 e-119
gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlise... 430 e-118
gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japo... 428 e-117
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g... 428 e-117
ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III s... 427 e-117
ref|XP_004505924.1| PREDICTED: DNA-directed RNA polymerase III s... 425 e-116
ref|XP_004505923.1| PREDICTED: DNA-directed RNA polymerase III s... 425 e-116
ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi... 424 e-116
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s... 421 e-115
>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Solanum tuberosum]
Length = 1394
Score = 498 bits (1281), Expect = e-138
Identities = 266/360 (73%), Positives = 302/360 (83%), Gaps = 5/360 (1%)
Frame = -2
Query: 1230 EAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIDAKKNISTPIITA 1051
EAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEII+A K I+TPIIT
Sbjct: 1031 EAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKITTPIITT 1090
Query: 1050 KLEREYNPKEARIVKARIEKTLLSQVAKSIKIVMSARLASIVITLDIGMIQALRLHVDAY 871
KL N AR++KARIEKTLL QVAKS+KIV+++RLASI I+LD+ IQ +L +DAY
Sbjct: 1091 KLLSAANLTAARMIKARIEKTLLGQVAKSVKIVLASRLASIAISLDMETIQVSQLCIDAY 1150
Query: 870 RVKQSILQTKKLKLKEQHVKVLNTQKLEVVPQADKSKLHFELHTIKNKLPMVVVSGIDTV 691
VKQSILQT K+KLKE +KVLN +KLEV PQA+K KLHFELH +KNKLP VVV GI TV
Sbjct: 1151 TVKQSILQTSKIKLKEHQIKVLNPRKLEVFPQANKDKLHFELHRLKNKLPAVVVKGITTV 1210
Query: 690 ERVIINKE---DKEKEM--PKYNLFVEGMGLLGVMGTEGVNGCETKSNHIMEVLRTLGIE 526
+R ++NKE D++ ++ Y L VEG GLL VMG EGV+G TKSNHIMEV TLGIE
Sbjct: 1211 QRAVVNKEQQKDRKNDVKGETYELLVEGTGLLAVMGIEGVDGRYTKSNHIMEVQNTLGIE 1270
Query: 525 AARSAIIDEIQTTMSSHGMTIDIRHMMLLADLMTSKGEVLGITRTGVQKMKDSVLMLASF 346
AAR +IIDEI TMSSHGMTID+RHMMLLADLMT KGEVLGITR GVQKMKDSVLMLASF
Sbjct: 1271 AARVSIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMKDSVLMLASF 1330
Query: 345 EKTADHLFSAAVNGREDKIEGVSECIIMGIPMQMGTGMLKVRQRMQQQEVKLNYALDPII 166
EKT DHLF+A+VNGR+DKIEGV+ECIIMGIPM +GTGM K+RQR++Q V+LNY DPII
Sbjct: 1331 EKTTDHLFNASVNGRDDKIEGVTECIIMGIPMTIGTGMFKLRQRVEQ--VELNYQPDPII 1388
>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Solanum
lycopersicum]
Length = 1390
Score = 494 bits (1273), Expect = e-137
Identities = 264/360 (73%), Positives = 302/360 (83%), Gaps = 5/360 (1%)
Frame = -2
Query: 1230 EAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIDAKKNISTPIITA 1051
EAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEII+A K I+TPIITA
Sbjct: 1031 EAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKITTPIITA 1090
Query: 1050 KLEREYNPKEARIVKARIEKTLLSQVAKSIKIVMSARLASIVITLDIGMIQALRLHVDAY 871
KL N AR++KARIEKTLL QVAKS+KIV+++RLASI I+LD+ IQ +L +DAY
Sbjct: 1091 KLLSAGNLTAARMIKARIEKTLLGQVAKSVKIVLASRLASIAISLDMETIQVSQLCIDAY 1150
Query: 870 RVKQSILQTKKLKLKEQHVKVLNTQKLEVVPQADKSKLHFELHTIKNKLPMVVVSGIDTV 691
VKQSILQT K+KLKE +KVLN +KLEV PQA+K KLHFELH +KNKLP VVV GI TV
Sbjct: 1151 TVKQSILQTSKIKLKEHQIKVLNPRKLEVFPQANKDKLHFELHRLKNKLPAVVVKGITTV 1210
Query: 690 ERVIINKE---DKEKEM--PKYNLFVEGMGLLGVMGTEGVNGCETKSNHIMEVLRTLGIE 526
+R ++NKE D++ ++ Y L VEG GLL VMG EGV+G TKSNHIMEV TLGIE
Sbjct: 1211 QRAVVNKEQQKDRKNDVKGETYELLVEGTGLLAVMGIEGVDGRYTKSNHIMEVQHTLGIE 1270
Query: 525 AARSAIIDEIQTTMSSHGMTIDIRHMMLLADLMTSKGEVLGITRTGVQKMKDSVLMLASF 346
AAR +IIDEI TMSSHGMTID+RHMMLLADLMT KGEVLGITR GVQKMKDSVLMLASF
Sbjct: 1271 AARVSIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMKDSVLMLASF 1330
Query: 345 EKTADHLFSAAVNGREDKIEGVSECIIMGIPMQMGTGMLKVRQRMQQQEVKLNYALDPII 166
EKT DHLF+A+VNGR+DKIEGV+ECIIMGIPM +GTGM K+RQR+ + V+LNY DP++
Sbjct: 1331 EKTTDHLFNASVNGRDDKIEGVTECIIMGIPMTIGTGMFKLRQRV--EHVELNYQPDPMM 1388
>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
Length = 1819
Score = 482 bits (1241), Expect = e-133
Identities = 256/356 (71%), Positives = 299/356 (83%)
Frame = -2
Query: 1230 EAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIDAKKNISTPIITA 1051
EAGTAIGAIGA SIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEII+ K ISTPIITA
Sbjct: 1469 EAGTAIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIITA 1528
Query: 1050 KLEREYNPKEARIVKARIEKTLLSQVAKSIKIVMSARLASIVITLDIGMIQALRLHVDAY 871
LE N K AR+VK RIE+T L QVAKSIKIV+++RLA I + LD+ IQA +L +D+
Sbjct: 1529 ALECNNNVKTARMVKGRIERTTLGQVAKSIKIVLTSRLALIAVALDMEGIQASQLSIDSN 1588
Query: 870 RVKQSILQTKKLKLKEQHVKVLNTQKLEVVPQADKSKLHFELHTIKNKLPMVVVSGIDTV 691
V++SIL+ +++KLK+QH+KVL+ KLEV PQ D+S +HFELH +KN LP VVV GI+TV
Sbjct: 1589 IVRESILRNRRIKLKQQHIKVLDAGKLEVHPQGDRSTIHFELHALKNLLPTVVVKGIETV 1648
Query: 690 ERVIINKEDKEKEMPKYNLFVEGMGLLGVMGTEGVNGCETKSNHIMEVLRTLGIEAARSA 511
ER +INK++K KYNL VEG GL VMGTEGV G ET SNHI+EV +TLGIEAAR
Sbjct: 1649 ERAVINKDNK----VKYNLLVEGTGLQTVMGTEGVIGRETTSNHIIEVQQTLGIEAARKC 1704
Query: 510 IIDEIQTTMSSHGMTIDIRHMMLLADLMTSKGEVLGITRTGVQKMKDSVLMLASFEKTAD 331
II+EIQ TM+SHGM+IDIRHMMLLADLMT +GEVLGITR G+QKM SVLMLASFEKTAD
Sbjct: 1705 IINEIQYTMASHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTAD 1764
Query: 330 HLFSAAVNGREDKIEGVSECIIMGIPMQMGTGMLKVRQRMQQQEVKLNYALDPIIS 163
HLF+A+V+GR+DKIEGVSECIIMGIPMQ+GTG+LKVRQR+QQ +L+Y LDPIIS
Sbjct: 1765 HLFNASVSGRDDKIEGVSECIIMGIPMQLGTGILKVRQRLQQVP-ELSYGLDPIIS 1819
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
vinifera]
Length = 1383
Score = 482 bits (1241), Expect = e-133
Identities = 256/356 (71%), Positives = 299/356 (83%)
Frame = -2
Query: 1230 EAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIDAKKNISTPIITA 1051
EAGTAIGAIGA SIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEII+ K ISTPIITA
Sbjct: 1033 EAGTAIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIITA 1092
Query: 1050 KLEREYNPKEARIVKARIEKTLLSQVAKSIKIVMSARLASIVITLDIGMIQALRLHVDAY 871
LE N K AR+VK RIE+T L QVAKSIKIV+++RLA I + LD+ IQA +L +D+
Sbjct: 1093 ALECNNNVKTARMVKGRIERTTLGQVAKSIKIVLTSRLALIAVALDMEGIQASQLSIDSN 1152
Query: 870 RVKQSILQTKKLKLKEQHVKVLNTQKLEVVPQADKSKLHFELHTIKNKLPMVVVSGIDTV 691
V++SIL+ +++KLK+QH+KVL+ KLEV PQ D+S +HFELH +KN LP VVV GI+TV
Sbjct: 1153 IVRESILRNRRIKLKQQHIKVLDAGKLEVHPQGDRSTIHFELHALKNLLPTVVVKGIETV 1212
Query: 690 ERVIINKEDKEKEMPKYNLFVEGMGLLGVMGTEGVNGCETKSNHIMEVLRTLGIEAARSA 511
ER +INK++K KYNL VEG GL VMGTEGV G ET SNHI+EV +TLGIEAAR
Sbjct: 1213 ERAVINKDNK----VKYNLLVEGTGLQTVMGTEGVIGRETTSNHIIEVQQTLGIEAARKC 1268
Query: 510 IIDEIQTTMSSHGMTIDIRHMMLLADLMTSKGEVLGITRTGVQKMKDSVLMLASFEKTAD 331
II+EIQ TM+SHGM+IDIRHMMLLADLMT +GEVLGITR G+QKM SVLMLASFEKTAD
Sbjct: 1269 IINEIQYTMASHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTAD 1328
Query: 330 HLFSAAVNGREDKIEGVSECIIMGIPMQMGTGMLKVRQRMQQQEVKLNYALDPIIS 163
HLF+A+V+GR+DKIEGVSECIIMGIPMQ+GTG+LKVRQR+QQ +L+Y LDPIIS
Sbjct: 1329 HLFNASVSGRDDKIEGVSECIIMGIPMQLGTGILKVRQRLQQVP-ELSYGLDPIIS 1383
>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1|
PREDICTED: DNA-directed RNA polymerase III subunit
rpc1-like isoform X2 [Citrus sinensis]
Length = 1404
Score = 476 bits (1224), Expect = e-131
Identities = 252/363 (69%), Positives = 295/363 (81%), Gaps = 7/363 (1%)
Frame = -2
Query: 1230 EAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIDAKKNISTPIITA 1051
EAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMN+T GVPRIKEII+ K ISTPIITA
Sbjct: 1042 EAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITA 1101
Query: 1050 KLEREYNPKEARIVKARIEKTLLSQVAKSIKIVMSARLASIVITLDIGMIQALRLHVDAY 871
+LE N AR+VK RIEKTLL QVAKSIKIVM++RLASIVI LD+ IQ L ++A
Sbjct: 1102 ELECNDNENAARVVKGRIEKTLLGQVAKSIKIVMTSRLASIVIALDMETIQDAHLCINAD 1161
Query: 870 RVKQSILQTKKLKLKEQHVKVLNTQKLEVVPQADKSKLHFELHTIKNKLPMVVVSGIDTV 691
VK+SI+QT K+KLK+QH+KVL+ +KLE+ P DKSK+HFEL+++KN LPMV+V GI TV
Sbjct: 1162 IVKESIVQTPKIKLKQQHIKVLDFRKLEIFPPVDKSKIHFELYSLKNVLPMVIVKGIKTV 1221
Query: 690 ERVIINKEDKEK-------EMPKYNLFVEGMGLLGVMGTEGVNGCETKSNHIMEVLRTLG 532
ERV+I +++KEK E KY L VEG GL VMG EG++GC+TKSNHI EV +TLG
Sbjct: 1222 ERVVIAEKEKEKRKVKENGEKKKYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLG 1281
Query: 531 IEAARSAIIDEIQTTMSSHGMTIDIRHMMLLADLMTSKGEVLGITRTGVQKMKDSVLMLA 352
IEAAR IIDEI TM +HGM+ID RHMMLLADLMT +GEVLGITR G+QKM SVLMLA
Sbjct: 1282 IEAARICIIDEINETMKAHGMSIDKRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLA 1341
Query: 351 SFEKTADHLFSAAVNGREDKIEGVSECIIMGIPMQMGTGMLKVRQRMQQQEVKLNYALDP 172
SFEKTADHLF+A+VNGR+D+IEGVSECIIMGIPM +GTG+LK+RQR + A DP
Sbjct: 1342 SFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILKIRQRDAVPPMLKYGAPDP 1401
Query: 171 IIS 163
I+S
Sbjct: 1402 IMS 1404
>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
gi|557526635|gb|ESR37941.1| hypothetical protein
CICLE_v10027681mg [Citrus clementina]
Length = 1397
Score = 476 bits (1224), Expect = e-131
Identities = 252/363 (69%), Positives = 295/363 (81%), Gaps = 7/363 (1%)
Frame = -2
Query: 1230 EAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIDAKKNISTPIITA 1051
EAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMN+T GVPRIKEII+ K ISTPIITA
Sbjct: 1035 EAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITA 1094
Query: 1050 KLEREYNPKEARIVKARIEKTLLSQVAKSIKIVMSARLASIVITLDIGMIQALRLHVDAY 871
+LE N AR+VK RIEKTLL QVAKSIKIVM++RLASIVI LD+ IQ L ++A
Sbjct: 1095 ELECNDNENAARVVKGRIEKTLLGQVAKSIKIVMTSRLASIVIALDMETIQDAHLCINAD 1154
Query: 870 RVKQSILQTKKLKLKEQHVKVLNTQKLEVVPQADKSKLHFELHTIKNKLPMVVVSGIDTV 691
VK+SI+QT K+KLK+QH+KVL+ +KLE+ P DKSK+HFEL+++KN LPMV+V GI TV
Sbjct: 1155 IVKESIVQTPKIKLKQQHIKVLDFRKLEIFPPVDKSKIHFELYSLKNVLPMVIVKGIKTV 1214
Query: 690 ERVIINKEDKEK-------EMPKYNLFVEGMGLLGVMGTEGVNGCETKSNHIMEVLRTLG 532
ERV+I +++KEK E KY L VEG GL VMG EG++GC+TKSNHI EV +TLG
Sbjct: 1215 ERVVIAEKEKEKRKVKENGEKKKYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLG 1274
Query: 531 IEAARSAIIDEIQTTMSSHGMTIDIRHMMLLADLMTSKGEVLGITRTGVQKMKDSVLMLA 352
IEAAR IIDEI TM +HGM+ID RHMMLLADLMT +GEVLGITR G+QKM SVLMLA
Sbjct: 1275 IEAARICIIDEINETMKAHGMSIDKRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLA 1334
Query: 351 SFEKTADHLFSAAVNGREDKIEGVSECIIMGIPMQMGTGMLKVRQRMQQQEVKLNYALDP 172
SFEKTADHLF+A+VNGR+D+IEGVSECIIMGIPM +GTG+LK+RQR + A DP
Sbjct: 1335 SFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILKIRQRDAVPPMLKYGAPDP 1394
Query: 171 IIS 163
I+S
Sbjct: 1395 IMS 1397
>ref|XP_002531828.1| DNA-directed RNA polymerase III largest subunit, putative [Ricinus
communis] gi|223528524|gb|EEF30548.1| DNA-directed RNA
polymerase III largest subunit, putative [Ricinus
communis]
Length = 1383
Score = 471 bits (1212), Expect = e-130
Identities = 249/361 (68%), Positives = 293/361 (81%), Gaps = 5/361 (1%)
Frame = -2
Query: 1230 EAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIDAKKNISTPIITA 1051
E GTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMN+T GVPRIKEII+ K ISTPIITA
Sbjct: 1024 EPGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKKISTPIITA 1083
Query: 1050 KLEREYNPKEARIVKARIEKTLLSQVAKSIKIVMSARLASIVITLDIGMIQALRLHVDAY 871
+LE+ N ARI K RI+KT+L QVAKSIKIVM++R AS+VITLD+ IQ +L +DA
Sbjct: 1084 ELEQNTNVTAARIAKGRIQKTVLGQVAKSIKIVMTSRSASVVITLDMKTIQNAQLSLDAN 1143
Query: 870 RVKQSILQTKKLKLKEQHVKVLNTQKLEVVPQADKSKLHFELHTIKNKLPMVVVSGIDTV 691
VK++IL+T ++KLK QH+KVL+T+KLEV+P D+ ++HFELH +KN LP ++V GI TV
Sbjct: 1144 IVKEAILRTPRIKLKPQHIKVLDTRKLEVIPLGDRERVHFELHNLKNLLPSIIVQGIKTV 1203
Query: 690 ERVII--NKED---KEKEMPKYNLFVEGMGLLGVMGTEGVNGCETKSNHIMEVLRTLGIE 526
ER +I K D ++E+P YN+ VEGMGL VMGTEGV+GC+T SNH+MEV + LGIE
Sbjct: 1204 ERAVIAQKKHDGKANDQELPTYNMLVEGMGLDLVMGTEGVDGCKTTSNHVMEVQKFLGIE 1263
Query: 525 AARSAIIDEIQTTMSSHGMTIDIRHMMLLADLMTSKGEVLGITRTGVQKMKDSVLMLASF 346
AAR IIDEI TM HGM+IDIRHMMLL DLMT KGEVLGITR G+QKM SVLMLASF
Sbjct: 1264 AARKCIIDEINQTMEHHGMSIDIRHMMLLGDLMTFKGEVLGITRFGIQKMDKSVLMLASF 1323
Query: 345 EKTADHLFSAAVNGREDKIEGVSECIIMGIPMQMGTGMLKVRQRMQQQEVKLNYALDPII 166
EKTADHL+ AAV GR+DKIEGVSECIIMGIPMQ+GTG+LKV+QR+ V LNY D II
Sbjct: 1324 EKTADHLYHAAVFGRDDKIEGVSECIIMGIPMQIGTGILKVQQRVDPPPV-LNYGSDSII 1382
Query: 165 S 163
S
Sbjct: 1383 S 1383
>gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao]
Length = 1395
Score = 468 bits (1205), Expect = e-129
Identities = 247/363 (68%), Positives = 297/363 (81%), Gaps = 7/363 (1%)
Frame = -2
Query: 1230 EAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIDAKKNISTPIITA 1051
EAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMN+T GVPRIKEII+A K ISTP+ITA
Sbjct: 1034 EAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINAAKRISTPVITA 1093
Query: 1050 KLEREYNPKEARIVKARIEKTLLSQVAKSIKIVMSARLASIVITLDIGMIQALRLHVDAY 871
+LE + NP A+IVK RIEKT+L QVAKSIKIV+++R AS+VITLD+ +I L++DA
Sbjct: 1094 ELEFDDNPNIAQIVKGRIEKTVLGQVAKSIKIVITSRSASVVITLDMEIILDAELYIDAN 1153
Query: 870 RVKQSILQTKKLKLKEQHVKVLNTQKLEVVPQADKSKLHFELHTIKNKLPMVVVSGIDTV 691
VK+SILQT K+KLKEQHVKVL+ +KLEVVP AD+S++HFELH++KN LP+VVV GI TV
Sbjct: 1154 IVKESILQTPKIKLKEQHVKVLDGRKLEVVPPADRSQIHFELHSLKNLLPLVVVKGIKTV 1213
Query: 690 ERVIINKEDKEKEMPK-------YNLFVEGMGLLGVMGTEGVNGCETKSNHIMEVLRTLG 532
ER ++ ++KEK+ K + L VEG GL VMG EG++G T SNH+ME+ + LG
Sbjct: 1214 ERTVVYDKNKEKKNQKEEETTKHFQLLVEGTGLQAVMGIEGIDGRRTWSNHVMEMEQILG 1273
Query: 531 IEAARSAIIDEIQTTMSSHGMTIDIRHMMLLADLMTSKGEVLGITRTGVQKMKDSVLMLA 352
IEAAR IIDEI TM HGMTID RHMMLLAD+MT +GEVLGITR G+QKM S+LMLA
Sbjct: 1274 IEAARKCIIDEIAQTMEHHGMTIDRRHMMLLADVMTFRGEVLGITRFGIQKMDKSILMLA 1333
Query: 351 SFEKTADHLFSAAVNGREDKIEGVSECIIMGIPMQMGTGMLKVRQRMQQQEVKLNYALDP 172
SFE+TADHLF+AAVNGR+DKIEGV+ECIIMGIPMQ+GTG+LKV QR+ + L Y DP
Sbjct: 1334 SFERTADHLFNAAVNGRDDKIEGVTECIIMGIPMQIGTGILKVIQRVDPPPM-LRYGPDP 1392
Query: 171 IIS 163
++S
Sbjct: 1393 VLS 1395
>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
sativus]
Length = 1400
Score = 455 bits (1170), Expect = e-125
Identities = 246/358 (68%), Positives = 287/358 (80%), Gaps = 2/358 (0%)
Frame = -2
Query: 1230 EAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIDAKKNISTPIITA 1051
EAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEII+ K ISTPI+TA
Sbjct: 1044 EAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIVTA 1103
Query: 1050 KLEREYNPKEARIVKARIEKTLLSQVAKSIKIVMSARLASIVITLDIGMIQALRLHVDAY 871
L + N AR+VKARIEKT L Q+AK I+IVMS+R A I I LD+ I+ L+VDA
Sbjct: 1104 ALTHDDNVNIARMVKARIEKTNLGQIAKCIQIVMSSRSALIEIKLDMEKIRDAELYVDAN 1163
Query: 870 RVKQSILQTKKLKLKEQHVKVLNTQKLEVVPQ-ADKSKLHFELHTIKNKLPMVVVSGIDT 694
VKQ+IL T KLKLK +H+ VL+ +KL V+PQ AD++KLHF LH +KN LP VVV GI T
Sbjct: 1164 VVKQAILVTPKLKLKHEHINVLDDRKLRVLPQDADRNKLHFNLHFLKNMLPGVVVKGIKT 1223
Query: 693 VERVIINKE-DKEKEMPKYNLFVEGMGLLGVMGTEGVNGCETKSNHIMEVLRTLGIEAAR 517
V R +I +E DK + K++L VEG GL VMGTEGV+GC TKSNHI+EV + LGIEAAR
Sbjct: 1224 VGRAVIKEEKDKARNAKKFSLLVEGTGLQAVMGTEGVDGCNTKSNHIIEVQQVLGIEAAR 1283
Query: 516 SAIIDEIQTTMSSHGMTIDIRHMMLLADLMTSKGEVLGITRTGVQKMKDSVLMLASFEKT 337
II+EI+ TM SHGM+IDIRHMMLL DLMT +GEVLGITR G+QKM SVLMLASFEKT
Sbjct: 1284 KCIIEEIKYTMESHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQKMDKSVLMLASFEKT 1343
Query: 336 ADHLFSAAVNGREDKIEGVSECIIMGIPMQMGTGMLKVRQRMQQQEVKLNYALDPIIS 163
ADHLF+A+VNGR+DKIEGVSEC+IMGIPM +GTGMLKVRQR+ + +L Y I+S
Sbjct: 1344 ADHLFNASVNGRDDKIEGVSECVIMGIPMPLGTGMLKVRQRVSVPQ-QLPYGPPAILS 1400
>gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis]
Length = 1179
Score = 451 bits (1161), Expect = e-124
Identities = 244/359 (67%), Positives = 295/359 (82%), Gaps = 3/359 (0%)
Frame = -2
Query: 1230 EAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIDAKKNISTPIITA 1051
EAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEII+ K ISTPIITA
Sbjct: 821 EAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKKISTPIITA 880
Query: 1050 KLEREYNPKEARIVKARIEKTLLSQVAKSIKIVMSARLASIVITLDIGMIQALRLHVDAY 871
LE + N ARIV+ RIEK L QVAKSIK VM++R+AS+VITLD+ IQ L +DA
Sbjct: 881 ILECDNNVNFARIVRGRIEKISLGQVAKSIKTVMTSRVASVVITLDMERIQDALLSIDAN 940
Query: 870 RVKQSILQTKKLKLKEQHVKVLNTQKLEVVP-QADKSKLHFELHTIKNKLPMVVVSGIDT 694
V+ SILQT ++KLK++H++VL+ +KLE++P ++++SKL+ L + L ++V GI T
Sbjct: 941 VVRDSILQTPRIKLKKEHIRVLDFKKLEILPYESNRSKLYHHLQFLAKMLQNILVKGIKT 1000
Query: 693 VERVIINKE-DKEKEMPK-YNLFVEGMGLLGVMGTEGVNGCETKSNHIMEVLRTLGIEAA 520
VER +I+ E DK+ ++ K Y L VEG GLLGVMGTEGV+G TK+NHI+EV +TLGIEAA
Sbjct: 1001 VERAVISSEKDKKTDISKKYKLLVEGTGLLGVMGTEGVDGRNTKTNHIIEVQQTLGIEAA 1060
Query: 519 RSAIIDEIQTTMSSHGMTIDIRHMMLLADLMTSKGEVLGITRTGVQKMKDSVLMLASFEK 340
R+ IIDEI+ TM SHGM+ID RHMMLLAD+MTS+GEVLGITR G+QKM SVLMLASFEK
Sbjct: 1061 RTCIIDEIEYTMKSHGMSIDTRHMMLLADVMTSRGEVLGITRFGIQKMDKSVLMLASFEK 1120
Query: 339 TADHLFSAAVNGREDKIEGVSECIIMGIPMQMGTGMLKVRQRMQQQEVKLNYALDPIIS 163
TADHLF+A+VNGREDKIEGVSECIIMGIPMQ+GTGM+KVRQR+ + L+Y PI+S
Sbjct: 1121 TADHLFNASVNGREDKIEGVSECIIMGIPMQIGTGMIKVRQRVDVPPM-LSYGPKPILS 1178
>ref|XP_002300065.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|222847323|gb|EEE84870.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 1394
Score = 448 bits (1153), Expect = e-123
Identities = 235/344 (68%), Positives = 281/344 (81%), Gaps = 5/344 (1%)
Frame = -2
Query: 1230 EAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIDAKKNISTPIITA 1051
E GTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMN+T GVPRIKEII+ K ISTPIIT
Sbjct: 1051 EPGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITV 1110
Query: 1050 KLEREYNPKEARIVKARIEKTLLSQVAKSIKIVMSARLASIVITLDIGMIQALRLHVDAY 871
+LE N ARI+K RI+KT+L QVAKSIKIVM++R AS+ +TLD+ I+ +L +DA
Sbjct: 1111 ELEHNSNVNAARIIKGRIQKTVLGQVAKSIKIVMTSRSASVKVTLDMKTIREAQLSLDAN 1170
Query: 870 RVKQSILQTKKLKLKEQHVKVLNTQKLEVVPQADKSKLHFELHTIKNKLPMVVVSGIDTV 691
V++ IL+T K+K K Q + VL KLEV P D++KLHFELH++KN LP VVV GI TV
Sbjct: 1171 IVRELILETPKIKRKLQRINVLEDGKLEVFPGGDRNKLHFELHSLKNMLPAVVVKGIKTV 1230
Query: 690 ERVIINK---EDKEKEM--PKYNLFVEGMGLLGVMGTEGVNGCETKSNHIMEVLRTLGIE 526
ERV+I + +D E + PKYN+FVEGMGL VMGTEGV+G +TKSNHI+EV TLGIE
Sbjct: 1231 ERVVIAQKKLDDAENDQGGPKYNMFVEGMGLQAVMGTEGVDGRKTKSNHIIEVQETLGIE 1290
Query: 525 AARSAIIDEIQTTMSSHGMTIDIRHMMLLADLMTSKGEVLGITRTGVQKMKDSVLMLASF 346
AAR IIDEI+ TM SHGM+IDIRHMMLLAD+MTS+G VLGITR G+QKM SVLMLASF
Sbjct: 1291 AARKCIIDEIKGTMESHGMSIDIRHMMLLADVMTSRGVVLGITRFGIQKMDKSVLMLASF 1350
Query: 345 EKTADHLFSAAVNGREDKIEGVSECIIMGIPMQMGTGMLKVRQR 214
EKT+DHLF+A+V G++DKIEGVSECIIMGIP+ +GTG+LK++QR
Sbjct: 1351 EKTSDHLFNASVKGKDDKIEGVSECIIMGIPVAIGTGVLKIQQR 1394
>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Setaria
italica]
Length = 1397
Score = 435 bits (1118), Expect = e-119
Identities = 231/357 (64%), Positives = 279/357 (78%), Gaps = 1/357 (0%)
Frame = -2
Query: 1230 EAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIDAKKNISTPIITA 1051
EAG +IGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEII+A K ISTPIIT
Sbjct: 1042 EAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKISTPIITT 1101
Query: 1050 KLEREYNPKEARIVKARIEKTLLSQVAKSIKIVMSARLASIVITLDIGMIQALRLHVDAY 871
+L + ARIVK +EK +L +VA +IKIV+ + ++V+ LD+ +I+AL + + A
Sbjct: 1102 ELLSRKDVLSARIVKGAMEKAVLGEVASAIKIVLKSSQPNLVVKLDMQLIEALHMGISAD 1161
Query: 870 RVKQSILQTKKLKLKEQHVKVLNTQKLEVVPQA-DKSKLHFELHTIKNKLPMVVVSGIDT 694
V+ SIL K+KLK +HV+V++ KL + P DKSKL ELH +K LP V+V GI T
Sbjct: 1162 SVQLSILNHPKIKLKSEHVRVIDRAKLRIYPAGTDKSKLQLELHNLKAMLPKVIVKGIPT 1221
Query: 693 VERVIINKEDKEKEMPKYNLFVEGMGLLGVMGTEGVNGCETKSNHIMEVLRTLGIEAARS 514
VERV+I++ KE ++ KYNL VEG LL VMGT GV+ TKSNHIME+ TLGIEAAR
Sbjct: 1222 VERVVIDERKKEGKLEKYNLLVEGTNLLAVMGTPGVDARNTKSNHIMEMNSTLGIEAARR 1281
Query: 513 AIIDEIQTTMSSHGMTIDIRHMMLLADLMTSKGEVLGITRTGVQKMKDSVLMLASFEKTA 334
+IIDEIQ TM SHGM ID+RHMMLLADLMT KGEVLGITR G+ KMK SVLMLASFEKT+
Sbjct: 1282 SIIDEIQYTMKSHGMNIDVRHMMLLADLMTYKGEVLGITRYGIAKMKTSVLMLASFEKTS 1341
Query: 333 DHLFSAAVNGREDKIEGVSECIIMGIPMQMGTGMLKVRQRMQQQEVKLNYALDPIIS 163
+HLF+A+ +GRED+IEGVSECIIMGIPMQ+GTG+LKVRQR+ +L Y DPI+S
Sbjct: 1342 EHLFNASYSGREDEIEGVSECIIMGIPMQLGTGILKVRQRLDHLP-ELKYQPDPILS 1397
>gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlisea aurea]
Length = 1368
Score = 430 bits (1106), Expect = e-118
Identities = 230/341 (67%), Positives = 270/341 (79%), Gaps = 3/341 (0%)
Frame = -2
Query: 1230 EAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIDAKKNISTPIITA 1051
E GTA+GAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRI+EIIDA K I TP+IT
Sbjct: 1028 ECGTAVGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIREIIDAAKKIKTPVITT 1087
Query: 1050 KLEREYNPKEARIVKARIEKTLLSQVAKSIKIVMSARLASIVITLDIGMIQALRLHVDAY 871
+L+R+ ARIVK RIEKTLL ++AKS+K+ R ASIVI LD +I+A +L +DAY
Sbjct: 1088 ELQRKDCGITARIVKGRIEKTLLGEIAKSMKVSEMTRTASIVIKLDTKVIEAAQLFIDAY 1147
Query: 870 RVKQSILQTKKLKLKEQHVKVLNTQKLEVVPQADKSKLHFELHTIKNKLPMVVVSGIDTV 691
VK+SIL T K+KLKEQ ++VLN QKL V +A++SKL FE ++NKL VVV GI V
Sbjct: 1148 TVKESILLTPKMKLKEQQIRVLNRQKLTVSLEAERSKLEFESWALQNKLKDVVVKGIKQV 1207
Query: 690 ERVIINKEDKEK---EMPKYNLFVEGMGLLGVMGTEGVNGCETKSNHIMEVLRTLGIEAA 520
ER II E K + K L VEG G L V+G +GV+ TKSNHIMEV + LGIE+A
Sbjct: 1208 ERAIIVDEANGKDPNQRKKLKLVVEGTGFLSVLGIQGVDARNTKSNHIMEVFQVLGIESA 1267
Query: 519 RSAIIDEIQTTMSSHGMTIDIRHMMLLADLMTSKGEVLGITRTGVQKMKDSVLMLASFEK 340
R IIDEIQ TMS HGMTIDIRHMMLLADLMT KGEVLGITR GV+KM+DSVLMLASFE+
Sbjct: 1268 RRQIIDEIQYTMSGHGMTIDIRHMMLLADLMTFKGEVLGITRYGVRKMRDSVLMLASFER 1327
Query: 339 TADHLFSAAVNGREDKIEGVSECIIMGIPMQMGTGMLKVRQ 217
TADHLF+A VNGR D+IEGVSECI++GIPM+ GTGM+K++Q
Sbjct: 1328 TADHLFNAPVNGRVDRIEGVSECIMLGIPMRTGTGMMKIKQ 1368
>gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japonica Group]
Length = 1321
Score = 428 bits (1101), Expect = e-117
Identities = 229/357 (64%), Positives = 280/357 (78%), Gaps = 1/357 (0%)
Frame = -2
Query: 1230 EAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIDAKKNISTPIITA 1051
EAG +IGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEII+A K ISTPIITA
Sbjct: 967 EAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKISTPIITA 1026
Query: 1050 KLEREYNPKEARIVKARIEKTLLSQVAKSIKIVMSARLASIVITLDIGMIQALRLHVDAY 871
+L E + ARIVK +EK +L +VA++IKIV+ + ++V+ LD+ I+AL + + A
Sbjct: 1027 ELLSEKDVLSARIVKGSMEKAVLGEVAEAIKIVLKSSQPNLVVKLDMQRIEALHMGISAD 1086
Query: 870 RVKQSILQTKKLKLKEQHVKVLNTQKLEVVPQA-DKSKLHFELHTIKNKLPMVVVSGIDT 694
V+ SIL K+KLK +HV+V++ KL + P DKSKL +ELH +K+ LP V+V GI T
Sbjct: 1087 SVQLSILNHPKIKLKSEHVRVIDKSKLRIYPAGIDKSKLLYELHHLKSMLPKVIVKGIPT 1146
Query: 693 VERVIINKEDKEKEMPKYNLFVEGMGLLGVMGTEGVNGCETKSNHIMEVLRTLGIEAARS 514
VER +I++ +E + +Y L VEG LL VMGT GV+ +TKSNHIMEV RTLGIEAAR
Sbjct: 1147 VERAVISETGEENDK-RYKLLVEGTNLLAVMGTPGVDAMKTKSNHIMEVNRTLGIEAARR 1205
Query: 513 AIIDEIQTTMSSHGMTIDIRHMMLLADLMTSKGEVLGITRTGVQKMKDSVLMLASFEKTA 334
+IIDEIQ TM SHGM ID RHMMLLADLMT KGE+LGITR G+ KMK SVLMLASFEKTA
Sbjct: 1206 SIIDEIQYTMKSHGMNIDSRHMMLLADLMTYKGEILGITRYGIAKMKSSVLMLASFEKTA 1265
Query: 333 DHLFSAAVNGREDKIEGVSECIIMGIPMQMGTGMLKVRQRMQQQEVKLNYALDPIIS 163
+HLF+A+ +GRED+IEGVSECIIMGIPMQ+GTG+LKVRQR+ + Y DPI++
Sbjct: 1266 EHLFNASYSGREDQIEGVSECIIMGIPMQLGTGILKVRQRLDHLP-EFKYQPDPILA 1321
>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
Japonica Group] gi|38347455|emb|CAD41360.2|
OSJNBa0076N16.24 [Oryza sativa Japonica Group]
gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
Japonica Group] gi|116310339|emb|CAH67354.1|
OSIGBa0130B08.14 [Oryza sativa Indica Group]
gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218195112|gb|EEC77539.1| hypothetical protein
OsI_16437 [Oryza sativa Indica Group]
Length = 1383
Score = 428 bits (1101), Expect = e-117
Identities = 229/357 (64%), Positives = 280/357 (78%), Gaps = 1/357 (0%)
Frame = -2
Query: 1230 EAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIDAKKNISTPIITA 1051
EAG +IGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEII+A K ISTPIITA
Sbjct: 1029 EAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKISTPIITA 1088
Query: 1050 KLEREYNPKEARIVKARIEKTLLSQVAKSIKIVMSARLASIVITLDIGMIQALRLHVDAY 871
+L E + ARIVK +EK +L +VA++IKIV+ + ++V+ LD+ I+AL + + A
Sbjct: 1089 ELLSEKDVLSARIVKGSMEKAVLGEVAEAIKIVLKSSQPNLVVKLDMQRIEALHMGISAD 1148
Query: 870 RVKQSILQTKKLKLKEQHVKVLNTQKLEVVPQA-DKSKLHFELHTIKNKLPMVVVSGIDT 694
V+ SIL K+KLK +HV+V++ KL + P DKSKL +ELH +K+ LP V+V GI T
Sbjct: 1149 SVQLSILNHPKIKLKSEHVRVIDKSKLRIYPAGIDKSKLLYELHHLKSMLPKVIVKGIPT 1208
Query: 693 VERVIINKEDKEKEMPKYNLFVEGMGLLGVMGTEGVNGCETKSNHIMEVLRTLGIEAARS 514
VER +I++ +E + +Y L VEG LL VMGT GV+ +TKSNHIMEV RTLGIEAAR
Sbjct: 1209 VERAVISETGEENDK-RYKLLVEGTNLLAVMGTPGVDAMKTKSNHIMEVNRTLGIEAARR 1267
Query: 513 AIIDEIQTTMSSHGMTIDIRHMMLLADLMTSKGEVLGITRTGVQKMKDSVLMLASFEKTA 334
+IIDEIQ TM SHGM ID RHMMLLADLMT KGE+LGITR G+ KMK SVLMLASFEKTA
Sbjct: 1268 SIIDEIQYTMKSHGMNIDSRHMMLLADLMTYKGEILGITRYGIAKMKSSVLMLASFEKTA 1327
Query: 333 DHLFSAAVNGREDKIEGVSECIIMGIPMQMGTGMLKVRQRMQQQEVKLNYALDPIIS 163
+HLF+A+ +GRED+IEGVSECIIMGIPMQ+GTG+LKVRQR+ + Y DPI++
Sbjct: 1328 EHLFNASYSGREDQIEGVSECIIMGIPMQLGTGILKVRQRLDHLP-EFKYQPDPILA 1383
>ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Glycine
max]
Length = 1391
Score = 427 bits (1097), Expect = e-117
Identities = 230/358 (64%), Positives = 280/358 (78%), Gaps = 2/358 (0%)
Frame = -2
Query: 1230 EAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIDAKKNISTPIITA 1051
EAG +GA GA SIGEPGTQMTLKTFHFAGVASMNVTLGVPR+KEI++ K ISTPIITA
Sbjct: 1039 EAGAPVGATGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRVKEIMNGNKKISTPIITA 1098
Query: 1050 KLEREYNPKEARIVKARIEKTLLSQVAKSIKIVMSARLASIVITLDIGMIQALRLHVDAY 871
LER+ N ARIVK RIEKT L QVAKSIK+VM++R AS+VITLD+ IQ L++DA
Sbjct: 1099 ILERDDNANTARIVKGRIEKTNLGQVAKSIKVVMTSRSASVVITLDMKRIQDAHLNIDAN 1158
Query: 870 RVKQSILQTKKLKLKEQHVKVLNTQKLEVVPQ-ADKSKLHFELHTIKNKLPMVVVSGIDT 694
VK+SIL+TKK KLK +H+K+L+ +KLEVVPQ D+SK+HF+LH +KN LP VVV GI T
Sbjct: 1159 IVKESILRTKKTKLKPEHIKILDIKKLEVVPQDVDRSKIHFQLHYLKNLLPTVVVKGIKT 1218
Query: 693 VERVIINKEDKEKEMPKYNLFVEGMGLLGVMGTEGVNGCETKSNHIMEVLRTLGIEAARS 514
V+RV+I+K+ K + K+ L VEG G VMG EG++G +T SNHI EV TLGIEAAR
Sbjct: 1219 VDRVVISKDTKAE---KFRLLVEGTGFREVMGVEGIDGRKTVSNHIHEVRDTLGIEAARE 1275
Query: 513 AIIDEIQTTM-SSHGMTIDIRHMMLLADLMTSKGEVLGITRTGVQKMKDSVLMLASFEKT 337
+I+ EI+ TM +HGM IDIRHMMLLAD+MT+ G +LGI R G+ KM SVLMLASFE+T
Sbjct: 1276 SIVKEIKYTMVDTHGMNIDIRHMMLLADMMTATGHILGINRFGISKMGKSVLMLASFERT 1335
Query: 336 ADHLFSAAVNGREDKIEGVSECIIMGIPMQMGTGMLKVRQRMQQQEVKLNYALDPIIS 163
AD LF A+V GR+D I GVSE IIMGIP+Q+GTGM+KV+QR+ E L + PI+S
Sbjct: 1336 ADILFQASVRGRDDSIGGVSESIIMGIPIQIGTGMIKVKQRLDPPE--LPHGTSPILS 1391
>ref|XP_004505924.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X2 [Cicer arietinum]
Length = 1291
Score = 425 bits (1093), Expect = e-116
Identities = 220/357 (61%), Positives = 287/357 (80%), Gaps = 1/357 (0%)
Frame = -2
Query: 1230 EAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIDAKKNISTPIITA 1051
EAGT IGAIGA SIGEPGTQMTLKTFHFAGVASMNVTLGVPRI EII+ K+I TPI+TA
Sbjct: 935 EAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIIEIINGAKDIKTPIMTA 994
Query: 1050 KLEREYNPKEARIVKARIEKTLLSQVAKSIKIVMSARLASIVITLDIGMIQALRLHVDAY 871
LER+ N AR+VK RIEKT L QVAKSIK+VM++R A++VI+LD+ IQ L++DA+
Sbjct: 995 ILERDDNANTARMVKGRIEKTNLGQVAKSIKVVMTSRSATVVISLDMERIQDAHLNIDAH 1054
Query: 870 RVKQSILQTKKLKLKEQHVKVLNTQKLEVVPQ-ADKSKLHFELHTIKNKLPMVVVSGIDT 694
VK+SIL+T KLKLK ++VKVL+ +KL+V P+ + ++++HF+L+ +KN LP VVV G+ T
Sbjct: 1055 TVKESILRTAKLKLKAENVKVLDIKKLQVYPRLSGRNEIHFQLNILKNLLPSVVVKGVKT 1114
Query: 693 VERVIINKEDKEKEMPKYNLFVEGMGLLGVMGTEGVNGCETKSNHIMEVLRTLGIEAARS 514
VER ++ + K+K++ K+ L VEG GL V+G EGV+G +T+SNH+ME+L LGIEAARS
Sbjct: 1115 VERAVLEIDKKDKKVEKFALLVEGTGLQQVLGIEGVDGRKTRSNHVMEMLNVLGIEAARS 1174
Query: 513 AIIDEIQTTMSSHGMTIDIRHMMLLADLMTSKGEVLGITRTGVQKMKDSVLMLASFEKTA 334
IID+IQ TM SHGM+ID+RH+MLLAD+MT +G+VLG+TR G+QKM SVLMLASFE +
Sbjct: 1175 TIIDQIQYTMGSHGMSIDVRHIMLLADIMTVRGQVLGMTRHGIQKMGRSVLMLASFESST 1234
Query: 333 DHLFSAAVNGREDKIEGVSECIIMGIPMQMGTGMLKVRQRMQQQEVKLNYALDPIIS 163
DHLF A++ GR D IEGVS+CIIMG P+++GTGM+ ++QR+ L +DPI+S
Sbjct: 1235 DHLFDASMRGRGDPIEGVSDCIIMGKPIRVGTGMIDIKQRLDPP--VLPKGIDPILS 1289
>ref|XP_004505923.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Cicer arietinum]
Length = 1399
Score = 425 bits (1093), Expect = e-116
Identities = 220/357 (61%), Positives = 287/357 (80%), Gaps = 1/357 (0%)
Frame = -2
Query: 1230 EAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIDAKKNISTPIITA 1051
EAGT IGAIGA SIGEPGTQMTLKTFHFAGVASMNVTLGVPRI EII+ K+I TPI+TA
Sbjct: 1043 EAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIIEIINGAKDIKTPIMTA 1102
Query: 1050 KLEREYNPKEARIVKARIEKTLLSQVAKSIKIVMSARLASIVITLDIGMIQALRLHVDAY 871
LER+ N AR+VK RIEKT L QVAKSIK+VM++R A++VI+LD+ IQ L++DA+
Sbjct: 1103 ILERDDNANTARMVKGRIEKTNLGQVAKSIKVVMTSRSATVVISLDMERIQDAHLNIDAH 1162
Query: 870 RVKQSILQTKKLKLKEQHVKVLNTQKLEVVPQ-ADKSKLHFELHTIKNKLPMVVVSGIDT 694
VK+SIL+T KLKLK ++VKVL+ +KL+V P+ + ++++HF+L+ +KN LP VVV G+ T
Sbjct: 1163 TVKESILRTAKLKLKAENVKVLDIKKLQVYPRLSGRNEIHFQLNILKNLLPSVVVKGVKT 1222
Query: 693 VERVIINKEDKEKEMPKYNLFVEGMGLLGVMGTEGVNGCETKSNHIMEVLRTLGIEAARS 514
VER ++ + K+K++ K+ L VEG GL V+G EGV+G +T+SNH+ME+L LGIEAARS
Sbjct: 1223 VERAVLEIDKKDKKVEKFALLVEGTGLQQVLGIEGVDGRKTRSNHVMEMLNVLGIEAARS 1282
Query: 513 AIIDEIQTTMSSHGMTIDIRHMMLLADLMTSKGEVLGITRTGVQKMKDSVLMLASFEKTA 334
IID+IQ TM SHGM+ID+RH+MLLAD+MT +G+VLG+TR G+QKM SVLMLASFE +
Sbjct: 1283 TIIDQIQYTMGSHGMSIDVRHIMLLADIMTVRGQVLGMTRHGIQKMGRSVLMLASFESST 1342
Query: 333 DHLFSAAVNGREDKIEGVSECIIMGIPMQMGTGMLKVRQRMQQQEVKLNYALDPIIS 163
DHLF A++ GR D IEGVS+CIIMG P+++GTGM+ ++QR+ L +DPI+S
Sbjct: 1343 DHLFDASMRGRGDPIEGVSDCIIMGKPIRVGTGMIDIKQRLDPP--VLPKGIDPILS 1397
>ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi|162691719|gb|EDQ78080.1|
predicted protein [Physcomitrella patens]
Length = 1397
Score = 424 bits (1091), Expect = e-116
Identities = 228/357 (63%), Positives = 275/357 (77%), Gaps = 1/357 (0%)
Frame = -2
Query: 1230 EAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIDAKKNISTPIITA 1051
E G A+GA+GAQSIGEPGTQMTLKTFHFAGVASMN+TLGVPRIKEII+A KNISTPIITA
Sbjct: 1047 EPGAAVGAVGAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKNISTPIITA 1106
Query: 1050 KLEREYNPKEARIVKARIEKTLLSQVAKSIKIVMSARLASIVITLDIGMIQALRLHVDAY 871
L + K ARIVK RIEKT L +VAKSIK V+ A A I + LD+ I AL+L +++
Sbjct: 1107 VLVSGNDEKAARIVKGRIEKTTLGEVAKSIKTVLRASQAIISVKLDMKRIDALQLDINSD 1166
Query: 870 RVKQSILQTKKLKLKEQHVKVLNTQKLEVVP-QADKSKLHFELHTIKNKLPMVVVSGIDT 694
V +I+QT K+KLK ++++++ KL V+P DK KL+F LH++ N LP V+V GI +
Sbjct: 1167 TVALAIVQTPKIKLKHVNIRIVDRDKLIVIPPDQDKGKLYFYLHSLCNMLPKVIVKGIPS 1226
Query: 693 VERVIINKEDKEKEMPKYNLFVEGMGLLGVMGTEGVNGCETKSNHIMEVLRTLGIEAARS 514
VER +INKE YNL VEG L VMG GVNG TKSNH++E +TLGIEAAR+
Sbjct: 1227 VERAVINKEKGV-----YNLLVEGTNLKAVMGISGVNGKLTKSNHVIEAEQTLGIEAARN 1281
Query: 513 AIIDEIQTTMSSHGMTIDIRHMMLLADLMTSKGEVLGITRTGVQKMKDSVLMLASFEKTA 334
IIDEIQ TM SHGMTID RHMMLLAD+MT KGEVLGITR G+ KMKDSVLMLASFEKT
Sbjct: 1282 VIIDEIQYTMGSHGMTIDARHMMLLADVMTYKGEVLGITRFGIAKMKDSVLMLASFEKTT 1341
Query: 333 DHLFSAAVNGREDKIEGVSECIIMGIPMQMGTGMLKVRQRMQQQEVKLNYALDPIIS 163
DHLF AA++GR DKIEGVSECIIMGIPM +GTG+ K+RQ++++ KL+Y P++S
Sbjct: 1342 DHLFDAAIHGRVDKIEGVSECIIMGIPMPIGTGLFKIRQKVEKLP-KLSYGPTPLLS 1397
>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
brachyantha]
Length = 1389
Score = 421 bits (1082), Expect = e-115
Identities = 227/357 (63%), Positives = 277/357 (77%), Gaps = 1/357 (0%)
Frame = -2
Query: 1230 EAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIDAKKNISTPIITA 1051
EAG +IGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEII+A K ISTPIITA
Sbjct: 1039 EAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKISTPIITA 1098
Query: 1050 KLEREYNPKEARIVKARIEKTLLSQVAKSIKIVMSARLASIVITLDIGMIQALRLHVDAY 871
+L + AR+VK +EK +L +VA+ IKIV+ + ++V+ LD+ I+ L + + A
Sbjct: 1099 ELLSGKDVLSARVVKGSMEKAVLGEVAEDIKIVLKSSQPNLVVKLDMQRIEDLHMGISAD 1158
Query: 870 RVKQSILQTKKLKLKEQHVKVLNTQKLEVVPQA-DKSKLHFELHTIKNKLPMVVVSGIDT 694
V+ SIL ++KLK +HV+V++ KL V P A DKSKL +ELH +K+ LP V+V GI T
Sbjct: 1159 SVQLSILNHPRIKLKSEHVRVIDKAKLRVYPTAIDKSKLLYELHNLKSMLPKVIVKGIPT 1218
Query: 693 VERVIINKEDKEKEMPKYNLFVEGMGLLGVMGTEGVNGCETKSNHIMEVLRTLGIEAARS 514
VER +I++ KY+L VEG LL VMGT GV+ +TKSNHIMEV RTLGIEAAR
Sbjct: 1219 VERAVISQTGD-----KYSLLVEGTNLLAVMGTPGVDAMKTKSNHIMEVNRTLGIEAARR 1273
Query: 513 AIIDEIQTTMSSHGMTIDIRHMMLLADLMTSKGEVLGITRTGVQKMKDSVLMLASFEKTA 334
+IIDEIQ TM+SHGM ID RHMMLLADLMT KGE+LGITR G+ KMK SVLMLASFEKTA
Sbjct: 1274 SIIDEIQYTMTSHGMNIDSRHMMLLADLMTYKGEILGITRYGIAKMKSSVLMLASFEKTA 1333
Query: 333 DHLFSAAVNGREDKIEGVSECIIMGIPMQMGTGMLKVRQRMQQQEVKLNYALDPIIS 163
+HLF+A+ +GRED+IEGVSECIIMGIPMQ+GTG+LKVRQR+ + Y DPI++
Sbjct: 1334 EHLFNASYSGREDQIEGVSECIIMGIPMQLGTGILKVRQRLDHLP-EFKYQPDPILA 1389