BLASTX nr result

ID: Catharanthus23_contig00022197 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00022197
         (213 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265743.1| PREDICTED: probable U3 small nucleolar RNA-a...    56   4e-06
emb|CAN82884.1| hypothetical protein VITISV_023155 [Vitis vinifera]    56   4e-06
ref|XP_006351260.1| PREDICTED: probable U3 small nucleolar RNA-a...    55   7e-06
ref|XP_004249236.1| PREDICTED: probable U3 small nucleolar RNA-a...    55   7e-06
ref|XP_002517659.1| U3 small nucleolar RNA-associated protein, p...    55   1e-05

>ref|XP_002265743.1| PREDICTED: probable U3 small nucleolar RNA-associated protein 11
           [Vitis vinifera] gi|239056174|emb|CAQ58608.1| unknown
           gene [Vitis vinifera] gi|239056194|emb|CAQ58632.1|
           unknown protein / putative CGI-94 protein [Vitis
           vinifera] gi|296085811|emb|CBI31135.3| unnamed protein
           product [Vitis vinifera]
          Length = 229

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = +2

Query: 134 QKLKEKAAFRNPDEFYFKMVKTRTVD 211
           QKLKEKAAFRNPDEFYFKM+KTRTVD
Sbjct: 49  QKLKEKAAFRNPDEFYFKMIKTRTVD 74


>emb|CAN82884.1| hypothetical protein VITISV_023155 [Vitis vinifera]
          Length = 229

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = +2

Query: 134 QKLKEKAAFRNPDEFYFKMVKTRTVD 211
           QKLKEKAAFRNPDEFYFKM+KTRTVD
Sbjct: 49  QKLKEKAAFRNPDEFYFKMIKTRTVD 74


>ref|XP_006351260.1| PREDICTED: probable U3 small nucleolar RNA-associated protein
           11-like [Solanum tuberosum]
          Length = 229

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = +2

Query: 134 QKLKEKAAFRNPDEFYFKMVKTRTVD 211
           QKLKEKAAFRNPDEFYFKMVKT+TVD
Sbjct: 49  QKLKEKAAFRNPDEFYFKMVKTKTVD 74


>ref|XP_004249236.1| PREDICTED: probable U3 small nucleolar RNA-associated protein
           11-like [Solanum lycopersicum]
          Length = 229

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = +2

Query: 134 QKLKEKAAFRNPDEFYFKMVKTRTVD 211
           QKLKEKAAFRNPDEFYFKMVKT+TVD
Sbjct: 49  QKLKEKAAFRNPDEFYFKMVKTKTVD 74


>ref|XP_002517659.1| U3 small nucleolar RNA-associated protein, putative [Ricinus
           communis] gi|223543291|gb|EEF44823.1| U3 small nucleolar
           RNA-associated protein, putative [Ricinus communis]
          Length = 231

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = +2

Query: 134 QKLKEKAAFRNPDEFYFKMVKTRTVD 211
           Q+LKEKAAFRNPDEFYFKM+KTRTVD
Sbjct: 49  QRLKEKAAFRNPDEFYFKMIKTRTVD 74


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