BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00022761
         (359 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY03567.1| Pentatricopeptide repeat-containing protein, puta...    60   2e-12
ref|XP_006644161.1| PREDICTED: pentatricopeptide repeat-containi...    53   4e-09
gb|EMT28278.1| Malate dehydrogenase, chloroplastic [Aegilops tau...    50   2e-06
gb|EMS47599.1| hypothetical protein TRIUR3_32599 [Triticum urartu]     50   4e-06

>gb|EOY03567.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
           cacao]
          Length = 790

 Score = 60.1 bits (144), Expect(2) = 2e-12
 Identities = 30/60 (50%), Positives = 41/60 (68%)
 Frame = +2

Query: 179 LTESRRIFNKIIDGNPYLWKSVSLVYSRAGHNDEVLRVYLEIKQRRIGVDTSVITFCLKS 358
           L ESR +F++II+ N  L  ++ + Y R G   EVLR+YL +K+ +IG D S ITFCLKS
Sbjct: 84  LAESRCVFDRIINNNLSLCNAILVGYFRNGQCSEVLRLYLNLKKNKIGFDGSAITFCLKS 143



 Score = 37.7 bits (86), Expect(2) = 2e-12
 Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 11/51 (21%)
 Frame = +1

Query: 37  QQNPLPVSLSFIS-----------ENFASILDHCLDVDYLKKVHACIFVNG 156
           ++NP+P S  F S           E FAS+L++C D+  L+K+HACIF  G
Sbjct: 14  KKNPIP-SFKFQSLFLYHSTSNEVEKFASLLENCRDIVSLRKLHACIFTLG 63


>ref|XP_006644161.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like isoform X1 [Oryza brachyantha]
           gi|573912922|ref|XP_006644162.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g21300-like isoform X2 [Oryza brachyantha]
          Length = 804

 Score = 52.8 bits (125), Expect(2) = 4e-09
 Identities = 27/60 (45%), Positives = 36/60 (60%)
 Frame = +2

Query: 179 LTESRRIFNKIIDGNPYLWKSVSLVYSRAGHNDEVLRVYLEIKQRRIGVDTSVITFCLKS 358
           L ESR +F KI   +  LW S  + Y RAG+ +EV+ +Y  +K  +IG D   ITF LKS
Sbjct: 96  LPESRLVFQKIASDDLSLWNSTMVDYFRAGYPEEVIILYKRLKLHQIGFDGKTITFVLKS 155



 Score = 33.5 bits (75), Expect(2) = 4e-09
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +1

Query: 76  ENFASILDHCLDVDYLKKVHACIFVNG 156
           + FAS++  C DV +LKK+H  +F +G
Sbjct: 49  DKFASLIQGCADVRFLKKIHGRVFTHG 75


>gb|EMT28278.1| Malate dehydrogenase, chloroplastic [Aegilops tauschii]
          Length = 1360

 Score = 50.4 bits (119), Expect(2) = 2e-06
 Identities = 24/69 (34%), Positives = 41/69 (59%)
 Frame = +2

Query: 152 MGIIREVDLLTESRRIFNKIIDGNPYLWKSVSLVYSRAGHNDEVLRVYLEIKQRRIGVDT 331
           +G+   +  L +SR +F  I++G+  LW S  + Y RAG+ +EV+ +Y  +K  +  ++ 
Sbjct: 74  LGLYAHLGALPDSRLVFQSIVNGDLALWNSAMVDYFRAGYVEEVILLYRRLKLHQFCLNE 133

Query: 332 SVITFCLKS 358
             ITF LKS
Sbjct: 134 KTITFGLKS 142



 Score = 26.9 bits (58), Expect(2) = 2e-06
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 73  SENFASILDHCLDVDYLKKVHACIFVNG 156
           +E  A ++  C DV  LKK+HA +  +G
Sbjct: 35  AEKLALLVQSCADVRSLKKLHARVLAHG 62


>gb|EMS47599.1| hypothetical protein TRIUR3_32599 [Triticum urartu]
          Length = 936

 Score = 49.7 bits (117), Expect(2) = 4e-06
 Identities = 24/69 (34%), Positives = 41/69 (59%)
 Frame = +2

Query: 152 MGIIREVDLLTESRRIFNKIIDGNPYLWKSVSLVYSRAGHNDEVLRVYLEIKQRRIGVDT 331
           +G+   +  L +SR +F  I++G+  LW S  + Y RAG+ +EV+ +Y  +K  +  ++ 
Sbjct: 74  LGLYAHLGALPDSRLVFQSIVNGDLALWNSAMVDYFRAGYLEEVILLYRRLKLLQFCLNE 133

Query: 332 SVITFCLKS 358
             ITF LKS
Sbjct: 134 KAITFGLKS 142



 Score = 26.6 bits (57), Expect(2) = 4e-06
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 73  SENFASILDHCLDVDYLKKVHACIFVNG 156
           +E  A ++  C DV  LKK+HA +  +G
Sbjct: 35  AEKLALLVQSCSDVRSLKKLHARVLAHG 62