BLASTX nr result
ID: Catharanthus23_contig00020941
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00020941
(691 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_008963644.1| NADH dehydrogenase subunit 2 (chloroplast) [... 60 5e-07
ref|YP_008145834.1| NADH-plastoquinone oxidoreductase subunit 2 ... 60 5e-07
ref|YP_008145386.1| NADH-plastoquinone oxidoreductase subunit 2 ... 60 5e-07
ref|YP_538808.1| NADH dehydrogenase subunit 2 [Glycine max] gi|9... 60 5e-07
ref|YP_008082777.1| NADH-plastoquinone oxidoreductase subunit 2 ... 60 6e-07
gb|AFU96394.1| NdhB, partial (chloroplast) [Turnera ulmifolia] 60 6e-07
gb|AFU96382.1| NdhB, partial (chloroplast) [Passiflora ciliata] 60 6e-07
gb|AFU96381.1| NdhB, partial (chloroplast) [Ouratea sp. CCD-2012] 60 6e-07
gb|AFU96379.1| NdhB, partial (chloroplast) [Medusagyne oppositif... 60 6e-07
gb|AFU96366.1| NdhB, partial (chloroplast) [Flueggea suffruticosa] 60 6e-07
gb|AFS35467.1| NADH-plastoquinone oxidoreductase subunit 2, part... 60 6e-07
gb|AFQ39498.1| NADH-plastoquinone oxidoreductase subunit 2 [Frag... 60 6e-07
gb|AFQ39471.1| NADH-plastoquinone oxidoreductase subunit 2 [Frag... 60 6e-07
ref|YP_004842297.1| NADH-plastoquinone oxidoreductase subunit 2 ... 60 6e-07
ref|YP_004842282.1| NADH-plastoquinone oxidoreductase subunit 2 ... 60 6e-07
gb|AEK78284.1| NADH-plastoquinone oxidoreductase subunit 2 [Steg... 60 6e-07
gb|AEK78269.1| NADH-plastoquinone oxidoreductase subunit 2 [Rhab... 60 6e-07
gb|AEK78261.1| NADH-plastoquinone oxidoreductase subunit 2 [Pers... 60 6e-07
gb|AEK78229.1| NADH-plastoquinone oxidoreductase subunit 2 [Limo... 60 6e-07
gb|AEK71547.1| NADH-plastoquinone oxidoreductase subunit 2 [Picr... 60 6e-07
>ref|YP_008963644.1| NADH dehydrogenase subunit 2 (chloroplast) [Lupinus luteus]
gi|568244876|ref|YP_008963659.1| NADH dehydrogenase
subunit 2 (chloroplast) [Lupinus luteus]
gi|485474355|gb|AGK82957.1| NADH dehydrogenase subunit 2
(chloroplast) [Lupinus luteus]
gi|485474371|gb|AGK82973.1| NADH dehydrogenase subunit 2
(chloroplast) [Lupinus luteus]
Length = 500
Score = 60.5 bits (145), Expect = 5e-07
Identities = 30/46 (65%), Positives = 35/46 (76%)
Frame = +1
Query: 247 LYLIDSTSDEKDIHWFYFIPSITSVMSTSPILF**REEPTNSFSGN 384
L +IDSTSD+KDI WFYFI S + VMS + +LF REEP SFSGN
Sbjct: 35 LLMIDSTSDQKDISWFYFISSTSLVMSITALLFRWREEPMISFSGN 80
>ref|YP_008145834.1| NADH-plastoquinone oxidoreductase subunit 2 (chloroplast) [Glycine
stenophita] gi|526176038|ref|YP_008145850.1|
NADH-plastoquinone oxidoreductase subunit 2
(chloroplast) [Glycine stenophita]
gi|514253106|gb|AGO44365.1| NADH-plastoquinone
oxidoreductase subunit 2 (chloroplast) [Glycine
stenophita] gi|514253122|gb|AGO44381.1|
NADH-plastoquinone oxidoreductase subunit 2
(chloroplast) [Glycine stenophita]
Length = 510
Score = 60.5 bits (145), Expect = 5e-07
Identities = 30/46 (65%), Positives = 35/46 (76%)
Frame = +1
Query: 247 LYLIDSTSDEKDIHWFYFIPSITSVMSTSPILF**REEPTNSFSGN 384
L +IDSTSD+KDI WFYFI S + VMS + +LF REEP SFSGN
Sbjct: 45 LLMIDSTSDQKDISWFYFISSTSLVMSITALLFRWREEPMISFSGN 90
>ref|YP_008145386.1| NADH-plastoquinone oxidoreductase subunit 2 (chloroplast) [Glycine
tomentella] gi|520850642|ref|YP_008145402.1|
NADH-plastoquinone oxidoreductase subunit 2
(chloroplast) [Glycine tomentella]
gi|526175935|ref|YP_008145753.1| NADH-plastoquinone
oxidoreductase subunit 2 (chloroplast) [Glycine
cyrtoloba] gi|526175950|ref|YP_008145768.1|
NADH-plastoquinone oxidoreductase subunit 2
(chloroplast) [Glycine cyrtoloba]
gi|526176106|ref|YP_008145916.1| NADH-plastoquinone
oxidoreductase subunit 2 (chloroplast) [Glycine
canescens] gi|526176122|ref|YP_008145932.1|
NADH-plastoquinone oxidoreductase subunit 2
(chloroplast) [Glycine canescens]
gi|526176193|ref|YP_008145998.1| NADH-plastoquinone
oxidoreductase subunit 2 (chloroplast) [Glycine
dolichocarpa] gi|526176209|ref|YP_008146014.1|
NADH-plastoquinone oxidoreductase subunit 2
(chloroplast) [Glycine dolichocarpa]
gi|526176280|ref|YP_008146080.1| NADH-plastoquinone
oxidoreductase subunit 2 (chloroplast) [Glycine falcata]
gi|526176296|ref|YP_008146096.1| NADH-plastoquinone
oxidoreductase subunit 2 (chloroplast) [Glycine falcata]
gi|526176374|ref|YP_008146162.1| NADH-plastoquinone
oxidoreductase subunit 2 (chloroplast) [Glycine
syndetika] gi|526176390|ref|YP_008146178.1|
NADH-plastoquinone oxidoreductase subunit 2
(chloroplast) [Glycine syndetika]
gi|514252941|gb|AGO44202.1| NADH-plastoquinone
oxidoreductase subunit 2 (chloroplast) [Glycine
cyrtoloba] gi|514252956|gb|AGO44217.1|
NADH-plastoquinone oxidoreductase subunit 2
(chloroplast) [Glycine cyrtoloba]
gi|514253023|gb|AGO44283.1| NADH-plastoquinone
oxidoreductase subunit 2 (chloroplast) [Glycine
tomentella] gi|514253039|gb|AGO44299.1|
NADH-plastoquinone oxidoreductase subunit 2
(chloroplast) [Glycine tomentella]
gi|514253189|gb|AGO44447.1| NADH-plastoquinone
oxidoreductase subunit 2 (chloroplast) [Glycine
canescens] gi|514253205|gb|AGO44463.1|
NADH-plastoquinone oxidoreductase subunit 2
(chloroplast) [Glycine canescens]
gi|514253272|gb|AGO44529.1| NADH-plastoquinone
oxidoreductase subunit 2 (chloroplast) [Glycine
dolichocarpa] gi|514253288|gb|AGO44545.1|
NADH-plastoquinone oxidoreductase subunit 2
(chloroplast) [Glycine dolichocarpa]
gi|514253355|gb|AGO44611.1| NADH-plastoquinone
oxidoreductase subunit 2 (chloroplast) [Glycine falcata]
gi|514253371|gb|AGO44627.1| NADH-plastoquinone
oxidoreductase subunit 2 (chloroplast) [Glycine falcata]
gi|514253438|gb|AGO44693.1| NADH-plastoquinone
oxidoreductase subunit 2 (chloroplast) [Glycine
syndetika] gi|514253454|gb|AGO44709.1|
NADH-plastoquinone oxidoreductase subunit 2
(chloroplast) [Glycine syndetika]
gi|514253519|gb|AGO44773.1| NADH-plastoquinone
oxidoreductase subunit 2 (chloroplast) [Glycine
tomentella] gi|514253535|gb|AGO44789.1|
NADH-plastoquinone oxidoreductase subunit 2
(chloroplast) [Glycine tomentella]
gi|514253596|gb|AGO44849.1| NADH-plastoquinone
oxidoreductase subunit 2 (chloroplast) [Glycine
tomentella] gi|514253611|gb|AGO44864.1|
NADH-plastoquinone oxidoreductase subunit 2
(chloroplast) [Glycine tomentella]
Length = 510
Score = 60.5 bits (145), Expect = 5e-07
Identities = 30/46 (65%), Positives = 35/46 (76%)
Frame = +1
Query: 247 LYLIDSTSDEKDIHWFYFIPSITSVMSTSPILF**REEPTNSFSGN 384
L +IDSTSD+KDI WFYFI S + VMS + +LF REEP SFSGN
Sbjct: 45 LLMIDSTSDQKDISWFYFISSTSLVMSITALLFRWREEPMISFSGN 90
>ref|YP_538808.1| NADH dehydrogenase subunit 2 [Glycine max]
gi|91214202|ref|YP_538824.1| NADH dehydrogenase subunit
2 [Glycine max] gi|558604179|ref|YP_008816289.1|
NADH-plastoquinone oxidoreductase subunit 2
(chloroplast) [Glycine soja]
gi|558604195|ref|YP_008816305.1| NADH-plastoquinone
oxidoreductase subunit 2 (chloroplast) [Glycine soja]
gi|288558988|sp|P0CC63.1|NU2C2_SOYBN RecName:
Full=NAD(P)H-quinone oxidoreductase subunit 2 B,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
subunit 2 B; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 2 B
gi|288561981|sp|P0CC62.1|NU2C1_SOYBN RecName:
Full=NAD(P)H-quinone oxidoreductase subunit 2 A,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
subunit 2 A; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 2 A gi|83595785|gb|ABC25166.1|
NADH-plastoquinone oxidoreductase subunit 2 [Glycine
max] gi|83595803|gb|ABC25184.1| NADH-plastoquinone
oxidoreductase subunit 2 [Glycine max]
gi|557469771|gb|AHA04024.1| NADH-plastoquinone
oxidoreductase subunit 2 (chloroplast) [Glycine soja]
gi|557469787|gb|AHA04040.1| NADH-plastoquinone
oxidoreductase subunit 2 (chloroplast) [Glycine soja]
Length = 510
Score = 60.5 bits (145), Expect = 5e-07
Identities = 30/46 (65%), Positives = 35/46 (76%)
Frame = +1
Query: 247 LYLIDSTSDEKDIHWFYFIPSITSVMSTSPILF**REEPTNSFSGN 384
L +IDSTSD+KDI WFYFI S + VMS + +LF REEP SFSGN
Sbjct: 45 LLMIDSTSDQKDISWFYFISSTSLVMSITALLFRWREEPMISFSGN 90
>ref|YP_008082777.1| NADH-plastoquinone oxidoreductase subunit 2 [Prinsepia utilis]
gi|511943733|ref|YP_008082792.1| NADH-plastoquinone
oxidoreductase subunit 2 [Prinsepia utilis]
gi|501418866|gb|AGL94743.1| NADH-plastoquinone
oxidoreductase subunit 2 [Prinsepia utilis]
gi|501418882|gb|AGL94759.1| NADH-plastoquinone
oxidoreductase subunit 2 [Prinsepia utilis]
Length = 510
Score = 60.1 bits (144), Expect = 6e-07
Identities = 30/46 (65%), Positives = 35/46 (76%)
Frame = +1
Query: 247 LYLIDSTSDEKDIHWFYFIPSITSVMSTSPILF**REEPTNSFSGN 384
L +IDSTSD+KDI W YFI S + VMS + +LF REEPT SFSGN
Sbjct: 45 LLMIDSTSDQKDIPWLYFISSTSLVMSITALLFRWREEPTISFSGN 90
>gb|AFU96394.1| NdhB, partial (chloroplast) [Turnera ulmifolia]
Length = 511
Score = 60.1 bits (144), Expect = 6e-07
Identities = 30/46 (65%), Positives = 35/46 (76%)
Frame = +1
Query: 247 LYLIDSTSDEKDIHWFYFIPSITSVMSTSPILF**REEPTNSFSGN 384
L +IDSTSD+KDI WFYFI S + VMS + +LF REEP SFSGN
Sbjct: 44 LLMIDSTSDQKDIPWFYFISSTSLVMSITALLFRWREEPMISFSGN 89
>gb|AFU96382.1| NdhB, partial (chloroplast) [Passiflora ciliata]
Length = 511
Score = 60.1 bits (144), Expect = 6e-07
Identities = 30/46 (65%), Positives = 35/46 (76%)
Frame = +1
Query: 247 LYLIDSTSDEKDIHWFYFIPSITSVMSTSPILF**REEPTNSFSGN 384
L +IDSTSD+KDI WFYFI S + VMS + +LF REEP SFSGN
Sbjct: 44 LLMIDSTSDQKDIPWFYFISSTSLVMSITALLFRWREEPMISFSGN 89
>gb|AFU96381.1| NdhB, partial (chloroplast) [Ouratea sp. CCD-2012]
Length = 512
Score = 60.1 bits (144), Expect = 6e-07
Identities = 30/46 (65%), Positives = 35/46 (76%)
Frame = +1
Query: 247 LYLIDSTSDEKDIHWFYFIPSITSVMSTSPILF**REEPTNSFSGN 384
L +IDSTSD+KDI WFYFI S + VMS + +LF REEP SFSGN
Sbjct: 45 LLMIDSTSDQKDIPWFYFISSTSLVMSITALLFRWREEPMISFSGN 90
>gb|AFU96379.1| NdhB, partial (chloroplast) [Medusagyne oppositifolia]
Length = 511
Score = 60.1 bits (144), Expect = 6e-07
Identities = 30/46 (65%), Positives = 35/46 (76%)
Frame = +1
Query: 247 LYLIDSTSDEKDIHWFYFIPSITSVMSTSPILF**REEPTNSFSGN 384
L +IDSTSD+KDI WFYFI S + VMS + +LF REEP SFSGN
Sbjct: 45 LLMIDSTSDQKDIPWFYFISSTSLVMSITALLFRWREEPMISFSGN 90
>gb|AFU96366.1| NdhB, partial (chloroplast) [Flueggea suffruticosa]
Length = 512
Score = 60.1 bits (144), Expect = 6e-07
Identities = 30/46 (65%), Positives = 35/46 (76%)
Frame = +1
Query: 247 LYLIDSTSDEKDIHWFYFIPSITSVMSTSPILF**REEPTNSFSGN 384
L +IDSTSD+KDI WFYFI S + VMS + +LF REEP SFSGN
Sbjct: 45 LLMIDSTSDQKDIPWFYFISSTSLVMSITALLFRWREEPMISFSGN 90
>gb|AFS35467.1| NADH-plastoquinone oxidoreductase subunit 2, partial [Fragaria
pentaphylla]
Length = 130
Score = 60.1 bits (144), Expect = 6e-07
Identities = 30/46 (65%), Positives = 35/46 (76%)
Frame = +1
Query: 247 LYLIDSTSDEKDIHWFYFIPSITSVMSTSPILF**REEPTNSFSGN 384
L +IDSTSD+KDI W YFI S + VMS + +LF REEPT SFSGN
Sbjct: 8 LLMIDSTSDQKDIPWLYFISSTSLVMSITALLFRWREEPTISFSGN 53
>gb|AFQ39498.1| NADH-plastoquinone oxidoreductase subunit 2 [Fragaria viridis]
Length = 510
Score = 60.1 bits (144), Expect = 6e-07
Identities = 30/46 (65%), Positives = 35/46 (76%)
Frame = +1
Query: 247 LYLIDSTSDEKDIHWFYFIPSITSVMSTSPILF**REEPTNSFSGN 384
L +IDSTSD+KDI W YFI S + VMS + +LF REEPT SFSGN
Sbjct: 45 LLMIDSTSDQKDIPWLYFISSTSLVMSITALLFRWREEPTISFSGN 90
>gb|AFQ39471.1| NADH-plastoquinone oxidoreductase subunit 2 [Fragaria virginiana]
Length = 510
Score = 60.1 bits (144), Expect = 6e-07
Identities = 30/46 (65%), Positives = 35/46 (76%)
Frame = +1
Query: 247 LYLIDSTSDEKDIHWFYFIPSITSVMSTSPILF**REEPTNSFSGN 384
L +IDSTSD+KDI W YFI S + VMS + +LF REEPT SFSGN
Sbjct: 45 LLMIDSTSDQKDIPWLYFISSTSLVMSITALLFRWREEPTISFSGN 90
>ref|YP_004842297.1| NADH-plastoquinone oxidoreductase subunit 2 [Pyrus pyrifolia]
gi|568246790|ref|YP_008965552.1| NADH-plastoquinone
oxidoreductase subunit 2 [Pyrus spinosa]
gi|345433620|dbj|BAK69442.1| NADH-plastoquinone
oxidoreductase subunit 2 [Pyrus pyrifolia]
gi|565666524|emb|CDI73625.1| NADH-plastoquinone
oxidoreductase subunit 2 [Pyrus spinosa]
Length = 510
Score = 60.1 bits (144), Expect = 6e-07
Identities = 30/46 (65%), Positives = 35/46 (76%)
Frame = +1
Query: 247 LYLIDSTSDEKDIHWFYFIPSITSVMSTSPILF**REEPTNSFSGN 384
L +IDSTSD+KDI W YFI S + VMS + +LF REEPT SFSGN
Sbjct: 45 LLMIDSTSDQKDIPWLYFISSTSLVMSITALLFRWREEPTISFSGN 90
>ref|YP_004842282.1| NADH-plastoquinone oxidoreductase subunit 2 [Pyrus pyrifolia]
gi|568246774|ref|YP_008965536.1| NADH-plastoquinone
oxidoreductase subunit 2 [Pyrus spinosa]
gi|345433604|dbj|BAK69426.1| NADH-plastoquinone
oxidoreductase subunit 2 [Pyrus pyrifolia]
gi|565666508|emb|CDI73608.1| NADH-plastoquinone
oxidoreductase subunit 2 [Pyrus spinosa]
Length = 510
Score = 60.1 bits (144), Expect = 6e-07
Identities = 30/46 (65%), Positives = 35/46 (76%)
Frame = +1
Query: 247 LYLIDSTSDEKDIHWFYFIPSITSVMSTSPILF**REEPTNSFSGN 384
L +IDSTSD+KDI W YFI S + VMS + +LF REEPT SFSGN
Sbjct: 45 LLMIDSTSDQKDIPWLYFISSTSLVMSITALLFRWREEPTISFSGN 90
>gb|AEK78284.1| NADH-plastoquinone oxidoreductase subunit 2 [Stegnosperma
halimifolium]
Length = 510
Score = 60.1 bits (144), Expect = 6e-07
Identities = 30/46 (65%), Positives = 35/46 (76%)
Frame = +1
Query: 247 LYLIDSTSDEKDIHWFYFIPSITSVMSTSPILF**REEPTNSFSGN 384
L +IDSTSD+KDI WFYFI S + VMS + +LF REEP SFSGN
Sbjct: 45 LLMIDSTSDQKDIPWFYFISSTSLVMSITALLFRWREEPMISFSGN 90
>gb|AEK78269.1| NADH-plastoquinone oxidoreductase subunit 2 [Rhabdodendron
amazonicum]
Length = 510
Score = 60.1 bits (144), Expect = 6e-07
Identities = 30/46 (65%), Positives = 35/46 (76%)
Frame = +1
Query: 247 LYLIDSTSDEKDIHWFYFIPSITSVMSTSPILF**REEPTNSFSGN 384
L +IDSTSD+KDI WFYFI S + VMS + +LF REEP SFSGN
Sbjct: 45 LLMIDSTSDQKDIPWFYFISSTSLVMSITALLFRWREEPMISFSGN 90
>gb|AEK78261.1| NADH-plastoquinone oxidoreductase subunit 2 [Persicaria virginiana]
Length = 510
Score = 60.1 bits (144), Expect = 6e-07
Identities = 30/46 (65%), Positives = 35/46 (76%)
Frame = +1
Query: 247 LYLIDSTSDEKDIHWFYFIPSITSVMSTSPILF**REEPTNSFSGN 384
L +IDSTSD+KDI WFYFI S + VMS + +LF REEP SFSGN
Sbjct: 45 LLMIDSTSDQKDIPWFYFISSTSLVMSITALLFRWREEPMISFSGN 90
>gb|AEK78229.1| NADH-plastoquinone oxidoreductase subunit 2 [Limonium arborescens]
Length = 510
Score = 60.1 bits (144), Expect = 6e-07
Identities = 30/46 (65%), Positives = 35/46 (76%)
Frame = +1
Query: 247 LYLIDSTSDEKDIHWFYFIPSITSVMSTSPILF**REEPTNSFSGN 384
L +IDSTSD+KDI WFYFI S + VMS + +LF REEP SFSGN
Sbjct: 45 LLMIDSTSDQKDIPWFYFISSTSLVMSITALLFRWREEPMISFSGN 90
>gb|AEK71547.1| NADH-plastoquinone oxidoreductase subunit 2 [Picramnia pentandra]
Length = 500
Score = 60.1 bits (144), Expect = 6e-07
Identities = 30/46 (65%), Positives = 35/46 (76%)
Frame = +1
Query: 247 LYLIDSTSDEKDIHWFYFIPSITSVMSTSPILF**REEPTNSFSGN 384
L +IDSTSD+KDI WFYFI S + VMS + +LF REEP SFSGN
Sbjct: 45 LLMIDSTSDQKDIPWFYFISSTSLVMSITALLFRWREEPIISFSGN 90