BLASTX nr result

ID: Catharanthus23_contig00022667 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00022667
         (728 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006482965.1| PREDICTED: uncharacterized protein LOC102616...    70   9e-10
ref|XP_006438907.1| hypothetical protein CICLE_v10033410mg [Citr...    70   9e-10
ref|XP_004229293.1| PREDICTED: pentatricopeptide repeat-containi...    64   4e-08
ref|XP_006345375.1| PREDICTED: trinucleotide repeat-containing g...    62   1e-07
ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containi...    61   4e-07
gb|EOY17576.1| Uncharacterized protein TCM_042370 [Theobroma cacao]    60   7e-07
ref|XP_002332417.1| predicted protein [Populus trichocarpa] gi|5...    60   9e-07

>ref|XP_006482965.1| PREDICTED: uncharacterized protein LOC102616992 [Citrus sinensis]
          Length = 432

 Score = 69.7 bits (169), Expect = 9e-10
 Identities = 45/142 (31%), Positives = 65/142 (45%), Gaps = 7/142 (4%)
 Frame = +2

Query: 11  NKAWNGCPEESSCWRKEPTYHGRWSSDDNNNAGDKGWTHVDNRSRGWKQRNFS-CHEPQY 187
           NK W      S CW ++ ++          N GD  W             NFS C  P  
Sbjct: 300 NKGWGDSGNNSECWSQQKSW--------KQNTGDNPWNP-----------NFSKCTRPPT 340

Query: 188 PVDT-GNAWQRSFPSRTGGSRGWTEYGNNSEDRKQI-----NNHKGSFRGSCRKREGSWQ 349
            V+  GNAW R + +  G SRGW  + N +   K++       ++G++  SCRKREGS  
Sbjct: 341 DVELRGNAWNRGWRANGGDSRGWKPWVNQNNGPKRLEFERSGGNRGAWSRSCRKREGS-- 398

Query: 350 HSSRYKTSRFQGNDYMTTQKWQ 415
           H S YK+S +Q +   T + W+
Sbjct: 399 HLSGYKSSGYQQDYNQTEEFWR 420


>ref|XP_006438907.1| hypothetical protein CICLE_v10033410mg [Citrus clementina]
           gi|557541103|gb|ESR52147.1| hypothetical protein
           CICLE_v10033410mg [Citrus clementina]
          Length = 432

 Score = 69.7 bits (169), Expect = 9e-10
 Identities = 45/142 (31%), Positives = 65/142 (45%), Gaps = 7/142 (4%)
 Frame = +2

Query: 11  NKAWNGCPEESSCWRKEPTYHGRWSSDDNNNAGDKGWTHVDNRSRGWKQRNFS-CHEPQY 187
           NK W      S CW ++ ++          N GD  W             NFS C  P  
Sbjct: 300 NKGWGDSGNNSECWSQQKSW--------KQNTGDNPWNP-----------NFSKCTRPPT 340

Query: 188 PVDT-GNAWQRSFPSRTGGSRGWTEYGNNSEDRKQI-----NNHKGSFRGSCRKREGSWQ 349
            V+  GNAW R + +  G SRGW  + N +   K++       ++G++  SCRKREGS  
Sbjct: 341 DVELRGNAWNRGWRANGGDSRGWKPWVNQNNGPKRLEFERSGGNRGAWSRSCRKREGS-- 398

Query: 350 HSSRYKTSRFQGNDYMTTQKWQ 415
           H S YK+S +Q +   T + W+
Sbjct: 399 HLSGYKSSGYQQDYNQTEEFWR 420


>ref|XP_004229293.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20740-like [Solanum lycopersicum]
          Length = 1256

 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 53/164 (32%), Positives = 69/164 (42%), Gaps = 31/164 (18%)
 Frame = +2

Query: 17  AWNGCPEESSCWRKEPTYHGRWSSDDNNNA-----------GDKGWTHVDNRSRGWKQR- 160
           AW GC  ES  W     Y   ++  DN+ +           G KG   VDN    W Q  
Sbjct: 246 AWGGCGNESWGWNSGMNYQNGYACVDNSFSNLWYRSGACVSGAKGNEWVDNSVGSWGQTC 305

Query: 161 -NFSCHEPQYPVDTGNAWQRSFPSRTGGS-------RG-------WTEYGNNSEDRK--- 286
            N   HE Q   D G+ W R+F SR GG+       RG       + +    S DR    
Sbjct: 306 WNTGGHE-QRNSDYGSRWNRNF-SRGGGTTSKDRRRRGSEGTSWDYQQQPRQSNDRNVDF 363

Query: 287 -QINNHKGSFRGSCRKREGSWQHSSRYKTSRFQGNDYMTTQKWQ 415
            + +    +F    RKRE S QH  RYK+SRFQ ++  T   W+
Sbjct: 364 GRPSRGNSTFYSGSRKRESSSQHVPRYKSSRFQSDEQRTANNWR 407


>ref|XP_006345375.1| PREDICTED: trinucleotide repeat-containing gene 6B protein-like
           [Solanum tuberosum]
          Length = 619

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 55/178 (30%), Positives = 72/178 (40%), Gaps = 31/178 (17%)
 Frame = +2

Query: 5   LWNKAWNGCPEESSCWRKEPTYHGRWSSDDNNNA-----------GDKGWTHVDNRSRGW 151
           L + AW GC  ES  W     Y   ++  DN+ +           G KG   VDN    W
Sbjct: 440 LKDTAWGGCGNESWGWNTGMNYENGYACVDNSFSNLWHQSGACVSGAKGNEWVDNSVGSW 499

Query: 152 KQR--NFSCHEPQYPVDTGNAWQRSFPSRTGGS----RGWT-------EYGNNSEDRKQI 292
            Q   N   HE Q   D G+ W R+  SR GG+    R W        +Y        + 
Sbjct: 500 GQTYWNTGGHE-QRNSDYGSRWNRNL-SRGGGTTSKDRRWRGSEVTSWDYQQQPRQSNER 557

Query: 293 NNHKG-------SFRGSCRKREGSWQHSSRYKTSRFQGNDYMTTQKWQ*VEYQNMIDF 445
           N   G       +F    RKRE S QH  RYK+SRFQ ++  T   W+  + Q  + F
Sbjct: 558 NVDFGRPSRGDKTFYTGSRKRESSSQHVPRYKSSRFQSDEQRTATNWREEKTQKRVTF 615


>ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20740-like [Vitis vinifera]
          Length = 1294

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 45/149 (30%), Positives = 66/149 (44%), Gaps = 18/149 (12%)
 Frame = +2

Query: 8   WNKAWN-----------GCPEESSCWRKEPTYHGRWSSDDNNNAGDKGWTHVDNRSRGWK 154
           W++ WN             P E  C   E     +     NN  G   W   DN    +K
Sbjct: 287 WSQGWNYQNKSRNLDTVDDPWERGCQGTESMGFKQGGDLGNNPWGGNHW---DNSI--YK 341

Query: 155 QRN-FSCHEP-QYPVDTGNAWQRSFPSRTGGSRGWTEYGNNSEDRKQINNHK-----GSF 313
           Q+N F  H P +Y    G    +        S+GW ++ N++ + K++ + K     G +
Sbjct: 342 QKNVFDSHSPWKYCAFQGTEAAKDRSDSGDKSQGWKQWENHNNEPKKLESRKVSGGWGVW 401

Query: 314 RGSCRKREGSWQHSSRYKTSRFQGNDYMT 400
            G CRKREGS +++S YK SR QG+ Y T
Sbjct: 402 NGGCRKREGSHKNTSSYKCSRVQGDSYQT 430


>gb|EOY17576.1| Uncharacterized protein TCM_042370 [Theobroma cacao]
          Length = 461

 Score = 60.1 bits (144), Expect = 7e-07
 Identities = 43/143 (30%), Positives = 59/143 (41%), Gaps = 28/143 (19%)
 Frame = +2

Query: 71  HGRWSSDDNN--NAGDKGWTHV-----DNRSRGWK--QRNFSCHEPQYP--VDTGNAWQR 217
           H  W    +   N G+  W H        +  GW   +RN      QY    +  N+W R
Sbjct: 306 HNSWGDYGSRDWNTGNNSWGHSCQGIGSGKDDGWGDFKRNSCRRNQQYKRLPNGDNSWDR 365

Query: 218 SFPSRTGGSR--GWTEYGNNSEDRKQINNHK---------------GSFRGSCRKREGSW 346
           SF    G ++  GW +YG NS   KQ  N                 G++ G  RKRE S 
Sbjct: 366 SFVQHNGAAKDQGWGDYGRNSWGWKQWENKNIGSRKVDFRKTSSSGGAWHGGSRKRESSH 425

Query: 347 QHSSRYKTSRFQGNDYMTTQKWQ 415
           Q+ S Y + RFQ +D  T+  W+
Sbjct: 426 QYISGYNSHRFQRDDNQTSHCWR 448


>ref|XP_002332417.1| predicted protein [Populus trichocarpa]
           gi|566147421|ref|XP_006368584.1| hypothetical protein
           POPTR_0001s05850g [Populus trichocarpa]
           gi|550346600|gb|ERP65153.1| hypothetical protein
           POPTR_0001s05850g [Populus trichocarpa]
          Length = 394

 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 45/171 (26%), Positives = 72/171 (42%), Gaps = 25/171 (14%)
 Frame = +2

Query: 14  KAWNGCPEESSCWRKEPTYHGRWSSDDNNN-------------AGDKGWTHVDNRSRGWK 154
           K W  C  +S  W      H   S+D NNN             A DKGW ++ + SRG+ 
Sbjct: 224 KTWGVCGNKSWGWNHSGN-HVDQSNDWNNNSNPWQHSRQGVDPANDKGWGNLRDSSRGYN 282

Query: 155 QR-----NFSCHEPQ--YPVDTGNAWQRSFPSRTGGSRGWTEYGNNSEDRKQINNHKGSF 313
           Q      N  C      +   +G +  R +      S+GW ++ N  ++ K ++  K   
Sbjct: 283 QHESRKWNNDCKSSGNGFFQGSGASKDRKWEDNGSNSQGWKQWDNYGKNTKGLDFRKHGG 342

Query: 314 RGSCR-----KREGSWQHSSRYKTSRFQGNDYMTTQKWQ*VEYQNMIDF*F 451
               R     +REG+ QH + Y+++RFQG+ + T   W     +  + F F
Sbjct: 343 GWETRNEGSWQREGAHQHITGYESTRFQGDGFQTGHSWSGGRTKRRVSFAF 393


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