BLASTX nr result

ID: Catharanthus23_contig00022011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00022011
         (401 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006579213.1| PREDICTED: uncharacterized protein LOC102670...    71   1e-10
ref|XP_006590026.1| PREDICTED: uncharacterized protein LOC102660...    68   1e-09
ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein A...    62   1e-07
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...    59   7e-07

>ref|XP_006579213.1| PREDICTED: uncharacterized protein LOC102670237 [Glycine max]
          Length = 383

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 39/124 (31%), Positives = 63/124 (50%)
 Frame = +2

Query: 8   LGLRDTKR*NEAIFARTLWNIHLKKDTLWCQWVHHYYIKTGSIWTVLPKRDFPPLFKPLL 187
           LGL + K  N A+ +  LW++H KKD+LW + VHHYY K G++W  +            +
Sbjct: 185 LGLFNLKDWNIALLSCILWDLHSKKDSLWVRLVHHYYFKGGNVWDFISSSS----DSVFI 240

Query: 188 TIRDKLVESHGSADAAIYRISSWNVGGGFNTSRAHDALRLQGQRQPWTRIV*NPTIPPKC 367
            IRD ++    + + A   ++SW         + +D +R       W+ I+ NP IP K 
Sbjct: 241 HIRDIIISKEENIEVAKLMLNSWGCNEQTLAGKMYDYIRGTRPVVHWSSIIWNPVIPSK- 299

Query: 368 LSFL 379
           +SF+
Sbjct: 300 MSFI 303


>ref|XP_006590026.1| PREDICTED: uncharacterized protein LOC102660482 [Glycine max]
          Length = 303

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 33/99 (33%), Positives = 50/99 (50%)
 Frame = +2

Query: 8   LGLRDTKR*NEAIFARTLWNIHLKKDTLWCQWVHHYYIKTGSIWTVLPKRDFPPLFKPLL 187
           LGL + K  N A+ +  LW+ H KKD+LW   VHHYY +   +W       +  L K ++
Sbjct: 197 LGLFNLKDWNLALLSCILWDFHCKKDSLW---VHHYYFRRSDVWNYNTSSSYSVLIKKII 253

Query: 188 TIRDKLVESHGSADAAIYRISSWNVGGGFNTSRAHDALR 304
            IRD ++    S + A  RI SW   G     + ++ +R
Sbjct: 254 QIRDFIISKELSTEEAKKRIQSWRTNGQLLVGKVYEYIR 292


>ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 316

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 30/84 (35%), Positives = 43/84 (51%)
 Frame = +2

Query: 8   LGLRDTKR*NEAIFARTLWNIHLKKDTLWCQWVHHYYIKTGSIWTVLPKRDFPPLFKPLL 187
           LGL + K  N A+ +  LW+ H KKD+L  +WVHHYY +    W          L K ++
Sbjct: 230 LGLFNLKDWNLALLSHILWDFHCKKDSLRVRWVHHYYFRRSDEWNYNISSSNSVLIKKII 289

Query: 188 TIRDKLVESHGSADAAIYRISSWN 259
            IRD ++    S +    RI SW+
Sbjct: 290 QIRDFIISKELSMEETKKRIQSWS 313


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
 Frame = +2

Query: 35   NEAIFARTLWNIHLKKDTLWCQWVHHYYIKTGSIWTVLPKRDFPPLFKPLLTIRDKLVES 214
            N A   + LW I  K+D LW +W+H YYIK   I TV        + + ++  RD L   
Sbjct: 868  NRAAMLKLLWAIEFKRDKLWVRWIHSYYIKRQDILTVNISNQTTWILRKIVKARDHL--- 924

Query: 215  HGSADAAIYRISSWN---VGGGFNTSRAHDALRLQGQRQPWTRIV*NPTIPPK 364
                      I  W+   +G  F+  +A+  +   G+R  W R++ N    PK
Sbjct: 925  --------SNIGDWDEICIGDKFSMKKAYKKISENGERVRWRRLICNNYATPK 969


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