BLASTX nr result

ID: Catharanthus23_contig00022584 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00022584
         (345 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004232132.1| PREDICTED: U3 small nucleolar ribonucleoprot...    82   7e-14
gb|EOX95044.1| Alpha-L RNA-binding motif/Ribosomal protein S4 fa...    82   1e-13
ref|XP_006338328.1| PREDICTED: U3 small nucleolar ribonucleoprot...    81   1e-13
gb|ESW15444.1| hypothetical protein PHAVU_007G072900g [Phaseolus...    79   5e-13
gb|AFK45487.1| unknown [Lotus japonicus]                               79   5e-13
gb|AFK40090.1| unknown [Lotus japonicus]                               79   5e-13
ref|XP_003536456.1| PREDICTED: U3 small nucleolar ribonucleoprot...    79   6e-13
ref|XP_002281732.1| PREDICTED: U3 small nucleolar ribonucleoprot...    79   6e-13
emb|CAN75801.1| hypothetical protein VITISV_016975 [Vitis vinifera]    79   6e-13
ref|XP_004503484.1| PREDICTED: U3 small nucleolar ribonucleoprot...    79   8e-13
gb|EMJ16251.1| hypothetical protein PRUPE_ppa012139mg [Prunus pe...    79   8e-13
ref|XP_003630716.1| U3 small nucleolar ribonucleoprotein IMP3 [M...    79   8e-13
ref|XP_003630714.1| U3 small nucleolar ribonucleoprotein IMP3 [M...    79   8e-13
ref|XP_006430963.1| hypothetical protein CICLE_v10012892mg [Citr...    76   4e-12
ref|XP_006482441.1| PREDICTED: U3 small nucleolar ribonucleoprot...    75   9e-12
gb|ABD96845.1| hypothetical protein [Cleome spinosa]                   74   2e-11
ref|XP_004304195.1| PREDICTED: U3 small nucleolar ribonucleoprot...    72   6e-11
ref|XP_004153543.1| PREDICTED: U3 small nucleolar ribonucleoprot...    72   1e-10
gb|EXB77643.1| U3 small nucleolar ribonucleoprotein [Morus notab...    71   2e-10
ref|XP_002525943.1| U3 small nucleolar ribonucleoprotein protein...    71   2e-10

>ref|XP_004232132.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP3-like
           [Solanum lycopersicum]
          Length = 182

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 38/41 (92%), Positives = 38/41 (92%)
 Frame = +1

Query: 223 EGGHRENDVMRRYHVTGRDDYKKYSKLCRMVQKLVNILKQM 345
           EGGHRE DVMRRYHVTGRDDYKKYS LCR VQKLVNILKQM
Sbjct: 23  EGGHREGDVMRRYHVTGRDDYKKYSGLCRTVQKLVNILKQM 63


>gb|EOX95044.1| Alpha-L RNA-binding motif/Ribosomal protein S4 family protein
           [Theobroma cacao]
          Length = 182

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 38/41 (92%), Positives = 38/41 (92%)
 Frame = +1

Query: 223 EGGHRENDVMRRYHVTGRDDYKKYSKLCRMVQKLVNILKQM 345
           EGGHREN VM RYHVTGRDDYKKYS LCRMVQKLVNILKQM
Sbjct: 23  EGGHRENLVMHRYHVTGRDDYKKYSSLCRMVQKLVNILKQM 63


>ref|XP_006338328.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP3-like
           [Solanum tuberosum]
          Length = 182

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 38/41 (92%), Positives = 38/41 (92%)
 Frame = +1

Query: 223 EGGHRENDVMRRYHVTGRDDYKKYSKLCRMVQKLVNILKQM 345
           EGGHRE DVMRRYHVTGRDDYKKYS LCR VQKLVNILKQM
Sbjct: 23  EGGHREADVMRRYHVTGRDDYKKYSGLCRTVQKLVNILKQM 63


>gb|ESW15444.1| hypothetical protein PHAVU_007G072900g [Phaseolus vulgaris]
          Length = 182

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 37/41 (90%), Positives = 38/41 (92%)
 Frame = +1

Query: 223 EGGHRENDVMRRYHVTGRDDYKKYSKLCRMVQKLVNILKQM 345
           EGGHREN VM+RYHVTGRDDYKKYS LC MVQKLVNILKQM
Sbjct: 23  EGGHRENLVMQRYHVTGRDDYKKYSGLCHMVQKLVNILKQM 63


>gb|AFK45487.1| unknown [Lotus japonicus]
          Length = 182

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 37/41 (90%), Positives = 38/41 (92%)
 Frame = +1

Query: 223 EGGHRENDVMRRYHVTGRDDYKKYSKLCRMVQKLVNILKQM 345
           EGGHREN VM+RYHVTGRDDYKKYS LC MVQKLVNILKQM
Sbjct: 23  EGGHRENLVMQRYHVTGRDDYKKYSSLCGMVQKLVNILKQM 63


>gb|AFK40090.1| unknown [Lotus japonicus]
          Length = 182

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 37/41 (90%), Positives = 38/41 (92%)
 Frame = +1

Query: 223 EGGHRENDVMRRYHVTGRDDYKKYSKLCRMVQKLVNILKQM 345
           EGGHREN VM+RYHVTGRDDYKKYS LC MVQKLVNILKQM
Sbjct: 23  EGGHRENLVMQRYHVTGRDDYKKYSSLCGMVQKLVNILKQM 63


>ref|XP_003536456.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP3-like
           [Glycine max] gi|356575988|ref|XP_003556117.1|
           PREDICTED: U3 small nucleolar ribonucleoprotein protein
           IMP3-like [Glycine max] gi|255637789|gb|ACU19216.1|
           unknown [Glycine max]
          Length = 182

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 36/41 (87%), Positives = 38/41 (92%)
 Frame = +1

Query: 223 EGGHRENDVMRRYHVTGRDDYKKYSKLCRMVQKLVNILKQM 345
           EGGHREN +M+RYHVTGRDDYKKYS LC MVQKLVNILKQM
Sbjct: 23  EGGHRENLIMQRYHVTGRDDYKKYSGLCHMVQKLVNILKQM 63


>ref|XP_002281732.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP3 [Vitis
           vinifera] gi|298204446|emb|CBI16926.3| unnamed protein
           product [Vitis vinifera]
          Length = 182

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 37/41 (90%), Positives = 37/41 (90%)
 Frame = +1

Query: 223 EGGHRENDVMRRYHVTGRDDYKKYSKLCRMVQKLVNILKQM 345
           EGGHRE  VM RYHVTGRDDYKKYS LCRMVQKLVNILKQM
Sbjct: 23  EGGHREAHVMHRYHVTGRDDYKKYSGLCRMVQKLVNILKQM 63


>emb|CAN75801.1| hypothetical protein VITISV_016975 [Vitis vinifera]
          Length = 164

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 37/41 (90%), Positives = 37/41 (90%)
 Frame = +1

Query: 223 EGGHRENDVMRRYHVTGRDDYKKYSKLCRMVQKLVNILKQM 345
           EGGHRE  VM RYHVTGRDDYKKYS LCRMVQKLVNILKQM
Sbjct: 23  EGGHREAHVMHRYHVTGRDDYKKYSGLCRMVQKLVNILKQM 63


>ref|XP_004503484.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP3-like
           [Cicer arietinum]
          Length = 182

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 35/41 (85%), Positives = 38/41 (92%)
 Frame = +1

Query: 223 EGGHRENDVMRRYHVTGRDDYKKYSKLCRMVQKLVNILKQM 345
           EGGHREN VM+RYHVTGRDDYKKYS +CRMVQKLVN +KQM
Sbjct: 23  EGGHRENMVMQRYHVTGRDDYKKYSSICRMVQKLVNTVKQM 63


>gb|EMJ16251.1| hypothetical protein PRUPE_ppa012139mg [Prunus persica]
          Length = 182

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 36/41 (87%), Positives = 38/41 (92%)
 Frame = +1

Query: 223 EGGHRENDVMRRYHVTGRDDYKKYSKLCRMVQKLVNILKQM 345
           EGGHRE  V++RYHVTGRDDYKKYS LCRMVQKLVNILKQM
Sbjct: 23  EGGHREAQVLQRYHVTGRDDYKKYSGLCRMVQKLVNILKQM 63


>ref|XP_003630716.1| U3 small nucleolar ribonucleoprotein IMP3 [Medicago truncatula]
           gi|355524738|gb|AET05192.1| U3 small nucleolar
           ribonucleoprotein IMP3 [Medicago truncatula]
          Length = 173

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 35/41 (85%), Positives = 38/41 (92%)
 Frame = +1

Query: 223 EGGHRENDVMRRYHVTGRDDYKKYSKLCRMVQKLVNILKQM 345
           EGGHREN VM+RYHVTGRDDYKKYS +CRMVQKLVN +KQM
Sbjct: 23  EGGHRENMVMQRYHVTGRDDYKKYSSICRMVQKLVNTVKQM 63


>ref|XP_003630714.1| U3 small nucleolar ribonucleoprotein IMP3 [Medicago truncatula]
           gi|217075252|gb|ACJ85986.1| unknown [Medicago
           truncatula] gi|355524736|gb|AET05190.1| U3 small
           nucleolar ribonucleoprotein IMP3 [Medicago truncatula]
           gi|388502894|gb|AFK39513.1| unknown [Medicago
           truncatula]
          Length = 182

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 35/41 (85%), Positives = 38/41 (92%)
 Frame = +1

Query: 223 EGGHRENDVMRRYHVTGRDDYKKYSKLCRMVQKLVNILKQM 345
           EGGHREN VM+RYHVTGRDDYKKYS +CRMVQKLVN +KQM
Sbjct: 23  EGGHRENMVMQRYHVTGRDDYKKYSSICRMVQKLVNTVKQM 63


>ref|XP_006430963.1| hypothetical protein CICLE_v10012892mg [Citrus clementina]
           gi|557533020|gb|ESR44203.1| hypothetical protein
           CICLE_v10012892mg [Citrus clementina]
          Length = 182

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 35/41 (85%), Positives = 37/41 (90%)
 Frame = +1

Query: 223 EGGHRENDVMRRYHVTGRDDYKKYSKLCRMVQKLVNILKQM 345
           EGGHRE  +M+RYHVTGRDDYKKYS LC MVQKLVNILKQM
Sbjct: 23  EGGHREAMIMQRYHVTGRDDYKKYSSLCGMVQKLVNILKQM 63


>ref|XP_006482441.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP3-like
           [Citrus sinensis]
          Length = 182

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 34/41 (82%), Positives = 37/41 (90%)
 Frame = +1

Query: 223 EGGHRENDVMRRYHVTGRDDYKKYSKLCRMVQKLVNILKQM 345
           EGGHRE  +++RYHVTGRDDYKKYS LC MVQKLVNILKQM
Sbjct: 23  EGGHREAMILQRYHVTGRDDYKKYSSLCGMVQKLVNILKQM 63


>gb|ABD96845.1| hypothetical protein [Cleome spinosa]
          Length = 182

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 34/41 (82%), Positives = 35/41 (85%)
 Frame = +1

Query: 223 EGGHRENDVMRRYHVTGRDDYKKYSKLCRMVQKLVNILKQM 345
           E GHREN VM+RYHV GRDDYKKYS LCR VQKL NILKQM
Sbjct: 23  ERGHRENQVMQRYHVVGRDDYKKYSGLCRTVQKLTNILKQM 63


>ref|XP_004304195.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP3-like
           [Fragaria vesca subsp. vesca]
          Length = 182

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 32/41 (78%), Positives = 36/41 (87%)
 Frame = +1

Query: 223 EGGHRENDVMRRYHVTGRDDYKKYSKLCRMVQKLVNILKQM 345
           EGGHRE  VM+RYHVTGRDDYKKYS +CR  QK+VN+LKQM
Sbjct: 23  EGGHREAMVMQRYHVTGRDDYKKYSSVCRTTQKMVNMLKQM 63


>ref|XP_004153543.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP3-like
           [Cucumis sativus] gi|449476409|ref|XP_004154729.1|
           PREDICTED: U3 small nucleolar ribonucleoprotein protein
           IMP3-like [Cucumis sativus]
          Length = 183

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 32/41 (78%), Positives = 35/41 (85%)
 Frame = +1

Query: 223 EGGHRENDVMRRYHVTGRDDYKKYSKLCRMVQKLVNILKQM 345
           EGGHRE  VM RYH+TGRDDYKKYS LCR VQKLV +LK+M
Sbjct: 23  EGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKM 63


>gb|EXB77643.1| U3 small nucleolar ribonucleoprotein [Morus notabilis]
          Length = 223

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 32/41 (78%), Positives = 36/41 (87%)
 Frame = +1

Query: 223 EGGHRENDVMRRYHVTGRDDYKKYSKLCRMVQKLVNILKQM 345
           +GGHRE  VM+RYHVTGRDDYKKYS LCRMV +LVNIL +M
Sbjct: 64  DGGHREARVMQRYHVTGRDDYKKYSGLCRMVHRLVNILMKM 104


>ref|XP_002525943.1| U3 small nucleolar ribonucleoprotein protein IMP3, putative
           [Ricinus communis] gi|223534772|gb|EEF36463.1| U3 small
           nucleolar ribonucleoprotein protein IMP3, putative
           [Ricinus communis]
          Length = 182

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 32/41 (78%), Positives = 35/41 (85%)
 Frame = +1

Query: 223 EGGHRENDVMRRYHVTGRDDYKKYSKLCRMVQKLVNILKQM 345
           EG HRE  VM+RYH+  RDDYKKYS +CRMVQKLVNILKQM
Sbjct: 23  EGDHREAKVMQRYHIVDRDDYKKYSGICRMVQKLVNILKQM 63


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