BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00022825
         (1325 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]   312   2e-93
emb|CAN73532.1| hypothetical protein VITISV_012827 [Vitis vinifera]   270   8e-70
emb|CAN63563.1| hypothetical protein VITISV_003097 [Vitis vinifera]   241   4e-61
emb|CAN75363.1| hypothetical protein VITISV_026292 [Vitis vinifera]   150   2e-43
gb|ABR16307.1| unknown [Picea sitchensis]                             178   4e-42
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]   164   6e-38
gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group...   164   6e-38
gb|AAD32906.1| putative retroelement pol polyprotein [Arabidopsi...   164   6e-38
dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsi...   160   3e-37
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   162   3e-37
gb|ABA99612.1| retrotransposon protein, putative, unclassified [...   162   3e-37
emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]   161   7e-37
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         160   9e-37
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   160   9e-37
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A...   160   1e-36
emb|CBI37296.3| unnamed protein product [Vitis vinifera]              159   2e-36
gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza...   159   2e-36
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]             158   6e-36
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...   158   6e-36
emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group]           157   7e-36

>emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]
          Length = 1300

 Score =  312 bits (799), Expect(3) = 2e-93
 Identities = 160/353 (45%), Positives = 211/353 (59%), Gaps = 2/353 (0%)
 Frame = -3

Query: 1095 PDDIKIYRNVKIISTPILEGEKQEFVYVMSVETAYIDKTRKKEITDLWHARFGHFSYXXX 916
            P D+K+Y +++++  P+++G + E VYVMS ETAY+DKTRK E  DLWH R  H SY   
Sbjct: 409  PQDVKVYHDLEVMEEPVIKGRRLESVYVMSAETAYVDKTRKNETADLWHMRLSHISYSKL 468

Query: 915  XXXXXXXXXXXLPNLEVRDETICAGCQNGKAHQVPYYESKFRARQPLELVHSDVFGPVRC 736
                       LP LEVR  TICA CQ GKAHQ+PY ESK++A+ PLEL+HSDVFGPV+ 
Sbjct: 469  TMMMKKSMLKGLPQLEVRKXTICAXCQYGKAHQLPYEESKWKAKGPLELIHSDVFGPVKQ 528

Query: 735  LSVGGARW*LSSKIIKGMCGHIL*KKNQKLLEYLSRSRKKLNGK*EEKFRCLRPDNKREF 556
             S+ G ++ ++                   ++  SR                     R +
Sbjct: 529  ASLSGMKYMVT------------------FIDDFSR---------------------RVY 549

Query: 555  ISQEFSEFLQENRKRRQLTCSKTPKQ--VAKRTNRQLAETC*SMLHAKNALPEYWD*CIR 382
            +   F    +        TC+ TP+Q  V +R NR LAE C SMLHAKN    +W   ++
Sbjct: 550  LQMSFFTSSENXEYAISFTCANTPQQNGVXERKNRHLAEICRSMLHAKNVPGXFWAEXMK 609

Query: 381  TTAHVINRMPQAKFILKSTLEKLWNIRPTVNHFRVFGSV*YVFVPDHLRMKFDKKAIRCI 202
            T A VINR+PQ +    S  EKLWNI+PTV++FRVFG V YVFVP+HLR K DKKA+RC+
Sbjct: 610  TAAFVINRLPQQRLNFSSPFEKLWNIKPTVSYFRVFGCVCYVFVPNHLRSKMDKKAVRCV 669

Query: 201  FVGYDSGRKGWRCSDPITGRCYVSRDVVFNEASSWWPLEKMRTEDIEKIEEKV 43
             VGYDS RK WRC DP TG+CY SR+VVF+E+SSWW  EK    D +  ++++
Sbjct: 670  LVGYDSQRKXWRCCDPTTGKCYTSRNVVFDESSSWWSSEKEILXDSBVFKDEL 722



 Score = 56.2 bits (134), Expect(3) = 2e-93
 Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 7/67 (10%)
 Frame = -1

Query: 1271 EYKGSRMVVTVHNTR-------DTVIVLRRNPHKVE*QNVMHLERIKKNLLSVLQLTTSD 1113
            EYKG  MVVT +N++       +TV+  + N + V  QNV H+  +KKNLLSV QLT+S 
Sbjct: 343  EYKGRHMVVTANNSKLPIAHIGNTVVSSQYNTNDVSLQNVYHVPGMKKNLLSVAQLTSSG 402

Query: 1112 IYVVFGP 1092
              V+FGP
Sbjct: 403  HSVLFGP 409



 Score = 24.3 bits (51), Expect(3) = 2e-93
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -2

Query: 1324 SGAANQMTGDVEKL 1283
            SG +N MTGD EKL
Sbjct: 325  SGCSNHMTGDKEKL 338


>emb|CAN73532.1| hypothetical protein VITISV_012827 [Vitis vinifera]
          Length = 1194

 Score =  270 bits (691), Expect = 8e-70
 Identities = 148/379 (39%), Positives = 208/379 (54%), Gaps = 2/379 (0%)
 Frame = -3

Query: 1173 HALGKDKEEFVVCVTTNNLRYLRGIRPDDIKIYRNVKIISTPILEGEKQEFVYVMSVETA 994
            H  G  K    V   T++  ++    P D+K+YR+++I+  P++   + E VYVMS ETA
Sbjct: 384  HVPGMKKNLLSVAQLTSSGHFVL-FGPQDVKVYRDLEIMEEPVIXRWRLESVYVMSAETA 442

Query: 993  YIDKTRKKEITDLWHARFGHFSYXXXXXXXXXXXXXXLPNLEVRDETICAGCQNGKAHQV 814
             +DKTRK E TDL H R  H SY              LP LEVR +TICAGC  GKAHQ+
Sbjct: 443  XVDKTRKNETTDLXHMRLSHVSYSKLTVMMKKSMLKGLPQLEVRKDTICAGCXYGKAHQL 502

Query: 813  PYYESKFRARQPLELVHSDVFGPVRCLSVGGARW*LS--SKIIKGMCGHIL*KKNQKLLE 640
            PY ESK++ + PLEL+HSDVFGPV+  S+ G ++  +      + +  H + +K++   +
Sbjct: 503  PYEESKWKTKGPLELIHSDVFGPVKXASLSGMKYMXTFIDDFSRYVWVHFMKEKSETFSK 562

Query: 639  YLSRSRKKLNGK*EEKFRCLRPDNKREFISQEFSEFLQENRKRRQLTCSKTPKQVAKRTN 460
            +    ++    + +++ RCLR DN  E                                 
Sbjct: 563  F-KEFKEMTEAEVDKRIRCLRXDNGGE--------------------------------- 588

Query: 459  RQLAETC*SMLHAKNALPEYWD*CIRTTAHVINRMPQAKFILKSTLEKLWNIRPTVNHFR 280
                    SMLH KN    +W   ++T A VINR+PQ +    S  EKLWNI+P V++FR
Sbjct: 589  --------SMLHXKNVPGRFWVEAMKTAAFVINRLPQQRLNFSSPFEKLWNIKPIVSYFR 640

Query: 279  VFGSV*YVFVPDHLRMKFDKKAIRCIFVGYDSGRKGWRCSDPITGRCYVSRDVVFNEASS 100
            VFG V Y FVP+H R K DKK +RC+ VGYDS  K WRC +P TG+ Y SR+VVF+E+SS
Sbjct: 641  VFGCVCYAFVPNHXRSKMDKKXVRCVLVGYDSQXKRWRCCNPTTGKYYTSRNVVFDESSS 700

Query: 99   WWPLEKMRTEDIEKIEEKV 43
            WW  EK    D +  ++++
Sbjct: 701  WWSSEKEILPDSDVFKDEL 719



 Score = 58.2 bits (139), Expect(2) = 3e-07
 Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 7/75 (9%)
 Frame = -1

Query: 1295 RRKVIYKMEYKGSRMVVTVHNTR-------DTVIVLRRNPHKVE*QNVMHLERIKKNLLS 1137
            + K+    EYKG  MVVT +N++       +TV+  + N + V  QNV H+  +KKNLLS
Sbjct: 335  KEKLXDLSEYKGRHMVVTXNNSKJPIAHIGNTVVSSQYNTNDVSLQNVYHVPGMKKNLLS 394

Query: 1136 VLQLTTSDIYVVFGP 1092
            V QLT+S  +V+FGP
Sbjct: 395  VAQLTSSGHFVLFGP 409



 Score = 24.3 bits (51), Expect(2) = 3e-07
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -2

Query: 1324 SGAANQMTGDVEKL 1283
            SG +N MTGD EKL
Sbjct: 325  SGCSNHMTGDKEKL 338


>emb|CAN63563.1| hypothetical protein VITISV_003097 [Vitis vinifera]
          Length = 1052

 Score =  241 bits (616), Expect = 4e-61
 Identities = 137/326 (42%), Positives = 188/326 (57%), Gaps = 5/326 (1%)
 Frame = -3

Query: 1173 HALGKDKEEFVVCVTTNNLRYLRGIRPDDIKIYRNVKIISTPILEGEKQEFVYVMSVETA 994
            H  G  K    V   T++  ++    P D+K+ R+++I+  P+++G + E +YVM VETA
Sbjct: 288  HVPGMKKNLLSVAQLTSSGHFVL-FSPQDVKVXRDLEIMEEPVIKGWRLESIYVMFVETA 346

Query: 993  YIDKTRKKEITDLWHARFGHFSYXXXXXXXXXXXXXXLPNLEVRDETICAGCQNGKAHQV 814
            Y+DKTRK EI DLWH R  H SY              LP LE            GKAHQ+
Sbjct: 347  YVDKTRKNEIADLWHMRLSHVSYSKLTVMMKKSMLKGLPQLE------------GKAHQL 394

Query: 813  PYYESKFRARQPLELVHSDVFGPVRCLSVGGARW*LSSKIIKGMCGHI---L*KKNQKLL 643
             Y ESK++A+ PLEL+HSDVFGPV+   + G ++ ++   I     ++     K+  +  
Sbjct: 395  SYEESKWKAKGPLELIHSDVFGPVKQAXLSGMKYMVT--FIDDFSRYVWVYFMKEKSETF 452

Query: 642  EYLSRSRKKLNGK*EEKFRCLRPDNKREFISQEFSEFLQENRKRRQLTCSKTPKQ--VAK 469
                  ++    + +++  CLR DN   + S EF  FL+E R R Q TC+ T +Q  VA+
Sbjct: 453  SKFKEFKEMTEIEVDKRIHCLRTDNGXXYTSNEFFYFLRECRVRHQFTCANTLQQNGVAE 512

Query: 468  RTNRQLAETC*SMLHAKNALPEYWD*CIRTTAHVINRMPQAKFILKSTLEKLWNIRPTVN 289
            R NR LAE C SMLHAKN    +W   ++T A VINR+PQ +    S  EKLWNI+PTV+
Sbjct: 513  RKNRHLAEICRSMLHAKNVPGRFWAEAMKTXAFVINRLPQQRLNFSSPFEKLWNIKPTVS 572

Query: 288  HFRVFGSV*YVFVPDHLRMKFDKKAI 211
            +FRVFG V YVFVP HLR K DKKA+
Sbjct: 573  YFRVFGCVCYVFVPKHLRNKMDKKAV 598


>emb|CAN75363.1| hypothetical protein VITISV_026292 [Vitis vinifera]
          Length = 1161

 Score =  150 bits (378), Expect(2) = 2e-43
 Identities = 76/134 (56%), Positives = 93/134 (69%), Gaps = 2/134 (1%)
 Frame = -3

Query: 606 K*EEKFRCLRPDNKREFISQEFSEFLQENRKRRQLTCSKTPKQ--VAKRTNRQLAETC*S 433
           K +++ RCLR DN  E+ S EF  FL+E R R Q TC+ TP+Q  VA+R NR LAE C S
Sbjct: 507 KVDKRIRCLRTDNGGEYTSDEFFYFLRECRVRHQFTCANTPQQNSVAERKNRHLAEICRS 566

Query: 432 MLHAKNALPEYWD*CIRTTAHVINRMPQAKFILKSTLEKLWNIRPTVNHFRVFGSV*YVF 253
           MLHAKN    +W   ++T A VINR+PQ K    S  EKLWNI+PT+++FRVFG V YVF
Sbjct: 567 MLHAKNVPRRFWAEAMKTVAFVINRLPQQKLNFSSPFEKLWNIKPTISYFRVFGCVCYVF 626

Query: 252 VPDHLRMKFDKKAI 211
           VP+HLR K DKK I
Sbjct: 627 VPNHLRSKMDKKEI 640



 Score = 54.3 bits (129), Expect(2) = 2e-43
 Identities = 24/45 (53%), Positives = 32/45 (71%)
 Frame = -2

Query: 715 VVTFIENY*RYVWAYFMKEKSETFGIFKSFKEEVEREIGRKISML 581
           +VTFI ++  YVW YFMKEKSETF  +K FKE  E ++ ++I  L
Sbjct: 471 MVTFINDFSNYVWVYFMKEKSETFSKYKEFKEMTEVKVDKRIRCL 515



 Score = 56.6 bits (135), Expect(2) = 1e-06
 Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 7/75 (9%)
 Frame = -1

Query: 1295 RRKVIYKMEYKGSRMVVTVHNTR-------DTVIVLRRNPHKVE*QNVMHLERIKKNLLS 1137
            + K+    EYKG  MVVT +N++       +TV+  + N + V  QNV H+  +KKNLLS
Sbjct: 335  KEKLXDLXEYKGRHMVVTXNNSKLPIAHIGNTVVSSQYNTNDVSLQNVYHVXGMKKNLLS 394

Query: 1136 VLQLTTSDIYVVFGP 1092
            + QLT+S   V+FGP
Sbjct: 395  IAQLTSSGXSVLFGP 409



 Score = 24.3 bits (51), Expect(2) = 1e-06
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -2

Query: 1324 SGAANQMTGDVEKL 1283
            SG +N MTGD EKL
Sbjct: 325  SGCSNHMTGDKEKL 338


>gb|ABR16307.1| unknown [Picea sitchensis]
          Length = 407

 Score =  178 bits (452), Expect = 4e-42
 Identities = 108/330 (32%), Positives = 174/330 (52%), Gaps = 6/330 (1%)
 Frame = -3

Query: 1080 IYRNVKIISTPILEGEKQEFVYVMSVETAYIDKTRKKEITDLWHARFGHFSYXXXXXXXX 901
            I  N K++++  +E    +F    S E A + +     ++ LWH R GH +Y        
Sbjct: 35   INSNYKVVASGYVENGLYKFGRFTSNEKALVAEV--DNVSRLWHERMGHLNYKSLSLMKR 92

Query: 900  XXXXXXLPNLEVRDETICAGCQNGKAHQVPYYESK-FRARQPLELVHSDVFGPVRCLSVG 724
                  LP +  + + +C GC +GK H   + + K +RA+ PL LVHSD+ GP+   S+ 
Sbjct: 93   FEMVYGLPKIS-QSQGVCEGCMSGKQHMEKFIKGKSWRAKTPLHLVHSDLMGPLEHPSIS 151

Query: 723  GARW*LS--SKIIKGMCGHIL*KKNQKLLEYLSRSRKKLNGK*EEKFRCLRPDNKREFIS 550
            G+R+ L+      + +  + L K   ++ E     +  +  +  +  + LR DN +E+++
Sbjct: 152  GSRYVLTFIDDYSRRIWVYFL-KNKDEVFEKFKEFKAFVEKQSGKSIKILRTDNGKEYVN 210

Query: 549  QEFSEFLQENRKRRQLTCSKTPKQ--VAKRTNRQLAETC*SMLHAKNALPEYWD*CIRTT 376
            +EF  + + N  +R+ T   TP+Q  VA+R NR L E    MLHA+N  P++W   I T 
Sbjct: 211  KEFDHYCKYNGIKREHTVPYTPQQNGVAERKNRTLMEMARCMLHARNMDPKFWAEAINTA 270

Query: 375  AHVINRMPQAKFILKSTLEKLWNIR-PTVNHFRVFGSV*YVFVPDHLRMKFDKKAIRCIF 199
             +++NR P    +   T E+ W+ R PTV+HF+VFG   YV +PD  R K D+K+ +CI 
Sbjct: 271  TYIVNRTPTIA-VKHKTPEEAWSRRKPTVSHFKVFGCDVYVHIPDEKRKKLDRKSHKCIM 329

Query: 198  VGYDSGRKGWRCSDPITGRCYVSRDVVFNE 109
            VGY    K +R  DP      + RDV+F+E
Sbjct: 330  VGYSETSKAYRVYDPEKNEILIRRDVIFDE 359


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score =  164 bits (416), Expect = 6e-38
 Identities = 101/329 (30%), Positives = 170/329 (51%), Gaps = 12/329 (3%)
 Frame = -3

Query: 963  TDLWHARFGHFSYXXXXXXXXXXXXXXLPNLEVRDETICAGCQNGKAHQVPYYESKFR-A 787
            ++LWH R+GH +               LP ++     +C GC  GK  + P+ + + R A
Sbjct: 422  SNLWHLRYGHLNVKGLKLLSKKEMVFGLPKID--SVNVCEGCIYGKQSKKPFPKGRSRRA 479

Query: 786  RQPLELVHSDVFGPVRCLSVGGARW*LS-SKIIKGMCGHIL*KKNQKLLEYLSRSRKKLN 610
               LE++H+D+ GP++  S GG+R+ L  +     M      +   +  E   + +  + 
Sbjct: 480  SSCLEIIHADLCGPMQTASFGGSRYFLLFTDDHSRMSWVYFLQSKAETFETFKKFKAFVE 539

Query: 609  GK*EEKFRCLRPDNKREFISQEFSEFLQENRKRRQLTCSKTPKQ--VAKRTNRQLAETC* 436
             +  +  + LR D   EF+S +F  F +E    R+LT   +P Q  VA+R NR + E   
Sbjct: 540  KQSGKCIKVLRTDRGGEFLSNDFKVFXEEEGLHRELTTPYSPXQNGVAERKNRTVVEMAR 599

Query: 435  SMLHAKNALPEYWD*CIRTTAHVINRMPQAKFILKSTLEKLWNIRPTVNHFRVFGSV*YV 256
            SM+ AKN    +W   + T  +++N  P    + ++  E  +  +P V+H +VFGSV Y 
Sbjct: 600  SMMKAKNLSNHFWAEGVATAVYLLNISPTKAVLNRTPYEAWYGRKPWVSHLKVFGSVAYT 659

Query: 255  FVPDHLRMKFDKKAIRCIFVGYDSGRKGWRCSDPITGRCYVSRDVVFNEASSW-WP---- 91
             +  H R K D+K+++CIF+GY S  KG++  +P++G+  VSR+VVF+E +SW W     
Sbjct: 660  LIDSHNRSKLDEKSVKCIFIGYCSQSKGYKLYNPVSGKIIVSRNVVFDEKASWTWRVSED 719

Query: 90   ---LEKMRTEDIEKIEEKVPLVQTIATDP 13
               +E     ++ + E++ P  Q  ATDP
Sbjct: 720  GALVEISSESEVAQSEDQQPSXQIPATDP 748


>gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108711922|gb|ABF99717.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1335

 Score =  164 bits (416), Expect = 6e-38
 Identities = 98/296 (33%), Positives = 151/296 (51%), Gaps = 5/296 (1%)
 Frame = -3

Query: 969  EITDLWHARFGHFSYXXXXXXXXXXXXXXLPNLEVRDETICAGCQNGKAHQVPY-YESKF 793
            +I+DLWH R GH +Y              LP + ++ +  C GC  GK  +  + +   +
Sbjct: 453  DISDLWHKRMGHLNYRALKLLRTKGMVQGLPFITLKSDP-CEGCVFGKQIRASFPHSGAW 511

Query: 792  RARQPLELVHSDVFGPVRCLSVGGARW*LSSKI--IKGMCGHIL*KKNQKLLEYLSRSRK 619
            RA  PLELVH+D+ G V  +S GG  W   + I     M      K+    LE   + + 
Sbjct: 512  RASAPLELVHADIVGKVPTISEGG-NWYFITFIDDYTRMIWVYFLKEKSAALEIFKKFKA 570

Query: 618  KLNGK*EEKFRCLRPDNKREFISQEFSEFLQENRKRRQLTCSKTPKQ--VAKRTNRQLAE 445
             +  +   K + LR D  RE+IS+EF ++ +    RRQLT   + +Q  VA+R NR + +
Sbjct: 571  MVENQSNRKIKVLRSDQGREYISKEFEKYCENAGIRRQLTAGYSAQQNGVAERKNRTIND 630

Query: 444  TC*SMLHAKNALPEYWD*CIRTTAHVINRMPQAKFILKSTLEKLWNIRPTVNHFRVFGSV 265
               SML  K     +W   + T  +++NR P      ++  E  +  +P + H RVFG +
Sbjct: 631  MANSMLQDKGMPKSFWAEAVNTAVYILNRSPTKAVTNRTPFEAWYGKKPVIGHMRVFGCI 690

Query: 264  *YVFVPDHLRMKFDKKAIRCIFVGYDSGRKGWRCSDPITGRCYVSRDVVFNEASSW 97
             Y  VP   R+KFD K+ RCIFVGY  G KG+R  +    +  +SRD +F+E+++W
Sbjct: 691  CYAQVPAQKRVKFDNKSDRCIFVGYADGIKGYRLYNLEKKKIIISRDAIFDESATW 746


>gb|AAD32906.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 822

 Score =  164 bits (416), Expect = 6e-38
 Identities = 107/312 (34%), Positives = 166/312 (53%), Gaps = 5/312 (1%)
 Frame = -3

Query: 1017 YVMSVETAYIDKTRKKEITDLWHARFGHFSYXXXXXXXXXXXXXXLPNLEVRDETICAGC 838
            ++ + ETA +    K E T+LWH R GH  +              LP   V +E  C  C
Sbjct: 142  WLSNEETAMV---AKDEATELWHKRLGHTGHSNLKILQSKEMVTGLPKFNV-EEGKCESC 197

Query: 837  QNGKAHQVPY-YESKFRARQPLELVHSDVFGPVRCLSVGGARW*LS--SKIIKGMCGHIL 667
               K  + P+  ES+ RA+  LEL+HSDV GP++  S+ G+R+ L+      + +  + L
Sbjct: 198  ILSKHSRDPFPKESETRAKHKLELIHSDVCGPMQNSSINGSRYILTFIDDATRMVWVYFL 257

Query: 666  *KKNQKLLEYLSRSRKKLNGK*EEKFRCLRPDNKREFISQEFSEFLQENRKRRQLTCSKT 487
             K   ++ +   + +  +      + + LR D   E++S+EFSEFL+ N   RQLT + +
Sbjct: 258  -KAKSEVFQTFKKFKNLVENNANCRIKKLRIDRGTEYLSKEFSEFLEGNGIERQLTAAYS 316

Query: 486  PKQ--VAKRTNRQLAETC*SMLHAKNALPEYWD*CIRTTAHVINRMPQAKFILKSTLEKL 313
            P+Q  V++R NR L E   +M+ AK+   + W   +   A+  NR P      K+ LE  
Sbjct: 317  PQQNEVSERRNRSLVEMARAMIKAKDLPLKLWAEAVHVAAYAQNRTPTRTLKNKTPLEAW 376

Query: 312  WNIRPTVNHFRVFGSV*YVFVPDHLRMKFDKKAIRCIFVGYDSGRKGWRCSDPITGRCYV 133
             + +P+V+H +VFGS+ YV +PD  R K+D K+ R IFVGY S  KG+R       +  +
Sbjct: 377  SDSKPSVSHMKVFGSICYVHIPDEKRRKWDDKSKRAIFVGYSSQTKGYRVYLLKENKIDI 436

Query: 132  SRDVVFNEASSW 97
            SRDV+F+E S W
Sbjct: 437  SRDVIFDEDSKW 448


>dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsis thaliana]
          Length = 1499

 Score =  160 bits (404), Expect(2) = 3e-37
 Identities = 105/318 (33%), Positives = 164/318 (51%), Gaps = 5/318 (1%)
 Frame = -3

Query: 1020 VYVMSVETAYIDKTRKKEITDLWHARFGHFSYXXXXXXXXXXXXXXLPNLEVRDETICAG 841
            ++  S E  Y+    K+E TDLWH RFGH +Y              LP  EV  + ICA 
Sbjct: 435  IWKKSREETYMAFEEKEEQTDLWHKRFGHVNYDKIETMQTLKIVEKLPKFEVI-KGICAA 493

Query: 840  CQNGKAHQVPY-YESKFRARQPLELVHSDVFGPVRCLSVGGARW*LSS-KIIKGMCGHIL 667
            C+ GK  +  +  +S+    + LEL+HSDV GP++  S+ G+R+ L+       M     
Sbjct: 494  CEMGKQSRRSFPKKSQSNTNKTLELIHSDVCGPMQTESINGSRYFLTFIDDFSRMTWVYF 553

Query: 666  *KKNQKLLEYLSRSRKKLNGK*EEKFRCLRPDNKREFISQEFSEFLQENRKRRQLTCSKT 487
             K   +++      +  +  + E + + LR D   EF+S+EF +  QE+    ++T   +
Sbjct: 554  LKNKSEVITKFKIFKPYVENQSESRIKRLRTDGGGEFLSREFIKLCQESGIHHEITTPYS 613

Query: 486  PKQ--VAKRTNRQLAETC*SMLHAKNALPEYWD*CIRTTAHVINRMPQAKFILKSTLEKL 313
            P+Q  VA+R NR L E   SM+  K    ++W   I T+ ++ NR+P        T  ++
Sbjct: 614  PQQNGVAERRNRTLVEMARSMIEEKKLSNKFWAEAIATSTYLQNRLPSKSLEKGVTPMEI 673

Query: 312  WN-IRPTVNHFRVFGSV*YVFVPDHLRMKFDKKAIRCIFVGYDSGRKGWRCSDPITGRCY 136
            W+  +P+V+H +VFG V Y+ +PD  R K D KA + IFVGY +  KG+R       +  
Sbjct: 674  WSGKKPSVDHLKVFGCVCYIHIPDEKRRKLDTKAKQGIFVGYSNESKGYRVFLLNEEKIE 733

Query: 135  VSRDVVFNEASSWWPLEK 82
            VS+DV F+E  +W   EK
Sbjct: 734  VSKDVTFDEKKTWSHDEK 751



 Score = 23.9 bits (50), Expect(2) = 3e-37
 Identities = 9/28 (32%), Positives = 20/28 (71%)
 Frame = -1

Query: 1181 QNVMHLERIKKNLLSVLQLTTSDIYVVF 1098
            ++V+++  + +NLLSV Q+ ++   V+F
Sbjct: 380  KDVLYVPELARNLLSVSQMISNGYRVIF 407


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  162 bits (410), Expect = 3e-37
 Identities = 105/341 (30%), Positives = 180/341 (52%), Gaps = 6/341 (1%)
 Frame = -3

Query: 1101 IRPDDIKIYRNVKIISTPILEGEKQEFVYVMSVETAYIDKTRKKEITDLWHARFGHFSYX 922
            ++ +++ I      + T +   + + FV  +  + A   K   KE + LWH RFGH ++ 
Sbjct: 419  LKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFG 478

Query: 921  XXXXXXXXXXXXXLPNLEVRDETICAGCQNGKAHQVPY-YESKFRARQPLELVHSDVFGP 745
                         LP +   ++ +C GC  GK  ++ +  ES  RA++PLEL+H+DV GP
Sbjct: 479  GLELLSRKEMVRGLPCINHPNQ-VCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGP 537

Query: 744  VRCLSVGGARW*LS--SKIIKGMCGHIL*KKNQKLLEYLSRSRKKLNGK*EEKFRCLRPD 571
            ++  S+G + + L       +    + L K+  ++ E   + +  +  +     + +R D
Sbjct: 538  IKPKSLGKSNYFLLFIDDFSRKTWVYFL-KEKSEVFEIFKKFKAHVEKESGLVIKTMRSD 596

Query: 570  NKREFISQEFSEFLQENRKRRQLTCSKTPKQ--VAKRTNRQLAETC*SMLHAKNALPEYW 397
               EF S+EF ++ ++N  RRQLT  ++P+Q  VA+R NR + E   SML +K    E W
Sbjct: 597  RGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELW 656

Query: 396  D*CIRTTAHVINRMPQAKFILKSTLEKLWNIR-PTVNHFRVFGSV*YVFVPDHLRMKFDK 220
               +    +++NR P  K +   T ++ W+ R P V+H RVFGS+ +  VPD  R K D 
Sbjct: 657  AEAVACAVYLLNRSP-TKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDD 715

Query: 219  KAIRCIFVGYDSGRKGWRCSDPITGRCYVSRDVVFNEASSW 97
            K+ + IF+GYD+  KG++  +P T +  +SR++VF+E   W
Sbjct: 716  KSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEW 756


>gb|ABA99612.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1198

 Score =  162 bits (410), Expect = 3e-37
 Identities = 98/296 (33%), Positives = 151/296 (51%), Gaps = 5/296 (1%)
 Frame = -3

Query: 969  EITDLWHARFGHFSYXXXXXXXXXXXXXXLPNLEVRDETICAGCQNGKAHQVPY-YESKF 793
            +I+DLWH R GH +Y              LP + ++ +  C GC  GK  +  + +   +
Sbjct: 404  DISDLWHKRMGHLNYRALKLLRTKGMVQGLPFITLKSDP-CEGCVFGKQIRASFPHSGAW 462

Query: 792  RARQPLELVHSDVFGPVRCLSVGGARW*LSSKI--IKGMCGHIL*KKNQKLLEYLSRSRK 619
            RA  PLELVH+D+ G V  +S GG  W   + I     M      K+    LE   + + 
Sbjct: 463  RASAPLELVHTDIVGKVPTISEGG-NWYFITFIDDYTRMIWVYFLKEKSAALEIFKKFKA 521

Query: 618  KLNGK*EEKFRCLRPDNKREFISQEFSEFLQENRKRRQLTCSKTPKQ--VAKRTNRQLAE 445
             +  +   K + LR D   E+IS+EF ++ +    RRQLT   + +Q  VA+R NR + +
Sbjct: 522  MVENQSNRKIKVLRSDQGGEYISKEFEKYCENAGIRRQLTAGYSAQQNGVAERKNRTIND 581

Query: 444  TC*SMLHAKNALPEYWD*CIRTTAHVINRMPQAKFILKSTLEKLWNIRPTVNHFRVFGSV 265
               SML  K     +W   + T  +++NR P      ++  E  +  +P + H RVFG +
Sbjct: 582  MANSMLQDKGMPKSFWAEAVNTAIYILNRSPTKAVPNRTPFEAWYGKKPVIGHMRVFGCI 641

Query: 264  *YVFVPDHLRMKFDKKAIRCIFVGYDSGRKGWRCSDPITGRCYVSRDVVFNEASSW 97
             Y  VP   R+KFD K+ RCIFVGY  G KG+R  +    +  +SRDV+F+E+++W
Sbjct: 642  CYAQVPAQKRVKFDNKSDRCIFVGYADGIKGYRLYNLEKKKIIISRDVIFDESATW 697


>emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]
          Length = 1183

 Score =  161 bits (407), Expect = 7e-37
 Identities = 99/327 (30%), Positives = 170/327 (51%), Gaps = 12/327 (3%)
 Frame = -3

Query: 963  TDLWHARFGHFSYXXXXXXXXXXXXXXLPNLEVRDETICAGCQNGKAHQVPYYESKFR-A 787
            ++LWH R+GH +               LP ++     +C GC  GK  + P+ + + R A
Sbjct: 371  SNLWHLRYGHLNVKGLKLLSKKEMVFGLPKID--SVNVCEGCIYGKQSKKPFPKGRSRRA 428

Query: 786  RQPLELVHSDVFGPVRCLSVGGARW*LS-SKIIKGMCGHIL*KKNQKLLEYLSRSRKKLN 610
               LE++H+D+ GP++  S GG+R+ L  +     M      +   +  E   + +  + 
Sbjct: 429  SSCLEIIHADLCGPMQTASFGGSRYFLLFTNDHSRMSWVYFLQSKAETFETFKKFKAFVE 488

Query: 609  GK*EEKFRCLRPDNKREFISQEFSEFLQENRKRRQLTCSKTPKQ--VAKRTNRQLAETC* 436
             +  +  + LR D   EF+S +F  F +E    R+LT   +P+Q  VA+R NR + E   
Sbjct: 489  KQSGKCIKVLRTDRGGEFLSNDFKVFCEEEGLHRELTTPYSPEQNGVAERKNRTVVEMAR 548

Query: 435  SMLHAKNALPEYWD*CIRTTAHVINRMPQAKFILKSTLEKLWNIRPTVNHFRVFGSV*YV 256
            SM+ AKN    +W   + T  +++N  P    + ++  E  +  +P V+H +VFGSV Y 
Sbjct: 549  SMMKAKNLSNHFWAEGVATAVYLLNISPTKAVLNRTPYEAWYGKKPWVSHLKVFGSVAYT 608

Query: 255  FVPDHLRMKFDKKAIRCIFVGYDSGRKGWRCSDPITGRCYVSRDVVFNEASSW-WP---- 91
             +  H R K D+K+++CIF+GY S  KG++  +P++G+  VSR+VVF+E +SW W     
Sbjct: 609  LIESHNRSKLDEKSVKCIFIGYCSQSKGYKLYNPVSGKIIVSRNVVFDEKASWTWRVSED 668

Query: 90   ---LEKMRTEDIEKIEEKVPLVQTIAT 19
               +E     ++ + E++ P VQ  A+
Sbjct: 669  GALVEISSESEVAQSEDQQPSVQIPAS 695


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  160 bits (406), Expect = 9e-37
 Identities = 104/341 (30%), Positives = 179/341 (52%), Gaps = 6/341 (1%)
 Frame = -3

Query: 1101 IRPDDIKIYRNVKIISTPILEGEKQEFVYVMSVETAYIDKTRKKEITDLWHARFGHFSYX 922
            ++ +++ I      + T +   + + FV  +  + A   K   KE + LWH RFGH ++ 
Sbjct: 419  LKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFG 478

Query: 921  XXXXXXXXXXXXXLPNLEVRDETICAGCQNGKAHQVPY-YESKFRARQPLELVHSDVFGP 745
                         LP +   ++ +C GC  GK  ++ +  ES  RA++PLEL+H+DV GP
Sbjct: 479  GLELLSRKEMVRGLPCINHPNQ-VCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGP 537

Query: 744  VRCLSVGGARW*LS--SKIIKGMCGHIL*KKNQKLLEYLSRSRKKLNGK*EEKFRCLRPD 571
            ++  S+G + + L       +    + L K+  ++ E   + +  +  +     + +R D
Sbjct: 538  IKPKSLGKSNYFLLFIDDFSRKTWVYFL-KEKSEVFEIFKKFKAHVEKESGLVIKTMRSD 596

Query: 570  NKREFISQEFSEFLQENRKRRQLTCSKTPKQ--VAKRTNRQLAETC*SMLHAKNALPEYW 397
               EF S+EF ++ ++N  RRQLT  ++P+Q  V +R NR + E   SML +K    E W
Sbjct: 597  RGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELW 656

Query: 396  D*CIRTTAHVINRMPQAKFILKSTLEKLWNIR-PTVNHFRVFGSV*YVFVPDHLRMKFDK 220
               +    +++NR P  K +   T ++ W+ R P V+H RVFGS+ +  VPD  R K D 
Sbjct: 657  AEAVACAVYLLNRSP-TKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDD 715

Query: 219  KAIRCIFVGYDSGRKGWRCSDPITGRCYVSRDVVFNEASSW 97
            K+ + IF+GYD+  KG++  +P T +  +SR++VF+E   W
Sbjct: 716  KSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEW 756


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  160 bits (406), Expect = 9e-37
 Identities = 104/341 (30%), Positives = 179/341 (52%), Gaps = 6/341 (1%)
 Frame = -3

Query: 1101 IRPDDIKIYRNVKIISTPILEGEKQEFVYVMSVETAYIDKTRKKEITDLWHARFGHFSYX 922
            ++ +++ I      + T +   + + FV  +  + A   K   KE + LWH RFGH ++ 
Sbjct: 419  LKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFG 478

Query: 921  XXXXXXXXXXXXXLPNLEVRDETICAGCQNGKAHQVPY-YESKFRARQPLELVHSDVFGP 745
                         LP +   ++ +C GC  GK  ++ +  ES  RA++PLEL+H+DV GP
Sbjct: 479  GLELLSRKEMVRGLPCINHPNQ-VCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGP 537

Query: 744  VRCLSVGGARW*LS--SKIIKGMCGHIL*KKNQKLLEYLSRSRKKLNGK*EEKFRCLRPD 571
            ++  S+G + + L       +    + L K+  ++ E   + +  +  +     + +R D
Sbjct: 538  IKPKSLGKSNYFLLFIDDFSRKTWVYFL-KEKSEVFEIFKKFKAHVEKESGLVIKTMRSD 596

Query: 570  NKREFISQEFSEFLQENRKRRQLTCSKTPKQ--VAKRTNRQLAETC*SMLHAKNALPEYW 397
               EF S+EF ++ ++N  RRQLT  ++P+Q  V +R NR + E   SML +K    E W
Sbjct: 597  RGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELW 656

Query: 396  D*CIRTTAHVINRMPQAKFILKSTLEKLWNIR-PTVNHFRVFGSV*YVFVPDHLRMKFDK 220
               +    +++NR P  K +   T ++ W+ R P V+H RVFGS+ +  VPD  R K D 
Sbjct: 657  AEAVACAVYLLNRSP-TKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDD 715

Query: 219  KAIRCIFVGYDSGRKGWRCSDPITGRCYVSRDVVFNEASSW 97
            K+ + IF+GYD+  KG++  +P T +  +SR++VF+E   W
Sbjct: 716  KSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEW 756


>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1272

 Score =  160 bits (405), Expect = 1e-36
 Identities = 104/341 (30%), Positives = 180/341 (52%), Gaps = 6/341 (1%)
 Frame = -3

Query: 1101 IRPDDIKIYRNVKIISTPILEGEKQEFVYVMSVETAYIDKTRKKEITDLWHARFGHFSYX 922
            ++ +++ I      + T +   + + FV  +  + A   K   KE + LWH RFGH ++ 
Sbjct: 419  LKDNNLSIRDKESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFG 478

Query: 921  XXXXXXXXXXXXXLPNLEVRDETICAGCQNGKAHQVPY-YESKFRARQPLELVHSDVFGP 745
                         LP +   ++ +C GC  G   ++ +  ES  RA++PLEL+H+DV GP
Sbjct: 479  GLELLSRKEMVRGLPCINHPNQ-VCEGCLLGNQFKMSFPKESSSRAQKPLELIHTDVCGP 537

Query: 744  VRCLSVGGARW*LS--SKIIKGMCGHIL*KKNQKLLEYLSRSRKKLNGK*EEKFRCLRPD 571
            ++  S+G + + L       +    + L K+  ++ E   + +  +  +     + +R D
Sbjct: 538  IKPKSLGKSNYFLLFIDDFSRKTWVYFL-KEKSEVFEIFKKFKAHVEKESGLVIKTMRSD 596

Query: 570  NKREFISQEFSEFLQENRKRRQLTCSKTPKQ--VAKRTNRQLAETC*SMLHAKNALPEYW 397
            +  EF S+EF ++ ++N  RRQLT  ++P+Q  VA+R NR + E   SML +K    E W
Sbjct: 597  SGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELW 656

Query: 396  D*CIRTTAHVINRMPQAKFILKSTLEKLWNIR-PTVNHFRVFGSV*YVFVPDHLRMKFDK 220
               +    +++NR P  K +   T ++ W+ R P V+H RVFGS+ +  VPD  R K D 
Sbjct: 657  AEAVACAVYLLNRSP-TKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRNKLDD 715

Query: 219  KAIRCIFVGYDSGRKGWRCSDPITGRCYVSRDVVFNEASSW 97
            K+ + IF+GYD+  KG++  +P T +  +SR++VF+E   W
Sbjct: 716  KSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEW 756


>emb|CBI37296.3| unnamed protein product [Vitis vinifera]
          Length = 3048

 Score =  159 bits (403), Expect = 2e-36
 Identities = 105/302 (34%), Positives = 156/302 (51%), Gaps = 7/302 (2%)
 Frame = -3

Query: 981  TRKKEITDLWHARFGHFSYXXXXXXXXXXXXXXLPNLEVRDETICAGCQNGKAHQ--VPY 808
            T  ++I  LWH R+GH S+              LP  +   + +C  C  GK H+  +P 
Sbjct: 445  TVTEDILQLWHCRYGHLSFQGLKTLQQRKMVNGLPQFQPPSK-LCKDCLVGKQHRSSIPK 503

Query: 807  YESKFRARQPLELVHSDVFGPVRCLSVGGARW*LS--SKIIKGMCGHIL*KKNQKLLEYL 634
             +S +RA + L+LVH+D+ GP+  +S    R+ L+      +    + L +K++    + 
Sbjct: 504  -KSNWRAAEILQLVHADICGPINPISNSKKRYLLTFTDDFSRKTWVYFLVEKSEAFAVF- 561

Query: 633  SRSRKKLNGK*EEKF-RCLRPDNKREFISQEFSEFLQENRKRRQLTCSKTPKQ--VAKRT 463
             +S K    K    F RCLR D   EF SQEF+ F   +  RRQLT + TP+Q  VA+R 
Sbjct: 562  -KSFKTYVEKETSSFLRCLRTDRGGEFTSQEFAIFCDVHGIRRQLTAAYTPQQNGVAERK 620

Query: 462  NRQLAETC*SMLHAKNALPEYWD*CIRTTAHVINRMPQAKFILKSTLEKLWNIRPTVNHF 283
            NR +     SML AK     +W   +  T HV+NR P      K+  E    ++P+V++F
Sbjct: 621  NRTIMNMVRSMLSAKKLPKTFWPEAVNWTVHVLNRSPTFAVQNKTPEEAWGKLKPSVDYF 680

Query: 282  RVFGSV*YVFVPDHLRMKFDKKAIRCIFVGYDSGRKGWRCSDPITGRCYVSRDVVFNEAS 103
            RVFG + +V VPD  R K D K+  C+ +G     K +R  DPI+ +  +SRDVVF E  
Sbjct: 681  RVFGCLSHVHVPDSKRTKLDDKSFSCVLLGVSEESKAYRLYDPISQKIIISRDVVFEEDK 740

Query: 102  SW 97
            +W
Sbjct: 741  NW 742


>gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza sativa Japonica Group]
            gi|31429795|gb|AAP51797.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1350

 Score =  159 bits (402), Expect = 2e-36
 Identities = 97/296 (32%), Positives = 150/296 (50%), Gaps = 5/296 (1%)
 Frame = -3

Query: 969  EITDLWHARFGHFSYXXXXXXXXXXXXXXLPNLEVRDETICAGCQNGKAHQVPY-YESKF 793
            +I+DLWH R GH +Y              LP + ++ +  C GC  GK  +  + +   +
Sbjct: 376  DISDLWHKRMGHLNYRALKLLRTKGMVQGLPFITLKSDP-CEGCVFGKQIRASFPHSGAW 434

Query: 792  RARQPLELVHSDVFGPVRCLSVGGARW*LSSKI--IKGMCGHIL*KKNQKLLEYLSRSRK 619
            RA  PLELVH+D+ G V  +S GG  W   + I     M      K+    LE   + + 
Sbjct: 435  RASAPLELVHTDIVGKVPTISEGG-NWYFITFIDDYTRMIWVYFLKEKSAALEIFKKFKA 493

Query: 618  KLNGK*EEKFRCLRPDNKREFISQEFSEFLQENRKRRQLTCSKTPKQ--VAKRTNRQLAE 445
             +  +   K + LR D   E+IS+EF ++ +    RRQLT   + +Q  VA+R NR + +
Sbjct: 494  MVENQSNRKIKVLRSDQGGEYISKEFEKYCENAGIRRQLTAGYSAQQNGVAERKNRTIND 553

Query: 444  TC*SMLHAKNALPEYWD*CIRTTAHVINRMPQAKFILKSTLEKLWNIRPTVNHFRVFGSV 265
               SML  K     +W   + T  +++NR P      ++  E  +  +P + H RVFG +
Sbjct: 554  MANSMLQDKGMPKSFWAEAVNTAIYILNRSPTKAVPNRTPFEAWYGKKPVIGHMRVFGCI 613

Query: 264  *YVFVPDHLRMKFDKKAIRCIFVGYDSGRKGWRCSDPITGRCYVSRDVVFNEASSW 97
             Y  VP   R+KFD K+  CIFVGY  G KG+R  +    +  +SRDV+F+E+++W
Sbjct: 614  CYAQVPAQKRVKFDNKSDWCIFVGYADGIKGYRLYNLEKKKIIISRDVIFDESATW 669


>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
          Length = 1291

 Score =  158 bits (399), Expect = 6e-36
 Identities = 106/339 (31%), Positives = 174/339 (51%), Gaps = 4/339 (1%)
 Frame = -3

Query: 1101 IRPDDIKIYRNVKIISTPILEGEKQEFVYVMSVETAYIDKTRKKEITDLWHARFGHFSYX 922
            ++ +++ I      + T +   + + FV  +  + A   K   KE + LWH RFGH ++ 
Sbjct: 381  LKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFG 440

Query: 921  XXXXXXXXXXXXXLPNLEVRDETICAGCQNGKAHQVPY-YESKFRARQPLELVHSDVFGP 745
                         LP +   ++ +C GC  GK  ++ +  ES  RA++PLEL+H+DV GP
Sbjct: 441  GLELLSRKEMVRGLPCINHPNQ-VCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGP 499

Query: 744  VRCLSVGGARW*LSSKIIKGMCGHIL*KKNQKLLEYLSRSRKKLNGK*EEKFRCLRPDNK 565
            ++  S+  +      KI K    H+  +K   L+                  + +R D  
Sbjct: 500  IKPKSLEKSE---VFKIFKKFKAHV--EKESGLV-----------------IKTMRSDRG 537

Query: 564  REFISQEFSEFLQENRKRRQLTCSKTPKQ--VAKRTNRQLAETC*SMLHAKNALPEYWD* 391
             EF S+EF ++ ++N  RRQLT  ++P+Q  VA+R NR + E   SML +K    E W  
Sbjct: 538  GEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAE 597

Query: 390  CIRTTAHVINRMPQAKFILKSTLEKLWNIR-PTVNHFRVFGSV*YVFVPDHLRMKFDKKA 214
             +    +++NR P  K +   T ++ W+ R P V+H RVFGS+ +  VPD  R K D K+
Sbjct: 598  AVACAVYLLNRSP-TKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKS 656

Query: 213  IRCIFVGYDSGRKGWRCSDPITGRCYVSRDVVFNEASSW 97
             + IF+GYD+  KG++  +P T +  +SR++VF+E   W
Sbjct: 657  EKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEW 695


>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score =  158 bits (399), Expect = 6e-36
 Identities = 104/300 (34%), Positives = 159/300 (53%), Gaps = 6/300 (2%)
 Frame = -3

Query: 978  RKKEITDLWHARFGHFSYXXXXXXXXXXXXXXLPNLEVRDETICAGCQNGKAHQVPYYES 799
            ++K  T+LWH R+GH +               LPN++  D  +C GC  GK  +  +   
Sbjct: 437  KEKNETNLWHLRYGHLNVNWLKLLVQKDMVIGLPNIKELD--LCEGCIYGKQTRKSFPVG 494

Query: 798  K-FRARQPLELVHSDVFGPVRCLSVGGARW*L--SSKIIKGMCGHIL*KKNQKLLEYLSR 628
            K +RA   LELVH+D+ GP++  S+GG+R+ L  +    +    + L K   +  E   +
Sbjct: 495  KSWRATTCLELVHADLCGPMKMESLGGSRYFLMFTDDYSRFSWVYFL-KFKSETFETFKK 553

Query: 627  SRKKLNGK*EEKFRCLRPDNKREFISQEFSEFLQENRKRRQLTCSKTPKQ--VAKRTNRQ 454
             +  +  +   K + LR D   EF+S +F+ F +EN  RR+LT   TP+Q  VA+R NR 
Sbjct: 554  FKAFVENQSGNKIKSLRTDRGGEFLSNDFNLFCEENGIRRELTAPYTPEQNGVAERKNRT 613

Query: 453  LAETC*SMLHAKNALPEYWD*CIRTTAHVINRMPQAKFILKSTLEKLWN-IRPTVNHFRV 277
            + E   S L AK     +W   + T  + +N  P  K +  +T  + WN  +P V+H R+
Sbjct: 614  VVEMARSSLKAKGLPDYFWGEAVATVVYFLNISP-TKDVWNTTPLEAWNGKKPRVSHLRI 672

Query: 276  FGSV*YVFVPDHLRMKFDKKAIRCIFVGYDSGRKGWRCSDPITGRCYVSRDVVFNEASSW 97
            FG + Y  V  H   K D+K+ +CIFVGY    K +R  +PI+G+  +SR+VVFNE  SW
Sbjct: 673  FGCIAYALVNFH--SKLDEKSTKCIFVGYSLQSKAYRLYNPISGKVIISRNVVFNEDVSW 730


>emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group]
          Length = 1314

 Score =  157 bits (398), Expect = 7e-36
 Identities = 97/296 (32%), Positives = 148/296 (50%), Gaps = 5/296 (1%)
 Frame = -3

Query: 969  EITDLWHARFGHFSYXXXXXXXXXXXXXXLPNLEVRDETICAGCQNGKAHQVPY-YESKF 793
            +I+DLWH R GH +Y              LP + ++ +  C GC  GK  Q  + +   +
Sbjct: 460  DISDLWHKRMGHLNYRALKLLRTKGMVQGLPFITLKSDP-CEGCVFGKQIQASFPHSGAW 518

Query: 792  RARQPLELVHSDVFGPVRCLSVGGARW*LSSKI--IKGMCGHIL*KKNQKLLEYLSRSRK 619
            RA  P ELVH+D+ G V  +S GG  W   + I     M      K+    LE   + + 
Sbjct: 519  RASAPFELVHTDIVGKVPTMSEGG-NWYFITFIDDYTRMIWVYFLKEKSAALETFKKFKV 577

Query: 618  KLNGK*EEKFRCLRPDNKREFISQEFSEFLQENRKRRQLTCSKTPKQ--VAKRTNRQLAE 445
             +  +   K + LR D   E+IS+EF ++ +    RRQLT   + +Q  VA+R NR + +
Sbjct: 578  MVENQSNRKIKVLRSDQGGEYISKEFEKYCENAGIRRQLTTGYSAQQNGVAERKNRTIND 637

Query: 444  TC*SMLHAKNALPEYWD*CIRTTAHVINRMPQAKFILKSTLEKLWNIRPTVNHFRVFGSV 265
               SML  K     +W   + T  +++NR P      ++  E  +  +P + H RVF  +
Sbjct: 638  MANSMLQDKGMPKSFWAEAVNTAVYILNRSPTKAVPNRTPFEAWYGKKPVIGHMRVFACI 697

Query: 264  *YVFVPDHLRMKFDKKAIRCIFVGYDSGRKGWRCSDPITGRCYVSRDVVFNEASSW 97
             Y  VP   R+KFD K+ RCIFVGY  G KG+R  +    +  +SRDV F+E+++W
Sbjct: 698  CYAQVPAQKRVKFDNKSNRCIFVGYADGIKGYRLYNLEKKKIIISRDVFFDESATW 753