BLASTX nr result
ID: Catharanthus23_contig00020990
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00020990
(461 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006344998.1| PREDICTED: pentatricopeptide repeat-containi... 94 2e-17
ref|XP_004236153.1| PREDICTED: pentatricopeptide repeat-containi... 94 2e-17
ref|XP_002511467.1| pentatricopeptide repeat-containing protein,... 92 9e-17
ref|XP_004501962.1| PREDICTED: pentatricopeptide repeat-containi... 91 2e-16
ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containi... 91 2e-16
ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containi... 91 2e-16
ref|XP_004301284.1| PREDICTED: pentatricopeptide repeat-containi... 90 4e-16
ref|XP_006476683.1| PREDICTED: pentatricopeptide repeat-containi... 89 8e-16
ref|XP_006439730.1| hypothetical protein CICLE_v10019863mg [Citr... 89 8e-16
gb|EMJ12275.1| hypothetical protein PRUPE_ppa017205mg, partial [... 87 2e-15
ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containi... 86 7e-15
ref|XP_002321560.2| pentatricopeptide repeat-containing family p... 85 9e-15
gb|ESW04378.1| hypothetical protein PHAVU_011G090300g [Phaseolus... 85 1e-14
ref|XP_006591092.1| PREDICTED: pentatricopeptide repeat-containi... 85 1e-14
gb|EOY20581.1| Pentatricopeptide repeat superfamily protein isof... 84 2e-14
sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-c... 82 1e-13
gb|EPS67440.1| hypothetical protein M569_07334, partial [Genlise... 81 1e-13
gb|AFW72799.1| hypothetical protein ZEAMMB73_717335 [Zea mays] 74 2e-11
ref|XP_002452757.1| hypothetical protein SORBIDRAFT_04g031880 [S... 73 3e-11
ref|XP_004955150.1| PREDICTED: pentatricopeptide repeat-containi... 73 4e-11
>ref|XP_006344998.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like isoform X1 [Solanum tuberosum]
gi|565356286|ref|XP_006344999.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like isoform X2 [Solanum tuberosum]
gi|565356288|ref|XP_006345000.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like isoform X3 [Solanum tuberosum]
Length = 486
Score = 93.6 bits (231), Expect = 2e-17
Identities = 47/58 (81%), Positives = 50/58 (86%)
Frame = -3
Query: 459 LLVAGKLLVEMIGRGFLPRKFIFNRVLNGLLLTGNQDFAREILRNESGLGRLPRHFRL 286
LLVAGKLL EM+ RGFLPRKF FNRVLNGLLLTGNQDFA+EILR S GRLP HF+L
Sbjct: 429 LLVAGKLLTEMVDRGFLPRKFTFNRVLNGLLLTGNQDFAKEILRLVSKSGRLPCHFKL 486
>ref|XP_004236153.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Solanum lycopersicum]
Length = 492
Score = 93.6 bits (231), Expect = 2e-17
Identities = 47/58 (81%), Positives = 50/58 (86%)
Frame = -3
Query: 459 LLVAGKLLVEMIGRGFLPRKFIFNRVLNGLLLTGNQDFAREILRNESGLGRLPRHFRL 286
LLVAGKLL EM+ RGFLPRKF FNRVLNGLLLTGNQDFA+EILR S GRLP HF+L
Sbjct: 435 LLVAGKLLTEMVDRGFLPRKFTFNRVLNGLLLTGNQDFAKEILRLVSKSGRLPCHFKL 492
>ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223550582|gb|EEF52069.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 482
Score = 91.7 bits (226), Expect = 9e-17
Identities = 45/58 (77%), Positives = 50/58 (86%)
Frame = -3
Query: 459 LLVAGKLLVEMIGRGFLPRKFIFNRVLNGLLLTGNQDFAREILRNESGLGRLPRHFRL 286
LLVAGKLLVEM+ RGFLPRK FNRVL+GLLLTGNQDFA+EIL + G GRLPR F+L
Sbjct: 425 LLVAGKLLVEMVDRGFLPRKLTFNRVLDGLLLTGNQDFAKEILSLQGGCGRLPRKFKL 482
>ref|XP_004501962.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cicer arietinum]
Length = 498
Score = 90.9 bits (224), Expect = 2e-16
Identities = 43/58 (74%), Positives = 51/58 (87%)
Frame = -3
Query: 459 LLVAGKLLVEMIGRGFLPRKFIFNRVLNGLLLTGNQDFAREILRNESGLGRLPRHFRL 286
L+VAGKLL+EM+GRGFLPRKF FNRVLNGL+LTGN+DFA EILR +S GR+ RH +L
Sbjct: 441 LVVAGKLLIEMVGRGFLPRKFTFNRVLNGLVLTGNRDFANEILRMQSRCGRILRHVKL 498
>ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
gi|449487784|ref|XP_004157799.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
Length = 502
Score = 90.9 bits (224), Expect = 2e-16
Identities = 44/58 (75%), Positives = 51/58 (87%)
Frame = -3
Query: 459 LLVAGKLLVEMIGRGFLPRKFIFNRVLNGLLLTGNQDFAREILRNESGLGRLPRHFRL 286
L+VAGKLL+EM+ RGF+PRKF FNRVLNGLLLTGNQ FA+EILR +S GRLPR F+L
Sbjct: 445 LVVAGKLLLEMVDRGFIPRKFTFNRVLNGLLLTGNQAFAKEILRLQSKCGRLPRQFKL 502
>ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Vitis vinifera]
Length = 450
Score = 90.5 bits (223), Expect = 2e-16
Identities = 44/58 (75%), Positives = 50/58 (86%)
Frame = -3
Query: 459 LLVAGKLLVEMIGRGFLPRKFIFNRVLNGLLLTGNQDFAREILRNESGLGRLPRHFRL 286
LL AGKLL+EM+ RGFLPRKF FNRVL+GLLLTGNQDFA+EILR +S GRLPR +L
Sbjct: 393 LLTAGKLLIEMVERGFLPRKFTFNRVLDGLLLTGNQDFAKEILRLQSRCGRLPRRLKL 450
>ref|XP_004301284.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 489
Score = 89.7 bits (221), Expect = 4e-16
Identities = 43/58 (74%), Positives = 51/58 (87%)
Frame = -3
Query: 459 LLVAGKLLVEMIGRGFLPRKFIFNRVLNGLLLTGNQDFAREILRNESGLGRLPRHFRL 286
LLVAGKLL+EM+ RGFLPRK+ FN+VL+GLLLTGNQ FA+EILR++S GRLPR RL
Sbjct: 432 LLVAGKLLIEMVDRGFLPRKYTFNKVLDGLLLTGNQGFAKEILRSQSRCGRLPRQVRL 489
>ref|XP_006476683.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like isoform X1 [Citrus sinensis]
gi|568845657|ref|XP_006476684.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like isoform X2 [Citrus sinensis]
Length = 493
Score = 88.6 bits (218), Expect = 8e-16
Identities = 43/58 (74%), Positives = 49/58 (84%)
Frame = -3
Query: 459 LLVAGKLLVEMIGRGFLPRKFIFNRVLNGLLLTGNQDFAREILRNESGLGRLPRHFRL 286
LLVAGKLL+EM+ RGF+PRKF FNRVLNGLLL GNQ A+EILR +S GRLPR F+L
Sbjct: 436 LLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLMGNQGLAKEILRLQSRCGRLPRQFKL 493
>ref|XP_006439730.1| hypothetical protein CICLE_v10019863mg [Citrus clementina]
gi|557541992|gb|ESR52970.1| hypothetical protein
CICLE_v10019863mg [Citrus clementina]
Length = 493
Score = 88.6 bits (218), Expect = 8e-16
Identities = 43/58 (74%), Positives = 49/58 (84%)
Frame = -3
Query: 459 LLVAGKLLVEMIGRGFLPRKFIFNRVLNGLLLTGNQDFAREILRNESGLGRLPRHFRL 286
LLVAGKLL+EM+ RGF+PRKF FNRVLNGLLL GNQ A+EILR +S GRLPR F+L
Sbjct: 436 LLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGNQGLAKEILRLQSRCGRLPRQFKL 493
>gb|EMJ12275.1| hypothetical protein PRUPE_ppa017205mg, partial [Prunus persica]
Length = 403
Score = 87.4 bits (215), Expect = 2e-15
Identities = 42/58 (72%), Positives = 50/58 (86%)
Frame = -3
Query: 459 LLVAGKLLVEMIGRGFLPRKFIFNRVLNGLLLTGNQDFAREILRNESGLGRLPRHFRL 286
LLVAGKLL+EM+ RGFLPR+F FNR+L+GLLLTGNQ FA+EILR +S GRLPR +L
Sbjct: 346 LLVAGKLLIEMVNRGFLPRRFTFNRILDGLLLTGNQAFAQEILRLQSRCGRLPRQVKL 403
>ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 495
Score = 85.5 bits (210), Expect = 7e-15
Identities = 40/58 (68%), Positives = 50/58 (86%)
Frame = -3
Query: 459 LLVAGKLLVEMIGRGFLPRKFIFNRVLNGLLLTGNQDFAREILRNESGLGRLPRHFRL 286
L+VAGKLL++M+ RGFLPRKF FNRVLNGL++TGNQDFA+EILR +S GR+ R +L
Sbjct: 438 LVVAGKLLMDMVDRGFLPRKFTFNRVLNGLVITGNQDFAKEILRMQSRCGRIVRRLKL 495
>ref|XP_002321560.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550322291|gb|EEF05687.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 491
Score = 85.1 bits (209), Expect = 9e-15
Identities = 42/58 (72%), Positives = 48/58 (82%)
Frame = -3
Query: 459 LLVAGKLLVEMIGRGFLPRKFIFNRVLNGLLLTGNQDFAREILRNESGLGRLPRHFRL 286
LLVAG LL+EM+ RGF+PRKF FNRVLNGLLLTGNQ FA+EILR +S GRL R +L
Sbjct: 434 LLVAGNLLIEMVDRGFVPRKFTFNRVLNGLLLTGNQGFAKEILRLQSRCGRLTRKIKL 491
>gb|ESW04378.1| hypothetical protein PHAVU_011G090300g [Phaseolus vulgaris]
Length = 491
Score = 84.7 bits (208), Expect = 1e-14
Identities = 40/58 (68%), Positives = 48/58 (82%)
Frame = -3
Query: 459 LLVAGKLLVEMIGRGFLPRKFIFNRVLNGLLLTGNQDFAREILRNESGLGRLPRHFRL 286
L+VAGKLL+EM+ RGFLPRKF FNRVLNGL +TGNQDFA+EILR + GR+ R +L
Sbjct: 434 LVVAGKLLMEMVDRGFLPRKFTFNRVLNGLAITGNQDFAKEILRKQGRCGRVVRRLKL 491
>ref|XP_006591092.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial isoform X1 [Glycine max]
gi|571489017|ref|XP_006591093.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g74900,
mitochondrial isoform X2 [Glycine max]
Length = 492
Score = 84.7 bits (208), Expect = 1e-14
Identities = 40/58 (68%), Positives = 50/58 (86%)
Frame = -3
Query: 459 LLVAGKLLVEMIGRGFLPRKFIFNRVLNGLLLTGNQDFAREILRNESGLGRLPRHFRL 286
L+VAGKLL+EM+ RGFLPRKF FNRVLNGL++TGNQDFA++ILR +S GR+ R +L
Sbjct: 435 LVVAGKLLMEMVERGFLPRKFTFNRVLNGLVITGNQDFAKDILRMQSRCGRVVRRLKL 492
>gb|EOY20581.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
cacao] gi|508773328|gb|EOY20584.1| Pentatricopeptide
repeat superfamily protein isoform 1 [Theobroma cacao]
Length = 491
Score = 84.0 bits (206), Expect = 2e-14
Identities = 40/58 (68%), Positives = 49/58 (84%)
Frame = -3
Query: 459 LLVAGKLLVEMIGRGFLPRKFIFNRVLNGLLLTGNQDFAREILRNESGLGRLPRHFRL 286
L+VAGKLL+EM+ RGF+PR+ FNRVL+GLLLTGNQ FA+ ILR +S GRLPR F+L
Sbjct: 434 LVVAGKLLIEMVDRGFMPRRLTFNRVLDGLLLTGNQGFAKGILRLQSRCGRLPRQFKL 491
>sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74900, mitochondrial; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
Precursor gi|5882733|gb|AAD55286.1|AC008263_17 Contains
a PF|01535 DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical
protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 81.6 bits (200), Expect = 1e-13
Identities = 43/59 (72%), Positives = 50/59 (84%), Gaps = 1/59 (1%)
Frame = -3
Query: 459 LLVAGKLLVEMIGRGFLPRKFIFNRVLNGLLLTGNQDFAREILRNESGLG-RLPRHFRL 286
++VAGKLL+EM+ RGF+PRKF FNRVLNGLLLTGNQ FA+EILR +S G RL R FRL
Sbjct: 424 MVVAGKLLLEMVERGFIPRKFTFNRVLNGLLLTGNQAFAKEILRLQSKSGSRLLRKFRL 482
>gb|EPS67440.1| hypothetical protein M569_07334, partial [Genlisea aurea]
Length = 451
Score = 81.3 bits (199), Expect = 1e-13
Identities = 39/58 (67%), Positives = 48/58 (82%)
Frame = -3
Query: 459 LLVAGKLLVEMIGRGFLPRKFIFNRVLNGLLLTGNQDFAREILRNESGLGRLPRHFRL 286
L VAG+LL+EM+GRGFLPR+F NRVLNGLL+TGNQ FAR++LR + G LPR F+L
Sbjct: 394 LQVAGELLIEMVGRGFLPRRFTVNRVLNGLLVTGNQTFARQVLRVLTANGLLPRKFKL 451
>gb|AFW72799.1| hypothetical protein ZEAMMB73_717335 [Zea mays]
Length = 501
Score = 74.3 bits (181), Expect = 2e-11
Identities = 34/58 (58%), Positives = 46/58 (79%)
Frame = -3
Query: 459 LLVAGKLLVEMIGRGFLPRKFIFNRVLNGLLLTGNQDFAREILRNESGLGRLPRHFRL 286
+ VA +++VEM+ RG+LPRKF+FNRVLNGL+LTGNQ+ +RE+LR + RL R RL
Sbjct: 444 MAVAARMVVEMVDRGYLPRKFMFNRVLNGLMLTGNQELSRELLRMQEKYTRLRREIRL 501
>ref|XP_002452757.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
gi|241932588|gb|EES05733.1| hypothetical protein
SORBIDRAFT_04g031880 [Sorghum bicolor]
Length = 502
Score = 73.2 bits (178), Expect = 3e-11
Identities = 33/58 (56%), Positives = 46/58 (79%)
Frame = -3
Query: 459 LLVAGKLLVEMIGRGFLPRKFIFNRVLNGLLLTGNQDFAREILRNESGLGRLPRHFRL 286
+ VA +++VEM+ RG+LPR+F+FNRVLNGL+LTGNQ+ +RE+LR + RL R RL
Sbjct: 445 MAVAARMVVEMVDRGYLPRRFMFNRVLNGLMLTGNQELSRELLRMQEKYTRLRREIRL 502
>ref|XP_004955150.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Setaria italica]
Length = 505
Score = 72.8 bits (177), Expect = 4e-11
Identities = 32/58 (55%), Positives = 46/58 (79%)
Frame = -3
Query: 459 LLVAGKLLVEMIGRGFLPRKFIFNRVLNGLLLTGNQDFAREILRNESGLGRLPRHFRL 286
+ VA +++V+M+ RG+LPR+F+FNRVLNGL+LTGNQ+ +RE+LR + RL R RL
Sbjct: 448 MAVAARMVVDMVDRGYLPRRFMFNRVLNGLMLTGNQELSRELLRMQEKYARLRREIRL 505