BLASTX nr result
ID: Catharanthus23_contig00021322
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00021322
(1098 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOX91504.1| RNA-binding family protein isoform 1 [Theobroma c... 166 6e-78
dbj|BAJ53198.1| JHL03K20.7 [Jatropha curcas] 171 2e-76
ref|XP_002534389.1| RNA binding protein, putative [Ricinus commu... 172 3e-76
ref|XP_003611682.1| RNA-binding protein with multiple splicing [... 176 4e-76
ref|XP_002310126.1| hypothetical protein POPTR_0007s10740g [Popu... 159 4e-75
ref|XP_006411485.1| hypothetical protein EUTSA_v10017030mg [Eutr... 162 4e-75
ref|XP_006293501.1| hypothetical protein CARUB_v10023763mg [Caps... 155 7e-73
ref|NP_850366.2| RNA recognition motif-containing protein [Arabi... 154 2e-71
gb|AAO37215.1| hypothetical protein [Arabidopsis thaliana] 154 2e-71
ref|NP_001118504.1| RNA recognition motif-containing protein [Ar... 154 2e-68
ref|XP_002879975.1| hypothetical protein ARALYDRAFT_903572 [Arab... 151 8e-68
ref|NP_001078040.1| RNA recognition motif-containing protein [Ar... 154 4e-67
gb|AAO37217.1| hypothetical protein [Arabidopsis thaliana] gi|61... 154 4e-67
ref|XP_004966276.1| PREDICTED: cell wall integrity protein scw1-... 138 3e-62
gb|EMJ08043.1| hypothetical protein PRUPE_ppa027064mg [Prunus pe... 195 3e-47
emb|CBI21383.3| unnamed protein product [Vitis vinifera] 191 3e-46
ref|XP_002283118.1| PREDICTED: uncharacterized protein LOC100247... 191 3e-46
ref|XP_004288011.1| PREDICTED: U1 small nuclear ribonucleoprotei... 190 1e-45
emb|CAN64038.1| hypothetical protein VITISV_021557 [Vitis vinifera] 190 1e-45
gb|ABR17821.1| unknown [Picea sitchensis] 105 3e-43
>gb|EOX91504.1| RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 327
Score = 166 bits (420), Expect(2) = 6e-78
Identities = 94/142 (66%), Positives = 104/142 (73%), Gaps = 7/142 (4%)
Frame = -1
Query: 981 PLHQQYLPSQ---PQLVTYAPP-VHPRSSQDDVRTLFIAGLPEDIKAREIYNLFREFPGY 814
P Y+P Q P Y+ P V SS D VRTLFIAGLPEDIK REIYNLFREFPGY
Sbjct: 49 PHPHSYIPQQQPPPLFPCYSVPYVSACSSHDSVRTLFIAGLPEDIKPREIYNLFREFPGY 108
Query: 813 ESSHLRTTAS---TQPFAFAVFMDQQSALMALHTLNGMVFDLEKGSTLYIDLAKSNPRSK 643
ESSHLR S +QPFAFAVF DQQSA+ A+ LNGMVFDLEKGSTL+ID AKSN RSK
Sbjct: 109 ESSHLRNPNSAQNSQPFAFAVFSDQQSAIAAMQALNGMVFDLEKGSTLFIDFAKSNSRSK 168
Query: 642 RLRTDDDRQGSEKRMKSTSFSR 577
R RTDD+ GS+K+ + SFSR
Sbjct: 169 RPRTDDEWTGSDKKSRG-SFSR 189
Score = 153 bits (386), Expect(2) = 6e-78
Identities = 73/110 (66%), Positives = 95/110 (86%), Gaps = 5/110 (4%)
Frame = -3
Query: 553 SEATGRSDSSTKLNAMA-----CPTLFVASLGPTCSEQELIQVFSRCRGFLKLKMQSTYG 389
++++G +D++++ AM CPTLFVA+LG +C+E+ELIQVFSRC GFLKLKMQSTYG
Sbjct: 217 AQSSGNADANSESTAMKSSASPCPTLFVANLGASCTEEELIQVFSRCPGFLKLKMQSTYG 276
Query: 388 SPVAFVDFQDTACSTEALTNLQGTVLFSSTSGEGMRLEYAKSRMGLRSKK 239
+PVAFVDFQDTACST A+ +LQGT+L+SS +G+GMRLEYAKSRMG+R K+
Sbjct: 277 APVAFVDFQDTACSTGAMNSLQGTILYSSPAGDGMRLEYAKSRMGMRRKR 326
>dbj|BAJ53198.1| JHL03K20.7 [Jatropha curcas]
Length = 316
Score = 171 bits (432), Expect(2) = 2e-76
Identities = 87/143 (60%), Positives = 106/143 (74%), Gaps = 4/143 (2%)
Frame = -1
Query: 990 VAQPLHQQYLPSQ---PQLVTYAPPVHPRSSQDDVRTLFIAGLPEDIKAREIYNLFREFP 820
V P Y+P P +Y P P + D VRTLF+AGLP+D+K REIYNLFREFP
Sbjct: 41 VLPPPPPPYIPQAQPPPPFTSYPPSYAPHAPHDPVRTLFVAGLPDDVKPREIYNLFREFP 100
Query: 819 GYESSHLRT-TASTQPFAFAVFMDQQSALMALHTLNGMVFDLEKGSTLYIDLAKSNPRSK 643
GYESSHLR+ T ++QPFAFA F+DQ SA+ A+H LNGMVFDLEKGSTLYIDLAKSN RSK
Sbjct: 101 GYESSHLRSPTQTSQPFAFATFIDQPSAVAAMHALNGMVFDLEKGSTLYIDLAKSNSRSK 160
Query: 642 RLRTDDDRQGSEKRMKSTSFSRG 574
R R+DD+ G +KR+K++ + G
Sbjct: 161 RSRSDDEWSGLDKRVKASPATPG 183
Score = 143 bits (360), Expect(2) = 2e-76
Identities = 73/105 (69%), Positives = 86/105 (81%), Gaps = 2/105 (1%)
Frame = -3
Query: 580 KGHGI--CRRNSEATGRSDSSTKLNAMACPTLFVASLGPTCSEQELIQVFSRCRGFLKLK 407
+ HGI R SE TG + S++ +A CPTLFVA+LGP C EQELIQVFSRC GFLKLK
Sbjct: 212 QSHGIFDSRAASEPTGANSSNS--SAPPCPTLFVANLGPNCMEQELIQVFSRCPGFLKLK 269
Query: 406 MQSTYGSPVAFVDFQDTACSTEALTNLQGTVLFSSTSGEGMRLEY 272
MQSTYG+PVAFVDFQDT+CST AL +LQGT+L+SS +G+GMRLEY
Sbjct: 270 MQSTYGAPVAFVDFQDTSCSTGALNHLQGTILYSSPAGDGMRLEY 314
>ref|XP_002534389.1| RNA binding protein, putative [Ricinus communis]
gi|223525395|gb|EEF27997.1| RNA binding protein,
putative [Ricinus communis]
Length = 318
Score = 172 bits (436), Expect(2) = 3e-76
Identities = 92/144 (63%), Positives = 106/144 (73%), Gaps = 9/144 (6%)
Frame = -1
Query: 966 YLPSQP--QLVTYAPPVHPRSSQDDVRTLFIAGLPEDIKAREIYNLFREFPGYESSHLRT 793
Y+P QP TYAPP P + D VRTLF+AGLPED+ REIYNLFREFPGYESSHLRT
Sbjct: 49 YVPQQPLPPFATYAPPYVPYAGHDLVRTLFVAGLPEDVMPREIYNLFREFPGYESSHLRT 108
Query: 792 -TASTQPFAFAVFMDQQSALMALHTLNGMVFDLEKGSTLYIDLAKSNPRSKRLRTDDDRQ 616
T ++QPFAFA F DQ SA+ A+H LNGMVFDLEKGSTLYIDLAKSN RSKR RT D+
Sbjct: 109 PTQTSQPFAFATFADQPSAVAAMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRTADEWP 168
Query: 615 GSEKRMKS------TSFSRGMESV 562
G +K+ K+ ++F G SV
Sbjct: 169 GLDKKAKASPAIPQSNFDSGFGSV 192
Score = 141 bits (355), Expect(2) = 3e-76
Identities = 70/103 (67%), Positives = 82/103 (79%)
Frame = -3
Query: 580 KGHGICRRNSEATGRSDSSTKLNAMACPTLFVASLGPTCSEQELIQVFSRCRGFLKLKMQ 401
+ HG ++ +S +S +A CPTLFVA+LGP C+EQEL Q+FSR GFLKLKMQ
Sbjct: 211 QSHGTFDSRAKTETKSINSNNSSAPPCPTLFVANLGPNCTEQELTQLFSRFAGFLKLKMQ 270
Query: 400 STYGSPVAFVDFQDTACSTEALTNLQGTVLFSSTSGEGMRLEY 272
STYG+PVAFVDFQDTACST AL +LQGTVL+SSTSGEGMRLEY
Sbjct: 271 STYGAPVAFVDFQDTACSTGALNHLQGTVLYSSTSGEGMRLEY 313
>ref|XP_003611682.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355513017|gb|AES94640.1| RNA-binding protein with
multiple splicing [Medicago truncatula]
Length = 340
Score = 176 bits (446), Expect(2) = 4e-76
Identities = 91/134 (67%), Positives = 108/134 (80%), Gaps = 2/134 (1%)
Frame = -1
Query: 975 HQQYLPSQPQLV-TYAPPVHPRSSQDDVRTLFIAGLPEDIKAREIYNLFREFPGYESSHL 799
H QY+P Q Q+ +Y P P +S +DVRTLFIAGLPED+K REIYNLFREFPGYESSHL
Sbjct: 56 HPQYIPQQQQVYDSYVPS--PLASTNDVRTLFIAGLPEDVKPREIYNLFREFPGYESSHL 113
Query: 798 RT-TASTQPFAFAVFMDQQSALMALHTLNGMVFDLEKGSTLYIDLAKSNPRSKRLRTDDD 622
R+ S+Q FAFAVF +QQSA+MALH LNGM+FDLEKGSTLYIDLAKSN R+KR R DDD
Sbjct: 114 RSPNNSSQAFAFAVFSNQQSAIMALHALNGMIFDLEKGSTLYIDLAKSNSRAKRARIDDD 173
Query: 621 RQGSEKRMKSTSFS 580
R S+K+ + ++ S
Sbjct: 174 RASSDKKARGSASS 187
Score = 137 bits (344), Expect(2) = 4e-76
Identities = 72/120 (60%), Positives = 87/120 (72%), Gaps = 7/120 (5%)
Frame = -3
Query: 580 KGHGICRRNSEATGR-------SDSSTKLNAMACPTLFVASLGPTCSEQELIQVFSRCRG 422
+ HGI N+ G S+ N C TLFVA+LGP+C+EQELIQVFSR G
Sbjct: 219 QSHGIADGNAMHDGLFLNLKKCSNPYIPTNTTPCATLFVANLGPSCNEQELIQVFSRFPG 278
Query: 421 FLKLKMQSTYGSPVAFVDFQDTACSTEALTNLQGTVLFSSTSGEGMRLEYAKSRMGLRSK 242
FLKLKMQSTYG+PV+FVDF+D +T AL +LQGT+L+SS +GEGMRLEYAKSRMG+R K
Sbjct: 279 FLKLKMQSTYGAPVSFVDFKDIPSATVALNSLQGTILYSSPAGEGMRLEYAKSRMGMRRK 338
>ref|XP_002310126.1| hypothetical protein POPTR_0007s10740g [Populus trichocarpa]
gi|222853029|gb|EEE90576.1| hypothetical protein
POPTR_0007s10740g [Populus trichocarpa]
Length = 323
Score = 159 bits (402), Expect(2) = 4e-75
Identities = 90/147 (61%), Positives = 104/147 (70%), Gaps = 11/147 (7%)
Frame = -1
Query: 981 PLHQQYLPSQPQLVTYAPPVHPRSS---------QDDVRTLFIAGLPEDIKAREIYNLFR 829
P H Y+P PQ PP P S D VRTLF+AGLP+DIK RE+YNLFR
Sbjct: 41 PHHLPYIP-HPQ-----PPPAPFVSYVSVPAYVPHDQVRTLFVAGLPDDIKPREMYNLFR 94
Query: 828 EFPGYESSHLRTTA-STQPFAFAVFMDQQSALMALHTLNGMVFDLEKGSTLYIDLAKSNP 652
EFPGYESSHLRT + ++QPFAFA F DQ SA+ A+H LNGMVFDLEKGSTLYIDLAKSN
Sbjct: 95 EFPGYESSHLRTPSQNSQPFAFATFTDQPSAVAAMHALNGMVFDLEKGSTLYIDLAKSNS 154
Query: 651 RSKRLRTDDDRQGSEKRMK-STSFSRG 574
RSKR RTDD+ +K+ + S+ FS G
Sbjct: 155 RSKRSRTDDEWSSLDKKARVSSGFSMG 181
Score = 150 bits (379), Expect(2) = 4e-75
Identities = 76/106 (71%), Positives = 88/106 (83%)
Frame = -3
Query: 559 RNSEATGRSDSSTKLNAMACPTLFVASLGPTCSEQELIQVFSRCRGFLKLKMQSTYGSPV 380
RN GR ++S+ A CPTLFVA+LG C+E+ELIQVFSRC GFLKLKMQSTYG+PV
Sbjct: 219 RNESKAGRMNNSS---APPCPTLFVANLGQNCTEEELIQVFSRCPGFLKLKMQSTYGAPV 275
Query: 379 AFVDFQDTACSTEALTNLQGTVLFSSTSGEGMRLEYAKSRMGLRSK 242
AFVDFQDTA ST AL +LQGTVL+SS +GEG+RLEYAKSRMG+R K
Sbjct: 276 AFVDFQDTASSTGALNHLQGTVLYSSVAGEGLRLEYAKSRMGMRRK 321
>ref|XP_006411485.1| hypothetical protein EUTSA_v10017030mg [Eutrema salsugineum]
gi|557112654|gb|ESQ52938.1| hypothetical protein
EUTSA_v10017030mg [Eutrema salsugineum]
Length = 290
Score = 162 bits (409), Expect(2) = 4e-75
Identities = 86/139 (61%), Positives = 99/139 (71%)
Frame = -1
Query: 981 PLHQQYLPSQPQLVTYAPPVHPRSSQDDVRTLFIAGLPEDIKAREIYNLFREFPGYESSH 802
P H YLP+ + D+VRTLF+AGLPED+K REIYNLFREFPGYE+SH
Sbjct: 31 PTHSVYLPTHASI------------GDEVRTLFVAGLPEDVKPREIYNLFREFPGYETSH 78
Query: 801 LRTTASTQPFAFAVFMDQQSALMALHTLNGMVFDLEKGSTLYIDLAKSNPRSKRLRTDDD 622
LRT+ +PFAFAVF D QSA+ +H LNGMVFDLEK STLYIDLAKSNP+SKRLRTDD
Sbjct: 79 LRTSDGAKPFAFAVFSDLQSAVAVMHALNGMVFDLEKHSTLYIDLAKSNPKSKRLRTDD- 137
Query: 621 RQGSEKRMKSTSFSRGMES 565
G E K+ S+S ES
Sbjct: 138 --GWESLKKTKSWSATPES 154
Score = 147 bits (372), Expect(2) = 4e-75
Identities = 69/106 (65%), Positives = 89/106 (83%)
Frame = -3
Query: 559 RNSEATGRSDSSTKLNAMACPTLFVASLGPTCSEQELIQVFSRCRGFLKLKMQSTYGSPV 380
+ S TG+S+++ A CPTLF+A++GP C+E EL+QVFSRCRGFLKLK+Q TYG+PV
Sbjct: 187 KRSTTTGKSNNA----AEPCPTLFIANMGPNCTESELVQVFSRCRGFLKLKIQGTYGTPV 242
Query: 379 AFVDFQDTACSTEALTNLQGTVLFSSTSGEGMRLEYAKSRMGLRSK 242
AFVDFQD +CS+EAL LQGTVL+SS +GEG+RL+YA+SRMG+R K
Sbjct: 243 AFVDFQDISCSSEALHTLQGTVLYSSLTGEGLRLQYARSRMGMRKK 288
>ref|XP_006293501.1| hypothetical protein CARUB_v10023763mg [Capsella rubella]
gi|482562209|gb|EOA26399.1| hypothetical protein
CARUB_v10023763mg [Capsella rubella]
Length = 293
Score = 155 bits (392), Expect(2) = 7e-73
Identities = 77/126 (61%), Positives = 93/126 (73%)
Frame = -1
Query: 981 PLHQQYLPSQPQLVTYAPPVHPRSSQDDVRTLFIAGLPEDIKAREIYNLFREFPGYESSH 802
P H YLP+ + ++D+VRTLF+AGLPED+K REIYNLFREFPGYE+SH
Sbjct: 31 PAHSVYLPTHASI----------GARDEVRTLFVAGLPEDVKPREIYNLFREFPGYETSH 80
Query: 801 LRTTASTQPFAFAVFMDQQSALMALHTLNGMVFDLEKGSTLYIDLAKSNPRSKRLRTDDD 622
LR++ +PFAFAVF D QSA+ +H LNGMVFDLE STL+IDLAKSNP+SKR RTDD
Sbjct: 81 LRSSDGAKPFAFAVFSDLQSAVAVMHALNGMVFDLENHSTLHIDLAKSNPKSKRTRTDDG 140
Query: 621 RQGSEK 604
Q +K
Sbjct: 141 WQSLKK 146
Score = 147 bits (370), Expect(2) = 7e-73
Identities = 72/119 (60%), Positives = 93/119 (78%), Gaps = 2/119 (1%)
Frame = -3
Query: 592 YFFLKGHGICR--RNSEATGRSDSSTKLNAMACPTLFVASLGPTCSEQELIQVFSRCRGF 419
Y + GI R + TG+S+++ A CPTLF+A++GP C+E EL+QVFSRCRGF
Sbjct: 176 YSHTQSQGIANVVRRAPTTGKSNTNV---ADPCPTLFLANMGPNCTEAELVQVFSRCRGF 232
Query: 418 LKLKMQSTYGSPVAFVDFQDTACSTEALTNLQGTVLFSSTSGEGMRLEYAKSRMGLRSK 242
LKLK+Q TYG+PVAFVDFQD +CS+EAL LQGTVL+SS +GEG+RL+YA+SRMG+R K
Sbjct: 233 LKLKIQGTYGTPVAFVDFQDISCSSEALHTLQGTVLYSSLTGEGLRLQYARSRMGMRKK 291
>ref|NP_850366.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|62321263|dbj|BAD94469.1| putative RNA-binding protein
[Arabidopsis thaliana] gi|110739960|dbj|BAF01884.1|
putative RNA-binding protein [Arabidopsis thaliana]
gi|330254999|gb|AEC10093.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
Length = 292
Score = 154 bits (389), Expect(2) = 2e-71
Identities = 79/128 (61%), Positives = 97/128 (75%)
Frame = -1
Query: 975 HQQYLPSQPQLVTYAPPVHPRSSQDDVRTLFIAGLPEDIKAREIYNLFREFPGYESSHLR 796
H YLP+ + ++D+VRTLF+AGLPED+K REIYNLFREFPGYE+SHLR
Sbjct: 33 HSVYLPTHVSI----------GARDEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLR 82
Query: 795 TTASTQPFAFAVFMDQQSALMALHTLNGMVFDLEKGSTLYIDLAKSNPRSKRLRTDDDRQ 616
++ +PFAFAVF D QSA+ +H LNGMVFDLEK STL+IDLAKSNP+SKR RTDD +
Sbjct: 83 SSDGAKPFAFAVFSDLQSAVAVMHALNGMVFDLEKHSTLHIDLAKSNPKSKRSRTDDGWE 142
Query: 615 GSEKRMKS 592
S K++KS
Sbjct: 143 -SLKKLKS 149
Score = 143 bits (361), Expect(2) = 2e-71
Identities = 69/106 (65%), Positives = 87/106 (82%), Gaps = 2/106 (1%)
Frame = -3
Query: 553 SEATGRSDSSTKLNAMA--CPTLFVASLGPTCSEQELIQVFSRCRGFLKLKMQSTYGSPV 380
+ GR+ +S K + A CPTLF+A++GP C+E ELIQVFSRCRGFLKLK+Q TYG+PV
Sbjct: 185 ANVAGRAPTSRKPSKAADPCPTLFIANMGPNCTEAELIQVFSRCRGFLKLKIQGTYGTPV 244
Query: 379 AFVDFQDTACSTEALTNLQGTVLFSSTSGEGMRLEYAKSRMGLRSK 242
AFVDFQD +CS+EAL LQGTVL+SS +GE +RL+YA+SRMG+R K
Sbjct: 245 AFVDFQDVSCSSEALHTLQGTVLYSSLTGEVLRLQYARSRMGMRKK 290
>gb|AAO37215.1| hypothetical protein [Arabidopsis thaliana]
Length = 277
Score = 154 bits (389), Expect(2) = 2e-71
Identities = 79/128 (61%), Positives = 97/128 (75%)
Frame = -1
Query: 975 HQQYLPSQPQLVTYAPPVHPRSSQDDVRTLFIAGLPEDIKAREIYNLFREFPGYESSHLR 796
H YLP+ + ++D+VRTLF+AGLPED+K REIYNLFREFPGYE+SHLR
Sbjct: 18 HSVYLPTHVSI----------GARDEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLR 67
Query: 795 TTASTQPFAFAVFMDQQSALMALHTLNGMVFDLEKGSTLYIDLAKSNPRSKRLRTDDDRQ 616
++ +PFAFAVF D QSA+ +H LNGMVFDLEK STL+IDLAKSNP+SKR RTDD +
Sbjct: 68 SSDGAKPFAFAVFSDLQSAVAVMHALNGMVFDLEKHSTLHIDLAKSNPKSKRSRTDDGWE 127
Query: 615 GSEKRMKS 592
S K++KS
Sbjct: 128 -SLKKLKS 134
Score = 143 bits (361), Expect(2) = 2e-71
Identities = 69/106 (65%), Positives = 87/106 (82%), Gaps = 2/106 (1%)
Frame = -3
Query: 553 SEATGRSDSSTKLNAMA--CPTLFVASLGPTCSEQELIQVFSRCRGFLKLKMQSTYGSPV 380
+ GR+ +S K + A CPTLF+A++GP C+E ELIQVFSRCRGFLKLK+Q TYG+PV
Sbjct: 170 ANVAGRAPTSRKPSKAADPCPTLFIANMGPNCTEAELIQVFSRCRGFLKLKIQGTYGTPV 229
Query: 379 AFVDFQDTACSTEALTNLQGTVLFSSTSGEGMRLEYAKSRMGLRSK 242
AFVDFQD +CS+EAL LQGTVL+SS +GE +RL+YA+SRMG+R K
Sbjct: 230 AFVDFQDVSCSSEALHTLQGTVLYSSLTGEVLRLQYARSRMGMRKK 275
>ref|NP_001118504.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|330255001|gb|AEC10095.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
Length = 289
Score = 154 bits (389), Expect(2) = 2e-68
Identities = 79/128 (61%), Positives = 97/128 (75%)
Frame = -1
Query: 975 HQQYLPSQPQLVTYAPPVHPRSSQDDVRTLFIAGLPEDIKAREIYNLFREFPGYESSHLR 796
H YLP+ + ++D+VRTLF+AGLPED+K REIYNLFREFPGYE+SHLR
Sbjct: 33 HSVYLPTHVSI----------GARDEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLR 82
Query: 795 TTASTQPFAFAVFMDQQSALMALHTLNGMVFDLEKGSTLYIDLAKSNPRSKRLRTDDDRQ 616
++ +PFAFAVF D QSA+ +H LNGMVFDLEK STL+IDLAKSNP+SKR RTDD +
Sbjct: 83 SSDGAKPFAFAVFSDLQSAVAVMHALNGMVFDLEKHSTLHIDLAKSNPKSKRSRTDDGWE 142
Query: 615 GSEKRMKS 592
S K++KS
Sbjct: 143 -SLKKLKS 149
Score = 133 bits (334), Expect(2) = 2e-68
Identities = 67/106 (63%), Positives = 84/106 (79%), Gaps = 2/106 (1%)
Frame = -3
Query: 553 SEATGRSDSSTKLNAMA--CPTLFVASLGPTCSEQELIQVFSRCRGFLKLKMQSTYGSPV 380
+ GR+ +S K + A CPTLF+A++GP C+E ELIQVFSRCRGFLKLK+Q TYG+PV
Sbjct: 185 ANVAGRAPTSRKPSKAADPCPTLFIANMGPNCTEAELIQVFSRCRGFLKLKIQGTYGTPV 244
Query: 379 AFVDFQDTACSTEALTNLQGTVLFSSTSGEGMRLEYAKSRMGLRSK 242
AFVDFQD +CS+EAL LQGTVL+SS +GE +RL+ SRMG+R K
Sbjct: 245 AFVDFQDVSCSSEALHTLQGTVLYSSLTGEVLRLQ---SRMGMRKK 287
>ref|XP_002879975.1| hypothetical protein ARALYDRAFT_903572 [Arabidopsis lyrata subsp.
lyrata] gi|297325814|gb|EFH56234.1| hypothetical protein
ARALYDRAFT_903572 [Arabidopsis lyrata subsp. lyrata]
Length = 289
Score = 151 bits (382), Expect(2) = 8e-68
Identities = 77/115 (66%), Positives = 91/115 (79%)
Frame = -1
Query: 909 SQDDVRTLFIAGLPEDIKAREIYNLFREFPGYESSHLRTTASTQPFAFAVFMDQQSALMA 730
++D+VRTLF+AGLPED+K REIYNLFREFPGYE+SHLR++ +PFAFAVF D QSA+
Sbjct: 43 ARDEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRSSDGAKPFAFAVFSDLQSAVTV 102
Query: 729 LHTLNGMVFDLEKGSTLYIDLAKSNPRSKRLRTDDDRQGSEKRMKSTSFSRGMES 565
+H LNGMVFDLEK STL+IDLAKSNP+SKR RTDD G E K +S ES
Sbjct: 103 MHALNGMVFDLEKYSTLHIDLAKSNPKSKRSRTDD---GWESLKKPKPWSTTTES 154
Score = 134 bits (336), Expect(2) = 8e-68
Identities = 67/101 (66%), Positives = 81/101 (80%)
Frame = -3
Query: 544 TGRSDSSTKLNAMACPTLFVASLGPTCSEQELIQVFSRCRGFLKLKMQSTYGSPVAFVDF 365
TG S + A CPTLF+A++GP C+E ELIQVFSRCRGFLKLK+Q TYG+PVAFVDF
Sbjct: 192 TGNSSKA----ADPCPTLFIANMGPNCTEAELIQVFSRCRGFLKLKIQGTYGTPVAFVDF 247
Query: 364 QDTACSTEALTNLQGTVLFSSTSGEGMRLEYAKSRMGLRSK 242
QD +CS+EAL LQGTVL+SS +GEG+RL+ SRMG+R K
Sbjct: 248 QDVSCSSEALHTLQGTVLYSSLTGEGLRLQ---SRMGMRKK 285
>ref|NP_001078040.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|110737249|dbj|BAF00572.1| putative RNA-binding
protein [Arabidopsis thaliana]
gi|330255000|gb|AEC10094.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
Length = 302
Score = 154 bits (389), Expect(2) = 4e-67
Identities = 79/128 (61%), Positives = 97/128 (75%)
Frame = -1
Query: 975 HQQYLPSQPQLVTYAPPVHPRSSQDDVRTLFIAGLPEDIKAREIYNLFREFPGYESSHLR 796
H YLP+ + ++D+VRTLF+AGLPED+K REIYNLFREFPGYE+SHLR
Sbjct: 33 HSVYLPTHVSI----------GARDEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLR 82
Query: 795 TTASTQPFAFAVFMDQQSALMALHTLNGMVFDLEKGSTLYIDLAKSNPRSKRLRTDDDRQ 616
++ +PFAFAVF D QSA+ +H LNGMVFDLEK STL+IDLAKSNP+SKR RTDD +
Sbjct: 83 SSDGAKPFAFAVFSDLQSAVAVMHALNGMVFDLEKHSTLHIDLAKSNPKSKRSRTDDGWE 142
Query: 615 GSEKRMKS 592
S K++KS
Sbjct: 143 -SLKKLKS 149
Score = 129 bits (323), Expect(2) = 4e-67
Identities = 62/96 (64%), Positives = 78/96 (81%), Gaps = 2/96 (2%)
Frame = -3
Query: 553 SEATGRSDSSTKLNAMA--CPTLFVASLGPTCSEQELIQVFSRCRGFLKLKMQSTYGSPV 380
+ GR+ +S K + A CPTLF+A++GP C+E ELIQVFSRCRGFLKLK+Q TYG+PV
Sbjct: 185 ANVAGRAPTSRKPSKAADPCPTLFIANMGPNCTEAELIQVFSRCRGFLKLKIQGTYGTPV 244
Query: 379 AFVDFQDTACSTEALTNLQGTVLFSSTSGEGMRLEY 272
AFVDFQD +CS+EAL LQGTVL+SS +GE +RL+Y
Sbjct: 245 AFVDFQDVSCSSEALHTLQGTVLYSSLTGEVLRLQY 280
>gb|AAO37217.1| hypothetical protein [Arabidopsis thaliana]
gi|61742673|gb|AAX55157.1| hypothetical protein
At2g42245 [Arabidopsis thaliana]
Length = 287
Score = 154 bits (389), Expect(2) = 4e-67
Identities = 79/128 (61%), Positives = 97/128 (75%)
Frame = -1
Query: 975 HQQYLPSQPQLVTYAPPVHPRSSQDDVRTLFIAGLPEDIKAREIYNLFREFPGYESSHLR 796
H YLP+ + ++D+VRTLF+AGLPED+K REIYNLFREFPGYE+SHLR
Sbjct: 18 HSVYLPTHVSI----------GARDEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLR 67
Query: 795 TTASTQPFAFAVFMDQQSALMALHTLNGMVFDLEKGSTLYIDLAKSNPRSKRLRTDDDRQ 616
++ +PFAFAVF D QSA+ +H LNGMVFDLEK STL+IDLAKSNP+SKR RTDD +
Sbjct: 68 SSDGAKPFAFAVFSDLQSAVAVMHALNGMVFDLEKHSTLHIDLAKSNPKSKRSRTDDGWE 127
Query: 615 GSEKRMKS 592
S K++KS
Sbjct: 128 -SLKKLKS 134
Score = 129 bits (323), Expect(2) = 4e-67
Identities = 62/96 (64%), Positives = 78/96 (81%), Gaps = 2/96 (2%)
Frame = -3
Query: 553 SEATGRSDSSTKLNAMA--CPTLFVASLGPTCSEQELIQVFSRCRGFLKLKMQSTYGSPV 380
+ GR+ +S K + A CPTLF+A++GP C+E ELIQVFSRCRGFLKLK+Q TYG+PV
Sbjct: 170 ANVAGRAPTSRKPSKAADPCPTLFIANMGPNCTEAELIQVFSRCRGFLKLKIQGTYGTPV 229
Query: 379 AFVDFQDTACSTEALTNLQGTVLFSSTSGEGMRLEY 272
AFVDFQD +CS+EAL LQGTVL+SS +GE +RL+Y
Sbjct: 230 AFVDFQDVSCSSEALHTLQGTVLYSSLTGEVLRLQY 265
>ref|XP_004966276.1| PREDICTED: cell wall integrity protein scw1-like [Setaria italica]
Length = 308
Score = 138 bits (347), Expect(2) = 3e-62
Identities = 71/105 (67%), Positives = 84/105 (80%), Gaps = 1/105 (0%)
Frame = -1
Query: 906 QDDVRTLFIAGLPEDIKAREIYNLFREFPGYESSHLRTTASTQPFAFAVFMDQQSALMAL 727
+D++RTLFIAGLP D K RE+YNLFR+FPGY SSHLRT S+Q +AFAVF DQ SAL AL
Sbjct: 55 RDELRTLFIAGLPADAKPREVYNLFRDFPGYVSSHLRTGKSSQAYAFAVFADQPSALAAL 114
Query: 726 HTLNGMVFDLEKGSTLYIDLAKSNPRSKRLRTDDDRQGS-EKRMK 595
+ NGMVFDLEK +L++DLAKSN RSKRLR+DD S EKR +
Sbjct: 115 NATNGMVFDLEKNCSLHVDLAKSNSRSKRLRSDDASPYSPEKRTR 159
Score = 129 bits (323), Expect(2) = 3e-62
Identities = 69/109 (63%), Positives = 79/109 (72%), Gaps = 2/109 (1%)
Frame = -3
Query: 553 SEATGRSDSST--KLNAMACPTLFVASLGPTCSEQELIQVFSRCRGFLKLKMQSTYGSPV 380
S + R D ST N CPTLFVA+LGP CSEQELI VFS C GF+KLKMQ+ G+PV
Sbjct: 199 SSTSVRKDPSTFAPQNNPPCPTLFVANLGPACSEQELIDVFSSCAGFVKLKMQNKLGNPV 258
Query: 379 AFVDFQDTACSTEALTNLQGTVLFSSTSGEGMRLEYAKSRMGLRSKKSR 233
AFVDF D STEAL LQG +L+SS GEG+RLEYAKSRMGLR ++
Sbjct: 259 AFVDFMDANSSTEALNRLQGVILYSS-PGEGIRLEYAKSRMGLRKHDNK 306
>gb|EMJ08043.1| hypothetical protein PRUPE_ppa027064mg [Prunus persica]
Length = 328
Score = 195 bits (495), Expect = 3e-47
Identities = 100/146 (68%), Positives = 117/146 (80%), Gaps = 6/146 (4%)
Frame = -1
Query: 993 TVAQPLH----QQYLPSQPQ-LVTYAPPVHPRSSQDDVRTLFIAGLPEDIKAREIYNLFR 829
+VA PL Q Y P P +YAP + P+ S D+VRTLF+AGLPED+K REIYNLFR
Sbjct: 34 SVAPPLQHHLVQPYFPQHPPPFSSYAPALVPQPSHDEVRTLFVAGLPEDVKPREIYNLFR 93
Query: 828 EFPGYESSHLRT-TASTQPFAFAVFMDQQSALMALHTLNGMVFDLEKGSTLYIDLAKSNP 652
EFPGYESSHLRT T +QPFAFAVF+DQQSA+ A+H LNGMVFDLEKGSTLYIDLAKSN
Sbjct: 94 EFPGYESSHLRTPTEKSQPFAFAVFLDQQSAIGAMHALNGMVFDLEKGSTLYIDLAKSNS 153
Query: 651 RSKRLRTDDDRQGSEKRMKSTSFSRG 574
RSKR RTDD+R GS+K+ + +S+SRG
Sbjct: 154 RSKRSRTDDERSGSDKKARGSSYSRG 179
Score = 157 bits (398), Expect = 5e-36
Identities = 74/91 (81%), Positives = 85/91 (93%)
Frame = -3
Query: 514 NAMACPTLFVASLGPTCSEQELIQVFSRCRGFLKLKMQSTYGSPVAFVDFQDTACSTEAL 335
N CPT+FVA+LGPTC+EQELIQVFSRC GF+KLKMQSTYG+PVAFVDFQDTACST AL
Sbjct: 236 NNTPCPTIFVANLGPTCTEQELIQVFSRCPGFIKLKMQSTYGAPVAFVDFQDTACSTGAL 295
Query: 334 TNLQGTVLFSSTSGEGMRLEYAKSRMGLRSK 242
++LQGT+L+SST+GEGMRLEYAKSRMG+R K
Sbjct: 296 SHLQGTILYSSTTGEGMRLEYAKSRMGMRKK 326
>emb|CBI21383.3| unnamed protein product [Vitis vinifera]
Length = 333
Score = 191 bits (486), Expect = 3e-46
Identities = 97/144 (67%), Positives = 117/144 (81%), Gaps = 2/144 (1%)
Frame = -1
Query: 984 QPLHQQYLPSQPQLVTYAPPVHPRSSQDDVRTLFIAGLPEDIKAREIYNLFREFPGYESS 805
QP + P P +YAPP++P++S D+VRTLFIAGLPED+K REIYNLFREFPGYESS
Sbjct: 48 QPFLFPHQPPPPPFASYAPPLYPQTSVDEVRTLFIAGLPEDVKPREIYNLFREFPGYESS 107
Query: 804 HLRTTA-STQPFAFAVFMDQQSALMALHTLNGMVFDLEKGSTLYIDLAKSNPRSKRLRTD 628
HLR+ + ++QPFAFAVF+DQQSA+ A+H LNGMVFDLEKGSTLYIDLAKSN RSKR R D
Sbjct: 108 HLRSPSQNSQPFAFAVFLDQQSAIAAMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRAD 167
Query: 627 DDRQGSEKRMK-STSFSRGMESVV 559
D+R G +K++K S FSR +S V
Sbjct: 168 DERPGLDKKVKGSAGFSRPPDSGV 191
Score = 155 bits (393), Expect = 2e-35
Identities = 75/91 (82%), Positives = 82/91 (90%)
Frame = -3
Query: 514 NAMACPTLFVASLGPTCSEQELIQVFSRCRGFLKLKMQSTYGSPVAFVDFQDTACSTEAL 335
NA CPTLFVA+LGPTCSEQELI +FSRC GFLKLKMQSTYG+PVAFVDFQDT CST AL
Sbjct: 241 NATPCPTLFVANLGPTCSEQELIDIFSRCPGFLKLKMQSTYGTPVAFVDFQDTPCSTGAL 300
Query: 334 TNLQGTVLFSSTSGEGMRLEYAKSRMGLRSK 242
+LQGTVL+SS +GEGMR+EYAKSRMGLR K
Sbjct: 301 NHLQGTVLYSSPAGEGMRIEYAKSRMGLRRK 331
>ref|XP_002283118.1| PREDICTED: uncharacterized protein LOC100247532 [Vitis vinifera]
Length = 336
Score = 191 bits (486), Expect = 3e-46
Identities = 97/144 (67%), Positives = 117/144 (81%), Gaps = 2/144 (1%)
Frame = -1
Query: 984 QPLHQQYLPSQPQLVTYAPPVHPRSSQDDVRTLFIAGLPEDIKAREIYNLFREFPGYESS 805
QP + P P +YAPP++P++S D+VRTLFIAGLPED+K REIYNLFREFPGYESS
Sbjct: 51 QPFLFPHQPPPPPFASYAPPLYPQTSVDEVRTLFIAGLPEDVKPREIYNLFREFPGYESS 110
Query: 804 HLRTTA-STQPFAFAVFMDQQSALMALHTLNGMVFDLEKGSTLYIDLAKSNPRSKRLRTD 628
HLR+ + ++QPFAFAVF+DQQSA+ A+H LNGMVFDLEKGSTLYIDLAKSN RSKR R D
Sbjct: 111 HLRSPSQNSQPFAFAVFLDQQSAIAAMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRAD 170
Query: 627 DDRQGSEKRMK-STSFSRGMESVV 559
D+R G +K++K S FSR +S V
Sbjct: 171 DERPGLDKKVKGSAGFSRPPDSGV 194
Score = 155 bits (393), Expect = 2e-35
Identities = 75/91 (82%), Positives = 82/91 (90%)
Frame = -3
Query: 514 NAMACPTLFVASLGPTCSEQELIQVFSRCRGFLKLKMQSTYGSPVAFVDFQDTACSTEAL 335
NA CPTLFVA+LGPTCSEQELI +FSRC GFLKLKMQSTYG+PVAFVDFQDT CST AL
Sbjct: 244 NATPCPTLFVANLGPTCSEQELIDIFSRCPGFLKLKMQSTYGTPVAFVDFQDTPCSTGAL 303
Query: 334 TNLQGTVLFSSTSGEGMRLEYAKSRMGLRSK 242
+LQGTVL+SS +GEGMR+EYAKSRMGLR K
Sbjct: 304 NHLQGTVLYSSPAGEGMRIEYAKSRMGLRRK 334
>ref|XP_004288011.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Fragaria
vesca subsp. vesca]
Length = 327
Score = 190 bits (482), Expect = 1e-45
Identities = 94/131 (71%), Positives = 109/131 (83%), Gaps = 1/131 (0%)
Frame = -1
Query: 966 YLPSQPQLVTYAPPVHPRSSQDDVRTLFIAGLPEDIKAREIYNLFREFPGYESSHLRT-T 790
Y P P YA P+ +S+ D+VRTLF+AGLPED+KAREIYNLFREFPGYESSHLRT T
Sbjct: 47 YPPQPPPYAPYAAPLVAQSAYDEVRTLFVAGLPEDVKAREIYNLFREFPGYESSHLRTPT 106
Query: 789 ASTQPFAFAVFMDQQSALMALHTLNGMVFDLEKGSTLYIDLAKSNPRSKRLRTDDDRQGS 610
TQPFAFAVF+DQQSA+ A+ LNGMVFDLEKGSTLYIDLAKSN RSKR RTDD+R GS
Sbjct: 107 EKTQPFAFAVFLDQQSAIGAMQALNGMVFDLEKGSTLYIDLAKSNSRSKRSRTDDERSGS 166
Query: 609 EKRMKSTSFSR 577
+K+ + +S+SR
Sbjct: 167 DKKARGSSYSR 177
Score = 154 bits (389), Expect = 6e-35
Identities = 74/91 (81%), Positives = 84/91 (92%)
Frame = -3
Query: 514 NAMACPTLFVASLGPTCSEQELIQVFSRCRGFLKLKMQSTYGSPVAFVDFQDTACSTEAL 335
N CPTLFVA+LGPTC+EQELIQVFSRC GF+KLKMQSTYG+PVAFVDFQDTA ST AL
Sbjct: 235 NNTPCPTLFVANLGPTCTEQELIQVFSRCPGFIKLKMQSTYGTPVAFVDFQDTASSTGAL 294
Query: 334 TNLQGTVLFSSTSGEGMRLEYAKSRMGLRSK 242
++LQGT+L+SSTSGEGMRLE+AKSRMG+R K
Sbjct: 295 SHLQGTILYSSTSGEGMRLEFAKSRMGMRKK 325
>emb|CAN64038.1| hypothetical protein VITISV_021557 [Vitis vinifera]
Length = 335
Score = 190 bits (482), Expect = 1e-45
Identities = 96/144 (66%), Positives = 116/144 (80%), Gaps = 2/144 (1%)
Frame = -1
Query: 984 QPLHQQYLPSQPQLVTYAPPVHPRSSQDDVRTLFIAGLPEDIKAREIYNLFREFPGYESS 805
QP + P P +YAPP++P++S D+VRTLFIAGLPED+K REIYNLFREFPGYESS
Sbjct: 48 QPFLFPHQPPPPPFASYAPPLYPQTSVDEVRTLFIAGLPEDVKPREIYNLFREFPGYESS 107
Query: 804 HLRTTA-STQPFAFAVFMDQQSALMALHTLNGMVFDLEKGSTLYIDLAKSNPRSKRLRTD 628
HLR+ + ++QPFAFAVF+DQQSA+ +H LNGMVFDLEKGSTLYIDLAKSN RSKR R D
Sbjct: 108 HLRSPSQNSQPFAFAVFLDQQSAIATMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRAD 167
Query: 627 DDRQGSEKRMK-STSFSRGMESVV 559
D+R G +K++K S FSR +S V
Sbjct: 168 DERPGLDKKVKGSAGFSRPPDSGV 191
Score = 94.0 bits (232), Expect = 1e-16
Identities = 43/51 (84%), Positives = 46/51 (90%)
Frame = -3
Query: 514 NAMACPTLFVASLGPTCSEQELIQVFSRCRGFLKLKMQSTYGSPVAFVDFQ 362
N CPTLFVA+LGPTCSEQELI +FSRC GFLKLKMQSTYG+PVAFVDFQ
Sbjct: 241 NVTPCPTLFVANLGPTCSEQELIDIFSRCPGFLKLKMQSTYGTPVAFVDFQ 291
>gb|ABR17821.1| unknown [Picea sitchensis]
Length = 302
Score = 105 bits (261), Expect(2) = 3e-43
Identities = 66/140 (47%), Positives = 84/140 (60%), Gaps = 5/140 (3%)
Frame = -1
Query: 921 HPRSSQDDVRTLFIAGLPEDIKAREIYNLFREFPGYESSHLRTTA-STQPFAFAVFMDQQ 745
H + ++ VRTLFI+GLPEDIK REIYNLFR PG+E+ L+ T Q AFAVF Q
Sbjct: 27 HNNNHKERVRTLFISGLPEDIKHREIYNLFRRRPGFEACQLKYTGRGYQIVAFAVFSHHQ 86
Query: 744 SALMALHTLNGMVFDLEKGSTLYIDLAKSNPRSKRLRTDDDRQGS-EKRMKSTSFSRGM- 571
AL A LNG+ FD E G+TL I+LA++N R KR TDD G +KR++ G+
Sbjct: 87 LALAAKDVLNGLTFDPETGATLNIELARTNSRIKRSGTDDGGNGPYDKRIRGPFGVPGVF 146
Query: 570 --ESVVEIQKPQAEVTLVQS 517
+ V E K +VQS
Sbjct: 147 DDDGVGETVKMPGSSNIVQS 166
Score = 98.2 bits (243), Expect(2) = 3e-43
Identities = 52/82 (63%), Positives = 61/82 (74%)
Frame = -3
Query: 502 CPTLFVASLGPTCSEQELIQVFSRCRGFLKLKMQSTYGSPVAFVDFQDTACSTEALTNLQ 323
CPTLFVA+LGPTC+E EL +V SR +GF LK+Q+ G PVAFVDF+D S EAL LQ
Sbjct: 197 CPTLFVANLGPTCTEGELREVLSRFQGFKMLKLQTKGGMPVAFVDFEDVTSSAEALKQLQ 256
Query: 322 GTVLFSSTSGEGMRLEYAKSRM 257
T+L SS G G+ LEYAKSRM
Sbjct: 257 DTLLPSSDRG-GLHLEYAKSRM 277