BLASTX nr result
ID: Catharanthus23_contig00022689
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00022689
(1621 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006351831.1| PREDICTED: pentatricopeptide repeat-containi... 545 e-152
ref|XP_004230611.1| PREDICTED: pentatricopeptide repeat-containi... 543 e-152
ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containi... 438 e-120
gb|EOY30252.1| Pentatricopeptide repeat superfamily protein, put... 436 e-119
ref|XP_002512275.1| pentatricopeptide repeat-containing protein,... 428 e-117
ref|XP_006381622.1| pentatricopeptide repeat-containing family p... 426 e-116
ref|XP_002326124.1| predicted protein [Populus trichocarpa] 426 e-116
ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containi... 426 e-116
ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containi... 426 e-116
ref|XP_004301429.1| PREDICTED: pentatricopeptide repeat-containi... 424 e-116
gb|EXB38956.1| hypothetical protein L484_027391 [Morus notabilis] 418 e-114
ref|XP_006474728.1| PREDICTED: pentatricopeptide repeat-containi... 417 e-114
ref|XP_006452806.1| hypothetical protein CICLE_v10007804mg [Citr... 416 e-113
ref|XP_003550612.1| PREDICTED: pentatricopeptide repeat-containi... 403 e-109
ref|XP_002885810.1| pentatricopeptide repeat-containing protein ... 388 e-105
dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana] 385 e-104
ref|NP_178657.1| pentatricopeptide repeat-containing protein [Ar... 385 e-104
ref|XP_006297396.1| hypothetical protein CARUB_v10013421mg [Caps... 382 e-103
ref|XP_006577946.1| PREDICTED: pentatricopeptide repeat-containi... 375 e-101
ref|XP_006396122.1| hypothetical protein EUTSA_v10002477mg [Eutr... 370 e-100
>ref|XP_006351831.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
isoform X1 [Solanum tuberosum]
gi|565370447|ref|XP_006351832.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g06000-like isoform X2 [Solanum tuberosum]
Length = 550
Score = 545 bits (1403), Expect = e-152
Identities = 271/471 (57%), Positives = 348/471 (73%)
Frame = -3
Query: 1415 MPLWIKRAPRNITFKSIARCFHGISNIESSPPTHNKIESLWFIKFVCTLCIRNAENLAIF 1236
MPLW++RA + IAR FHG+++ +S P E++WF K VC LC ++++L +F
Sbjct: 1 MPLWVQRASNILL---IAR-FHGLTSSKSIPSYGPGPEAVWFTKVVCLLCFHHSQSLDVF 56
Query: 1235 GSDYFRKNLCPPIAFYVIQHINNNFCKPRLAFEFFQFTRLNLNLIHSIATFNLLLRSLCQ 1056
GSDYFR+NL P IAF VI HIN N PRLAF F Q TR+NLNL+H I +FNLLLRSL Q
Sbjct: 57 GSDYFRQNLDPHIAFTVIHHINTNLNNPRLAFRFLQCTRINLNLVHCIGSFNLLLRSLSQ 116
Query: 1055 MGLLDLANLVVEYMNADGLSLDGPLLEFLVSSVAHAGKFSIGREILISQAQLCLGKEEII 876
MG D A LV ++M ADG L+ +LE +V ++A+AGKF I +EILISQA+L + I+
Sbjct: 117 MGFHDSAMLVFKFMKADGYLLENSILESVVLALANAGKFEIAKEILISQAELGREEGRIV 176
Query: 875 NSFVHNKFLSLLVKQNRVDEAFIFFRDHLLKLRSFCLDTCSFNIVIDGLCKAGQIDRAFE 696
FVHN LSLL+K++RVDEA FF+ H+L+ DTC+FN VI GLC+ G +D+AFE
Sbjct: 177 RPFVHNSLLSLLMKRSRVDEAVDFFKHHILRSERLFPDTCTFNTVIRGLCRVGGVDKAFE 236
Query: 695 VFNDMGSFGCFADITTYNSVINGLCKLGDADRALELLREIQSQGGLSPDVKTYTTIISGF 516
FNDMGSFGCF D TYN++INGLC +G +RA LL ++ Q GLSPDV TYT++I+G+
Sbjct: 237 FFNDMGSFGCFPDTVTYNTLINGLCSVGQVNRARGLLGNLELQDGLSPDVVTYTSVIAGY 296
Query: 515 FKLGRNHEALHLWDDMTHRGIRPNVYTFNVLIHGFGQSGDLGSALKIFESMSKFGCAPDV 336
KLGR EA++L D+MT GI PN+ TFN+LI+GFG+ GD+ SA++++ M G PDV
Sbjct: 297 CKLGRMDEAINLMDEMTTYGISPNLVTFNILINGFGKIGDMFSAIQMYGRMCAVGYPPDV 356
Query: 335 ITFTNLLSGYCQIGEIDQGLKLWDEMNARKLYPNAYTFSIVINSLCKSNRLNEARDLLSQ 156
+TFT+L+ GYC+ GE+DQGLKLWDEMN R L PN YTFSI+I++L K NRLNEAR+LL Q
Sbjct: 357 VTFTSLIDGYCRTGELDQGLKLWDEMNTRNLSPNLYTFSILISALSKENRLNEARELLRQ 416
Query: 155 LRWRNDILPQAFIYNPVIDGFCKAGNLDGANAIVAEMEEKKCNPDKYTFTI 3
L+ R+DI+PQ F+YNPV+DGFCKAGNL AN I AEME + C DK TFTI
Sbjct: 417 LKSRDDIVPQPFVYNPVLDGFCKAGNLSKANVIAAEMESRGCCHDKITFTI 467
Score = 97.8 bits (242), Expect = 1e-17
Identities = 70/294 (23%), Positives = 135/294 (45%), Gaps = 2/294 (0%)
Frame = -3
Query: 1145 AFEFFQFTRLNLNLIHSIATFNLLLRSLCQMGLLDLANLVVEYMNA-DGLSLDGPLLEFL 969
AFEFF + T+N L+ LC +G ++ A ++ + DGLS D +
Sbjct: 234 AFEFFNDMG-SFGCFPDTVTYNTLINGLCSVGQVNRARGLLGNLELQDGLSPDVVTYTSV 292
Query: 968 VSSVAHAGKFSIGREILISQAQLCLGKEEIINSFVHNKFLSLLVKQNRVDEAFIFFRDH- 792
++ G+ ++ + + + + N F ++ + F + +
Sbjct: 293 IAGYCKLGRMDEAINLMDEMTTYGISPNLVTFNILINGF-------GKIGDMFSAIQMYG 345
Query: 791 LLKLRSFCLDTCSFNIVIDGLCKAGQIDRAFEVFNDMGSFGCFADITTYNSVINGLCKLG 612
+ + D +F +IDG C+ G++D+ +++++M + ++ T++ +I+ L K
Sbjct: 346 RMCAVGYPPDVVTFTSLIDGYCRTGELDQGLKLWDEMNTRNLSPNLYTFSILISALSKEN 405
Query: 611 DADRALELLREIQSQGGLSPDVKTYTTIISGFFKLGRNHEALHLWDDMTHRGIRPNVYTF 432
+ A ELLR+++S+ + P Y ++ GF K G +A + +M RG + TF
Sbjct: 406 RLNEARELLRQLKSRDDIVPQPFVYNPVLDGFCKAGNLSKANVIAAEMESRGCCHDKITF 465
Query: 431 NVLIHGFGQSGDLGSALKIFESMSKFGCAPDVITFTNLLSGYCQIGEIDQGLKL 270
+LI G G + A+ IF+ M GC PD IT + L S + G + + K+
Sbjct: 466 TILILGHCMKGRMLEAMAIFDKMLSLGCVPDDITVSCLTSCLLKAGMVKEAYKV 519
>ref|XP_004230611.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
[Solanum lycopersicum]
Length = 550
Score = 543 bits (1399), Expect = e-152
Identities = 274/471 (58%), Positives = 348/471 (73%)
Frame = -3
Query: 1415 MPLWIKRAPRNITFKSIARCFHGISNIESSPPTHNKIESLWFIKFVCTLCIRNAENLAIF 1236
MPLW++RA NI+ IAR FHG+++ +S P E++WF K VC LC ++++L +F
Sbjct: 1 MPLWVQRAS-NISL--IAR-FHGLTSSKSIPSYGPGPEAVWFTKVVCLLCFHHSQSLDVF 56
Query: 1235 GSDYFRKNLCPPIAFYVIQHINNNFCKPRLAFEFFQFTRLNLNLIHSIATFNLLLRSLCQ 1056
GSDYFR+NL P IAF VI HIN N PRLAF F Q TR+NLNLIH I +FNLLLRSL Q
Sbjct: 57 GSDYFRQNLDPHIAFTVIHHINTNLNNPRLAFRFLQCTRINLNLIHCIGSFNLLLRSLSQ 116
Query: 1055 MGLLDLANLVVEYMNADGLSLDGPLLEFLVSSVAHAGKFSIGREILISQAQLCLGKEEII 876
MG D A LV +YM ADG L+ +LE +V ++A+AGKF I +EILISQA+L + I+
Sbjct: 117 MGFHDSAMLVFKYMKADGYLLENSILESVVLALANAGKFEIAKEILISQAELGREEGSIV 176
Query: 875 NSFVHNKFLSLLVKQNRVDEAFIFFRDHLLKLRSFCLDTCSFNIVIDGLCKAGQIDRAFE 696
FVHN LSLL+K++RVDEA FF+ H+L+ DTC+FN VI GLC+ G +D+AFE
Sbjct: 177 RPFVHNSLLSLLMKRSRVDEAVDFFKHHILRSERLFPDTCTFNTVIRGLCRVGGVDKAFE 236
Query: 695 VFNDMGSFGCFADITTYNSVINGLCKLGDADRALELLREIQSQGGLSPDVKTYTTIISGF 516
FNDMGSFGC D TYN++INGLC +G +RA LL +Q Q GLSPDV TYT++ISG+
Sbjct: 237 FFNDMGSFGCSPDTVTYNTLINGLCAVGQVNRAQGLLGNLQLQDGLSPDVVTYTSLISGY 296
Query: 515 FKLGRNHEALHLWDDMTHRGIRPNVYTFNVLIHGFGQSGDLGSALKIFESMSKFGCAPDV 336
KL R EA++L D+M GI PN+ TFN+LI+GFG+ GD+ SA+K++ M G PDV
Sbjct: 297 CKLSRMDEAINLMDEMITYGISPNLVTFNILINGFGKIGDMFSAIKMYGKMCAVGYPPDV 356
Query: 335 ITFTNLLSGYCQIGEIDQGLKLWDEMNARKLYPNAYTFSIVINSLCKSNRLNEARDLLSQ 156
+TFT+L+ GYC+ GE+DQGLKLWD+MN+R L PN YTFS++I++L K NRLNEAR+LL Q
Sbjct: 357 VTFTSLIDGYCRTGELDQGLKLWDDMNSRNLSPNLYTFSVLISALSKENRLNEARELLRQ 416
Query: 155 LRWRNDILPQAFIYNPVIDGFCKAGNLDGANAIVAEMEEKKCNPDKYTFTI 3
L+ R+DI+PQ F+YNPV+DGFCKAGNL AN I AEME K C DK TFTI
Sbjct: 417 LKSRDDIVPQPFVYNPVLDGFCKAGNLSEANVIAAEMESKGCCHDKITFTI 467
Score = 104 bits (259), Expect = 1e-19
Identities = 86/332 (25%), Positives = 148/332 (44%), Gaps = 40/332 (12%)
Frame = -3
Query: 1145 AFEFFQFTRLNLN-LIHSIATFNLLLRSLCQMGLLDLANLVVEYMNADGLSLDGPLLEFL 969
A +FF+ L L TFN ++R LC++G +D A M + G S D L
Sbjct: 197 AVDFFKHHILRSERLFPDTCTFNTVIRGLCRVGGVDKAFEFFNDMGSFGCSPDTVTYNTL 256
Query: 968 VSSVAHAGKFSIGREILISQAQLCLGKEEIINSF-----VHNKFLSLLVKQNRVDEAFIF 804
++ + G+ +++AQ LG ++ + + +S K +R+DEA I
Sbjct: 257 INGLCAVGQ--------VNRAQGLLGNLQLQDGLSPDVVTYTSLISGYCKLSRMDEA-IN 307
Query: 803 FRDHLL------KLRSFCL----------------------------DTCSFNIVIDGLC 726
D ++ L +F + D +F +IDG C
Sbjct: 308 LMDEMITYGISPNLVTFNILINGFGKIGDMFSAIKMYGKMCAVGYPPDVVTFTSLIDGYC 367
Query: 725 KAGQIDRAFEVFNDMGSFGCFADITTYNSVINGLCKLGDADRALELLREIQSQGGLSPDV 546
+ G++D+ ++++DM S ++ T++ +I+ L K + A ELLR+++S+ + P
Sbjct: 368 RTGELDQGLKLWDDMNSRNLSPNLYTFSVLISALSKENRLNEARELLRQLKSRDDIVPQP 427
Query: 545 KTYTTIISGFFKLGRNHEALHLWDDMTHRGIRPNVYTFNVLIHGFGQSGDLGSALKIFES 366
Y ++ GF K G EA + +M +G + TF +LI G G + AL IF+
Sbjct: 428 FVYNPVLDGFCKAGNLSEANVIAAEMESKGCCHDKITFTILILGHCMKGRMLEALAIFDK 487
Query: 365 MSKFGCAPDVITFTNLLSGYCQIGEIDQGLKL 270
M GC PD IT + L S + G + + K+
Sbjct: 488 MLSLGCVPDDITISCLTSCLLKAGMVKEAYKV 519
>ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
[Vitis vinifera]
Length = 641
Score = 438 bits (1127), Expect = e-120
Identities = 222/431 (51%), Positives = 301/431 (69%)
Frame = -3
Query: 1295 WFIKFVCTLCIRNAENLAIFGSDYFRKNLCPPIAFYVIQHINNNFCKPRLAFEFFQFTRL 1116
W +K +CTLC+R A DYF K L P IAF V++ +NN P LA +FFQ +R+
Sbjct: 76 WIVKVICTLCVRTHSLDACL--DYFSKTLTPSIAFEVVRGLNN----PELALKFFQLSRV 129
Query: 1115 NLNLIHSIATFNLLLRSLCQMGLLDLANLVVEYMNADGLSLDGPLLEFLVSSVAHAGKFS 936
NLNL HS T++ LLRSL +MG + A V + MN DG S D +L FLVSS AGKF+
Sbjct: 130 NLNLCHSFRTYSFLLRSLSEMGFHESAKAVYDCMNIDGHSPDASVLGFLVSSATDAGKFN 189
Query: 935 IGREILISQAQLCLGKEEIINSFVHNKFLSLLVKQNRVDEAFIFFRDHLLKLRSFCLDTC 756
I R + + L V+NK L+ LV+ N+VDEA FFR+ + F D+C
Sbjct: 190 IART-WVDGVEFSL--------VVYNKLLNQLVRGNQVDEAVCFFREQMGLHGPF--DSC 238
Query: 755 SFNIVIDGLCKAGQIDRAFEVFNDMGSFGCFADITTYNSVINGLCKLGDADRALELLREI 576
SFNI+I GLC+ G++D+AFE+FN+M FGC D+ TYN++ING C++ + DR +LL+E+
Sbjct: 239 SFNILIRGLCRIGKVDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKEL 298
Query: 575 QSQGGLSPDVKTYTTIISGFFKLGRNHEALHLWDDMTHRGIRPNVYTFNVLIHGFGQSGD 396
S+ LSPDV TYT+IISG+ KLG+ +A L+++M GI+PN +TFN+LI+GFG+ GD
Sbjct: 299 LSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGD 358
Query: 395 LGSALKIFESMSKFGCAPDVITFTNLLSGYCQIGEIDQGLKLWDEMNARKLYPNAYTFSI 216
+ SA ++E M GC PD+ITFT+L+ G+C+ G++++ LKLW E+NAR L PN YTF+I
Sbjct: 359 MVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAI 418
Query: 215 VINSLCKSNRLNEARDLLSQLRWRNDILPQAFIYNPVIDGFCKAGNLDGANAIVAEMEEK 36
+ N+LCK NRL+EAR L L+WR+ I+ Q F+YNPVIDGFCKAGN+D AN I+AEMEEK
Sbjct: 419 LTNALCKENRLHEARGFLRDLKWRH-IVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEK 477
Query: 35 KCNPDKYTFTI 3
+C PDK T+TI
Sbjct: 478 RCKPDKITYTI 488
Score = 109 bits (272), Expect = 4e-21
Identities = 84/312 (26%), Positives = 143/312 (45%), Gaps = 39/312 (12%)
Frame = -3
Query: 1088 TFNLLLRSLCQMGLLDLANLVVEYMNADGLSLDGPLLEFLVSSVAHAGKFSIGREILISQ 909
+FN+L+R LC++G +D A + M G S D L++ + G ++L
Sbjct: 239 SFNILIRGLCRIGKVDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLL--- 295
Query: 908 AQLCLGKEEIINSFV-HNKFLSLLVKQNRVDEAFIFFRDHL---LKLRSFCLDTCSFNIV 741
+ L K ++ V + +S K ++++A I F + + +K +F +FNI+
Sbjct: 296 -KELLSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAF-----TFNIL 349
Query: 740 IDGLCKAGQIDRAFEVFNDMGSFGCFADITTYNSVINGLCKLGDADRALELLREIQSQGG 561
I+G K G + A ++ +M GC DI T+ S+I+G C+ G +R+L+L E+ ++
Sbjct: 350 INGFGKVGDMVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARN- 408
Query: 560 LSPDVKT-----------------------------------YTTIISGFFKLGRNHEAL 486
LSP+ T Y +I GF K G EA
Sbjct: 409 LSPNEYTFAILTNALCKENRLHEARGFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEAN 468
Query: 485 HLWDDMTHRGIRPNVYTFNVLIHGFGQSGDLGSALKIFESMSKFGCAPDVITFTNLLSGY 306
+ +M + +P+ T+ +LI G G L A+ IF M GCAPD IT T+L+S
Sbjct: 469 VILAEMEEKRCKPDKITYTILIIGHCMKGRLSEAISIFNRMLGTGCAPDSITMTSLISCL 528
Query: 305 CQIGEIDQGLKL 270
+ G ++ ++
Sbjct: 529 LKAGMPNEAYRI 540
Score = 73.6 bits (179), Expect = 2e-10
Identities = 61/254 (24%), Positives = 113/254 (44%), Gaps = 3/254 (1%)
Frame = -3
Query: 1109 NLIHSIATFNLLLRSLCQMGLLDLANLVVEYMNADGLSLDGPLLEFLVSSVAHAGKFSIG 930
+L + T+ ++ C++G ++ A+++ M + G+ + L++ G +
Sbjct: 303 DLSPDVVTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDM-VS 361
Query: 929 REILISQAQLCLGKEEIINSFVHNKFLSLL---VKQNRVDEAFIFFRDHLLKLRSFCLDT 759
E + + L +II F SL+ + +V+ + + H L R+ +
Sbjct: 362 AENMYEEMLLLGCPPDIIT------FTSLIDGHCRTGKVERSLKLW--HELNARNLSPNE 413
Query: 758 CSFNIVIDGLCKAGQIDRAFEVFNDMGSFGCFADITTYNSVINGLCKLGDADRALELLRE 579
+F I+ + LCK ++ A D+ A YN VI+G CK G+ D A +L E
Sbjct: 414 YTFAILTNALCKENRLHEARGFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAE 473
Query: 578 IQSQGGLSPDVKTYTTIISGFFKLGRNHEALHLWDDMTHRGIRPNVYTFNVLIHGFGQSG 399
++ + PD TYT +I G GR EA+ +++ M G P+ T LI ++G
Sbjct: 474 MEEKR-CKPDKITYTILIIGHCMKGRLSEAISIFNRMLGTGCAPDSITMTSLISCLLKAG 532
Query: 398 DLGSALKIFESMSK 357
A +I + S+
Sbjct: 533 MPNEAYRIMQIASE 546
>gb|EOY30252.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao]
Length = 592
Score = 436 bits (1122), Expect = e-119
Identities = 220/431 (51%), Positives = 301/431 (69%)
Frame = -3
Query: 1295 WFIKFVCTLCIRNAENLAIFGSDYFRKNLCPPIAFYVIQHINNNFCKPRLAFEFFQFTRL 1116
WF+K VCTL + + + L Y KNL P I F V++ +NN P L +F +F+R+
Sbjct: 91 WFVKVVCTLFVYS-QPLDDSCLSYLSKNLTPLIEFEVVKWLNN----PALGLKFLEFSRV 145
Query: 1115 NLNLIHSIATFNLLLRSLCQMGLLDLANLVVEYMNADGLSLDGPLLEFLVSSVAHAGKFS 936
N N+ HS T+NLL+RS C MGL D A LV +YM DG D +L F++SS AG+F
Sbjct: 146 NFNIAHSFWTYNLLMRSFCHMGLHDSAKLVFDYMRIDGHLPDTTILGFMISSFGRAGEFG 205
Query: 935 IGREILISQAQLCLGKEEIINSFVHNKFLSLLVKQNRVDEAFIFFRDHLLKLRSFCLDTC 756
+ +++L E +I+ F N L+++VKQN+++EA ++++L +F D
Sbjct: 206 MAKKLLADVQS----DEVVISIFALNNLLNMMVKQNKLEEAVSLYKENLGS--NFYPDAW 259
Query: 755 SFNIVIDGLCKAGQIDRAFEVFNDMGSFGCFADITTYNSVINGLCKLGDADRALELLREI 576
+FNI+I GLC+ G++D+AFE+FNDMGSFGCF DI TYN++INGLCK+ + DR +LL ++
Sbjct: 260 TFNILIRGLCRVGKVDQAFELFNDMGSFGCFPDIVTYNTIINGLCKVNEVDRGHKLLNQV 319
Query: 575 QSQGGLSPDVKTYTTIISGFFKLGRNHEALHLWDDMTHRGIRPNVYTFNVLIHGFGQSGD 396
QS+ SPDV TYT++ISG+ KLG+ EA L+ +M G P V TFNVLI GFG+ GD
Sbjct: 320 QSRDDCSPDVVTYTSVISGYCKLGKMDEASALFHEMISSGTVPTVVTFNVLIDGFGKVGD 379
Query: 395 LGSALKIFESMSKFGCAPDVITFTNLLSGYCQIGEIDQGLKLWDEMNARKLYPNAYTFSI 216
+ SA ++E M+ FGC DV+TFT+L+ GYC+IG+++Q L+LW+ M R L PN YTF+I
Sbjct: 380 MVSAKSMYEQMASFGCIADVVTFTSLIDGYCRIGDVNQSLQLWNTMKGRDLSPNVYTFAI 439
Query: 215 VINSLCKSNRLNEARDLLSQLRWRNDILPQAFIYNPVIDGFCKAGNLDGANAIVAEMEEK 36
IN+LCK NRL+EAR L +L+ RN I+P+ FI+NPVIDGFCKAGNLD AN IVAEMEEK
Sbjct: 440 TINALCKENRLHEARGFLRELQCRN-IVPKPFIFNPVIDGFCKAGNLDEANLIVAEMEEK 498
Query: 35 KCNPDKYTFTI 3
+C+PDK TFTI
Sbjct: 499 QCHPDKVTFTI 509
>ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223548236|gb|EEF49727.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 532
Score = 428 bits (1100), Expect = e-117
Identities = 217/436 (49%), Positives = 302/436 (69%)
Frame = -3
Query: 1310 KIESLWFIKFVCTLCIRNAENLAIFGSDYFRKNLCPPIAFYVIQHINNNFCKPRLAFEFF 1131
K + WF+K + L +R+ + A K P +AF VI+ +NNN P++ +F
Sbjct: 24 KNQEAWFVKVIAILFVRSHCSDATSLGYLSEKLNDPLVAFEVIKRLNNN---PQVGLKFM 80
Query: 1130 QFTRLNLNLIHSIATFNLLLRSLCQMGLLDLANLVVEYMNADGLSLDGPLLEFLVSSVAH 951
+F RLN +LIH +T+ LL+RSLCQMGL DL +V+ YM +DG +D +L FLV+S A
Sbjct: 81 EFCRLNFSLIHCFSTYELLIRSLCQMGLHDLVEMVIGYMRSDGHLIDSRVLGFLVTSFAQ 140
Query: 950 AGKFSIGREILISQAQLCLGKEEIINSFVHNKFLSLLVKQNRVDEAFIFFRDHLLKLRSF 771
AGKF + ++++I G+E I+SFV+N L+ LVK +V EA F+++L
Sbjct: 141 AGKFDLAKKLIIEVQ----GEEARISSFVYNYLLNELVKGGKVHEAIFLFKENLAFHSP- 195
Query: 770 CLDTCSFNIVIDGLCKAGQIDRAFEVFNDMGSFGCFADITTYNSVINGLCKLGDADRALE 591
+T +FNI+I GLC+ G++++ FE+FN M SFGC D+ TYN++I+GLCK + DRA +
Sbjct: 196 -PNTWTFNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACD 254
Query: 590 LLREIQSQGGLSPDVKTYTTIISGFFKLGRNHEALHLWDDMTHRGIRPNVYTFNVLIHGF 411
LL+E+QS+ SPDV TYT+IISGF KLG+ A L+++M GI P V TFNVLI GF
Sbjct: 255 LLKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGF 314
Query: 410 GQSGDLGSALKIFESMSKFGCAPDVITFTNLLSGYCQIGEIDQGLKLWDEMNARKLYPNA 231
G+ G++ +A + E M+ + C PDV+TFT+L+ GYC+ G+I GLK+WD M AR + PN
Sbjct: 315 GKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNI 374
Query: 230 YTFSIVINSLCKSNRLNEARDLLSQLRWRNDILPQAFIYNPVIDGFCKAGNLDGANAIVA 51
YT+S++IN+LCK NR++EARDLL QL+ +D+ P+ FIYNPVIDGFCKAGN+D AN IV
Sbjct: 375 YTYSVIINALCKDNRIHEARDLLRQLKC-SDVFPKPFIYNPVIDGFCKAGNVDEANVIVT 433
Query: 50 EMEEKKCNPDKYTFTI 3
EMEEK+C PDK TFTI
Sbjct: 434 EMEEKRCRPDKVTFTI 449
Score = 67.0 bits (162), Expect = 2e-08
Identities = 67/294 (22%), Positives = 124/294 (42%), Gaps = 32/294 (10%)
Frame = -3
Query: 1142 FEFFQFTRLNLNLIHSIATFNLLLRSLCQMGLLDLA-NLVVEYMNADGLSLDGPLLEFLV 966
FE F + + + + T+N L+ LC+ LD A +L+ E + + S D ++
Sbjct: 218 FELFNAMQ-SFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYTSII 276
Query: 965 SSVAHAGKFSIGREILISQAQLCLGKEEIINSF------------------VHNK----- 855
S GK ++ + + G E + +F +H K
Sbjct: 277 SGFRKLGKLEAAS--VLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASYS 334
Query: 854 -------FLSLLVKQNRVDEAFIFFRD-HLLKLRSFCLDTCSFNIVIDGLCKAGQIDRAF 699
F SL+ R + + + ++K R+ + +++++I+ LCK +I A
Sbjct: 335 CIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINALCKDNRIHEAR 394
Query: 698 EVFNDMGSFGCFADITTYNSVINGLCKLGDADRALELLREIQSQGGLSPDVKTYTTIISG 519
++ + F YN VI+G CK G+ D A ++ E++ + PD T+T +I G
Sbjct: 395 DLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVIVTEMEEKR-CRPDKVTFTILIIG 453
Query: 518 FFKLGRNHEALHLWDDMTHRGIRPNVYTFNVLIHGFGQSGDLGSALKIFESMSK 357
GR EAL ++ M G P+ T + L+ ++G A I ++ S+
Sbjct: 454 HCMKGRMVEALDIFKKMLAIGCAPDNITISSLVACLLKAGKPSEAFHIVQTASE 507
>ref|XP_006381622.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550336330|gb|ERP59419.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 511
Score = 426 bits (1095), Expect = e-116
Identities = 213/408 (52%), Positives = 290/408 (71%)
Frame = -3
Query: 1226 YFRKNLCPPIAFYVIQHINNNFCKPRLAFEFFQFTRLNLNLIHSIATFNLLLRSLCQMGL 1047
Y + L P IAF VI+ NN P++ F+F +F+RLNLN+ H +T+NLL+RSLCQMG
Sbjct: 33 YPDRQLTPLIAFEVIKRFNN----PKVGFKFLEFSRLNLNVNHCYSTYNLLMRSLCQMGH 88
Query: 1046 LDLANLVVEYMNADGLSLDGPLLEFLVSSVAHAGKFSIGREILISQAQLCLGKEEIINSF 867
DL N+V +YM +DG D LL FLV+ +A A F + +++L ++ Q GKE INSF
Sbjct: 89 HDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLL-AEVQ---GKEVRINSF 144
Query: 866 VHNKFLSLLVKQNRVDEAFIFFRDHLLKLRSFCLDTCSFNIVIDGLCKAGQIDRAFEVFN 687
V+N LS+LVKQN+V EA F+++L DT +FNI+I GLC+ G +DRAFEVF
Sbjct: 145 VYNNLLSVLVKQNQVHEAIYLFKEYLAMQSP---DTWTFNILIRGLCRVGGVDRAFEVFK 201
Query: 686 DMGSFGCFADITTYNSVINGLCKLGDADRALELLREIQSQGGLSPDVKTYTTIISGFFKL 507
DM SFGC D+ TYN++INGLCK + R EL +EIQS+ SPD+ TYT+IISGF K
Sbjct: 202 DMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKS 261
Query: 506 GRNHEALHLWDDMTHRGIRPNVYTFNVLIHGFGQSGDLGSALKIFESMSKFGCAPDVITF 327
G+ EA +L+++M GI+PNV TFNVLI GFG+ G++ A ++ M+ F C+ DV+TF
Sbjct: 262 GKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTF 321
Query: 326 TNLLSGYCQIGEIDQGLKLWDEMNARKLYPNAYTFSIVINSLCKSNRLNEARDLLSQLRW 147
T+L+ GYC+ G+++ GLK W+ M R + P YT++++IN+LCK NRLNEARD L Q++
Sbjct: 322 TSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIK- 380
Query: 146 RNDILPQAFIYNPVIDGFCKAGNLDGANAIVAEMEEKKCNPDKYTFTI 3
+ I+P+ F+YNPVIDGFCKAGN+D N I+ EMEEK+C+PDK TFTI
Sbjct: 381 NSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTI 428
Score = 66.6 bits (161), Expect = 3e-08
Identities = 58/271 (21%), Positives = 114/271 (42%), Gaps = 6/271 (2%)
Frame = -3
Query: 1169 NNFCKP---RLAFEFFQFTRLNLNLIHSIATFNLLLRSLCQMGLLDLANLVVEYMNADGL 999
N CK + E F+ + + I T+ ++ C+ G + A+ + E M G+
Sbjct: 220 NGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGI 279
Query: 998 SLDGPLLEFLVSSVAHAGKFSIGREILISQAQLCLGKEEIINSFVHNKFLSLL---VKQN 828
+ L+ G + + A + + F SL+ +
Sbjct: 280 QPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVT-------FTSLIDGYCRAG 332
Query: 827 RVDEAFIFFRDHLLKLRSFCLDTCSFNIVIDGLCKAGQIDRAFEVFNDMGSFGCFADITT 648
+V+ F+ +++K R+ ++ ++I+ LCK +++ A + + +
Sbjct: 333 QVNHGLKFW--NVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFM 390
Query: 647 YNSVINGLCKLGDADRALELLREIQSQGGLSPDVKTYTTIISGFFKLGRNHEALHLWDDM 468
YN VI+G CK G+ D +L+E++ + PD T+T +I G GR EA+++++ M
Sbjct: 391 YNPVIDGFCKAGNVDEGNVILKEMEEKR-CDPDKVTFTILIIGHCVKGRMFEAINIFNRM 449
Query: 467 THRGIRPNVYTFNVLIHGFGQSGDLGSALKI 375
P+ T N LI ++G A +I
Sbjct: 450 LATRCAPDNITVNSLISCLLKAGMPNEAYRI 480
>ref|XP_002326124.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 426 bits (1095), Expect = e-116
Identities = 213/408 (52%), Positives = 291/408 (71%)
Frame = -3
Query: 1226 YFRKNLCPPIAFYVIQHINNNFCKPRLAFEFFQFTRLNLNLIHSIATFNLLLRSLCQMGL 1047
Y + L P IAF VI+ NN P++ F+F +F+RLNLN+ H +T+NLL+RSLCQMG
Sbjct: 33 YPDRQLTPLIAFEVIKRFNN----PKVGFKFLEFSRLNLNVNHCYSTYNLLMRSLCQMGH 88
Query: 1046 LDLANLVVEYMNADGLSLDGPLLEFLVSSVAHAGKFSIGREILISQAQLCLGKEEIINSF 867
DL N+V +YM +DG D LL FLV+ +A A F + +++L ++ Q GKE INSF
Sbjct: 89 HDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLL-AEVQ---GKEVRINSF 144
Query: 866 VHNKFLSLLVKQNRVDEAFIFFRDHLLKLRSFCLDTCSFNIVIDGLCKAGQIDRAFEVFN 687
V+N LS+LVKQN+V EA F+++L+ DT +FNI+I GLC+ G +DRAFEVF
Sbjct: 145 VYNNLLSVLVKQNQVHEAIYLFKEYLVMQSP--PDTWTFNILIRGLCRVGGVDRAFEVFK 202
Query: 686 DMGSFGCFADITTYNSVINGLCKLGDADRALELLREIQSQGGLSPDVKTYTTIISGFFKL 507
DM SFGC D+ TYN++INGLCK + R EL +EIQS+ SPD+ TYT+IISGF K
Sbjct: 203 DMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKS 262
Query: 506 GRNHEALHLWDDMTHRGIRPNVYTFNVLIHGFGQSGDLGSALKIFESMSKFGCAPDVITF 327
G+ EA +L+++M GI+PNV TFNVLI GFG+ G++ A ++ M+ F C+ DV+TF
Sbjct: 263 GKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTF 322
Query: 326 TNLLSGYCQIGEIDQGLKLWDEMNARKLYPNAYTFSIVINSLCKSNRLNEARDLLSQLRW 147
T+L+ GYC+ G+++ GLK W+ M R + P YT++++IN+LCK NRLNEARD L Q++
Sbjct: 323 TSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIK- 381
Query: 146 RNDILPQAFIYNPVIDGFCKAGNLDGANAIVAEMEEKKCNPDKYTFTI 3
+ I+P+ F+YNPVIDGFCKAGN+D N I+ EMEEK+C+PDK TFTI
Sbjct: 382 NSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTI 429
Score = 66.6 bits (161), Expect = 3e-08
Identities = 58/271 (21%), Positives = 114/271 (42%), Gaps = 6/271 (2%)
Frame = -3
Query: 1169 NNFCKP---RLAFEFFQFTRLNLNLIHSIATFNLLLRSLCQMGLLDLANLVVEYMNADGL 999
N CK + E F+ + + I T+ ++ C+ G + A+ + E M G+
Sbjct: 221 NGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGI 280
Query: 998 SLDGPLLEFLVSSVAHAGKFSIGREILISQAQLCLGKEEIINSFVHNKFLSLL---VKQN 828
+ L+ G + + A + + F SL+ +
Sbjct: 281 QPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVT-------FTSLIDGYCRAG 333
Query: 827 RVDEAFIFFRDHLLKLRSFCLDTCSFNIVIDGLCKAGQIDRAFEVFNDMGSFGCFADITT 648
+V+ F+ +++K R+ ++ ++I+ LCK +++ A + + +
Sbjct: 334 QVNHGLKFW--NVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFM 391
Query: 647 YNSVINGLCKLGDADRALELLREIQSQGGLSPDVKTYTTIISGFFKLGRNHEALHLWDDM 468
YN VI+G CK G+ D +L+E++ + PD T+T +I G GR EA+++++ M
Sbjct: 392 YNPVIDGFCKAGNVDEGNVILKEMEEKR-CDPDKVTFTILIIGHCVKGRMFEAINIFNRM 450
Query: 467 THRGIRPNVYTFNVLIHGFGQSGDLGSALKI 375
P+ T N LI ++G A +I
Sbjct: 451 LATRCAPDNITVNSLISCLLKAGMPNEAYRI 481
>ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
[Cucumis sativus]
Length = 548
Score = 426 bits (1094), Expect = e-116
Identities = 217/431 (50%), Positives = 298/431 (69%)
Frame = -3
Query: 1295 WFIKFVCTLCIRNAENLAIFGSDYFRKNLCPPIAFYVIQHINNNFCKPRLAFEFFQFTRL 1116
W +K VCTL R+ A FG Y +NL P IAF VI+ F P L +FF+F+R
Sbjct: 48 WLVKVVCTLFFRSHSLNACFG--YLSRNLNPSIAFEVIKR----FSDPLLGLKFFEFSRT 101
Query: 1115 NLNLIHSIATFNLLLRSLCQMGLLDLANLVVEYMNADGLSLDGPLLEFLVSSVAHAGKFS 936
+L++ H+ T++LL+R+LC++GL D A +V + M +DG+ D +LE LVSS A GK
Sbjct: 102 HLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLD 161
Query: 935 IGREILISQAQLCLGKEEIINSFVHNKFLSLLVKQNRVDEAFIFFRDHLLKLRSFCLDTC 756
+ L C G + ++ FV+N L++LVKQN VDEA + FR+HL F D
Sbjct: 162 SAKNFL--NEVHCYGIK--VSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPY--FVPDVY 215
Query: 755 SFNIVIDGLCKAGQIDRAFEVFNDMGSFGCFADITTYNSVINGLCKLGDADRALELLREI 576
SFNI+I GLC+ G+ID+AFE F +MG+FGCF DI +YN++ING C++ + + +LL+E
Sbjct: 216 SFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKED 275
Query: 575 QSQGGLSPDVKTYTTIISGFFKLGRNHEALHLWDDMTHRGIRPNVYTFNVLIHGFGQSGD 396
G+SPDV TYT+IISG+ KLG A L+D+M GI+PN +TFNVLI GFG+ G+
Sbjct: 276 MLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGN 335
Query: 395 LGSALKIFESMSKFGCAPDVITFTNLLSGYCQIGEIDQGLKLWDEMNARKLYPNAYTFSI 216
+ SA+ ++E M GC PDV+TFT+L+ GYC+ GE++QGLKLW+EM R L PN YT+++
Sbjct: 336 MRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAV 395
Query: 215 VINSLCKSNRLNEARDLLSQLRWRNDILPQAFIYNPVIDGFCKAGNLDGANAIVAEMEEK 36
+IN+LCK NR+ EAR+ L L+ ++++P+ FIYNPVIDGFCKAG +D AN IVAEM+EK
Sbjct: 396 LINALCKENRIREARNFLRHLK-SSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEK 454
Query: 35 KCNPDKYTFTI 3
KC PDK TFTI
Sbjct: 455 KCRPDKITFTI 465
>ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
[Cucumis sativus]
Length = 548
Score = 426 bits (1094), Expect = e-116
Identities = 217/431 (50%), Positives = 298/431 (69%)
Frame = -3
Query: 1295 WFIKFVCTLCIRNAENLAIFGSDYFRKNLCPPIAFYVIQHINNNFCKPRLAFEFFQFTRL 1116
W +K VCTL R+ A FG Y +NL P IAF VI+ F P L +FF+F+R
Sbjct: 48 WLVKVVCTLFFRSHSLNACFG--YLSRNLNPSIAFEVIKR----FSDPLLGLKFFEFSRT 101
Query: 1115 NLNLIHSIATFNLLLRSLCQMGLLDLANLVVEYMNADGLSLDGPLLEFLVSSVAHAGKFS 936
+L++ H+ T++LL+R+LC++GL D A +V + M +DG+ D +LE LVSS A GK
Sbjct: 102 HLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLD 161
Query: 935 IGREILISQAQLCLGKEEIINSFVHNKFLSLLVKQNRVDEAFIFFRDHLLKLRSFCLDTC 756
+ L C G + ++ FV+N L++LVKQN VDEA + FR+HL F D
Sbjct: 162 SAKNFL--NEVHCYGIK--VSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPY--FVPDVY 215
Query: 755 SFNIVIDGLCKAGQIDRAFEVFNDMGSFGCFADITTYNSVINGLCKLGDADRALELLREI 576
SFNI+I GLC+ G+ID+AFE F +MG+FGCF DI +YN++ING C++ + + +LL+E
Sbjct: 216 SFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKED 275
Query: 575 QSQGGLSPDVKTYTTIISGFFKLGRNHEALHLWDDMTHRGIRPNVYTFNVLIHGFGQSGD 396
G+SPDV TYT+IISG+ KLG A L+D+M GI+PN +TFNVLI GFG+ G+
Sbjct: 276 MLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGN 335
Query: 395 LGSALKIFESMSKFGCAPDVITFTNLLSGYCQIGEIDQGLKLWDEMNARKLYPNAYTFSI 216
+ SA+ ++E M GC PDV+TFT+L+ GYC+ GE++QGLKLW+EM R L PN YT+++
Sbjct: 336 MRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAV 395
Query: 215 VINSLCKSNRLNEARDLLSQLRWRNDILPQAFIYNPVIDGFCKAGNLDGANAIVAEMEEK 36
+IN+LCK NR+ EAR+ L L+ ++++P+ FIYNPVIDGFCKAG +D AN IVAEM+EK
Sbjct: 396 LINALCKENRIREARNFLRHLK-SSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEK 454
Query: 35 KCNPDKYTFTI 3
KC PDK TFTI
Sbjct: 455 KCRPDKITFTI 465
>ref|XP_004301429.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
[Fragaria vesca subsp. vesca]
Length = 583
Score = 424 bits (1090), Expect = e-116
Identities = 217/432 (50%), Positives = 301/432 (69%), Gaps = 1/432 (0%)
Frame = -3
Query: 1295 WFIKFVCTLCIRNAENLAIFGSDYFRKNLCPPIAFYVIQHINNNFCKPRLAFEFFQFTRL 1116
WF+K V TL +R+ + G Y KNL P +AF VI+ +NN P+L FF+ ++
Sbjct: 84 WFVKVVYTLFLRSHSLDSYVG--YLSKNLTPSLAFEVIKRLNN----PKLGLRFFELSKF 137
Query: 1115 NLNLIHSIATFNLLLRSLCQMGLLDLANLVVEYMNADGLSLDGPLLEFLVSSVAHAGKFS 936
+LN+ H + T++ LLRSLCQMGL D A LV +YM DGLS + +LEFLVSS A G+
Sbjct: 138 SLNVNHGVWTYHYLLRSLCQMGLQDSAKLVFDYMRTDGLSPNESVLEFLVSSCAQMGRSD 197
Query: 935 IGREILISQAQLCLGKEEIINSFVHNKFLSLLVKQNRVDEAFIFFRDHLLKLRSFCL-DT 759
+ +IL +G ++SFV+N ++LVK NRVDEA FR ++ S+C D+
Sbjct: 198 LAEKILDEVHCSVVG----LSSFVYNNLFNVLVKLNRVDEAVCLFRKYV---GSYCCPDS 250
Query: 758 CSFNIVIDGLCKAGQIDRAFEVFNDMGSFGCFADITTYNSVINGLCKLGDADRALELLRE 579
+FNI+I GLC+ G +D+ E F+DM SFGC ++ TYN++I+GLC+ + DR +LLRE
Sbjct: 251 WTFNILIRGLCRTGAVDKGLEFFSDMRSFGCSPNVVTYNTLISGLCRAHEVDRGCDLLRE 310
Query: 578 IQSQGGLSPDVKTYTTIISGFFKLGRNHEALHLWDDMTHRGIRPNVYTFNVLIHGFGQSG 399
+Q + LSPDV T+T++ISG+ KLGR EA ++D+M G++P TFN LI G+G++G
Sbjct: 311 VQFRSELSPDVITFTSVISGYCKLGRMEEASAIFDEMIGCGLKPTAVTFNALIDGYGKAG 370
Query: 398 DLGSALKIFESMSKFGCAPDVITFTNLLSGYCQIGEIDQGLKLWDEMNARKLYPNAYTFS 219
D+ SA ++ESM G DVITFT+L+ GYC+ G ++ GL+LW EMNA+ + P+AYTFS
Sbjct: 371 DMSSAFSLYESMLFHGHCADVITFTSLIDGYCRAGHLNHGLQLWHEMNAKNVSPSAYTFS 430
Query: 218 IVINSLCKSNRLNEARDLLSQLRWRNDILPQAFIYNPVIDGFCKAGNLDGANAIVAEMEE 39
++IN+LCK NRL EARDLL +L+ N ++P++F+YNPVIDG CKAGN+D AN IVAEMEE
Sbjct: 431 VLINALCKGNRLCEARDLLRELKGSN-VVPKSFLYNPVIDGLCKAGNIDEANLIVAEMEE 489
Query: 38 KKCNPDKYTFTI 3
KKC PD+ TFTI
Sbjct: 490 KKCTPDRVTFTI 501
Score = 112 bits (281), Expect = 3e-22
Identities = 83/308 (26%), Positives = 147/308 (47%), Gaps = 3/308 (0%)
Frame = -3
Query: 1088 TFNLLLRSLCQMGLLDLANLVVEYMNADGLSLDGPLLEFLVSSVAHAGKFSIGREILISQ 909
TFN+L+R LC+ G +D M + G S + L+S + A + G ++L
Sbjct: 252 TFNILIRGLCRTGAVDKGLEFFSDMRSFGCSPNVVTYNTLISGLCRAHEVDRGCDLL--- 308
Query: 908 AQLCLGKEEIINSFVHNKFLSLLVKQNRVDEAFIFFRDHL---LKLRSFCLDTCSFNIVI 738
++ E + +S K R++EA F + + LK + +FN +I
Sbjct: 309 REVQFRSELSPDVITFTSVISGYCKLGRMEEASAIFDEMIGCGLKPTAV-----TFNALI 363
Query: 737 DGLCKAGQIDRAFEVFNDMGSFGCFADITTYNSVINGLCKLGDADRALELLREIQSQGGL 558
DG KAG + AF ++ M G AD+ T+ S+I+G C+ G + L+L E+ ++ +
Sbjct: 364 DGYGKAGDMSSAFSLYESMLFHGHCADVITFTSLIDGYCRAGHLNHGLQLWHEMNAKN-V 422
Query: 557 SPDVKTYTTIISGFFKLGRNHEALHLWDDMTHRGIRPNVYTFNVLIHGFGQSGDLGSALK 378
SP T++ +I+ K R EA L ++ + P + +N +I G ++G++ A
Sbjct: 423 SPSAYTFSVLINALCKGNRLCEARDLLRELKGSNVVPKSFLYNPVIDGLCKAGNIDEANL 482
Query: 377 IFESMSKFGCAPDVITFTNLLSGYCQIGEIDQGLKLWDEMNARKLYPNAYTFSIVINSLC 198
I M + C PD +TFT L+ G G + + + + +M + P+ T +I+ L
Sbjct: 483 IVAEMEEKKCTPDRVTFTILILGNSMKGRMSEAIGNFSKMLSIGCAPDKITIDSLISCLS 542
Query: 197 KSNRLNEA 174
K+ +EA
Sbjct: 543 KAGMPSEA 550
>gb|EXB38956.1| hypothetical protein L484_027391 [Morus notabilis]
Length = 570
Score = 418 bits (1074), Expect = e-114
Identities = 217/432 (50%), Positives = 289/432 (66%), Gaps = 1/432 (0%)
Frame = -3
Query: 1295 WFIKFVCTLCIRNAENLAIFGSDYFRKNLCPPIAFYVIQHINNNFCKPRLAFEFFQFTRL 1116
WF+K V TL +R+ FG Y K L P I+F VI+ +NNN P L +FF+ +R
Sbjct: 75 WFVKVVSTLFVRSQSLNTFFG--YLSKKLTPSISFEVIKRLNNN---PNLGLKFFELSRA 129
Query: 1115 NLNLIHSIATFNLLLRSLCQMGLLDLANLVVEYMNADGLSLDGPLLEFLVSSVAHAGKFS 936
NL++ HS +T+NLL+RSLCQMG D A V + M DG S D +EFLV A GK
Sbjct: 130 NLSVNHSFSTYNLLIRSLCQMGFHDSAKFVFDCMRIDGHSPDNSTIEFLVCVFAKVGKLD 189
Query: 935 IGREILISQAQLCLGKEEI-INSFVHNKFLSLLVKQNRVDEAFIFFRDHLLKLRSFCLDT 759
++L EEI + FV++ ++LVK N+V EA FR + F DT
Sbjct: 190 SCEKLL----------EEIRASKFVYSSLFNVLVKNNKVYEAVCLFRKQIGS--HFVPDT 237
Query: 758 CSFNIVIDGLCKAGQIDRAFEVFNDMGSFGCFADITTYNSVINGLCKLGDADRALELLRE 579
+FNI+I GLC G++ AFE FNDMG F C D+ TYN++I+GLC+ + DR +LLRE
Sbjct: 238 WTFNILIGGLCGVGEVHSAFEFFNDMGKFRCSPDVVTYNTLISGLCRTNEVDRGCDLLRE 297
Query: 578 IQSQGGLSPDVKTYTTIISGFFKLGRNHEALHLWDDMTHRGIRPNVYTFNVLIHGFGQSG 399
+Q +G SP+V+T+T++I G+ KLGR EA L+D+M G RP TFNVLI F + G
Sbjct: 298 VQLRGDFSPNVRTFTSVILGYCKLGRMEEASALFDEMMDSGTRPTTVTFNVLIDAFSKVG 357
Query: 398 DLGSALKIFESMSKFGCAPDVITFTNLLSGYCQIGEIDQGLKLWDEMNARKLYPNAYTFS 219
D+ SA+ ++E M G PDV+TFT+L+ GYC++G++++GLKLW EM+ R + PN YT+S
Sbjct: 358 DMASAIALYEKMLFHGYRPDVVTFTSLIDGYCRVGQLNRGLKLWCEMSVRNVSPNGYTYS 417
Query: 218 IVINSLCKSNRLNEARDLLSQLRWRNDILPQAFIYNPVIDGFCKAGNLDGANAIVAEMEE 39
+VI++LCK NRL+EARDLL QL N I+P+ F+YNPVIDGFCKAGN+D AN IVAEMEE
Sbjct: 418 VVIHALCKVNRLHEARDLLRQLNCTN-IVPKPFMYNPVIDGFCKAGNVDEANMIVAEMEE 476
Query: 38 KKCNPDKYTFTI 3
K+CNPDK TFTI
Sbjct: 477 KRCNPDKMTFTI 488
Score = 60.5 bits (145), Expect = 2e-06
Identities = 50/247 (20%), Positives = 110/247 (44%)
Frame = -3
Query: 1097 SIATFNLLLRSLCQMGLLDLANLVVEYMNADGLSLDGPLLEFLVSSVAHAGKFSIGREIL 918
++ TF ++ C++G ++ A+ + + M G L+ + + G + I
Sbjct: 307 NVRTFTSVILGYCKLGRMEEASALFDEMMDSGTRPTTVTFNVLIDAFSKVG--DMASAIA 364
Query: 917 ISQAQLCLGKEEIINSFVHNKFLSLLVKQNRVDEAFIFFRDHLLKLRSFCLDTCSFNIVI 738
+ + L G + +F + + +++ + + + +R+ + ++++VI
Sbjct: 365 LYEKMLFHGYRPDVVTFT--SLIDGYCRVGQLNRGLKLWCE--MSVRNVSPNGYTYSVVI 420
Query: 737 DGLCKAGQIDRAFEVFNDMGSFGCFADITTYNSVINGLCKLGDADRALELLREIQSQGGL 558
LCK ++ A ++ + YN VI+G CK G+ D A ++ E++ +
Sbjct: 421 HALCKVNRLHEARDLLRQLNCTNIVPKPFMYNPVIDGFCKAGNVDEANMIVAEMEEKR-C 479
Query: 557 SPDVKTYTTIISGFFKLGRNHEALHLWDDMTHRGIRPNVYTFNVLIHGFGQSGDLGSALK 378
+PD T+T +I G GR +A+ ++ M G P+ T + L+ ++G A
Sbjct: 480 NPDKMTFTILILGNCMKGRMVDAIGVFYKMLAVGCAPDKITVHCLMSCLLKAGMPNEAFH 539
Query: 377 IFESMSK 357
I E++ K
Sbjct: 540 IKETVMK 546
>ref|XP_006474728.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
isoform X1 [Citrus sinensis]
gi|568841566|ref|XP_006474729.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g06000-like isoform X2 [Citrus sinensis]
Length = 595
Score = 417 bits (1072), Expect = e-114
Identities = 220/467 (47%), Positives = 315/467 (67%), Gaps = 5/467 (1%)
Frame = -3
Query: 1388 RNITFKSIARCFHGISNIESSPPTHNKIE-----SLWFIKFVCTLCIRNAENLAIFGSDY 1224
R T +IA FHG++N S P ++ WF+K VCTL +R++ L+ + Y
Sbjct: 59 RASTIAAIAH-FHGLANGGSRPFDEKEVNYRCSNEFWFVKVVCTLLLRSSY-LSDTCARY 116
Query: 1223 FRKNLCPPIAFYVIQHINNNFCKPRLAFEFFQFTRLNLNLIHSIATFNLLLRSLCQMGLL 1044
+ L P + VI+ ++N P+L +F +F+R+NL+L HS T+NL++RSLC+MGL
Sbjct: 117 LCEKLSPLNSLEVIKRLDN----PKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLH 172
Query: 1043 DLANLVVEYMNADGLSLDGPLLEFLVSSVAHAGKFSIGREILISQAQLCLGKEEIINSFV 864
D +V +YM +DG + P++EF VSS AGK + +L +Q G E +++F+
Sbjct: 173 DSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL---SQFRPG-EVTMSTFM 228
Query: 863 HNKFLSLLVKQNRVDEAFIFFRDHLLKLRSFCLDTCSFNIVIDGLCKAGQIDRAFEVFND 684
+N L+ LVKQN DEA F+++ DT +FNI+I GL + G++ +AFE F D
Sbjct: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQ--PDTWTFNILIQGLSRIGEVKKAFEFFYD 286
Query: 683 MGSFGCFADITTYNSVINGLCKLGDADRALELLREIQSQGGLSPDVKTYTTIISGFFKLG 504
MGSFGC DI TYN++I+GLC++ + R ELL+E++ + SPDV TYT++ISG+ KLG
Sbjct: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
Query: 503 RNHEALHLWDDMTHRGIRPNVYTFNVLIHGFGQSGDLGSALKIFESMSKFGCAPDVITFT 324
+ +A ++++M GI+P+ TFNVLI GFG+ G++ SA + E M FG PDV+TF+
Sbjct: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
Query: 323 NLLSGYCQIGEIDQGLKLWDEMNARKLYPNAYTFSIVINSLCKSNRLNEARDLLSQLRWR 144
+L+ GYC+ G+++QGLKL DEM + L PN YTF+I+IN+LCK NRLN+AR L QL+W
Sbjct: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW- 465
Query: 143 NDILPQAFIYNPVIDGFCKAGNLDGANAIVAEMEEKKCNPDKYTFTI 3
ND++P+ F+YNPVIDGFCKAGN+D AN IVAEMEEK+C PDK TFTI
Sbjct: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
>ref|XP_006452806.1| hypothetical protein CICLE_v10007804mg [Citrus clementina]
gi|557556032|gb|ESR66046.1| hypothetical protein
CICLE_v10007804mg [Citrus clementina]
Length = 595
Score = 416 bits (1069), Expect = e-113
Identities = 219/467 (46%), Positives = 314/467 (67%), Gaps = 5/467 (1%)
Frame = -3
Query: 1388 RNITFKSIARCFHGISNIESSPPTHNKIE-----SLWFIKFVCTLCIRNAENLAIFGSDY 1224
R T +IA FHG++N S P ++ WF+K VCTL +R++ L+ + Y
Sbjct: 59 RASTIAAIAH-FHGLANGGSRPFDEKEVNYRCSNEFWFVKVVCTLLLRSSY-LSDTCARY 116
Query: 1223 FRKNLCPPIAFYVIQHINNNFCKPRLAFEFFQFTRLNLNLIHSIATFNLLLRSLCQMGLL 1044
+ L P + VI+ ++N P+L +F +F+R+NL+L HS T+NL++RSLC+MGL
Sbjct: 117 LCEKLSPLNSLEVIKRLDN----PKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLH 172
Query: 1043 DLANLVVEYMNADGLSLDGPLLEFLVSSVAHAGKFSIGREILISQAQLCLGKEEIINSFV 864
D +V +YM +DG + P++EF VSS AGK + +L +Q G E +++F+
Sbjct: 173 DSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL---SQFRPG-EVTMSTFM 228
Query: 863 HNKFLSLLVKQNRVDEAFIFFRDHLLKLRSFCLDTCSFNIVIDGLCKAGQIDRAFEVFND 684
+N L+ LVKQN DEA F+++ DT +FNI+I GLC+ G++ +AFE F D
Sbjct: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQ--PDTWTFNILIRGLCRIGEVKKAFEFFYD 286
Query: 683 MGSFGCFADITTYNSVINGLCKLGDADRALELLREIQSQGGLSPDVKTYTTIISGFFKLG 504
MGSFGC DI TYN++I+GLC++ + R ELL+E++ + PDV TYT++ISG+ KLG
Sbjct: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFLPDVVTYTSVISGYCKLG 346
Query: 503 RNHEALHLWDDMTHRGIRPNVYTFNVLIHGFGQSGDLGSALKIFESMSKFGCAPDVITFT 324
+ +A ++++M GI+P+ TFNVLI GFG+ G++ SA + E M G PDV+TF+
Sbjct: 347 KMDKATSIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSLGYLPDVVTFS 406
Query: 323 NLLSGYCQIGEIDQGLKLWDEMNARKLYPNAYTFSIVINSLCKSNRLNEARDLLSQLRWR 144
+L+ GYC+ G+++QGLKL DEM + L PN YTF+I+IN+LCK NRLN+AR L QL+W
Sbjct: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFAILINALCKENRLNDARRFLKQLKW- 465
Query: 143 NDILPQAFIYNPVIDGFCKAGNLDGANAIVAEMEEKKCNPDKYTFTI 3
ND++P+ F+YNPVIDGFCKAGN+D AN IVAEMEEK+C PDK TFTI
Sbjct: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
Score = 60.5 bits (145), Expect = 2e-06
Identities = 45/194 (23%), Positives = 85/194 (43%)
Frame = -3
Query: 1139 EFFQFTRLNLNLIHSIATFNLLLRSLCQMGLLDLANLVVEYMNADGLSLDGPLLEFLVSS 960
E+ + L+L + + TF+ L+ C+ G L+ + + M LS + L+++
Sbjct: 387 EYMRERMLSLGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFAILINA 446
Query: 959 VAHAGKFSIGREILISQAQLCLGKEEIINSFVHNKFLSLLVKQNRVDEAFIFFRDHLLKL 780
+ + + R L + + + F++N + K VDEA + + ++
Sbjct: 447 LCKENRLNDARRFL----KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE--MEE 500
Query: 779 RSFCLDTCSFNIVIDGLCKAGQIDRAFEVFNDMGSFGCFADITTYNSVINGLCKLGDADR 600
+ D +F I+I G C G++ A +FN M GC D T NS+I+ L K G +
Sbjct: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
Query: 599 ALELLREIQSQGGL 558
A +++ L
Sbjct: 561 AFRIMQRASEDQNL 574
>ref|XP_003550612.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
[Glycine max]
Length = 544
Score = 403 bits (1035), Expect = e-109
Identities = 214/432 (49%), Positives = 303/432 (70%), Gaps = 1/432 (0%)
Frame = -3
Query: 1295 WFIKFVCTLCI-RNAENLAIFGSDYFRKNLCPPIAFYVIQHINNNFCKPRLAFEFFQFTR 1119
WF+K V TL + N+ + G YFR++L P V++ NN P L F+FF+FTR
Sbjct: 46 WFVKIVSTLFLCSNSLDDRFLG--YFREHLTPSHVLEVVKRFNN----PNLGFKFFRFTR 99
Query: 1118 LNLNLIHSIATFNLLLRSLCQMGLLDLANLVVEYMNADGLSLDGPLLEFLVSSVAHAGKF 939
L++ HS T+N+LLRSLCQ GL + A L+ + M +DG D LL FLVSS A A +F
Sbjct: 100 ERLSMSHSFWTYNMLLRSLCQAGLHNSAKLLYDSMRSDGQLPDSRLLGFLVSSFALADRF 159
Query: 938 SIGREILISQAQLCLGKEEIINSFVHNKFLSLLVKQNRVDEAFIFFRDHLLKLRSFCLDT 759
+ +E+L ++AQ C G + ++ V+N FL++L+K NR+D+A FR+ L++ S CLD
Sbjct: 160 DVSKELL-AEAQ-CSGVQ--VDVIVYNNFLNILIKHNRLDDAICLFRE-LMRSHS-CLDA 213
Query: 758 CSFNIVIDGLCKAGQIDRAFEVFNDMGSFGCFADITTYNSVINGLCKLGDADRALELLRE 579
+FNI+I GLC AG +D AFE+ DMGSFGC DI TYN +++GLC++ DRA +LL E
Sbjct: 214 FTFNILIRGLCTAGDVDEAFELLGDMGSFGCSPDIVTYNILLHGLCRIDQVDRARDLLEE 273
Query: 578 IQSQGGLSPDVKTYTTIISGFFKLGRNHEALHLWDDMTHRGIRPNVYTFNVLIHGFGQSG 399
+ + +P+V +YTT+ISG+ +L + EA L+ +M G +PNV+TF+ L+ GF ++G
Sbjct: 274 VCLKCEFAPNVVSYTTVISGYCRLSKMDEASSLFYEMVRSGTKPNVFTFSALVDGFVKAG 333
Query: 398 DLGSALKIFESMSKFGCAPDVITFTNLLSGYCQIGEIDQGLKLWDEMNARKLYPNAYTFS 219
D+ SAL + + + GCAP+VIT T+L++GYC+ G ++ GL LW EMNAR + N YT+S
Sbjct: 334 DMASALGMHKKILFHGCAPNVITLTSLINGYCRAGWVNHGLDLWREMNARNIPANLYTYS 393
Query: 218 IVINSLCKSNRLNEARDLLSQLRWRNDILPQAFIYNPVIDGFCKAGNLDGANAIVAEMEE 39
++I++LCKSNRL EAR+LL L+ ++DI+P AF+YNPVIDG+CK+GN+D ANAIVAEMEE
Sbjct: 394 VLISALCKSNRLQEARNLLRILK-QSDIVPLAFVYNPVIDGYCKSGNIDEANAIVAEMEE 452
Query: 38 KKCNPDKYTFTI 3
KC PDK TFTI
Sbjct: 453 -KCKPDKLTFTI 463
Score = 65.5 bits (158), Expect = 6e-08
Identities = 70/310 (22%), Positives = 122/310 (39%), Gaps = 68/310 (21%)
Frame = -3
Query: 1088 TFNLLLRSLCQMGLLDLANLVVEYMNADGLSLDGPLLEFLVSSVAHAGKFSIGREILISQ 909
TFN+L+R LC G +D A ++ M + G S D L+ + + R++L
Sbjct: 215 TFNILIRGLCTAGDVDEAFELLGDMGSFGCSPDIVTYNILLHGLCRIDQVDRARDLL--- 271
Query: 908 AQLCLGKEEIINSFVHNKFLSLLVKQNRVDEAFIFFR------------------DHLLK 783
++CL E N + +S + +++DEA F D +K
Sbjct: 272 EEVCLKCEFAPNVVSYTTVISGYCRLSKMDEASSLFYEMVRSGTKPNVFTFSALVDGFVK 331
Query: 782 L----------RSFCLDTCSFNIV-----IDGLCKAGQIDRAFEVFNDMGSFGCFADITT 648
+ C+ N++ I+G C+AG ++ +++ +M + A++ T
Sbjct: 332 AGDMASALGMHKKILFHGCAPNVITLTSLINGYCRAGWVNHGLDLWREMNARNIPANLYT 391
Query: 647 Y-----------------------------------NSVINGLCKLGDADRALELLREIQ 573
Y N VI+G CK G+ D A ++ E++
Sbjct: 392 YSVLISALCKSNRLQEARNLLRILKQSDIVPLAFVYNPVIDGYCKSGNIDEANAIVAEME 451
Query: 572 SQGGLSPDVKTYTTIISGFFKLGRNHEALHLWDDMTHRGIRPNVYTFNVLIHGFGQSGDL 393
+ PD T+T +I G GR EA+ ++ M G P+ T L +SG
Sbjct: 452 EK--CKPDKLTFTILIIGHCMKGRTPEAIGIFYKMLASGCTPDDITIRTLSSCLLKSGMP 509
Query: 392 GSALKIFESM 363
G A +I E++
Sbjct: 510 GEAARIKETL 519
>ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297331650|gb|EFH62069.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 536
Score = 388 bits (997), Expect = e-105
Identities = 211/469 (44%), Positives = 299/469 (63%), Gaps = 10/469 (2%)
Frame = -3
Query: 1379 TFKSIARCFHGISN--IESSPPTHNKIESL-----WFIKFVCTLCIRNAENLAIFGSDYF 1221
TF + FH S+ ++ P +N E + W +K V TL + + + Y
Sbjct: 5 TFATAIAHFHTHSHGGAQARPIQNNTREKIHCPEAWLVKIVSTLFVYRVPDSDLCFC-YL 63
Query: 1220 RKNLCPPIAFYVIQHINNNFCKPRLAFEFFQFTRLNLNLIHSIATFNLLLRSLCQMGLLD 1041
KNL P I+F V++ ++NN P + F F++F+R LN+ HS T+NLL RSLC+ G+ D
Sbjct: 64 SKNLNPFISFEVVKKLDNN---PHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGMHD 120
Query: 1040 LANLVVEYMNADGLSLDGPLLEFLVSSVAHAGKFSIGREILISQAQL---CLGKEEIINS 870
LA + E M +DG+S + LL FLVSS A GK +L+ ++ C+
Sbjct: 121 LAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCATALLLQSYEVEGCCM-------- 172
Query: 869 FVHNKFLSLLVKQNRVDEAFIFFRDHLLKLRSFCLDTCSFNIVIDGLCKAGQIDRAFEVF 690
V N L+ LVK +RV++A F +HL + +S C DT +FNI+I GLC G+ ++A E+
Sbjct: 173 -VVNSLLNTLVKLDRVEDAMKLFEEHL-RFQS-CNDTKTFNILIRGLCGVGKAEKAVELL 229
Query: 689 NDMGSFGCFADITTYNSVINGLCKLGDADRALELLREIQSQGGLSPDVKTYTTIISGFFK 510
M FGC DI TYN++I G CK + +A E+ +++S G SPDV TYT++ISG+ K
Sbjct: 230 GGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYTSMISGYCK 289
Query: 509 LGRNHEALHLWDDMTHRGIRPNVYTFNVLIHGFGQSGDLGSALKIFESMSKFGCAPDVIT 330
G+ EA L DDM GI P TFNVL+ G+ ++G++ +A +I M FGC PDV+T
Sbjct: 290 AGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVT 349
Query: 329 FTNLLSGYCQIGEIDQGLKLWDEMNARKLYPNAYTFSIVINSLCKSNRLNEARDLLSQLR 150
FT+L+ GYC++G+++QG +LW+EMNAR ++PNA+T+SI+IN+LCK NRL +AR+LL QL
Sbjct: 350 FTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLLKARELLGQLA 409
Query: 149 WRNDILPQAFIYNPVIDGFCKAGNLDGANAIVAEMEEKKCNPDKYTFTI 3
DI+PQ F+YNPVIDGFCKAG ++ A IV EME+KKC PDK TFTI
Sbjct: 410 -SKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTI 457
>dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
Length = 536
Score = 385 bits (990), Expect = e-104
Identities = 211/469 (44%), Positives = 299/469 (63%), Gaps = 10/469 (2%)
Frame = -3
Query: 1379 TFKSIARCFHGISN--IESSPPTHNKIESL-----WFIKFVCTLCIRNAENLAIFGSDYF 1221
TF + FH S+ ++ P +N E + W +K V TL + + + Y
Sbjct: 5 TFATAIAHFHTHSHGGAQARPLQNNTREVIHCPEAWLVKIVSTLFVYRVPDSDLCFC-YL 63
Query: 1220 RKNLCPPIAFYVIQHINNNFCKPRLAFEFFQFTRLNLNLIHSIATFNLLLRSLCQMGLLD 1041
KNL P I+F V++ ++NN P + F F++F+R LN+ HS T+NLL RSLC+ GL D
Sbjct: 64 SKNLNPFISFEVVKKLDNN---PHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHD 120
Query: 1040 LANLVVEYMNADGLSLDGPLLEFLVSSVAHAGKFSIGREILISQAQL---CLGKEEIINS 870
LA + E M +DG+S + LL FLVSS A GK +L+ ++ C+
Sbjct: 121 LAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCCM-------- 172
Query: 869 FVHNKFLSLLVKQNRVDEAFIFFRDHLLKLRSFCLDTCSFNIVIDGLCKAGQIDRAFEVF 690
V N L+ LVK +RV++A F +HL + +S C DT +FNI+I GLC G+ ++A E+
Sbjct: 173 -VVNSLLNTLVKLDRVEDAMKLFDEHL-RFQS-CNDTKTFNILIRGLCGVGKAEKALELL 229
Query: 689 NDMGSFGCFADITTYNSVINGLCKLGDADRALELLREIQSQGGLSPDVKTYTTIISGFFK 510
M FGC DI TYN++I G CK + ++A E+ ++++S SPDV TYT++ISG+ K
Sbjct: 230 GVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCK 289
Query: 509 LGRNHEALHLWDDMTHRGIRPNVYTFNVLIHGFGQSGDLGSALKIFESMSKFGCAPDVIT 330
G+ EA L DDM GI P TFNVL+ G+ ++G++ +A +I M FGC PDV+T
Sbjct: 290 AGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVT 349
Query: 329 FTNLLSGYCQIGEIDQGLKLWDEMNARKLYPNAYTFSIVINSLCKSNRLNEARDLLSQLR 150
FT+L+ GYC++G++ QG +LW+EMNAR ++PNA+T+SI+IN+LC NRL +AR+LL QL
Sbjct: 350 FTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLA 409
Query: 149 WRNDILPQAFIYNPVIDGFCKAGNLDGANAIVAEMEEKKCNPDKYTFTI 3
DI+PQ F+YNPVIDGFCKAG ++ AN IV EME+KKC PDK TFTI
Sbjct: 410 -SKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTI 457
>ref|NP_178657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42570711|ref|NP_973429.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|75216767|sp|Q9ZUE9.1|PP149_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g06000 gi|4006835|gb|AAC95177.1| hypothetical protein
[Arabidopsis thaliana] gi|110736272|dbj|BAF00106.1|
hypothetical protein [Arabidopsis thaliana]
gi|330250896|gb|AEC05990.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|330250897|gb|AEC05991.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 536
Score = 385 bits (990), Expect = e-104
Identities = 211/469 (44%), Positives = 299/469 (63%), Gaps = 10/469 (2%)
Frame = -3
Query: 1379 TFKSIARCFHGISN--IESSPPTHNKIESL-----WFIKFVCTLCIRNAENLAIFGSDYF 1221
TF + FH S+ ++ P +N E + W +K V TL + + + Y
Sbjct: 5 TFATAIAHFHTHSHGGAQARPLQNNTREVIHCPEAWLVKIVSTLFVYRVPDSDLCFC-YL 63
Query: 1220 RKNLCPPIAFYVIQHINNNFCKPRLAFEFFQFTRLNLNLIHSIATFNLLLRSLCQMGLLD 1041
KNL P I+F V++ ++NN P + F F++F+R LN+ HS T+NLL RSLC+ GL D
Sbjct: 64 SKNLNPFISFEVVKKLDNN---PHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHD 120
Query: 1040 LANLVVEYMNADGLSLDGPLLEFLVSSVAHAGKFSIGREILISQAQL---CLGKEEIINS 870
LA + E M +DG+S + LL FLVSS A GK +L+ ++ C+
Sbjct: 121 LAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCCM-------- 172
Query: 869 FVHNKFLSLLVKQNRVDEAFIFFRDHLLKLRSFCLDTCSFNIVIDGLCKAGQIDRAFEVF 690
V N L+ LVK +RV++A F +HL + +S C DT +FNI+I GLC G+ ++A E+
Sbjct: 173 -VVNSLLNTLVKLDRVEDAMKLFDEHL-RFQS-CNDTKTFNILIRGLCGVGKAEKALELL 229
Query: 689 NDMGSFGCFADITTYNSVINGLCKLGDADRALELLREIQSQGGLSPDVKTYTTIISGFFK 510
M FGC DI TYN++I G CK + ++A E+ ++++S SPDV TYT++ISG+ K
Sbjct: 230 GVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCK 289
Query: 509 LGRNHEALHLWDDMTHRGIRPNVYTFNVLIHGFGQSGDLGSALKIFESMSKFGCAPDVIT 330
G+ EA L DDM GI P TFNVL+ G+ ++G++ +A +I M FGC PDV+T
Sbjct: 290 AGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVT 349
Query: 329 FTNLLSGYCQIGEIDQGLKLWDEMNARKLYPNAYTFSIVINSLCKSNRLNEARDLLSQLR 150
FT+L+ GYC++G++ QG +LW+EMNAR ++PNA+T+SI+IN+LC NRL +AR+LL QL
Sbjct: 350 FTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLA 409
Query: 149 WRNDILPQAFIYNPVIDGFCKAGNLDGANAIVAEMEEKKCNPDKYTFTI 3
DI+PQ F+YNPVIDGFCKAG ++ AN IV EME+KKC PDK TFTI
Sbjct: 410 -SKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTI 457
>ref|XP_006297396.1| hypothetical protein CARUB_v10013421mg [Capsella rubella]
gi|565479514|ref|XP_006297397.1| hypothetical protein
CARUB_v10013421mg [Capsella rubella]
gi|482566105|gb|EOA30294.1| hypothetical protein
CARUB_v10013421mg [Capsella rubella]
gi|482566106|gb|EOA30295.1| hypothetical protein
CARUB_v10013421mg [Capsella rubella]
Length = 535
Score = 382 bits (982), Expect = e-103
Identities = 212/469 (45%), Positives = 292/469 (62%), Gaps = 10/469 (2%)
Frame = -3
Query: 1379 TFKSIARCFHGISN--IESSPPTHNKIESL-----WFIKFVCTLCIRNAENLAIFGSDYF 1221
TF + FH S+ ++ P NK E + W IK V TL + + + Y
Sbjct: 5 TFATAIAHFHTHSHGGAQARPLHSNKREVMHCPEAWLIKIVSTLFVYRVPDSDLCFC-YL 63
Query: 1220 RKNLCPPIAFYVIQHINNNFCKPRLAFEFFQFTRLNLNLIHSIATFNLLLRSLCQMGLLD 1041
KNL P IAF V++ ++NN P L F F++F+R LN+ HS T+N+L RSLC+ G+ D
Sbjct: 64 SKNLNPFIAFEVVKKLDNNH--PHLGFRFWEFSRFKLNIRHSFWTYNVLTRSLCKAGMHD 121
Query: 1040 LANLVVEYMNADGLSLDGPLLEFLVSSVAHAGKFSIGREILISQAQL---CLGKEEIINS 870
LA + E M +DG+S + LL FLVSS A GK +L+ ++ C+
Sbjct: 122 LAGQMFECMRSDGVSPNSRLLGFLVSSFAEKGKLQFATALLLQSYEVERCCM-------- 173
Query: 869 FVHNKFLSLLVKQNRVDEAFIFFRDHLLKLRSFCLDTCSFNIVIDGLCKAGQIDRAFEVF 690
V N L+ LVK +RVD+A F HL C DT +FNI+I GLC G+ ++A E+
Sbjct: 174 -VVNSLLNTLVKLDRVDDAMKLFDKHLRF--QCCNDTKTFNILIRGLCSVGKGEKALELL 230
Query: 689 NDMGSFGCFADITTYNSVINGLCKLGDADRALELLREIQSQGGLSPDVKTYTTIISGFFK 510
+M FGC DI TYN++I G CK + +A E+L +++S G SPDV TYT++ISG+ K
Sbjct: 231 GEMSGFGCSPDIVTYNTLIKGFCKSNELAKANEMLNDVKSSSGCSPDVVTYTSMISGYCK 290
Query: 509 LGRNHEALHLWDDMTHRGIRPNVYTFNVLIHGFGQSGDLGSALKIFESMSKFGCAPDVIT 330
G+ EA L DDM GI P TFNVL+ G+ ++G++ SA I M FGC PDV+T
Sbjct: 291 AGKMQEAYLLLDDMLGLGIYPTTITFNVLVDGYAKAGEMTSAEDIRGKMISFGCFPDVVT 350
Query: 329 FTNLLSGYCQIGEIDQGLKLWDEMNARKLYPNAYTFSIVINSLCKSNRLNEARDLLSQLR 150
FT+L+ GYC+ G+++QG +LW+EMNA+ + PN +T+SI+IN+LCK N L +AR+LL QL
Sbjct: 351 FTSLIDGYCRAGQVNQGFRLWEEMNAKGMLPNEFTYSILINALCKENSLLKARELLGQLA 410
Query: 149 WRNDILPQAFIYNPVIDGFCKAGNLDGANAIVAEMEEKKCNPDKYTFTI 3
DI+ + F+YNPVIDGFCKAG ++ AN IV EME+KKC PDK TFTI
Sbjct: 411 -SKDIITKPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTI 458
>ref|XP_006577946.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
isoform X1 [Glycine max] gi|571448762|ref|XP_006577947.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like isoform X2 [Glycine max]
gi|571448764|ref|XP_006577948.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g06000-like isoform X3 [Glycine max]
gi|571448766|ref|XP_006577949.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g06000-like isoform X4 [Glycine max]
Length = 510
Score = 375 bits (963), Expect = e-101
Identities = 191/431 (44%), Positives = 282/431 (65%)
Frame = -3
Query: 1295 WFIKFVCTLCIRNAENLAIFGSDYFRKNLCPPIAFYVIQHINNNFCKPRLAFEFFQFTRL 1116
WF+K CT+ +R+ G YF K+L P + + V+ ++ P L F+F +F R
Sbjct: 10 WFVKIACTVFVRSNSLDPFVG--YFSKHLTPSLVYEVVNRLHI----PNLGFKFVEFCRH 63
Query: 1115 NLNLIHSIATFNLLLRSLCQMGLLDLANLVVEYMNADGLSLDGPLLEFLVSSVAHAGKFS 936
L++ HS T++LLLRSLC+ L A +V ++M DG D LL FLV S A G+
Sbjct: 64 KLHMSHSYLTYSLLLRSLCRSNLHHTAKVVYDWMRCDGQIPDNRLLGFLVWSYAIVGRLD 123
Query: 935 IGREILISQAQLCLGKEEIINSFVHNKFLSLLVKQNRVDEAFIFFRDHLLKLRSFCLDTC 756
+ RE+L +G +N+ V+N ++L++QN+V +A + FR+ L++LR + T
Sbjct: 124 VSRELLADVQCNNVG----VNAVVYNDLFNVLIRQNKVVDAVVLFRE-LIRLR-YKPVTY 177
Query: 755 SFNIVIDGLCKAGQIDRAFEVFNDMGSFGCFADITTYNSVINGLCKLGDADRALELLREI 576
+ NI++ GLC+AG+ID AF + ND+ SFGC D+ TYN++I+GLC++ + DRA LL+E+
Sbjct: 178 TVNILMRGLCRAGEIDEAFRLLNDLRSFGCLPDVITYNTLIHGLCRINEVDRARSLLKEV 237
Query: 575 QSQGGLSPDVKTYTTIISGFFKLGRNHEALHLWDDMTHRGIRPNVYTFNVLIHGFGQSGD 396
G +PDV +YTTIISG+ K + E L+ +M G PN +TFN LI GFG+ GD
Sbjct: 238 CLNGEFAPDVVSYTTIISGYCKFSKMEEGNLLFGEMIRSGTAPNTFTFNALIGGFGKLGD 297
Query: 395 LGSALKIFESMSKFGCAPDVITFTNLLSGYCQIGEIDQGLKLWDEMNARKLYPNAYTFSI 216
+ SAL ++E M GC PDV TFT+L++GY ++G++ Q + +W +MN + + YTFS+
Sbjct: 298 MASALALYEKMLVQGCVPDVATFTSLINGYFRLGQVHQAMDMWHKMNDKNIGATLYTFSV 357
Query: 215 VINSLCKSNRLNEARDLLSQLRWRNDILPQAFIYNPVIDGFCKAGNLDGANAIVAEMEEK 36
+++ LC +NRL++ARD+L L +DI+PQ FIYNPVIDG+CK+GN+D AN IVAEME
Sbjct: 358 LVSGLCNNNRLHKARDILRLLN-ESDIVPQPFIYNPVIDGYCKSGNVDEANKIVAEMEVN 416
Query: 35 KCNPDKYTFTI 3
+C PDK TFTI
Sbjct: 417 RCKPDKLTFTI 427
Score = 61.2 bits (147), Expect = 1e-06
Identities = 51/249 (20%), Positives = 103/249 (41%), Gaps = 1/249 (0%)
Frame = -3
Query: 1118 LNLNLIHSIATFNLLLRSLCQMGLLDLANLVVEYMNADGLSLDGPLLEFLVSSVAHAGKF 939
LN + ++ ++ C+ ++ NL+ M G + + L+ G
Sbjct: 239 LNGEFAPDVVSYTTIISGYCKFSKMEEGNLLFGEMIRSGTAPNTFTFNALIGGFGKLGDM 298
Query: 938 SIGREILISQ-AQLCLGKEEIINSFVHNKFLSLLVKQNRVDEAFIFFRDHLLKLRSFCLD 762
+ + Q C+ S ++ F + +V +A + H + ++
Sbjct: 299 ASALALYEKMLVQGCVPDVATFTSLINGYF-----RLGQVHQAMDMW--HKMNDKNIGAT 351
Query: 761 TCSFNIVIDGLCKAGQIDRAFEVFNDMGSFGCFADITTYNSVINGLCKLGDADRALELLR 582
+F++++ GLC ++ +A ++ + YN VI+G CK G+ D A +++
Sbjct: 352 LYTFSVLVSGLCNNNRLHKARDILRLLNESDIVPQPFIYNPVIDGYCKSGNVDEANKIVA 411
Query: 581 EIQSQGGLSPDVKTYTTIISGFFKLGRNHEALHLWDDMTHRGIRPNVYTFNVLIHGFGQS 402
E++ PD T+T +I G GR EA+ ++ M G P+ T N L ++
Sbjct: 412 EMEVNR-CKPDKLTFTILIIGHCMKGRMPEAIGIFHKMLAVGCAPDEITVNNLRSCLLKA 470
Query: 401 GDLGSALKI 375
G G A ++
Sbjct: 471 GMPGEAARV 479
>ref|XP_006396122.1| hypothetical protein EUTSA_v10002477mg [Eutrema salsugineum]
gi|557096393|gb|ESQ36901.1| hypothetical protein
EUTSA_v10002477mg [Eutrema salsugineum]
Length = 535
Score = 370 bits (951), Expect = e-100
Identities = 193/431 (44%), Positives = 279/431 (64%)
Frame = -3
Query: 1295 WFIKFVCTLCIRNAENLAIFGSDYFRKNLCPPIAFYVIQHINNNFCKPRLAFEFFQFTRL 1116
W +K V TL + + + Y KNL P IAF V++ ++N P + F F++F+R
Sbjct: 40 WLVKIVSTLFVYQVPDSDLCFC-YLSKNLNPFIAFEVVKKLDN----PHIGFRFWEFSRF 94
Query: 1115 NLNLIHSIATFNLLLRSLCQMGLLDLANLVVEYMNADGLSLDGPLLEFLVSSVAHAGKFS 936
LN+ HS T+NLL RSLC+ GL DLA + E M +DG+S + LL FLVSS A GK
Sbjct: 95 KLNIRHSFWTYNLLTRSLCKAGLHDLAGKMFECMKSDGVSPNSRLLGFLVSSFAEKGKLH 154
Query: 935 IGREILISQAQLCLGKEEIINSFVHNKFLSLLVKQNRVDEAFIFFRDHLLKLRSFCLDTC 756
+L+ ++ G ++NS +H LV+ +RV++A F HL C DT
Sbjct: 155 FATALLLQSYEV-EGSSMVVNSLLHT-----LVRLDRVEDAMKLFDTHLRS--QSCNDTR 206
Query: 755 SFNIVIDGLCKAGQIDRAFEVFNDMGSFGCFADITTYNSVINGLCKLGDADRALELLREI 576
+FNI+I GLC G+ A ++ +M SFG DI TYN++I G CK + ++A E+ E+
Sbjct: 207 TFNILIQGLCGIGKAHEALKLLGEMSSFGSSPDIVTYNTLIKGFCKSNELNKANEIFNEV 266
Query: 575 QSQGGLSPDVKTYTTIISGFFKLGRNHEALHLWDDMTHRGIRPNVYTFNVLIHGFGQSGD 396
+S+ G DV TYT+++SG+ K G+ EA L D+M G+ P TFNVL++G+ ++G+
Sbjct: 267 KSRNGCFRDVVTYTSMMSGYCKAGKMREASLLLDEMVGLGMYPTNITFNVLVYGYVKAGE 326
Query: 395 LGSALKIFESMSKFGCAPDVITFTNLLSGYCQIGEIDQGLKLWDEMNARKLYPNAYTFSI 216
+ SA I M FGC PDV+TFT L+ GYC++G++++G LW+EM+A+ ++PNA+T+SI
Sbjct: 327 MSSAEAIRRKMDSFGCFPDVVTFTTLIDGYCRVGQVNKGFSLWEEMSAKGMFPNAFTYSI 386
Query: 215 VINSLCKSNRLNEARDLLSQLRWRNDILPQAFIYNPVIDGFCKAGNLDGANAIVAEMEEK 36
+IN+LCK NRL +AR+LL QL DI+P+ F+YNP+IDGFCKAG ++ AN IVAEME+
Sbjct: 387 LINALCKENRLLKARELLGQLACM-DIVPKPFLYNPIIDGFCKAGKVNEANVIVAEMEKF 445
Query: 35 KCNPDKYTFTI 3
+C PDK TFTI
Sbjct: 446 RCKPDKITFTI 456