BLASTX nr result

ID: Catharanthus23_contig00023324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00023324
         (706 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004287901.1| PREDICTED: uncharacterized protein LOC101303...    61   4e-07
gb|EMJ05340.1| hypothetical protein PRUPE_ppa022555mg [Prunus pe...    58   3e-06
ref|XP_002521599.1| conserved hypothetical protein [Ricinus comm...    57   6e-06

>ref|XP_004287901.1| PREDICTED: uncharacterized protein LOC101303064 [Fragaria vesca
           subsp. vesca]
          Length = 136

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 47/130 (36%), Positives = 69/130 (53%), Gaps = 11/130 (8%)
 Frame = -2

Query: 543 MLNAFRLLR---TPAPEITVLSPGFIVGKR-----FRQTAAA--GSLKSFDNKMAQEAHH 394
           M+NA R +R   T  P    L     +G++     FRQ +A    +    D +M + A H
Sbjct: 1   MINAIRSIRKQSTSLPITPSLRSSSYLGQKASRVGFRQASATTKSTEPESDPEMDENAAH 60

Query: 393 NPNLELGDTMS-SLGKEYAMRCEEEGFGGIYAKNHQKTPSKEDDNGEEDFSANAKAPSGS 217
           NP+++ GD MS S G+ YA RCE++GFGGIY  N  +T +K D   E+    N  A   +
Sbjct: 61  NPHIKSGDLMSHSFGEGYATRCEDDGFGGIYGGN--QTVAKADQ--EQLIHENHHAYDKT 116

Query: 216 GKNEVRYEEK 187
             +EV+ +EK
Sbjct: 117 QGSEVKEKEK 126


>gb|EMJ05340.1| hypothetical protein PRUPE_ppa022555mg [Prunus persica]
          Length = 124

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 44/127 (34%), Positives = 64/127 (50%), Gaps = 2/127 (1%)
 Frame = -2

Query: 543 MLNAFRLLRTPAPEITVLSPGFIVGKRFRQTAAAGSLKSFDNKMAQEAHHNPNLE-LGDT 367
           M++A R LRT +P   V       G RFRQ A   +    D K   +   NPN +  GD 
Sbjct: 1   MIHAIRSLRTQSPSNLVQKAS---GVRFRQNATIST--DPDTKHNMDKTQNPNQQKTGDA 55

Query: 366 MS-SLGKEYAMRCEEEGFGGIYAKNHQKTPSKEDDNGEEDFSANAKAPSGSGKNEVRYEE 190
           MS S G+ YA R +EEGFGG+++ N     +++D    E+  A  K       +EV+ +E
Sbjct: 56  MSHSFGEGYATRSDEEGFGGVFSGNQSLPKTQQDQLIHENHPAYDKTQG----SEVKEKE 111

Query: 189 KDGKQSK 169
           K   Q++
Sbjct: 112 KGRHQTQ 118


>ref|XP_002521599.1| conserved hypothetical protein [Ricinus communis]
           gi|223539277|gb|EEF40870.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 131

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 48/136 (35%), Positives = 63/136 (46%), Gaps = 8/136 (5%)
 Frame = -2

Query: 543 MLNAFRLLRTPAPEITVLSPGFIVGKRFRQ-TAAAGSLK------SFDNKMAQEAHHNPN 385
           M  A RL+RT  P    +   F   +   Q T+A G  K      + DNK   E   NPN
Sbjct: 1   MNQAIRLIRTQNPSAASIF-SFPSSRPINQGTSAVGFRKVTTFSSNPDNKHDMEKAQNPN 59

Query: 384 LELGDTMS-SLGKEYAMRCEEEGFGGIYAKNHQKTPSKEDDNGEEDFSANAKAPSGSGKN 208
            + GD MS S G+ YA R +EEGFGGIY  N      + D    ++   N  A   S  +
Sbjct: 60  EKTGDVMSHSFGEGYATRSDEEGFGGIYGGNQSVVKEETD----KEIHENHPAYDTSQGS 115

Query: 207 EVRYEEKDGKQSKVAS 160
           EV+ +EK   Q+   S
Sbjct: 116 EVKEKEKARHQTNAHS 131


Top