BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00022787
         (593 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]              179   1e-64
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]                  180   2e-58
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja...   177   4e-58
emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]        177   4e-58
dbj|BAH80072.1| putative unclassified retrotransposon protein [O...   177   4e-58
gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]                  178   9e-58
gb|ABA98082.1| retrotransposon protein, putative, Ty3-gypsy subc...   174   4e-57
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni...   171   2e-56
emb|CAN83237.1| hypothetical protein VITISV_029623 [Vitis vinifera]   138   2e-49
gb|AAD51320.1| polymerase [Triticum aestivum]                         146   4e-44
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum...   181   1e-43
gb|AAM94350.1| gag-pol polyprotein [Zea mays]                         178   1e-42
emb|CAE02303.2| OSJNBa0042F21.10 [Oryza sativa Japonica Group]        178   1e-42
gb|ADB27475.1| gag-pol polyprotein [Cenchrus setaceus]                177   2e-42
gb|AAQ56339.1| putative gag-pol polyprotein [Oryza sativa Japoni...   177   2e-42
emb|CAN71870.1| hypothetical protein VITISV_044169 [Vitis vinifera]   177   2e-42
emb|CAE02877.1| OSJNBb0022F23.14 [Oryza sativa Japonica Group]        177   2e-42
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]     176   3e-42
gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|...   176   3e-42
emb|CAH66606.1| H0211A12.9 [Oryza sativa Indica Group]                176   4e-42

>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
          Length = 1887

 Score =  179 bits (455), Expect(2) = 1e-64
 Identities = 83/106 (78%), Positives = 93/106 (87%)
 Frame = -3

Query: 555  KPLAYFSEKLNGAAVRYSTYDKELYALIRTLKHCQHYLWPKEFVVHTDHEALKFLKGQHK 376
            KP+AYFSEKL GA + Y TYDKELYAL+R L+  QHYLWPKEFV+HTDHE+LK LKGQ K
Sbjct: 1226 KPIAYFSEKLGGATLNYPTYDKELYALVRALQTGQHYLWPKEFVIHTDHESLKHLKGQQK 1285

Query: 375  LNRRHARWMEFIETFPYVIHYKKGKENVVADALSRRYTLLSTLQTK 238
            LN+RHARW+EFIETFPYVI YKKGK+NVVADALSRRY LLS+L  K
Sbjct: 1286 LNKRHARWVEFIETFPYVIKYKKGKDNVVADALSRRYVLLSSLDAK 1331



 Score = 93.2 bits (230), Expect(2) = 1e-64
 Identities = 40/79 (50%), Positives = 60/79 (75%)
 Frame = -2

Query: 241  KILGFEMLKEMYSSDHDFKEIF*KCLLAPFGKYFLHEGFLYCEGRLCIPSCSTRILLVKE 62
            K+LGFE +K +Y++D DF++I+  C    FGKY+ H+GFL+ + RLCIP+ S R L ++E
Sbjct: 1331 KLLGFEHIKSLYANDSDFEKIYSSCEKFAFGKYYRHDGFLFYDNRLCIPNSSLRELFIRE 1390

Query: 61   AYCGGLMVHFGVTKTYEIL 5
            A+ GGLM HFGV+KT +++
Sbjct: 1391 AHGGGLMGHFGVSKTIKVM 1409


>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1720

 Score =  180 bits (456), Expect(2) = 2e-58
 Identities = 82/115 (71%), Positives = 101/115 (87%)
 Frame = -3

Query: 558  GKPLAYFSEKLNGAAVRYSTYDKELYALIRTLKHCQHYLWPKEFVVHTDHEALKFLKGQH 379
            GKP+AYFSEKL+G ++ YSTYDKELYAL+RTL+  QHYLWPKEFV+H+DHE+LK +K Q 
Sbjct: 1092 GKPVAYFSEKLSGPSLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIKSQA 1151

Query: 378  KLNRRHARWMEFIETFPYVIHYKKGKENVVADALSRRYTLLSTLQTKFWVLKCLK 214
            KLNRRHA+W+EFIETFPYVI +KKGK+NV+ADALSRRYT+LS L  K + L+ +K
Sbjct: 1152 KLNRRHAKWVEFIETFPYVIKHKKGKDNVIADALSRRYTMLSQLDFKIFGLETIK 1206



 Score = 72.0 bits (175), Expect(2) = 2e-58
 Identities = 34/80 (42%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
 Frame = -2

Query: 241  KILGFEMLKEMYSSDHDFKEIF*KCLLA-PFGKYFLHEGFLYCEGRLCIPSCSTRILLVK 65
            KI G E +K+ Y  D DFK++   C     + K+ ++ GF++   +LCIP+ S R+LL++
Sbjct: 1198 KIFGLETIKDQYVHDADFKDVLENCREGRTWNKFIINNGFVFRANKLCIPASSIRLLLLQ 1257

Query: 64   EAYCGGLMVHFGVTKTYEIL 5
            EA+ GGLM HFGV K  ++L
Sbjct: 1258 EAHGGGLMGHFGVKKMEDVL 1277


>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
            gi|31431012|gb|AAP52850.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 2447

 Score =  177 bits (449), Expect(2) = 4e-58
 Identities = 80/115 (69%), Positives = 100/115 (86%)
 Frame = -3

Query: 558  GKPLAYFSEKLNGAAVRYSTYDKELYALIRTLKHCQHYLWPKEFVVHTDHEALKFLKGQH 379
            GKP+AYFSEKL+G  + YSTYDKELYAL+RTL+  QHYLWPKEFV+H+DHE+LK ++ Q 
Sbjct: 1033 GKPVAYFSEKLSGPVLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQG 1092

Query: 378  KLNRRHARWMEFIETFPYVIHYKKGKENVVADALSRRYTLLSTLQTKFWVLKCLK 214
            KLNRRHA+W+EFIE+FPYVI +KKGKEN++ADALSRRYTLL+ L  K + L+ +K
Sbjct: 1093 KLNRRHAKWVEFIESFPYVIKHKKGKENIIADALSRRYTLLTQLDYKIFGLETIK 1147



 Score = 73.9 bits (180), Expect(2) = 4e-58
 Identities = 34/80 (42%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
 Frame = -2

Query: 241  KILGFEMLKEMYSSDHDFKEIF*KCLLA-PFGKYFLHEGFLYCEGRLCIPSCSTRILLVK 65
            KI G E +K+ Y+ D DF ++   C     + K+ +++GF++   +LCIP+ S R+LL++
Sbjct: 1139 KIFGLETIKDQYAHDADFNDVLLHCKDGRTWNKFVINDGFVFRANKLCIPASSVRLLLLQ 1198

Query: 64   EAYCGGLMVHFGVTKTYEIL 5
            EA+ GGLM HFG  KT++IL
Sbjct: 1199 EAHGGGLMGHFGAKKTHDIL 1218



 Score = 82.4 bits (202), Expect = 8e-14
 Identities = 43/97 (44%), Positives = 59/97 (60%)
 Frame = -3

Query: 558  GKPLAYFSEKLNGAAVRYSTYDKELYALIRTLKHCQHYLWPKEFVVHTDHEALKFLKGQH 379
            G  +AY S +L      Y T+D EL A++  LK  +HYL      ++TDH++LK++  Q 
Sbjct: 1825 GHVVAYASRQLWPHEGNYPTHDLELAAVVHALKIWRHYLIGNRCEIYTDHKSLKYIFTQS 1884

Query: 378  KLNRRHARWMEFIETFPYVIHYKKGKENVVADALSRR 268
             LN R  RW+E I+ +   IHY  GK NVVADALSR+
Sbjct: 1885 DLNLRQRRWLELIKDYDVGIHYHPGKANVVADALSRK 1921


>emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]
          Length = 2241

 Score =  177 bits (449), Expect(2) = 4e-58
 Identities = 80/115 (69%), Positives = 100/115 (86%)
 Frame = -3

Query: 558  GKPLAYFSEKLNGAAVRYSTYDKELYALIRTLKHCQHYLWPKEFVVHTDHEALKFLKGQH 379
            GKP+AYFSEKL+G  + YSTYDKELYAL+RTL+  QHYLWPKEFV+H+DHE+LK ++ Q 
Sbjct: 1127 GKPVAYFSEKLSGPVLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQG 1186

Query: 378  KLNRRHARWMEFIETFPYVIHYKKGKENVVADALSRRYTLLSTLQTKFWVLKCLK 214
            KLNRRHA+W+EFIE+FPYVI +KKGKEN++ADALSRRYTLL+ L  K + L+ +K
Sbjct: 1187 KLNRRHAKWVEFIESFPYVIKHKKGKENIIADALSRRYTLLTQLDYKIFGLETIK 1241



 Score = 73.9 bits (180), Expect(2) = 4e-58
 Identities = 34/80 (42%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
 Frame = -2

Query: 241  KILGFEMLKEMYSSDHDFKEIF*KCLLA-PFGKYFLHEGFLYCEGRLCIPSCSTRILLVK 65
            KI G E +K+ Y+ D DF ++   C     + K+ +++GF++   +LCIP+ S R+LL++
Sbjct: 1233 KIFGLETIKDQYAHDADFNDVLLHCKDGRTWNKFVINDGFVFRANKLCIPASSVRLLLLQ 1292

Query: 64   EAYCGGLMVHFGVTKTYEIL 5
            EA+ GGLM HFG  KT++IL
Sbjct: 1293 EAHGGGLMGHFGAKKTHDIL 1312


>dbj|BAH80072.1| putative unclassified retrotransposon protein [Oryza sativa Indica
           Group]
          Length = 848

 Score =  177 bits (449), Expect(2) = 4e-58
 Identities = 80/115 (69%), Positives = 100/115 (86%)
 Frame = -3

Query: 558 GKPLAYFSEKLNGAAVRYSTYDKELYALIRTLKHCQHYLWPKEFVVHTDHEALKFLKGQH 379
           GKP+AYFSEKL+G  + YSTYDKELYAL+RTL+  QHYLWPKEFV+H+DHE+LK ++ Q 
Sbjct: 397 GKPVAYFSEKLSGPVLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQG 456

Query: 378 KLNRRHARWMEFIETFPYVIHYKKGKENVVADALSRRYTLLSTLQTKFWVLKCLK 214
           KLNRRHA+W+EFIE+FPYVI +KKGKEN++ADALSRRYTLL+ L  K + L+ +K
Sbjct: 457 KLNRRHAKWVEFIESFPYVIKHKKGKENIIADALSRRYTLLTQLDYKIFGLETIK 511



 Score = 73.9 bits (180), Expect(2) = 4e-58
 Identities = 34/80 (42%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
 Frame = -2

Query: 241 KILGFEMLKEMYSSDHDFKEIF*KCLLA-PFGKYFLHEGFLYCEGRLCIPSCSTRILLVK 65
           KI G E +K+ Y+ D DF ++   C     + K+ +++GF++   +LCIP+ S R+LL++
Sbjct: 503 KIFGLETIKDQYAHDADFNDVLLHCKDGRTWNKFVINDGFVFRANKLCIPASSVRLLLLQ 562

Query: 64  EAYCGGLMVHFGVTKTYEIL 5
           EA+ GGLM HFG  KT++IL
Sbjct: 563 EAHGGGLMGHFGAKKTHDIL 582


>gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1717

 Score =  178 bits (451), Expect(2) = 9e-58
 Identities = 82/115 (71%), Positives = 100/115 (86%)
 Frame = -3

Query: 558  GKPLAYFSEKLNGAAVRYSTYDKELYALIRTLKHCQHYLWPKEFVVHTDHEALKFLKGQH 379
            GKP+AYFSEKL+G ++ YSTYDKELYAL+RTL+  QHYLWPKEFV+H+DHE+LK +K Q 
Sbjct: 1089 GKPVAYFSEKLSGPSLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIKSQA 1148

Query: 378  KLNRRHARWMEFIETFPYVIHYKKGKENVVADALSRRYTLLSTLQTKFWVLKCLK 214
            KLNRRHA+W+EFIETFPYVI  KKGK+NV+ADALSRRYT+LS L  K + L+ +K
Sbjct: 1149 KLNRRHAKWVEFIETFPYVIKDKKGKDNVIADALSRRYTMLSQLDFKIFGLETIK 1203



 Score = 72.0 bits (175), Expect(2) = 9e-58
 Identities = 34/80 (42%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
 Frame = -2

Query: 241  KILGFEMLKEMYSSDHDFKEIF*KCLLA-PFGKYFLHEGFLYCEGRLCIPSCSTRILLVK 65
            KI G E +K+ Y  D DFK++   C     + K+ ++ GF++   +LCIP+ S R+LL++
Sbjct: 1195 KIFGLETIKDQYVHDADFKDVLENCREGRTWNKFIINNGFVFRANKLCIPASSIRLLLLQ 1254

Query: 64   EAYCGGLMVHFGVTKTYEIL 5
            EA+ GGLM HFGV K  ++L
Sbjct: 1255 EAHGGGLMGHFGVKKMEDVL 1274


>gb|ABA98082.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 817

 Score =  174 bits (440), Expect(2) = 4e-57
 Identities = 78/115 (67%), Positives = 100/115 (86%)
 Frame = -3

Query: 558 GKPLAYFSEKLNGAAVRYSTYDKELYALIRTLKHCQHYLWPKEFVVHTDHEALKFLKGQH 379
           GKP+AYFSEKL+G  + YSTYDKELYAL+RTL+  QHYLWPK+FV+H+DHE+LK ++ Q 
Sbjct: 366 GKPVAYFSEKLSGPVLNYSTYDKELYALVRTLETWQHYLWPKKFVIHSDHESLKHIRSQG 425

Query: 378 KLNRRHARWMEFIETFPYVIHYKKGKENVVADALSRRYTLLSTLQTKFWVLKCLK 214
           KLNRRHA+W+EFIE+FPYVI +KKGKEN++A+ALSRRYTLL+ L  K + L+ +K
Sbjct: 426 KLNRRHAKWVEFIESFPYVIKHKKGKENIIANALSRRYTLLTQLDYKIFGLETIK 480



 Score = 73.9 bits (180), Expect(2) = 4e-57
 Identities = 34/80 (42%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
 Frame = -2

Query: 241 KILGFEMLKEMYSSDHDFKEIF*KCLLA-PFGKYFLHEGFLYCEGRLCIPSCSTRILLVK 65
           KI G E +K+ Y+ D DF ++   C     + K+ +++GF++   +LCIP+ S R+LL++
Sbjct: 472 KIFGLETIKDQYAHDADFNDVLLHCKDGRTWNKFVINDGFVFRANKLCIPASSVRLLLLQ 531

Query: 64  EAYCGGLMVHFGVTKTYEIL 5
           EA+ GGLM HFG  KT++IL
Sbjct: 532 EAHGGGLMGHFGAKKTHDIL 551


>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1619

 Score =  171 bits (434), Expect(2) = 2e-56
 Identities = 78/115 (67%), Positives = 99/115 (86%)
 Frame = -3

Query: 558  GKPLAYFSEKLNGAAVRYSTYDKELYALIRTLKHCQHYLWPKEFVVHTDHEALKFLKGQH 379
            GK +AYFSEKL+G  + YSTYDKELYAL+RTL+  QHYLWPKEFV+H+DHE+LK ++ Q 
Sbjct: 1012 GKLVAYFSEKLSGPVLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQG 1071

Query: 378  KLNRRHARWMEFIETFPYVIHYKKGKENVVADALSRRYTLLSTLQTKFWVLKCLK 214
            KLNRRHA+W+EFIE+FPYVI +KKGKEN++A+ALSRRYTLL+ L  K + L+ +K
Sbjct: 1072 KLNRRHAKWVEFIESFPYVIKHKKGKENIIANALSRRYTLLTQLDYKIFGLETIK 1126



 Score = 73.9 bits (180), Expect(2) = 2e-56
 Identities = 34/80 (42%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
 Frame = -2

Query: 241  KILGFEMLKEMYSSDHDFKEIF*KCLLA-PFGKYFLHEGFLYCEGRLCIPSCSTRILLVK 65
            KI G E +K+ Y+ D DF ++   C     + K+ +++GF++   +LCIP+ S R+LL++
Sbjct: 1118 KIFGLETIKDQYAHDADFNDVLLHCKDGRTWNKFVINDGFVFRANKLCIPASSVRLLLLQ 1177

Query: 64   EAYCGGLMVHFGVTKTYEIL 5
            EA+ GGLM HFG  KT++IL
Sbjct: 1178 EAHGGGLMGHFGAKKTHDIL 1197


>emb|CAN83237.1| hypothetical protein VITISV_029623 [Vitis vinifera]
          Length = 1124

 Score =  138 bits (348), Expect(2) = 2e-49
 Identities = 63/82 (76%), Positives = 71/82 (86%)
 Frame = -3

Query: 555 KPLAYFSEKLNGAAVRYSTYDKELYALIRTLKHCQHYLWPKEFVVHTDHEALKFLKGQHK 376
           +P+AYFSEKLNGA + Y TYDKELYAL+R L+  QHYLWPKEFV+HTDHE LK LKGQ K
Sbjct: 640 RPIAYFSEKLNGATLNYPTYDKELYALVRALETWQHYLWPKEFVIHTDHEFLKHLKGQDK 699

Query: 375 LNRRHARWMEFIETFPYVIHYK 310
           LNRRHA+ +EFIETFPYVI YK
Sbjct: 700 LNRRHAKRVEFIETFPYVIKYK 721



 Score = 83.6 bits (205), Expect(2) = 2e-49
 Identities = 37/76 (48%), Positives = 54/76 (71%)
 Frame = -2

Query: 229 FEMLKEMYSSDHDFKEIF*KCLLAPFGKYFLHEGFLYCEGRLCIPSCSTRILLVKEAYCG 50
           FE +KE+Y++D DF  ++  C  A FGK++  +G+L+ E RLC+P+ S R  LV+EA+  
Sbjct: 731 FEYVKELYANDDDFASVYGACEKAAFGKFYRLDGYLFRENRLCVPNSSMREFLVREAHGD 790

Query: 49  GLMVHFGVTKTYEILH 2
           GLM HFGV KT ++LH
Sbjct: 791 GLMGHFGVRKTLDVLH 806


>gb|AAD51320.1| polymerase [Triticum aestivum]
          Length = 235

 Score =  146 bits (369), Expect(2) = 4e-44
 Identities = 66/104 (63%), Positives = 83/104 (79%)
 Frame = -3

Query: 555 KPLAYFSEKLNGAAVRYSTYDKELYALIRTLKHCQHYLWPKEFVVHTDHEALKFLKGQHK 376
           +P+AYF EKL+GA + Y  YDKELYAL+R L   +HYL P EF++HTDHE LK+LKGQ K
Sbjct: 17  RPIAYFREKLSGAQLNYPIYDKELYALVRVLHEWEHYLRPHEFIIHTDHETLKYLKGQTK 76

Query: 375 LNRRHARWMEFIETFPYVIHYKKGKENVVADALSRRYTLLSTLQ 244
           LN+RHA+W EFIE+FPYVI Y KGKEN++ADALS    L++ L+
Sbjct: 77  LNKRHAKWSEFIESFPYVIKYIKGKENIIADALSHICMLVTQLE 120



 Score = 57.8 bits (138), Expect(2) = 4e-44
 Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
 Frame = -2

Query: 238 ILGFEMLKEMYSSDHDFKEIF*KCLL-APFGKYFLHEGFLYCEGRLCIPSCSTRILLVKE 62
           ++GFE +KE+Y  D  F   + KCL    + +Y++ +G+L    +L IP  S  +LL++E
Sbjct: 123 VIGFEHIKELYEHDETFATPYAKCLSNTSWERYYIKDGYLMRANKLYIPKSSLSLLLLQE 182

Query: 61  AYCGGLMVHFGVTKTYEIL 5
           ++ GGLM H    KT+  L
Sbjct: 183 SHGGGLMGHLRRDKTFATL 201


>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
            aegilopoides]
          Length = 1704

 Score =  181 bits (460), Expect = 1e-43
 Identities = 87/151 (57%), Positives = 112/151 (74%)
 Frame = -3

Query: 558  GKPLAYFSEKLNGAAVRYSTYDKELYALIRTLKHCQHYLWPKEFVVHTDHEALKFLKGQH 379
            GKP+AYFSEK +G ++ YSTYDKELYAL+RTL+  QHYLWPKEFV+H+DHE+LK +K Q 
Sbjct: 1077 GKPVAYFSEKFSGPSLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIKSQA 1136

Query: 378  KLNRRHARWMEFIETFPYVIHYKKGKENVVADALSRRYTLLSTLQTKFWVLKCLKKCILV 199
            KLNRRHA+W+EFIETFPYVI +KKGKENV+ADALSRRYT+LS L  K + L+ +K   + 
Sbjct: 1137 KLNRRHAKWVEFIETFPYVIKHKKGKENVIADALSRRYTMLSQLDFKIFGLETIKDQYVH 1196

Query: 198  IMTLRKFFRNAY*HLLENIFCMKDFFIVKVD 106
                +   +N       N F + D F+ + +
Sbjct: 1197 DAEFKDVLQNCKEGRTWNKFVLNDGFVFRAN 1227



 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 36/80 (45%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
 Frame = -2

Query: 241  KILGFEMLKEMYSSDHDFKEIF*KCLLA-PFGKYFLHEGFLYCEGRLCIPSCSTRILLVK 65
            KI G E +K+ Y  D +FK++   C     + K+ L++GF++   +LCIP+ S R+LL++
Sbjct: 1183 KIFGLETIKDQYVHDAEFKDVLQNCKEGRTWNKFVLNDGFVFRANKLCIPASSVRLLLLQ 1242

Query: 64   EAYCGGLMVHFGVTKTYEIL 5
            EA+ GGLM HFGV KT +IL
Sbjct: 1243 EAHGGGLMGHFGVKKTEDIL 1262


>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
          Length = 1618

 Score =  178 bits (451), Expect = 1e-42
 Identities = 80/115 (69%), Positives = 101/115 (87%)
 Frame = -3

Query: 558  GKPLAYFSEKLNGAAVRYSTYDKELYALIRTLKHCQHYLWPKEFVVHTDHEALKFLKGQH 379
            GKP+AYFSEKL+G+ + YSTYDKELYAL+RTL+  QHYLWPKEFV+H+DHE+LK ++ Q 
Sbjct: 1036 GKPVAYFSEKLSGSVLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQG 1095

Query: 378  KLNRRHARWMEFIETFPYVIHYKKGKENVVADALSRRYTLLSTLQTKFWVLKCLK 214
            KLNRRHA+W+EFIE+FPYVI +KKGKEN++ADALSRRYTLL+ L  K + L+ +K
Sbjct: 1096 KLNRRHAKWVEFIESFPYVIKHKKGKENIIADALSRRYTLLNQLDYKIFGLETIK 1150



 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 38/94 (40%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
 Frame = -2

Query: 280  SIKKVYSLIHPSN-KILGFEMLKEMYSSDHDFKEIF*KCLLAP-FGKYFLHEGFLYCEGR 107
            ++ + Y+L++  + KI G E +K+ Y  D DFK++   C     + KY + +GF++   +
Sbjct: 1128 ALSRRYTLLNQLDYKIFGLETIKDQYVHDADFKDVLLHCKDGKGWNKYIVSDGFVFRANK 1187

Query: 106  LCIPSCSTRILLVKEAYCGGLMVHFGVTKTYEIL 5
            LCIP+ S R+LL++EA+ GGLM HFG  KT +IL
Sbjct: 1188 LCIPASSVRLLLLQEAHGGGLMGHFGAKKTEDIL 1221


>emb|CAE02303.2| OSJNBa0042F21.10 [Oryza sativa Japonica Group]
          Length = 2388

 Score =  178 bits (451), Expect = 1e-42
 Identities = 82/125 (65%), Positives = 106/125 (84%), Gaps = 3/125 (2%)
 Frame = -3

Query: 558  GKPLAYFSEKLNGAAVRYSTYDKELYALIRTLKHCQHYLWPKEFVVHTDHEALKFLKGQH 379
            GKP+AYFSEKL+G  + YSTYDKELYAL+RTL+  QHYLWPKEFV+H+DHE+LK ++ Q 
Sbjct: 869  GKPVAYFSEKLSGLVLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQG 928

Query: 378  KLNRRHARWMEFIETFPYVIHYKKGKENVVADALSRRYTLLSTLQTKFWVLKCLK---KC 208
            KLNRRHA+W+EFIE+FPYVI +KKGKEN++ADALSRRYTLL+ L  K + L+ +K   + 
Sbjct: 929  KLNRRHAKWVEFIESFPYVIKHKKGKENIIADALSRRYTLLTQLDYKIFGLETIKDHMRM 988

Query: 207  ILVIM 193
            +L++M
Sbjct: 989  MLILM 993



 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 42/97 (43%), Positives = 59/97 (60%)
 Frame = -3

Query: 558  GKPLAYFSEKLNGAAVRYSTYDKELYALIRTLKHCQHYLWPKEFVVHTDHEALKFLKGQH 379
            G  +AY S +L      Y T+D EL A++  LK  +HYL      ++TDH++LK++  Q 
Sbjct: 1800 GHVVAYASRQLWPHEGNYPTHDLELAAVVHALKIWRHYLIGNRCEIYTDHKSLKYIFTQS 1859

Query: 378  KLNRRHARWMEFIETFPYVIHYKKGKENVVADALSRR 268
             LN R  RW+E I+ +   IHY  GK NVVADALS++
Sbjct: 1860 DLNLRQRRWLELIKDYDVGIHYHPGKANVVADALSQK 1896


>gb|ADB27475.1| gag-pol polyprotein [Cenchrus setaceus]
          Length = 287

 Score =  177 bits (449), Expect = 2e-42
 Identities = 80/115 (69%), Positives = 100/115 (86%)
 Frame = -3

Query: 558 GKPLAYFSEKLNGAAVRYSTYDKELYALIRTLKHCQHYLWPKEFVVHTDHEALKFLKGQH 379
           GKP+AYFSEKL+G  + YSTYDKELYAL+RTL+  QHYLWPKEFV+H+DHE+LK ++ Q 
Sbjct: 130 GKPVAYFSEKLSGPVLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQG 189

Query: 378 KLNRRHARWMEFIETFPYVIHYKKGKENVVADALSRRYTLLSTLQTKFWVLKCLK 214
           KLNRRHA+W+EFIE+FPYVI +KKGKEN++ADALSRRYTLL+ L  K + L+ +K
Sbjct: 190 KLNRRHAKWVEFIESFPYVIKHKKGKENIIADALSRRYTLLNQLDYKIFGLETIK 244


>gb|AAQ56339.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1234

 Score =  177 bits (449), Expect = 2e-42
 Identities = 80/115 (69%), Positives = 100/115 (86%)
 Frame = -3

Query: 558  GKPLAYFSEKLNGAAVRYSTYDKELYALIRTLKHCQHYLWPKEFVVHTDHEALKFLKGQH 379
            GKP+AYFSEKL+G  + YSTYDKELYAL+RTL+  QHYLWPKEFV+H+DHE+LK ++ Q 
Sbjct: 849  GKPVAYFSEKLSGPVLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQG 908

Query: 378  KLNRRHARWMEFIETFPYVIHYKKGKENVVADALSRRYTLLSTLQTKFWVLKCLK 214
            KLNRRHA+W+EFIE+FPYVI +KKGKEN++ADALSRRYTLL+ L  K + L+ +K
Sbjct: 909  KLNRRHAKWVEFIESFPYVIKHKKGKENIIADALSRRYTLLTQLDYKIFGLETIK 963


>emb|CAN71870.1| hypothetical protein VITISV_044169 [Vitis vinifera]
          Length = 750

 Score =  177 bits (448), Expect = 2e-42
 Identities = 81/106 (76%), Positives = 93/106 (87%)
 Frame = -3

Query: 555 KPLAYFSEKLNGAAVRYSTYDKELYALIRTLKHCQHYLWPKEFVVHTDHEALKFLKGQHK 376
           +P+AYFSEKLNGAA+ Y  YDKELYAL+R L+  QHYLWPKEFV+H DHE+LK LKGQ K
Sbjct: 346 QPIAYFSEKLNGAALNYPKYDKELYALVRALETWQHYLWPKEFVIHADHESLKHLKGQGK 405

Query: 375 LNRRHARWMEFIETFPYVIHYKKGKENVVADALSRRYTLLSTLQTK 238
           LNRRHA+W+EFIETFPYVI YK+GKEN+VADALSRRY L+STL  K
Sbjct: 406 LNRRHAKWVEFIETFPYVIKYKQGKENIVADALSRRYALVSTLNAK 451


>emb|CAE02877.1| OSJNBb0022F23.14 [Oryza sativa Japonica Group]
          Length = 1431

 Score =  177 bits (448), Expect = 2e-42
 Identities = 80/115 (69%), Positives = 99/115 (86%)
 Frame = -3

Query: 558  GKPLAYFSEKLNGAAVRYSTYDKELYALIRTLKHCQHYLWPKEFVVHTDHEALKFLKGQH 379
            GKP+AYFSEKL G  + YSTYDKELYAL+RTL+  QHYLWPKEFV+H+DHE+LK ++ Q 
Sbjct: 978  GKPVAYFSEKLTGPVLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQG 1037

Query: 378  KLNRRHARWMEFIETFPYVIHYKKGKENVVADALSRRYTLLSTLQTKFWVLKCLK 214
            KLNRRHA+W+EFIE+FPYVI +KKGKEN++ADALSRRYTLL+ L  K + L+ +K
Sbjct: 1038 KLNRRHAKWVEFIESFPYVIKHKKGKENIIADALSRRYTLLTQLDYKIFGLETIK 1092


>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1713

 Score =  176 bits (447), Expect = 3e-42
 Identities = 80/116 (68%), Positives = 99/116 (85%)
 Frame = -3

Query: 558  GKPLAYFSEKLNGAAVRYSTYDKELYALIRTLKHCQHYLWPKEFVVHTDHEALKFLKGQH 379
            G+P+AYFSEKL GA + YS YDKELYAL+R L+  QHYLWPKEFV+H+DHEALK+LKGQ 
Sbjct: 1036 GQPVAYFSEKLGGAQLNYSVYDKELYALVRALETWQHYLWPKEFVIHSDHEALKYLKGQA 1095

Query: 378  KLNRRHARWMEFIETFPYVIHYKKGKENVVADALSRRYTLLSTLQTKFWVLKCLKK 211
            KLNRRHA+W+EFIETFPYV+ YKKGKEN+VADALSR+  LL+ L+ K   ++ +K+
Sbjct: 1096 KLNRRHAKWVEFIETFPYVVKYKKGKENIVADALSRKNVLLNQLEVKVTGIESIKE 1151



 Score = 87.0 bits (214), Expect = 3e-15
 Identities = 39/80 (48%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
 Frame = -2

Query: 241  KILGFEMLKEMYSSDHDFKEIF*KCLLAP-FGKYFLHEGFLYCEGRLCIPSCSTRILLVK 65
            K+ G E +KE+YS+D DF E + KC     + KY +H+GFL+   +LC+P CS R+LL++
Sbjct: 1142 KVTGIESIKELYSADLDFSEPYAKCTAGKGWEKYHIHDGFLFRANKLCVPHCSVRLLLLQ 1201

Query: 64   EAYCGGLMVHFGVTKTYEIL 5
            E + GGLM HFG  KTY++L
Sbjct: 1202 ETHAGGLMGHFGWRKTYDML 1221


>gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group]
           gi|52353557|gb|AAU44123.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 681

 Score =  176 bits (447), Expect = 3e-42
 Identities = 80/116 (68%), Positives = 99/116 (85%)
 Frame = -3

Query: 558 GKPLAYFSEKLNGAAVRYSTYDKELYALIRTLKHCQHYLWPKEFVVHTDHEALKFLKGQH 379
           G+P+AYFSEKL GA + YS YDKELYAL+R L+  QHYLWPKEFV+H+DHEALK+LKGQ 
Sbjct: 4   GQPVAYFSEKLGGAQLNYSVYDKELYALVRALETWQHYLWPKEFVIHSDHEALKYLKGQA 63

Query: 378 KLNRRHARWMEFIETFPYVIHYKKGKENVVADALSRRYTLLSTLQTKFWVLKCLKK 211
           KLNRRHA+W+EFIETFPYV+ YKKGKEN+VADALSR+  LL+ L+ K   ++ +K+
Sbjct: 64  KLNRRHAKWVEFIETFPYVVKYKKGKENIVADALSRKNVLLNQLEVKVTGIESIKE 119



 Score = 87.0 bits (214), Expect = 3e-15
 Identities = 39/80 (48%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
 Frame = -2

Query: 241 KILGFEMLKEMYSSDHDFKEIF*KCLLAP-FGKYFLHEGFLYCEGRLCIPSCSTRILLVK 65
           K+ G E +KE+YS+D DF E + KC     + KY +H+GFL+   +LC+P CS R+LL++
Sbjct: 110 KVTGIESIKELYSADLDFSEPYAKCTAGKGWEKYHIHDGFLFRANKLCVPHCSVRLLLLQ 169

Query: 64  EAYCGGLMVHFGVTKTYEIL 5
           E + GGLM HFG  KTY++L
Sbjct: 170 ETHAGGLMGHFGWRKTYDML 189


>emb|CAH66606.1| H0211A12.9 [Oryza sativa Indica Group]
          Length = 1667

 Score =  176 bits (446), Expect = 4e-42
 Identities = 80/115 (69%), Positives = 99/115 (86%)
 Frame = -3

Query: 558  GKPLAYFSEKLNGAAVRYSTYDKELYALIRTLKHCQHYLWPKEFVVHTDHEALKFLKGQH 379
            GKP+AYFSEKL+G  + YSTYDKELYAL+RTL+  QHYLWPKEFV+H+DHE+LK +  Q 
Sbjct: 956  GKPVAYFSEKLSGPVLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIHSQG 1015

Query: 378  KLNRRHARWMEFIETFPYVIHYKKGKENVVADALSRRYTLLSTLQTKFWVLKCLK 214
            KLNRRHA+W+EFIE+FPYVI +KKGKEN++ADALSRRYTLL+ L  K + L+ +K
Sbjct: 1016 KLNRRHAKWVEFIESFPYVIKHKKGKENIIADALSRRYTLLTQLDYKIFGLETIK 1070