BLASTX nr result
ID: Catharanthus23_contig00021197
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00021197
(270 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containi... 143 3e-32
ref|XP_006486706.1| PREDICTED: pentatricopeptide repeat-containi... 142 5e-32
ref|XP_006422555.1| hypothetical protein CICLE_v10030410mg [Citr... 142 5e-32
ref|XP_002306200.1| hypothetical protein POPTR_0004s18470g [Popu... 139 5e-31
ref|XP_002521253.1| pentatricopeptide repeat-containing protein,... 138 9e-31
gb|EOX97578.1| Tetratricopeptide repeat (TPR)-like superfamily p... 137 2e-30
ref|XP_004290750.1| PREDICTED: pentatricopeptide repeat-containi... 130 1e-28
ref|NP_195239.1| pentatricopeptide repeat-containing protein [Ar... 128 7e-28
gb|EMJ00196.1| hypothetical protein PRUPE_ppa002025mg [Prunus pe... 128 9e-28
ref|XP_006283134.1| hypothetical protein CARUB_v10004161mg [Caps... 126 3e-27
ref|XP_006412144.1| hypothetical protein EUTSA_v10024444mg [Eutr... 126 3e-27
gb|EXB24037.1| hypothetical protein L484_006069 [Morus notabilis] 125 8e-27
ref|XP_002867090.1| pentatricopeptide repeat-containing protein ... 124 2e-26
ref|XP_006649360.1| PREDICTED: pentatricopeptide repeat-containi... 120 1e-25
gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indi... 118 9e-25
gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sat... 118 9e-25
ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containi... 116 3e-24
gb|EMS63566.1| hypothetical protein TRIUR3_03361 [Triticum urartu] 113 3e-23
dbj|BAJ85905.1| predicted protein [Hordeum vulgare subsp. vulgare] 113 3e-23
gb|EOX98269.1| Tetratricopeptide repeat (TPR)-like superfamily p... 112 5e-23
>ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic [Vitis vinifera]
gi|297744563|emb|CBI37825.3| unnamed protein product
[Vitis vinifera]
Length = 802
Score = 143 bits (360), Expect = 3e-32
Identities = 64/89 (71%), Positives = 81/89 (91%)
Frame = +1
Query: 1 WNTMIMAYAIHGLAEISIKLFSDMKEKGIKPNGSTFVSLLSSCSIAGLVDEGQKHFDLMK 180
WNT+IMAYAIHG ISI+LFS+M+EKG +PNGSTFVSLL SCS+AGLV+EG ++F+ MK
Sbjct: 499 WNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNSMK 558
Query: 181 KEYDIDPGIEHYGCMLDLLGRTGNLEFAK 267
++Y+I+PGIEHYGC+LDL+GRTGNL+ AK
Sbjct: 559 RDYNINPGIEHYGCILDLIGRTGNLDHAK 587
>ref|XP_006486706.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic-like [Citrus sinensis]
Length = 810
Score = 142 bits (358), Expect = 5e-32
Identities = 66/90 (73%), Positives = 80/90 (88%)
Frame = +1
Query: 1 WNTMIMAYAIHGLAEISIKLFSDMKEKGIKPNGSTFVSLLSSCSIAGLVDEGQKHFDLMK 180
WN +IMAYAIHGL +ISI+LFS+M+EKGIKPN STFVSLLSSCSI+G+VDEG +FD M+
Sbjct: 507 WNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVDEGWNYFDSMR 566
Query: 181 KEYDIDPGIEHYGCMLDLLGRTGNLEFAKQ 270
K+Y I PGIEHYGC++DLLGR GNL+ AK+
Sbjct: 567 KDYGIVPGIEHYGCIIDLLGRIGNLDQAKR 596
>ref|XP_006422555.1| hypothetical protein CICLE_v10030410mg [Citrus clementina]
gi|557524489|gb|ESR35795.1| hypothetical protein
CICLE_v10030410mg [Citrus clementina]
Length = 810
Score = 142 bits (358), Expect = 5e-32
Identities = 66/90 (73%), Positives = 80/90 (88%)
Frame = +1
Query: 1 WNTMIMAYAIHGLAEISIKLFSDMKEKGIKPNGSTFVSLLSSCSIAGLVDEGQKHFDLMK 180
WN +IMAYAIHGL +ISI+LFS+M+EKGIKPN STFVSLLSSCSI+G+VDEG +FD M+
Sbjct: 507 WNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVDEGWNYFDSMR 566
Query: 181 KEYDIDPGIEHYGCMLDLLGRTGNLEFAKQ 270
K+Y I PGIEHYGC++DLLGR GNL+ AK+
Sbjct: 567 KDYGIVPGIEHYGCIIDLLGRIGNLDQAKR 596
>ref|XP_002306200.1| hypothetical protein POPTR_0004s18470g [Populus trichocarpa]
gi|222849164|gb|EEE86711.1| hypothetical protein
POPTR_0004s18470g [Populus trichocarpa]
Length = 784
Score = 139 bits (349), Expect = 5e-31
Identities = 65/89 (73%), Positives = 74/89 (83%)
Frame = +1
Query: 1 WNTMIMAYAIHGLAEISIKLFSDMKEKGIKPNGSTFVSLLSSCSIAGLVDEGQKHFDLMK 180
WNTMIMAYAIHG SI+ FS+M+ KG KPNGSTFVSLL++CSI+GL+DEG F+ MK
Sbjct: 481 WNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFFNSMK 540
Query: 181 KEYDIDPGIEHYGCMLDLLGRTGNLEFAK 267
EY IDPGIEHYGCMLDLLGR GNL+ AK
Sbjct: 541 VEYGIDPGIEHYGCMLDLLGRNGNLDEAK 569
>ref|XP_002521253.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223539521|gb|EEF41109.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 484
Score = 138 bits (347), Expect = 9e-31
Identities = 65/90 (72%), Positives = 76/90 (84%)
Frame = +1
Query: 1 WNTMIMAYAIHGLAEISIKLFSDMKEKGIKPNGSTFVSLLSSCSIAGLVDEGQKHFDLMK 180
WNTMIMAY IHG +SI+LFS+M+E GIKPN STFVSLLSSCSI GLVDEG + F+ MK
Sbjct: 181 WNTMIMAYGIHGFGTMSIQLFSEMRENGIKPNESTFVSLLSSCSITGLVDEGWEFFNSMK 240
Query: 181 KEYDIDPGIEHYGCMLDLLGRTGNLEFAKQ 270
+Y+ID GIEH+GCM+DLLGRTGNL+ A Q
Sbjct: 241 SDYNIDHGIEHFGCMVDLLGRTGNLDAAMQ 270
>gb|EOX97578.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
[Theobroma cacao]
Length = 810
Score = 137 bits (344), Expect = 2e-30
Identities = 64/89 (71%), Positives = 76/89 (85%)
Frame = +1
Query: 1 WNTMIMAYAIHGLAEISIKLFSDMKEKGIKPNGSTFVSLLSSCSIAGLVDEGQKHFDLMK 180
WNT+IMAYAIHG ISI LF +M E GI+PN STFVSLLSSCSI+GLVDEG ++F+ MK
Sbjct: 505 WNTIIMAYAIHGFGRISIALFREMIENGIEPNKSTFVSLLSSCSISGLVDEGWEYFNSMK 564
Query: 181 KEYDIDPGIEHYGCMLDLLGRTGNLEFAK 267
++Y IDPGIEH+GCMLDL+GRT NL+ AK
Sbjct: 565 RDYGIDPGIEHFGCMLDLIGRTKNLDLAK 593
>ref|XP_004290750.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 803
Score = 130 bits (328), Expect = 1e-28
Identities = 59/89 (66%), Positives = 74/89 (83%)
Frame = +1
Query: 1 WNTMIMAYAIHGLAEISIKLFSDMKEKGIKPNGSTFVSLLSSCSIAGLVDEGQKHFDLMK 180
WNT+IMAYAIHG S +LF +M +GI+PN STFVSLL++CS++G+VDEG K++ MK
Sbjct: 500 WNTIIMAYAIHGFGRSSTRLFCEMVGEGIQPNASTFVSLLTACSVSGMVDEGWKYYASMK 559
Query: 181 KEYDIDPGIEHYGCMLDLLGRTGNLEFAK 267
EY IDPGIEHYGCM+DL+GRTGNL+ AK
Sbjct: 560 LEYGIDPGIEHYGCMIDLMGRTGNLDQAK 588
>ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098809|sp|O49619.1|PP350_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g35130, chloroplastic; Flags: Precursor
gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis
thaliana] gi|7270464|emb|CAB80230.1| putative protein
[Arabidopsis thaliana] gi|332661071|gb|AEE86471.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 804
Score = 128 bits (322), Expect = 7e-28
Identities = 57/90 (63%), Positives = 73/90 (81%)
Frame = +1
Query: 1 WNTMIMAYAIHGLAEISIKLFSDMKEKGIKPNGSTFVSLLSSCSIAGLVDEGQKHFDLMK 180
WN++IMAYA+HG IS+ LFS+M + PN STF SLL++CSI+G+VDEG ++F+ MK
Sbjct: 500 WNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMK 559
Query: 181 KEYDIDPGIEHYGCMLDLLGRTGNLEFAKQ 270
+EY IDPGIEHYGCMLDL+GRTGN AK+
Sbjct: 560 REYGIDPGIEHYGCMLDLIGRTGNFSAAKR 589
>gb|EMJ00196.1| hypothetical protein PRUPE_ppa002025mg [Prunus persica]
Length = 727
Score = 128 bits (321), Expect = 9e-28
Identities = 59/89 (66%), Positives = 75/89 (84%)
Frame = +1
Query: 1 WNTMIMAYAIHGLAEISIKLFSDMKEKGIKPNGSTFVSLLSSCSIAGLVDEGQKHFDLMK 180
WNT+IMAYAIHG SI LFS M+++GI+PN STFVSLL++CS++G+V+EG K+F+ MK
Sbjct: 424 WNTIIMAYAIHGFGTKSIDLFSKMRDEGIQPNESTFVSLLTACSVSGMVNEGWKYFNSMK 483
Query: 181 KEYDIDPGIEHYGCMLDLLGRTGNLEFAK 267
+ IDPGIEHYGCM+DLLGR GNL+ AK
Sbjct: 484 LDSGIDPGIEHYGCMIDLLGRKGNLDQAK 512
>ref|XP_006283134.1| hypothetical protein CARUB_v10004161mg [Capsella rubella]
gi|482551839|gb|EOA16032.1| hypothetical protein
CARUB_v10004161mg [Capsella rubella]
Length = 807
Score = 126 bits (317), Expect = 3e-27
Identities = 56/90 (62%), Positives = 73/90 (81%)
Frame = +1
Query: 1 WNTMIMAYAIHGLAEISIKLFSDMKEKGIKPNGSTFVSLLSSCSIAGLVDEGQKHFDLMK 180
WN++IMAYA+HG IS+ LFS+M + PN STF SLL++CSI+G+VDEG ++F++MK
Sbjct: 500 WNSIIMAYAVHGFGRISVCLFSEMIASKVNPNNSTFASLLAACSISGMVDEGWEYFEMMK 559
Query: 181 KEYDIDPGIEHYGCMLDLLGRTGNLEFAKQ 270
+EY IDPGIEHYG MLDL+GRTGN AK+
Sbjct: 560 REYGIDPGIEHYGYMLDLIGRTGNFSAAKR 589
>ref|XP_006412144.1| hypothetical protein EUTSA_v10024444mg [Eutrema salsugineum]
gi|557113314|gb|ESQ53597.1| hypothetical protein
EUTSA_v10024444mg [Eutrema salsugineum]
Length = 804
Score = 126 bits (316), Expect = 3e-27
Identities = 57/90 (63%), Positives = 71/90 (78%)
Frame = +1
Query: 1 WNTMIMAYAIHGLAEISIKLFSDMKEKGIKPNGSTFVSLLSSCSIAGLVDEGQKHFDLMK 180
WN++IMAYA+HG SI LFS+M G+ PN STF SLL++CSI+G++DEG HF+ MK
Sbjct: 499 WNSIIMAYAVHGFGRNSICLFSEMMTTGVNPNKSTFASLLAACSISGMIDEGWDHFNSMK 558
Query: 181 KEYDIDPGIEHYGCMLDLLGRTGNLEFAKQ 270
+EY IDPGIEHYG MLDL+GRTGN AK+
Sbjct: 559 REYGIDPGIEHYGYMLDLIGRTGNFSSAKR 588
>gb|EXB24037.1| hypothetical protein L484_006069 [Morus notabilis]
Length = 797
Score = 125 bits (313), Expect = 8e-27
Identities = 57/89 (64%), Positives = 75/89 (84%)
Frame = +1
Query: 1 WNTMIMAYAIHGLAEISIKLFSDMKEKGIKPNGSTFVSLLSSCSIAGLVDEGQKHFDLMK 180
WNT+IMAYAIHG SI+LFS M+++GI+PN TFVSLL+SCS +G+VDE + ++ MK
Sbjct: 492 WNTIIMAYAIHGFGRKSIELFSMMRDEGIRPNYITFVSLLTSCSTSGMVDEAWRFYNSMK 551
Query: 181 KEYDIDPGIEHYGCMLDLLGRTGNLEFAK 267
++Y+I PGIEHYGC+LDL+GRTGNL+ AK
Sbjct: 552 RDYNIVPGIEHYGCILDLIGRTGNLDRAK 580
>ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297312926|gb|EFH43349.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 803
Score = 124 bits (310), Expect = 2e-26
Identities = 56/90 (62%), Positives = 72/90 (80%)
Frame = +1
Query: 1 WNTMIMAYAIHGLAEISIKLFSDMKEKGIKPNGSTFVSLLSSCSIAGLVDEGQKHFDLMK 180
WN++IMAYA+HG IS+ LFS+M + PN STF SLL++CSI+G+VDEG ++F+ MK
Sbjct: 496 WNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLLAACSISGMVDEGWEYFESMK 555
Query: 181 KEYDIDPGIEHYGCMLDLLGRTGNLEFAKQ 270
+EY IDPGIEHYG MLDL+GRTGN AK+
Sbjct: 556 REYGIDPGIEHYGYMLDLIGRTGNFSSAKR 585
>ref|XP_006649360.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic-like [Oryza brachyantha]
Length = 787
Score = 120 bits (302), Expect = 1e-25
Identities = 53/85 (62%), Positives = 70/85 (82%)
Frame = +1
Query: 1 WNTMIMAYAIHGLAEISIKLFSDMKEKGIKPNGSTFVSLLSSCSIAGLVDEGQKHFDLMK 180
WNTMIM YAIHG + ++++F +MK G++PN STFVS+L++CS++GLVDEG HF+LM
Sbjct: 486 WNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLML 545
Query: 181 KEYDIDPGIEHYGCMLDLLGRTGNL 255
+EYD+ P IEHYGCM DLLGR G+L
Sbjct: 546 QEYDMIPQIEHYGCMTDLLGREGDL 570
>gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
Length = 781
Score = 118 bits (295), Expect = 9e-25
Identities = 52/85 (61%), Positives = 69/85 (81%)
Frame = +1
Query: 1 WNTMIMAYAIHGLAEISIKLFSDMKEKGIKPNGSTFVSLLSSCSIAGLVDEGQKHFDLMK 180
WNTMIM YAIHG + ++++F +MK G++PN STFVS+L++CS++GLVDEG HF+LM
Sbjct: 480 WNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLML 539
Query: 181 KEYDIDPGIEHYGCMLDLLGRTGNL 255
+EY + P IEHYGCM DLLGR G+L
Sbjct: 540 QEYGMIPQIEHYGCMTDLLGREGDL 564
>gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group] gi|125584837|gb|EAZ25501.1| hypothetical protein
OsJ_09324 [Oryza sativa Japonica Group]
Length = 781
Score = 118 bits (295), Expect = 9e-25
Identities = 52/85 (61%), Positives = 69/85 (81%)
Frame = +1
Query: 1 WNTMIMAYAIHGLAEISIKLFSDMKEKGIKPNGSTFVSLLSSCSIAGLVDEGQKHFDLMK 180
WNTMIM YAIHG + ++++F +MK G++PN STFVS+L++CS++GLVDEG HF+LM
Sbjct: 480 WNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLML 539
Query: 181 KEYDIDPGIEHYGCMLDLLGRTGNL 255
+EY + P IEHYGCM DLLGR G+L
Sbjct: 540 QEYGMIPQIEHYGCMTDLLGREGDL 564
>ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic-like [Brachypodium distachyon]
Length = 782
Score = 116 bits (291), Expect = 3e-24
Identities = 50/85 (58%), Positives = 70/85 (82%)
Frame = +1
Query: 1 WNTMIMAYAIHGLAEISIKLFSDMKEKGIKPNGSTFVSLLSSCSIAGLVDEGQKHFDLMK 180
WNT+IM YAIHG +I++++FS+MK G++PN STFVS+L++CS++G+ DEG F+LM+
Sbjct: 481 WNTIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEGWIQFNLMQ 540
Query: 181 KEYDIDPGIEHYGCMLDLLGRTGNL 255
++Y I P IEHYGCM DLLGR G+L
Sbjct: 541 RDYGIIPQIEHYGCMTDLLGRAGDL 565
>gb|EMS63566.1| hypothetical protein TRIUR3_03361 [Triticum urartu]
Length = 630
Score = 113 bits (282), Expect = 3e-23
Identities = 50/90 (55%), Positives = 69/90 (76%)
Frame = +1
Query: 1 WNTMIMAYAIHGLAEISIKLFSDMKEKGIKPNGSTFVSLLSSCSIAGLVDEGQKHFDLMK 180
WNTMIM YAIHG ++++FS+M+ G++PN STFVS+L++CS++GL DEG F+ M+
Sbjct: 324 WNTMIMGYAIHGQGRTALEMFSEMRCNGLQPNESTFVSVLTACSVSGLTDEGWTQFNSMQ 383
Query: 181 KEYDIDPGIEHYGCMLDLLGRTGNLEFAKQ 270
++Y + P IEHYGCM DLLGR G+L A Q
Sbjct: 384 RDYGMIPQIEHYGCMTDLLGRAGDLREAMQ 413
>dbj|BAJ85905.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 788
Score = 113 bits (282), Expect = 3e-23
Identities = 50/90 (55%), Positives = 69/90 (76%)
Frame = +1
Query: 1 WNTMIMAYAIHGLAEISIKLFSDMKEKGIKPNGSTFVSLLSSCSIAGLVDEGQKHFDLMK 180
WNTMIM YAIHG ++++FS+MK G++PN STFVS+L++CS++GL DEG F+ M+
Sbjct: 482 WNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFVSVLTACSVSGLTDEGWTQFNSMQ 541
Query: 181 KEYDIDPGIEHYGCMLDLLGRTGNLEFAKQ 270
++Y + P IEHYGCM DLLGR G+L+ Q
Sbjct: 542 RDYGMIPQIEHYGCMTDLLGRAGDLKEVMQ 571
>gb|EOX98269.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 820
Score = 112 bits (280), Expect = 5e-23
Identities = 51/88 (57%), Positives = 70/88 (79%)
Frame = +1
Query: 1 WNTMIMAYAIHGLAEISIKLFSDMKEKGIKPNGSTFVSLLSSCSIAGLVDEGQKHFDLMK 180
WN +I + IHG AE ++KLF +M+E+G+KP+ TFVSLLS+CS +GLVDEGQ F +M+
Sbjct: 517 WNAIISCHGIHGHAEKALKLFREMREEGVKPDHVTFVSLLSACSHSGLVDEGQWCFHVMQ 576
Query: 181 KEYDIDPGIEHYGCMLDLLGRTGNLEFA 264
+EY I+P ++HYGCM+DL GR G+LE A
Sbjct: 577 EEYGIEPILKHYGCMVDLFGRAGHLEMA 604
Score = 55.1 bits (131), Expect = 1e-05
Identities = 34/90 (37%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Frame = +1
Query: 1 WNTMIMAYAIHGLAEISIKLFSDMKE-KGIKPNGSTFVSLLSSCSIAGLVDEGQK-HFDL 174
WNT+I YA +GLA +I+ + M+E K I PN +T+VS+L + S G + +G + H L
Sbjct: 415 WNTLITGYAQNGLAGEAIEAYGMMQECKEITPNQATWVSILPAYSNVGALQQGMRVHGRL 474
Query: 175 MKKEYDIDPGIEHYGCMLDLLGRTGNLEFA 264
+K + +D I C++D+ G+ G L+ A
Sbjct: 475 IKNSFYLD--IFVGTCLIDMYGKCGKLDDA 502