BLASTX nr result
ID: Catharanthus23_contig00020883
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus23_contig00020883 (676 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006363206.1| PREDICTED: pentatricopeptide repeat-containi... 216 7e-54 ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containi... 215 9e-54 ref|XP_004295518.1| PREDICTED: pentatricopeptide repeat-containi... 214 2e-53 gb|EMJ25188.1| hypothetical protein PRUPE_ppa014757mg [Prunus pe... 211 2e-52 ref|XP_004233766.1| PREDICTED: pentatricopeptide repeat-containi... 209 6e-52 ref|XP_006448595.1| hypothetical protein CICLE_v10014221mg [Citr... 205 9e-51 ref|XP_006468579.1| PREDICTED: pentatricopeptide repeat-containi... 201 1e-49 ref|XP_002299387.2| pentatricopeptide repeat-containing family p... 199 6e-49 ref|XP_002532711.1| pentatricopeptide repeat-containing protein,... 197 2e-48 gb|EXB83263.1| hypothetical protein L484_011557 [Morus notabilis] 196 7e-48 ref|XP_006290586.1| hypothetical protein CARUB_v10016675mg [Caps... 194 2e-47 ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arab... 194 2e-47 gb|EOX96826.1| Tetratricopeptide repeat (TPR)-like superfamily p... 193 4e-47 ref|XP_006402877.1| hypothetical protein EUTSA_v10005782mg [Eutr... 190 3e-46 ref|NP_191302.2| protein ORGANELLE TRANSCRIPT PROCESSING 84 [Ara... 187 3e-45 gb|AAP40452.1| unknown protein [Arabidopsis thaliana] 187 3e-45 gb|ESW10852.1| hypothetical protein PHAVU_009G243400g [Phaseolus... 175 1e-41 ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago t... 175 1e-41 ref|XP_006597752.1| PREDICTED: pentatricopeptide repeat-containi... 171 1e-40 ref|XP_004487896.1| PREDICTED: pentatricopeptide repeat-containi... 167 4e-39 >ref|XP_006363206.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like [Solanum tuberosum] Length = 889 Score = 216 bits (549), Expect = 7e-54 Identities = 110/203 (54%), Positives = 142/203 (69%), Gaps = 2/203 (0%) Frame = +1 Query: 73 FQSHSP-PLAPAAGPITVTINAVNTINPSKPPSEKRSWIQELRTHTRSNRFQEAISTYAQ 249 F +SP L + P + I P+ SWI LR+ R N F+EAI TY Q Sbjct: 24 FTQNSPRKLLSTSSPTSTLIFKNFQQEPTSETPSAASWIDALRSQVRLNCFKEAIFTYIQ 83 Query: 250 MTAAGIRPDNFAFPAVLKAATGLRDFDVGRQIHGSIVKLGYHRSSVTVANTLLHFYG-IG 426 MT+ G+RPDNF FPAVLKAATGL+D ++G+QI+G++VK GY +SVTVAN+++H G G Sbjct: 84 MTSEGVRPDNFVFPAVLKAATGLQDLNLGKQIYGAVVKFGYDTTSVTVANSVIHLLGRCG 143 Query: 427 GDMNGVLKVFDEMPERDQVSWNSMINALCKFEEWEMAIEAFRLMGLEEIESSSFTLVSMA 606 G ++ V KVFD + +RDQVSWNS+INALCKFE+WE+A+EAFRL+GL+ E+SSFTLVS+A Sbjct: 144 GSIDDVYKVFDRITQRDQVSWNSLINALCKFEKWELALEAFRLIGLDGFEASSFTLVSIA 203 Query: 607 LACSNXXXXXXXXXXXQVHGHSV 675 LACSN QVHGHS+ Sbjct: 204 LACSNLPRTDGLRLGKQVHGHSL 226 Score = 64.7 bits (156), Expect = 2e-08 Identities = 38/151 (25%), Positives = 77/151 (50%), Gaps = 3/151 (1%) Frame = +1 Query: 178 SWIQELRTHTRSNRFQEAISTYAQMTAAGIRPDNFAFPAVLKAATGLRDFD---VGRQIH 348 SW + + +++ A+ + + G +F ++ A + L D +G+Q+H Sbjct: 163 SWNSLINALCKFEKWELALEAFRLIGLDGFEASSFTLVSIALACSNLPRTDGLRLGKQVH 222 Query: 349 GSIVKLGYHRSSVTVANTLLHFYGIGGDMNGVLKVFDEMPERDQVSWNSMINALCKFEEW 528 G +++ R+ N L+ Y G ++ VF+ +RD VSWN++I++ + +++ Sbjct: 223 GHSLRIDDRRTYTN--NALMSMYAKLGRVDDSRAVFELFADRDIVSWNTIISSFSQNDQF 280 Query: 529 EMAIEAFRLMGLEEIESSSFTLVSMALACSN 621 A++ FR+M EEI+ T+ S+ ACS+ Sbjct: 281 REALDCFRVMIQEEIKPDGVTISSVVPACSH 311 Score = 58.9 bits (141), Expect = 1e-06 Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 3/118 (2%) Frame = +1 Query: 181 WIQELRTHTRSNRFQEAISTYAQMTA-AGIRPDNFAFPAVLKAATGLRDFDVGRQIHGSI 357 W L +T++ F EA++ + +M +G+ P+ +V A F + IHG + Sbjct: 369 WNAMLAGYTQNGFFTEALTLFIEMMEFSGLSPNPTTVASVFPACVHCEAFTLKEVIHGYV 428 Query: 358 VKLGYHRSSVTVANTLLHFYGIGGDMNGVLKVFDEMPERDQVSWNSMIN--ALCKFEE 525 +KLG+ V N L+ Y G +N +FD M +D VSWN+MI +C + E Sbjct: 429 IKLGFSDEKY-VQNALMDLYSRMGKINISKYIFDNMESKDIVSWNTMITGFVVCGYHE 485 >ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like [Vitis vinifera] Length = 896 Score = 215 bits (548), Expect = 9e-54 Identities = 112/205 (54%), Positives = 139/205 (67%), Gaps = 6/205 (2%) Frame = +1 Query: 79 SHSPPLAPAAGPITV---TINAVNTINPSKPPSEKRS---WIQELRTHTRSNRFQEAIST 240 SHSPP P ++ T + + + P KP S RS W+ LR+ TRSN F+EAIST Sbjct: 20 SHSPPSLQTQPPPSIQKPTASPLTSKTPPKPTSPSRSTASWVDALRSRTRSNDFREAIST 79 Query: 241 YAQMTAAGIRPDNFAFPAVLKAATGLRDFDVGRQIHGSIVKLGYHRSSVTVANTLLHFYG 420 Y +MT +G RPDNFAFPAVLKA +GL+D G QIH + VK GY SSVTVANTL++ YG Sbjct: 80 YIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYG 139 Query: 421 IGGDMNGVLKVFDEMPERDQVSWNSMINALCKFEEWEMAIEAFRLMGLEEIESSSFTLVS 600 G + V KVFD + +RDQVSWNS I ALC+FE+WE A+EAFR M +E +E SSFTLVS Sbjct: 140 KCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVS 199 Query: 601 MALACSNXXXXXXXXXXXQVHGHSV 675 +ALACSN Q+HG+S+ Sbjct: 200 VALACSNLGVMHGLRLGKQLHGYSL 224 Score = 68.9 bits (167), Expect = 1e-09 Identities = 40/151 (26%), Positives = 76/151 (50%), Gaps = 3/151 (1%) Frame = +1 Query: 178 SWIQELRTHTRSNRFQEAISTYAQMTAAGIRPDNFAFPAVLKAATGL---RDFDVGRQIH 348 SW + R ++++A+ + M + +F +V A + L +G+Q+H Sbjct: 161 SWNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLH 220 Query: 349 GSIVKLGYHRSSVTVANTLLHFYGIGGDMNGVLKVFDEMPERDQVSWNSMINALCKFEEW 528 G +++G ++ N L+ Y G ++ +F+ +RD VSWN+MI++ + + + Sbjct: 221 GYSLRVGDQKTFTN--NALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRF 278 Query: 529 EMAIEAFRLMGLEEIESSSFTLVSMALACSN 621 A+ FRLM LE +E T+ S+ ACS+ Sbjct: 279 SEALAFFRLMVLEGVELDGVTIASVLPACSH 309 >ref|XP_004295518.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like [Fragaria vesca subsp. vesca] Length = 893 Score = 214 bits (545), Expect = 2e-53 Identities = 112/203 (55%), Positives = 133/203 (65%), Gaps = 3/203 (1%) Frame = +1 Query: 76 QSHSPPLAPAAGP---ITVTINAVNTINPSKPPSEKRSWIQELRTHTRSNRFQEAISTYA 246 Q PP P P IT+T T + KP S+ R+WI +RT TRS + EAISTY Sbjct: 23 QIQQPPTTPKTTPPKPITIT----TTTSTPKPISDSRTWIDTIRTQTRSGHYNEAISTYI 78 Query: 247 QMTAAGIRPDNFAFPAVLKAATGLRDFDVGRQIHGSIVKLGYHRSSVTVANTLLHFYGIG 426 MT +GIRPDNFAFPAVLKA L D +G+Q+H +VK GY SVTVAN+L++ YG Sbjct: 79 NMTRSGIRPDNFAFPAVLKAVAALHDLRLGQQVHACVVKFGYESGSVTVANSLVNVYGKC 138 Query: 427 GDMNGVLKVFDEMPERDQVSWNSMINALCKFEEWEMAIEAFRLMGLEEIESSSFTLVSMA 606 GD+ KVFD M ERDQVSWNSMI ALC+FEEWE+A+EAFR M + + SSFTLVS A Sbjct: 139 GDIGDAYKVFDGMTERDQVSWNSMIAALCRFEEWELALEAFRSMFEDNVVPSSFTLVSAA 198 Query: 607 LACSNXXXXXXXXXXXQVHGHSV 675 LACSN QVHG+SV Sbjct: 199 LACSNLDKRDGLRLGKQVHGYSV 221 Score = 67.8 bits (164), Expect = 3e-09 Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 6/154 (3%) Frame = +1 Query: 178 SWIQELRTHTRSNRFQEAISTYAQMTAAGIRPDNFAFPAVLKAATGLRDFD---VGRQIH 348 SW + R ++ A+ + M + P +F + A + L D +G+Q+H Sbjct: 158 SWNSMIAALCRFEEWELALEAFRSMFEDNVVPSSFTLVSAALACSNLDKRDGLRLGKQVH 217 Query: 349 GSIVKLGYHRSSVTVANTLLHFY---GIGGDMNGVLKVFDEMPERDQVSWNSMINALCKF 519 G V++ S N L+ Y G+ G GV ++F+E D VSWN+M+++L + Sbjct: 218 GYSVRMC--ESKTFTVNALMSMYAKLGMVGYSRGVFELFEEC---DLVSWNTMVSSLSQN 272 Query: 520 EEWEMAIEAFRLMGLEEIESSSFTLVSMALACSN 621 + + A+E FRLM LE I T+ S+ ACS+ Sbjct: 273 DRFMEALEFFRLMILEGIRPDGVTIASVLPACSH 306 Score = 61.2 bits (147), Expect = 3e-07 Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 1/147 (0%) Frame = +1 Query: 178 SWIQELRTHTRSNRFQEAISTYAQMTAAGIRPDNFAFPAVLKAATGLRDFDVGRQIHGSI 357 SW + + ++++RF EA+ + M GIRPD +VL A + L + G++IH Sbjct: 261 SWNTMVSSLSQNDRFMEALEFFRLMILEGIRPDGVTIASVLPACSHLEMLEAGKEIHAYA 320 Query: 358 VKLGYHRSSVTVANTLLHFYGIGGDMNGVLKVFDEMPERDQVSWNSMINALCKFEEWEMA 537 ++ + V + L+ Y ++ +VFD + E WN+MI + E E A Sbjct: 321 LRANELTGNSYVGSALVDMYCNCREVESGRRVFDAVMEWKVPLWNAMITGYAQNEYDEEA 380 Query: 538 IEAF-RLMGLEEIESSSFTLVSMALAC 615 ++ F + + + ++ T+ S+ AC Sbjct: 381 LDLFLEMYAVSGLNPNATTMSSIVPAC 407 >gb|EMJ25188.1| hypothetical protein PRUPE_ppa014757mg [Prunus persica] Length = 901 Score = 211 bits (536), Expect = 2e-52 Identities = 110/193 (56%), Positives = 136/193 (70%) Frame = +1 Query: 97 APAAGPITVTINAVNTINPSKPPSEKRSWIQELRTHTRSNRFQEAISTYAQMTAAGIRPD 276 +P T T + ++ S+ P+ SWI+ LR+ TRSN F+EAI TY +MT +GI PD Sbjct: 40 SPILNQPTTTTSPPKLLSHSRTPA---SWIETLRSQTRSNHFREAILTYIEMTLSGIVPD 96 Query: 277 NFAFPAVLKAATGLRDFDVGRQIHGSIVKLGYHRSSVTVANTLLHFYGIGGDMNGVLKVF 456 NFAFPAVLKA T L+D ++G+QIH IVK GY SSVTVANTL++ YG GD+ KVF Sbjct: 97 NFAFPAVLKAVTSLQDLNLGKQIHAHIVKFGYGSSSVTVANTLVNVYGKCGDIGDACKVF 156 Query: 457 DEMPERDQVSWNSMINALCKFEEWEMAIEAFRLMGLEEIESSSFTLVSMALACSNXXXXX 636 D + ERDQVSWNSMI ALC+FEEWE+A+EAFR M +E +E SSFTLVS+ALACSN Sbjct: 157 DGIIERDQVSWNSMIAALCRFEEWELALEAFRSMLMENMEPSSFTLVSVALACSNLHKRD 216 Query: 637 XXXXXXQVHGHSV 675 QVH +SV Sbjct: 217 GLRLGKQVHAYSV 229 Score = 63.9 bits (154), Expect = 4e-08 Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 3/151 (1%) Frame = +1 Query: 178 SWIQELRTHTRSNRFQEAISTYAQMTAAGIRPDNFAFPAVLKAATGLRDFD---VGRQIH 348 SW + R ++ A+ + M + P +F +V A + L D +G+Q+H Sbjct: 166 SWNSMIAALCRFEEWELALEAFRSMLMENMEPSSFTLVSVALACSNLHKRDGLRLGKQVH 225 Query: 349 GSIVKLGYHRSSVTVANTLLHFYGIGGDMNGVLKVFDEMPERDQVSWNSMINALCKFEEW 528 V++ N LL Y G+ +F+ + D VSWN+MI++L + +++ Sbjct: 226 AYSVRMS--ECKTFTINALLAMYSKLGEAEYSRALFELYEDCDMVSWNTMISSLSQNDQF 283 Query: 529 EMAIEAFRLMGLEEIESSSFTLVSMALACSN 621 A+E FRLM L + T+ S+ ACS+ Sbjct: 284 MEALEFFRLMVLAGFKPDGVTVASVLPACSH 314 Score = 57.4 bits (137), Expect = 4e-06 Identities = 37/150 (24%), Positives = 71/150 (47%), Gaps = 4/150 (2%) Frame = +1 Query: 178 SWIQELRTHTRSNRFQEAISTYAQMTAAGIRPDNFAFPAVLKAATGLRDFDVGRQIHGSI 357 SW + + +++++F EA+ + M AG +PD +VL A + L D G++IH Sbjct: 269 SWNTMISSLSQNDQFMEALEFFRLMVLAGFKPDGVTVASVLPACSHLEMLDTGKEIHAYA 328 Query: 358 VKLGYHRSSVTVANTLLHFYGIGGDMNGVLKVFDEMPERDQVSWNSMINALCKFEEWEMA 537 ++ + V + L+ Y ++ +VF+ + ER WN+MI + E + A Sbjct: 329 LRTNELIENSYVGSALVDMYCNCRQVSSGCRVFNAVLERKIALWNAMITGYAQNEYNKEA 388 Query: 538 IEAFRLM----GLEEIESSSFTLVSMALAC 615 + F M GL ++ ++V ++ C Sbjct: 389 LNLFLEMCAASGLSPNSTTMSSIVPASVRC 418 >ref|XP_004233766.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like [Solanum lycopersicum] Length = 889 Score = 209 bits (532), Expect = 6e-52 Identities = 107/203 (52%), Positives = 144/203 (70%), Gaps = 4/203 (1%) Frame = +1 Query: 79 SHSPP---LAPAAGPITVTINAVNTINPSKPPSEKRSWIQELRTHTRSNRFQEAISTYAQ 249 + +PP L+ ++ T+ + S+ PS SWI LR+ R N F+EAI TY Q Sbjct: 25 TQNPPRKLLSTSSPTSTLIFKKFQQEHTSETPSSA-SWIDTLRSQVRLNCFKEAIFTYIQ 83 Query: 250 MTAAGIRPDNFAFPAVLKAATGLRDFDVGRQIHGSIVKLGYHRSSVTVANTLLHFYG-IG 426 MT+ G+RPDNF FPAVLKAATGL+D ++G+QI+G++VK GY SVTV+N+++H G G Sbjct: 84 MTSEGVRPDNFVFPAVLKAATGLQDLNLGKQIYGAVVKFGYDTISVTVSNSVIHLLGRCG 143 Query: 427 GDMNGVLKVFDEMPERDQVSWNSMINALCKFEEWEMAIEAFRLMGLEEIESSSFTLVSMA 606 G ++ V K+FD + +RDQVSWNS+INALCKFE+WE+A+EAFRLMG + E+SSFTLVS+A Sbjct: 144 GSIDDVYKLFDRITQRDQVSWNSLINALCKFEKWELALEAFRLMGFDGFEASSFTLVSIA 203 Query: 607 LACSNXXXXXXXXXXXQVHGHSV 675 LACSN QVHG+S+ Sbjct: 204 LACSNLPRTDGLRLGKQVHGYSL 226 Score = 65.9 bits (159), Expect = 1e-08 Identities = 39/151 (25%), Positives = 78/151 (51%), Gaps = 3/151 (1%) Frame = +1 Query: 178 SWIQELRTHTRSNRFQEAISTYAQMTAAGIRPDNFAFPAVLKAATGLRDFD---VGRQIH 348 SW + + +++ A+ + M G +F ++ A + L D +G+Q+H Sbjct: 163 SWNSLINALCKFEKWELALEAFRLMGFDGFEASSFTLVSIALACSNLPRTDGLRLGKQVH 222 Query: 349 GSIVKLGYHRSSVTVANTLLHFYGIGGDMNGVLKVFDEMPERDQVSWNSMINALCKFEEW 528 G +++ R+ N L+ Y G ++ VF+ +RD VSWN++I++ + +++ Sbjct: 223 GYSLRIDDRRTYTN--NALMSMYAKLGRVDDSRAVFELFADRDIVSWNTIISSFSQNDQF 280 Query: 529 EMAIEAFRLMGLEEIESSSFTLVSMALACSN 621 A+++FR+M EEI+ T+ S+ ACS+ Sbjct: 281 REALDSFRVMIQEEIKPDGVTISSVVPACSH 311 Score = 57.8 bits (138), Expect = 3e-06 Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 3/118 (2%) Frame = +1 Query: 181 WIQELRTHTRSNRFQEAISTYAQMTA-AGIRPDNFAFPAVLKAATGLRDFDVGRQIHGSI 357 W L +T++ F EA+ + +M +G+ P+ +V A F + IHG + Sbjct: 369 WNAMLAGYTQNGFFTEALMLFIEMLEFSGLSPNPTTVASVFPACVHCEAFTLKEVIHGYV 428 Query: 358 VKLGYHRSSVTVANTLLHFYGIGGDMNGVLKVFDEMPERDQVSWNSMIN--ALCKFEE 525 +KLG+ V N L+ Y G +N +FD M +D VSWN+MI +C + E Sbjct: 429 IKLGFADEKY-VQNALMDLYSRMGKINISKYIFDNMESKDIVSWNTMITGFVVCGYHE 485 >ref|XP_006448595.1| hypothetical protein CICLE_v10014221mg [Citrus clementina] gi|557551206|gb|ESR61835.1| hypothetical protein CICLE_v10014221mg [Citrus clementina] Length = 882 Score = 205 bits (522), Expect = 9e-51 Identities = 105/198 (53%), Positives = 134/198 (67%), Gaps = 1/198 (0%) Frame = +1 Query: 85 SPPLAPAAGPITVTINAVNTINPSKPPSEKRSWIQELRTHTRSNRFQEAISTYAQMTAAG 264 SPPL+ A + P K SWI+ LR+ TRSN+F+EAI +Y +MT + Sbjct: 13 SPPLSSLQTHQPPATTATSLPLPGSQTRSKESWIESLRSQTRSNQFREAILSYIEMTRSD 72 Query: 265 IRPDNFAFPAVLKAATGLRDFDVGRQIHGSIVKLGYHRSSVTVANTLLHFYG-IGGDMNG 441 I+PDNFAFPAVLKA G++D +G+QIH +VK GY SSVTVANTL++ YG G DM Sbjct: 73 IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD 132 Query: 442 VLKVFDEMPERDQVSWNSMINALCKFEEWEMAIEAFRLMGLEEIESSSFTLVSMALACSN 621 V KVFD + E+DQVSWNSMI LC+FE+W++A+EAFR+M +E SSFTLVS+ALACSN Sbjct: 133 VYKVFDRITEKDQVSWNSMIATLCRFEKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192 Query: 622 XXXXXXXXXXXQVHGHSV 675 QVHG+S+ Sbjct: 193 LSRRDGLRLGRQVHGNSL 210 Score = 62.8 bits (151), Expect = 9e-08 Identities = 38/151 (25%), Positives = 75/151 (49%), Gaps = 3/151 (1%) Frame = +1 Query: 178 SWIQELRTHTRSNRFQEAISTYAQMTAAGIRPDNFAFPAVLKAATGLRDFD---VGRQIH 348 SW + T R ++ A+ + M + + P +F +V A + L D +GRQ+H Sbjct: 147 SWNSMIATLCRFEKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH 206 Query: 349 GSIVKLGYHRSSVTVANTLLHFYGIGGDMNGVLKVFDEMPERDQVSWNSMINALCKFEEW 528 G+ +++G + + N L+ Y G ++ +F + D VSWN++I++ + +++ Sbjct: 207 GNSLRVG--EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDCDLVSWNTIISSSSQNDKF 264 Query: 529 EMAIEAFRLMGLEEIESSSFTLVSMALACSN 621 A+ R M L I+ ++ S+ ACS+ Sbjct: 265 LEAVMFLRQMALRGIKPDGVSIASVLPACSH 295 Score = 58.5 bits (140), Expect = 2e-06 Identities = 42/169 (24%), Positives = 79/169 (46%), Gaps = 3/169 (1%) Frame = +1 Query: 178 SWIQELRTHTRSNRFQEAISTYAQMTAAGIRPDNFAFPAVLKAATGLRDFDVGRQIHGSI 357 SW + + +++++F EA+ QM GI+PD + +VL A + L D G++IH Sbjct: 250 SWNTIISSSSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA 309 Query: 358 VKLGYHRSSVTVANTLLHFYGIGGDMNGVLKVFDEMPERDQVSWNSMINALCKFEEWEMA 537 ++ + V + L+ Y ++ +VFD + ++ WN+MI + E E A Sbjct: 310 LRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYAQNEYDEEA 369 Query: 538 IEAFRLMGLEEIES---SSFTLVSMALACSNXXXXXXXXXXXQVHGHSV 675 + F + +EE+ ++ TL S+ C +HGH++ Sbjct: 370 LMLF--IKMEEVAGLWPNATTLSSVVPVCVRSEAFPDKEG---IHGHAI 413 >ref|XP_006468579.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like [Citrus sinensis] Length = 882 Score = 201 bits (512), Expect = 1e-49 Identities = 103/198 (52%), Positives = 133/198 (67%), Gaps = 1/198 (0%) Frame = +1 Query: 85 SPPLAPAAGPITVTINAVNTINPSKPPSEKRSWIQELRTHTRSNRFQEAISTYAQMTAAG 264 SPPL+ A + P K SWI+ LR+ TRSN+F+EAI +Y +MT + Sbjct: 13 SPPLSSLQTHQLPATTATSLPLPGSQTRSKESWIESLRSQTRSNQFREAILSYIEMTRSD 72 Query: 265 IRPDNFAFPAVLKAATGLRDFDVGRQIHGSIVKLGYHRSSVTVANTLLHFYG-IGGDMNG 441 I+PDNFAFP+VLKA G++D +G+QIH +VK GY SSVTVANTL++ YG G DM Sbjct: 73 IQPDNFAFPSVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD 132 Query: 442 VLKVFDEMPERDQVSWNSMINALCKFEEWEMAIEAFRLMGLEEIESSSFTLVSMALACSN 621 V KVFD + E+DQVSWNSMI LC+F +W++A+EAFR+M +E SSFTLVS+ALACSN Sbjct: 133 VYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192 Query: 622 XXXXXXXXXXXQVHGHSV 675 QVHG+S+ Sbjct: 193 LSRRDGLRLGRQVHGNSL 210 Score = 67.8 bits (164), Expect = 3e-09 Identities = 39/151 (25%), Positives = 77/151 (50%), Gaps = 3/151 (1%) Frame = +1 Query: 178 SWIQELRTHTRSNRFQEAISTYAQMTAAGIRPDNFAFPAVLKAATGLRDFD---VGRQIH 348 SW + T R ++ A+ + M + + P +F +V A + L D +GRQ+H Sbjct: 147 SWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH 206 Query: 349 GSIVKLGYHRSSVTVANTLLHFYGIGGDMNGVLKVFDEMPERDQVSWNSMINALCKFEEW 528 G+ +++G + + N L+ Y G ++ +F +RD VSWN+++++L + +++ Sbjct: 207 GNSLRVG--EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKF 264 Query: 529 EMAIEAFRLMGLEEIESSSFTLVSMALACSN 621 A+ R M L I+ ++ S+ ACS+ Sbjct: 265 LEAVMFLRQMALRGIKPDGVSIASVLPACSH 295 Score = 57.0 bits (136), Expect = 5e-06 Identities = 42/169 (24%), Positives = 80/169 (47%), Gaps = 3/169 (1%) Frame = +1 Query: 178 SWIQELRTHTRSNRFQEAISTYAQMTAAGIRPDNFAFPAVLKAATGLRDFDVGRQIHGSI 357 SW + + +++++F EA+ QM GI+PD + +VL A + L D G++IH Sbjct: 250 SWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA 309 Query: 358 VKLGYHRSSVTVANTLLHFYGIGGDMNGVLKVFDEMPERDQVSWNSMINALCKFEEWEMA 537 ++ + V + L+ Y ++ +VFD + ++ WN+MI + E E A Sbjct: 310 LRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEA 369 Query: 538 IEAFRLMGLEEIES---SSFTLVSMALACSNXXXXXXXXXXXQVHGHSV 675 + F + +EE+ ++ T+ S+ AC +HGH++ Sbjct: 370 LMLF--IKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG---IHGHAI 413 >ref|XP_002299387.2| pentatricopeptide repeat-containing family protein [Populus trichocarpa] gi|550347073|gb|EEE84192.2| pentatricopeptide repeat-containing family protein [Populus trichocarpa] Length = 894 Score = 199 bits (506), Expect = 6e-49 Identities = 103/202 (50%), Positives = 134/202 (66%), Gaps = 1/202 (0%) Frame = +1 Query: 64 KPPFQSHSPPLAPAAGPITVTINAVNTINPSKPPSEKRSWIQELRTHTRSNRFQEAISTY 243 KPP S SP ++ P ++I+ + SWI+ LR+ +RSN F+EAISTY Sbjct: 30 KPPISSSSPKPISSSSPKPISIS-----------HSQASWIESLRSRSRSNLFREAISTY 78 Query: 244 AQMTAAGIRPDNFAFPAVLKAATGLRDFDVGRQIHGSIVKLGYHR-SSVTVANTLLHFYG 420 +M +G+ PDNFAFPAVLKA G+++ +G+QIH + K GY SSVT+ NTL++ YG Sbjct: 79 IEMIGSGVSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYG 138 Query: 421 IGGDMNGVLKVFDEMPERDQVSWNSMINALCKFEEWEMAIEAFRLMGLEEIESSSFTLVS 600 G + KVFD + ERDQVSWNS+I+ALC+FEEWE+AI+AFRLM +E E SSFTLVS Sbjct: 139 KCGGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVS 198 Query: 601 MALACSNXXXXXXXXXXXQVHG 666 MALACSN Q+HG Sbjct: 199 MALACSNLRKRDGLWLGKQIHG 220 Score = 67.8 bits (164), Expect = 3e-09 Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 3/151 (1%) Frame = +1 Query: 178 SWIQELRTHTRSNRFQEAISTYAQMTAAGIRPDNFAFPAVLKAATGLRDFD---VGRQIH 348 SW + R ++ AI + M G P +F ++ A + LR D +G+QIH Sbjct: 160 SWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLRKRDGLWLGKQIH 219 Query: 349 GSIVKLGYHRSSVTVANTLLHFYGIGGDMNGVLKVFDEMPERDQVSWNSMINALCKFEEW 528 G + G+ R+ N L+ Y G ++ + +RD V+WNSMI++ + E + Sbjct: 220 GCCFRKGHWRTFSN--NALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERF 277 Query: 529 EMAIEAFRLMGLEEIESSSFTLVSMALACSN 621 A+ RLM LE ++ T S+ ACS+ Sbjct: 278 MEALMFLRLMVLEGVKPDGVTFASVLPACSH 308 >ref|XP_002532711.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223527557|gb|EEF29678.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 679 Score = 197 bits (501), Expect = 2e-48 Identities = 99/201 (49%), Positives = 136/201 (67%), Gaps = 3/201 (1%) Frame = +1 Query: 76 QSHSPPLAPAAGPITVTINAVNTINPSKPPSEKRS---WIQELRTHTRSNRFQEAISTYA 246 Q SP L+ +A + + +P KP S+ RS WI+ LR +TRSN F+EAISTY Sbjct: 7 QPFSPILSSSAQTHELPTKKFLSHSPPKPISQSRSQASWIESLRFNTRSNLFREAISTYV 66 Query: 247 QMTAAGIRPDNFAFPAVLKAATGLRDFDVGRQIHGSIVKLGYHRSSVTVANTLLHFYGIG 426 M +G+ PD++AFP VLKA TGL+D ++G+QIH +VK GY SSV +AN+L++FYG Sbjct: 67 DMILSGVSPDSYAFPVVLKAVTGLQDLNLGKQIHAHVVKYGYESSSVAIANSLVNFYGKC 126 Query: 427 GDMNGVLKVFDEMPERDQVSWNSMINALCKFEEWEMAIEAFRLMGLEEIESSSFTLVSMA 606 +++ V KVFD + ERD VSWNS+I+A C+ +EWE+A+EAFR M E++E SSFTLVS Sbjct: 127 SELDDVYKVFDRINERDLVSWNSLISAFCRAQEWELALEAFRFMLAEDLEPSSFTLVSPV 186 Query: 607 LACSNXXXXXXXXXXXQVHGH 669 +ACSN Q+HG+ Sbjct: 187 IACSNLRKHEGLRLGKQIHGY 207 Score = 65.5 bits (158), Expect = 1e-08 Identities = 43/150 (28%), Positives = 76/150 (50%), Gaps = 3/150 (2%) Frame = +1 Query: 178 SWIQELRTHTRSNRFQEAISTYAQMTAAGIRPDNFAFPAVLKAATGLRDFD---VGRQIH 348 SW + R+ ++ A+ + M A + P +F + + A + LR + +G+QIH Sbjct: 146 SWNSLISAFCRAQEWELALEAFRFMLAEDLEPSSFTLVSPVIACSNLRKHEGLRLGKQIH 205 Query: 349 GSIVKLGYHRSSVTVANTLLHFYGIGGDMNGVLKVFDEMPERDQVSWNSMINALCKFEEW 528 G + G H S+ T N L+ Y G ++ +F +R+ +SWN+MI++ + E + Sbjct: 206 GYCFRNG-HWSTFT-NNALMTMYANLGRLDDAKFLFKLFEDRNLISWNTMISSFSQNERF 263 Query: 529 EMAIEAFRLMGLEEIESSSFTLVSMALACS 618 A+ + R M LE ++ TL S+ ACS Sbjct: 264 VEALMSLRYMVLEGVKPDGVTLASVLPACS 293 Score = 58.9 bits (141), Expect = 1e-06 Identities = 35/124 (28%), Positives = 59/124 (47%) Frame = +1 Query: 178 SWIQELRTHTRSNRFQEAISTYAQMTAAGIRPDNFAFPAVLKAATGLRDFDVGRQIHGSI 357 SW + + +++ RF EA+ + M G++PD +VL A + L G++IH Sbjct: 249 SWNTMISSFSQNERFVEALMSLRYMVLEGVKPDGVTLASVLPACSYLEMLGTGKEIHAYA 308 Query: 358 VKLGYHRSSVTVANTLLHFYGIGGDMNGVLKVFDEMPERDQVSWNSMINALCKFEEWEMA 537 ++ G + V + L+ Y G + +VFD + ER WN+MI + E E A Sbjct: 309 LRSGDLIENSFVGSALVDMYCNCGQVGSGRRVFDGILERKTGLWNAMIAGYAQNEHDEKA 368 Query: 538 IEAF 549 + F Sbjct: 369 LMLF 372 Score = 57.0 bits (136), Expect = 5e-06 Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 5/137 (3%) Frame = +1 Query: 226 EAISTYAQMTAAGIRPDNFAFPAVLKAATGLRDFDVGRQIHGSIVKLGYHRSSVTVANTL 405 E I+ + A +P++ VL L G++IH V+ S VTV + L Sbjct: 482 EGINKHDGDKQACFKPNSITLMTVLPGCASLAALAKGKEIHAYAVRNAL-ASEVTVGSAL 540 Query: 406 LHFYGIGGDMNGVLKVFDEMPERDQVSWNSMINALCKFEEWEMAIEAFRLM-----GLEE 570 + Y G +N +VFD+MP ++ ++WN ++ A E A+E F+ M + E Sbjct: 541 VDMYAKCGCLNLSRRVFDQMPIKNVITWNVIVMAYGMHGNGEEALELFKDMVAKGDNVGE 600 Query: 571 IESSSFTLVSMALACSN 621 ++ + T++++ ACS+ Sbjct: 601 VKPTEVTMIAILAACSH 617 >gb|EXB83263.1| hypothetical protein L484_011557 [Morus notabilis] Length = 877 Score = 196 bits (497), Expect = 7e-48 Identities = 108/207 (52%), Positives = 137/207 (66%), Gaps = 8/207 (3%) Frame = +1 Query: 79 SHSPPLAP-AAGPITVTINAVNTINPSKPPSEKR------SWIQELRTHTRSNRFQEAIS 237 S++ PL P AA P++ V S+ S+ + SWI+ LR+ R+N F++A+S Sbjct: 3 SYTHPLYPLAALPVSPQKQVVERQTESRTQSQSQTNNPQSSWIESLRSQVRNNLFRDAVS 62 Query: 238 TYAQMTAAGIRPDNFAFPAVLKAATGLRDFDVGRQIHGSIVKLGYHRSSVTVANTLLHFY 417 TY MT A I PDNFAFP +LKAAT LRD +GRQIH + K GY SSVTVANTL++ Y Sbjct: 63 TYTSMTMA-IPPDNFAFPPILKAATSLRDLSLGRQIHAHVFKFGYASSSVTVANTLVNMY 121 Query: 418 GIGGDMNGVLKVFDEMPERDQVSWNSMINALCKFEEWEMAIEAFRLMGLEE-IESSSFTL 594 G GD+ KVFD +P+RDQVSWNSMI ALC F EW +A+EAFR M EE ++ SSFTL Sbjct: 122 GKCGDIGDAHKVFDRIPQRDQVSWNSMIAALCHFGEWALALEAFRAMLAEENVDPSSFTL 181 Query: 595 VSMALACSNXXXXXXXXXXXQVHGHSV 675 VS++LACSN QVHG+S+ Sbjct: 182 VSVSLACSNLERFYGLWLGKQVHGYSL 208 >ref|XP_006290586.1| hypothetical protein CARUB_v10016675mg [Capsella rubella] gi|482559293|gb|EOA23484.1| hypothetical protein CARUB_v10016675mg [Capsella rubella] Length = 882 Score = 194 bits (494), Expect = 2e-47 Identities = 105/205 (51%), Positives = 134/205 (65%), Gaps = 3/205 (1%) Frame = +1 Query: 70 PFQSHSPPLAPAAGPITVTINAVNTINPSKPPSEKRS---WIQELRTHTRSNRFQEAIST 240 PF H+PP A + TI AV+ + PSK S+ RS WI LR+ R++ +EA+ T Sbjct: 19 PFSRHNPPYLLRATSTSATI-AVDGV-PSKLISQSRSPEWWIDSLRSKVRASLLREAVLT 76 Query: 241 YAQMTAAGIRPDNFAFPAVLKAATGLRDFDVGRQIHGSIVKLGYHRSSVTVANTLLHFYG 420 Y M GI+PD FAFPA+LKA L+D D+G+QIH + K GY SVTVANTL++ Y Sbjct: 77 YIDMIVLGIKPDKFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYR 136 Query: 421 IGGDMNGVLKVFDEMPERDQVSWNSMINALCKFEEWEMAIEAFRLMGLEEIESSSFTLVS 600 GD V KVFD + ER+QVSWNS+I++LC FE+WEMA+EAFR M E +E SSFTLVS Sbjct: 137 KCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVS 196 Query: 601 MALACSNXXXXXXXXXXXQVHGHSV 675 +ALACSN QVH +S+ Sbjct: 197 VALACSNVPMPEGLRLGKQVHAYSL 221 Score = 63.2 bits (152), Expect = 7e-08 Identities = 38/151 (25%), Positives = 74/151 (49%), Gaps = 3/151 (1%) Frame = +1 Query: 178 SWIQELRTHTRSNRFQEAISTYAQMTAAGIRPDNFAFPAVLKAATGL---RDFDVGRQIH 348 SW + + +++ A+ + M + P +F +V A + + +G+Q+H Sbjct: 158 SWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVALACSNVPMPEGLRLGKQVH 217 Query: 349 GSIVKLGYHRSSVTVANTLLHFYGIGGDMNGVLKVFDEMPERDQVSWNSMINALCKFEEW 528 ++ G S + NTL+ YG G + + RD V+WN+++++LC+ E++ Sbjct: 218 AYSLRKGELNSFII--NTLVAMYGKLGKLASSKSLLGSFEGRDLVTWNTLLSSLCQNEQF 275 Query: 529 EMAIEAFRLMGLEEIESSSFTLVSMALACSN 621 A+E R M L+ +E FT+ S+ CS+ Sbjct: 276 LEALEYLREMVLKGVEPDGFTISSVLPVCSH 306 Score = 57.0 bits (136), Expect = 5e-06 Identities = 31/120 (25%), Positives = 62/120 (51%) Frame = +1 Query: 262 GIRPDNFAFPAVLKAATGLRDFDVGRQIHGSIVKLGYHRSSVTVANTLLHFYGIGGDMNG 441 G++P++ +L + L G++IH +K + V V + ++ Y G ++ Sbjct: 504 GLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNL-ATDVAVGSAIVDMYAKCGCLHM 562 Query: 442 VLKVFDEMPERDQVSWNSMINALCKFEEWEMAIEAFRLMGLEEIESSSFTLVSMALACSN 621 KVFD++P R+ ++WN +I A + AI+ R+M ++ + + T +S+ ACS+ Sbjct: 563 SRKVFDQIPFRNVITWNVIIMAYGMHGNGQDAIDLLRMMMVQGAKPNEVTFISVFAACSH 622 >ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp. lyrata] gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp. lyrata] Length = 886 Score = 194 bits (493), Expect = 2e-47 Identities = 104/207 (50%), Positives = 132/207 (63%), Gaps = 5/207 (2%) Frame = +1 Query: 70 PFQSHSPPLAPAAGPITVTINAVNTIN--PSKPPSEKRS---WIQELRTHTRSNRFQEAI 234 PF P A P +VT + +T+ PSK S+ S WI LR+ RSN +EA+ Sbjct: 19 PFSRQKHPYLLRATPTSVTDDVASTVYGAPSKFISQSHSPEWWIDLLRSKVRSNLLREAV 78 Query: 235 STYAQMTAAGIRPDNFAFPAVLKAATGLRDFDVGRQIHGSIVKLGYHRSSVTVANTLLHF 414 TY M GI+PDNFAFPA+LKA L+D D+G+QIH + K GY SVTVANTL++ Sbjct: 79 LTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNL 138 Query: 415 YGIGGDMNGVLKVFDEMPERDQVSWNSMINALCKFEEWEMAIEAFRLMGLEEIESSSFTL 594 Y GD V KVFD + ER+QVSWNS+I++LC FE+WEMA+EAFR M E++E SSFTL Sbjct: 139 YRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTL 198 Query: 595 VSMALACSNXXXXXXXXXXXQVHGHSV 675 VS+ALACSN QVH + + Sbjct: 199 VSVALACSNFPMPEGLLMGKQVHAYGL 225 Score = 63.2 bits (152), Expect = 7e-08 Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 3/151 (1%) Frame = +1 Query: 178 SWIQELRTHTRSNRFQEAISTYAQMTAAGIRPDNFAFPAVLKAATGL---RDFDVGRQIH 348 SW + + +++ A+ + M + P +F +V A + +G+Q+H Sbjct: 162 SWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVH 221 Query: 349 GSIVKLGYHRSSVTVANTLLHFYGIGGDMNGVLKVFDEMPERDQVSWNSMINALCKFEEW 528 ++ G S + NTL+ YG G + + RD V+WN+++++LC+ E++ Sbjct: 222 AYGLRKGELNSFII--NTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQF 279 Query: 529 EMAIEAFRLMGLEEIESSSFTLVSMALACSN 621 A+E R M LE +E FT+ S+ ACS+ Sbjct: 280 LEALEYLREMVLEGVEPDGFTISSVLPACSH 310 >gb|EOX96826.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma cacao] Length = 955 Score = 193 bits (491), Expect = 4e-47 Identities = 106/207 (51%), Positives = 138/207 (66%), Gaps = 8/207 (3%) Frame = +1 Query: 79 SHSPPLAPAA-GPITVTINAVNTINPSKPPSEKRS-----WIQELRTHTRSNRFQEAIST 240 SHSP L +A P I ++ T P P++ RS W + LR++TRSNRF +AI T Sbjct: 81 SHSPVLPSSAIAPPPTPIPSIQTHQPI--PTKTRSLSQGSWTESLRSNTRSNRFHQAILT 138 Query: 241 YAQMTAAGIRPDNFAFPAVLKAATGLRDFDVGRQIHGSIVKLGYH--RSSVTVANTLLHF 414 Y M+++GI PD+FAFPAVLKA T L D +G+QIH ++K GY SSVTVANTL++F Sbjct: 139 YVSMSSSGIPPDHFAFPAVLKAVTALHDLALGKQIHAQVLKFGYGFGTSSVTVANTLVNF 198 Query: 415 YGIGGDMNGVLKVFDEMPERDQVSWNSMINALCKFEEWEMAIEAFRLMGLEEIESSSFTL 594 YG GD+ V KVFD + +RD VSWNS I+A C+ E+WE A+EAFRLM L+ +E SSFTL Sbjct: 199 YGKCGDIWDVYKVFDRIHQRDTVSWNSFISAFCRLEDWEAALEAFRLMLLDNVEPSSFTL 258 Query: 595 VSMALACSNXXXXXXXXXXXQVHGHSV 675 VS+A ACSN Q+H +S+ Sbjct: 259 VSIAHACSNLPSRDGLHLGKQLHAYSL 285 Score = 63.5 bits (153), Expect = 6e-08 Identities = 37/151 (24%), Positives = 73/151 (48%), Gaps = 3/151 (1%) Frame = +1 Query: 178 SWIQELRTHTRSNRFQEAISTYAQMTAAGIRPDNFAFPAVLKAATGLRDFD---VGRQIH 348 SW + R ++ A+ + M + P +F ++ A + L D +G+Q+H Sbjct: 222 SWNSFISAFCRLEDWEAALEAFRLMLLDNVEPSSFTLVSIAHACSNLPSRDGLHLGKQLH 281 Query: 349 GSIVKLGYHRSSVTVANTLLHFYGIGGDMNGVLKVFDEMPERDQVSWNSMINALCKFEEW 528 +++G + N L+ Y G +N +F+ ERD +SWN+M+++L + +++ Sbjct: 282 AYSLRIG--DAKTFTYNALMTMYSKLGHLNDAKLLFELFKERDLISWNTMLSSLSQNDKF 339 Query: 529 EMAIEAFRLMGLEEIESSSFTLVSMALACSN 621 A+ M LE ++ T+ S+ ACS+ Sbjct: 340 TEALLLLHRMVLEGLKPDGVTIASVLPACSH 370 >ref|XP_006402877.1| hypothetical protein EUTSA_v10005782mg [Eutrema salsugineum] gi|557103976|gb|ESQ44330.1| hypothetical protein EUTSA_v10005782mg [Eutrema salsugineum] Length = 888 Score = 190 bits (483), Expect = 3e-46 Identities = 100/203 (49%), Positives = 124/203 (61%), Gaps = 5/203 (2%) Frame = +1 Query: 82 HSPPLAPAAGPITVTINAVNTINPSKPPSEKRS-----WIQELRTHTRSNRFQEAISTYA 246 H P A P + I+ S RS WI LR+ RSN +EA+ TY Sbjct: 25 HKPLYLLRATPTSAAAEVTGAIDGSSSKLVSRSRSTEWWIDSLRSKVRSNLLREAVFTYI 84 Query: 247 QMTAAGIRPDNFAFPAVLKAATGLRDFDVGRQIHGSIVKLGYHRSSVTVANTLLHFYGIG 426 M GI+PDNF FPA+LKA L+D D+G+QIH + K GY SVTVANTL++FY Sbjct: 85 DMVLLGIKPDNFVFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNFYRKC 144 Query: 427 GDMNGVLKVFDEMPERDQVSWNSMINALCKFEEWEMAIEAFRLMGLEEIESSSFTLVSMA 606 GD V KVFD + ER+QVSWNSMI++LC FE+WEMA+EAFR M E +E SSFTLVS+A Sbjct: 145 GDFGAVYKVFDRISERNQVSWNSMISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVA 204 Query: 607 LACSNXXXXXXXXXXXQVHGHSV 675 +ACSN QVH +S+ Sbjct: 205 IACSNLPIPEGLMMGKQVHAYSL 227 Score = 61.2 bits (147), Expect = 3e-07 Identities = 32/124 (25%), Positives = 67/124 (54%) Frame = +1 Query: 250 MTAAGIRPDNFAFPAVLKAATGLRDFDVGRQIHGSIVKLGYHRSSVTVANTLLHFYGIGG 429 ++ G++P++ +L + L G++IH +K + V V + L+ Y G Sbjct: 506 VSRVGLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNL-ATDVAVGSALVDMYAKCG 564 Query: 430 DMNGVLKVFDEMPERDQVSWNSMINALCKFEEWEMAIEAFRLMGLEEIESSSFTLVSMAL 609 ++ KVFD++P ++ ++WN +I A + AIE ++M +++++ + TL+S+ Sbjct: 565 CLHMSRKVFDQIPIKNVITWNVIIMAYGMHGNGQDAIELLKMMMVQKVKPNEVTLISVFA 624 Query: 610 ACSN 621 ACS+ Sbjct: 625 ACSH 628 Score = 59.7 bits (143), Expect = 8e-07 Identities = 38/151 (25%), Positives = 74/151 (49%), Gaps = 3/151 (1%) Frame = +1 Query: 178 SWIQELRTHTRSNRFQEAISTYAQMTAAGIRPDNFAFPAVLKAATGL---RDFDVGRQIH 348 SW + + +++ A+ + M + P +F +V A + L +G+Q+H Sbjct: 164 SWNSMISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVAIACSNLPIPEGLMMGKQVH 223 Query: 349 GSIVKLGYHRSSVTVANTLLHFYGIGGDMNGVLKVFDEMPERDQVSWNSMINALCKFEEW 528 ++ G S + NTL+ YG G + + R+ V+WN+++++LC+ E++ Sbjct: 224 AYSLRKGDLNSFII--NTLVAMYGKLGKLASSKILLGTFEGRNLVTWNTVLSSLCQNEQF 281 Query: 529 EMAIEAFRLMGLEEIESSSFTLVSMALACSN 621 A+E R M L+ +E FT+ S+ CS+ Sbjct: 282 LEALEYLREMVLKGVEPDGFTISSVLPVCSH 312 >ref|NP_191302.2| protein ORGANELLE TRANSCRIPT PROCESSING 84 [Arabidopsis thaliana] gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g57430, chloroplastic; Flags: Precursor gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 890 Score = 187 bits (475), Expect = 3e-45 Identities = 99/207 (47%), Positives = 129/207 (62%), Gaps = 5/207 (2%) Frame = +1 Query: 70 PFQSHSPPLAPAAGPITVTINAVNTIN--PSKPPSEKRS---WIQELRTHTRSNRFQEAI 234 PF H P A P + T + + ++ PS S+ RS WI LR+ RSN +EA+ Sbjct: 23 PFSRHKHPYLLRATPTSATEDVASAVSGAPSIFISQSRSPEWWIDLLRSKVRSNLLREAV 82 Query: 235 STYAQMTAAGIRPDNFAFPAVLKAATGLRDFDVGRQIHGSIVKLGYHRSSVTVANTLLHF 414 TY M GI+PDN+AFPA+LKA L+D ++G+QIH + K GY SVTVANTL++ Sbjct: 83 LTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNL 142 Query: 415 YGIGGDMNGVLKVFDEMPERDQVSWNSMINALCKFEEWEMAIEAFRLMGLEEIESSSFTL 594 Y GD V KVFD + ER+QVSWNS+I++LC FE+WEMA+EAFR M E +E SSFTL Sbjct: 143 YRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTL 202 Query: 595 VSMALACSNXXXXXXXXXXXQVHGHSV 675 VS+ ACSN QVH + + Sbjct: 203 VSVVTACSNLPMPEGLMMGKQVHAYGL 229 Score = 64.7 bits (156), Expect = 2e-08 Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 3/151 (1%) Frame = +1 Query: 178 SWIQELRTHTRSNRFQEAISTYAQMTAAGIRPDNFAFPAVLKAATGL---RDFDVGRQIH 348 SW + + +++ A+ + M + P +F +V+ A + L +G+Q+H Sbjct: 166 SWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVH 225 Query: 349 GSIVKLGYHRSSVTVANTLLHFYGIGGDMNGVLKVFDEMPERDQVSWNSMINALCKFEEW 528 ++ G S + NTL+ YG G + + RD V+WN+++++LC+ E+ Sbjct: 226 AYGLRKGELNSFII--NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQL 283 Query: 529 EMAIEAFRLMGLEEIESSSFTLVSMALACSN 621 A+E R M LE +E FT+ S+ ACS+ Sbjct: 284 LEALEYLREMVLEGVEPDEFTISSVLPACSH 314 Score = 57.8 bits (138), Expect = 3e-06 Identities = 30/119 (25%), Positives = 62/119 (52%) Frame = +1 Query: 265 IRPDNFAFPAVLKAATGLRDFDVGRQIHGSIVKLGYHRSSVTVANTLLHFYGIGGDMNGV 444 ++P++ +L + L G++IH +K + V V + L+ Y G + Sbjct: 513 LKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNL-ATDVAVGSALVDMYAKCGCLQMS 571 Query: 445 LKVFDEMPERDQVSWNSMINALCKFEEWEMAIEAFRLMGLEEIESSSFTLVSMALACSN 621 KVFD++P+++ ++WN +I A + AI+ R+M ++ ++ + T +S+ ACS+ Sbjct: 572 RKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSH 630 >gb|AAP40452.1| unknown protein [Arabidopsis thaliana] Length = 890 Score = 187 bits (475), Expect = 3e-45 Identities = 99/207 (47%), Positives = 129/207 (62%), Gaps = 5/207 (2%) Frame = +1 Query: 70 PFQSHSPPLAPAAGPITVTINAVNTIN--PSKPPSEKRS---WIQELRTHTRSNRFQEAI 234 PF H P A P + T + + ++ PS S+ RS WI LR+ RSN +EA+ Sbjct: 23 PFSRHKHPYLLRATPTSATEDVASAVSGAPSIFISQSRSPEWWIDLLRSKVRSNLLREAV 82 Query: 235 STYAQMTAAGIRPDNFAFPAVLKAATGLRDFDVGRQIHGSIVKLGYHRSSVTVANTLLHF 414 TY M GI+PDN+AFPA+LKA L+D ++G+QIH + K GY SVTVANTL++ Sbjct: 83 LTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNL 142 Query: 415 YGIGGDMNGVLKVFDEMPERDQVSWNSMINALCKFEEWEMAIEAFRLMGLEEIESSSFTL 594 Y GD V KVFD + ER+QVSWNS+I++LC FE+WEMA+EAFR M E +E SSFTL Sbjct: 143 YRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTL 202 Query: 595 VSMALACSNXXXXXXXXXXXQVHGHSV 675 VS+ ACSN QVH + + Sbjct: 203 VSVVTACSNLPMPEGLMMGKQVHAYGL 229 Score = 64.7 bits (156), Expect = 2e-08 Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 3/151 (1%) Frame = +1 Query: 178 SWIQELRTHTRSNRFQEAISTYAQMTAAGIRPDNFAFPAVLKAATGL---RDFDVGRQIH 348 SW + + +++ A+ + M + P +F +V+ A + L +G+Q+H Sbjct: 166 SWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVH 225 Query: 349 GSIVKLGYHRSSVTVANTLLHFYGIGGDMNGVLKVFDEMPERDQVSWNSMINALCKFEEW 528 ++ G S + NTL+ YG G + + RD V+WN+++++LC+ E+ Sbjct: 226 AYGLRKGELNSFII--NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQL 283 Query: 529 EMAIEAFRLMGLEEIESSSFTLVSMALACSN 621 A+E R M LE +E FT+ S+ ACS+ Sbjct: 284 LEALEYLREMVLEGVEPDEFTISSVLPACSH 314 Score = 57.8 bits (138), Expect = 3e-06 Identities = 30/119 (25%), Positives = 62/119 (52%) Frame = +1 Query: 265 IRPDNFAFPAVLKAATGLRDFDVGRQIHGSIVKLGYHRSSVTVANTLLHFYGIGGDMNGV 444 ++P++ +L + L G++IH +K + V V + L+ Y G + Sbjct: 513 LKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNL-ATDVAVGSALVDMYAKCGCLQMS 571 Query: 445 LKVFDEMPERDQVSWNSMINALCKFEEWEMAIEAFRLMGLEEIESSSFTLVSMALACSN 621 KVFD++P+++ ++WN +I A + AI+ R+M ++ ++ + T +S+ ACS+ Sbjct: 572 RKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSH 630 >gb|ESW10852.1| hypothetical protein PHAVU_009G243400g [Phaseolus vulgaris] Length = 882 Score = 175 bits (444), Expect = 1e-41 Identities = 92/170 (54%), Positives = 116/170 (68%), Gaps = 3/170 (1%) Frame = +1 Query: 118 TVTINAVNTINPSKPPSEKRS---WIQELRTHTRSNRFQEAISTYAQMTAAGIRPDNFAF 288 T+TI P E+RS WI LR+ T+S+ F++AI+TYA M AA PDNFAF Sbjct: 24 TLTIPTPKHSPPPTAAVERRSPSQWIDLLRSQTQSSSFRDAIATYAAMLAAAAAPDNFAF 83 Query: 289 PAVLKAATGLRDFDVGRQIHGSIVKLGYHRSSVTVANTLLHFYGIGGDMNGVLKVFDEMP 468 PAVLKAAT + D +G+Q+H + K G SV VANTLL+ YG GD+ ++FDE+P Sbjct: 84 PAVLKAATAVHDLSLGKQLHAHVFKFG-QAPSVAVANTLLNMYGKCGDLAAARRLFDEIP 142 Query: 469 ERDQVSWNSMINALCKFEEWEMAIEAFRLMGLEEIESSSFTLVSMALACS 618 ERD VSWNSMI LC+FEEWE+++ FRLM E +E SSFTLVS+A ACS Sbjct: 143 ERDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVEPSSFTLVSVAHACS 192 Score = 60.5 bits (145), Expect = 5e-07 Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 1/154 (0%) Frame = +1 Query: 160 PPSEKRSWIQELRTHTRSNRFQEAISTYAQMTAAGIRPDNFAFPAVLKAATGLRDFD-VG 336 P + SW + T R ++ ++ + M + + P +F +V A + LR +G Sbjct: 142 PERDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVEPSSFTLVSVAHACSYLRGGTRLG 201 Query: 337 RQIHGSIVKLGYHRSSVTVANTLLHFYGIGGDMNGVLKVFDEMPERDQVSWNSMINALCK 516 +Q+H ++ R+ N L+ Y G +N +FD +D VSWN++I++L + Sbjct: 202 KQVHAFTLRNDDLRTYTN--NALVSMYARLGRVNDAKALFDVFDGKDIVSWNTVISSLSQ 259 Query: 517 FEEWEMAIEAFRLMGLEEIESSSFTLVSMALACS 618 + +E A+ LM ++ + TL S+ ACS Sbjct: 260 NDRFEEALMYMYLMIVDGVRPDGVTLASVLPACS 293 >ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula] gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula] Length = 874 Score = 175 bits (443), Expect = 1e-41 Identities = 91/185 (49%), Positives = 121/185 (65%), Gaps = 1/185 (0%) Frame = +1 Query: 70 PFQSHSPPLAPAAGPITVTINAVNTINPSKPPSEKRSWIQELRTHTRSNR-FQEAISTYA 246 P + HSPP + +A T T P + PSE W+ LR+ T+S+ F +AISTY Sbjct: 19 PNKHHSPPTSSSAITTTTTTTTTVAAEP-RLPSE---WVSHLRSQTQSSSTFHQAISTYT 74 Query: 247 QMTAAGIRPDNFAFPAVLKAATGLRDFDVGRQIHGSIVKLGYHRSSVTVANTLLHFYGIG 426 M AG+ PDNFAFPAVLKA G++D ++G+Q+H + K G V N+L++ YG Sbjct: 75 NMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFG-QALPTAVPNSLVNMYGKC 133 Query: 427 GDMNGVLKVFDEMPERDQVSWNSMINALCKFEEWEMAIEAFRLMGLEEIESSSFTLVSMA 606 GD++ +VFDE+ RD VSWNSMINA C+FEEWE+A+ FRLM LE + +SFTLVS+A Sbjct: 134 GDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVA 193 Query: 607 LACSN 621 ACSN Sbjct: 194 HACSN 198 Score = 57.8 bits (138), Expect = 3e-06 Identities = 37/149 (24%), Positives = 71/149 (47%), Gaps = 1/149 (0%) Frame = +1 Query: 178 SWIQELRTHTRSNRFQEAISTYAQMTAAGIRPDNFAFPAVLKAATGL-RDFDVGRQIHGS 354 SW + R ++ A+ + M + P +F +V A + L +G+Q+H Sbjct: 153 SWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAF 212 Query: 355 IVKLGYHRSSVTVANTLLHFYGIGGDMNGVLKVFDEMPERDQVSWNSMINALCKFEEWEM 534 +++ G R+ N L+ Y G + +FD ++D VSWN++I++L + + +E Sbjct: 213 VLRNGDWRTFTN--NALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEE 270 Query: 535 AIEAFRLMGLEEIESSSFTLVSMALACSN 621 A+ +M + + TL S+ ACS+ Sbjct: 271 ALLYLHVMLQSGVRPNGVTLASVLPACSH 299 >ref|XP_006597752.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like [Glycine max] Length = 880 Score = 171 bits (434), Expect = 1e-40 Identities = 91/176 (51%), Positives = 123/176 (69%), Gaps = 6/176 (3%) Frame = +1 Query: 112 PITVTINAVNTINPSKPPS--EKRS---WIQELRTHTRSNRFQEAISTYAQMTAAGIRPD 276 P+T+T+ P+ PP+ E+RS WI LR+ T S+ F++AISTYA M AA PD Sbjct: 22 PLTLTL-------PTPPPTTVERRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPD 74 Query: 277 NFAFPAVLKAATGLRDFDVGRQIHGSIVKLGYHR-SSVTVANTLLHFYGIGGDMNGVLKV 453 NFAFPAVLKAA + D +G+QIH + K G+ SSV VAN+L++ YG GD+ +V Sbjct: 75 NFAFPAVLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQV 134 Query: 454 FDEMPERDQVSWNSMINALCKFEEWEMAIEAFRLMGLEEIESSSFTLVSMALACSN 621 FD++P+RD VSWNSMI LC+FEEWE+++ FRLM E ++ +SFTLVS+A ACS+ Sbjct: 135 FDDIPDRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSH 190 Score = 56.2 bits (134), Expect = 9e-06 Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 6/124 (4%) Frame = +1 Query: 268 RPDNFAFPAVLKAATGLRDFDVGRQIHGSIVKLGYHRSSVTVANTLLHFYGIGGDMNGVL 447 +P++ VL L G++IH VK V V + L+ Y G +N Sbjct: 498 KPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKL-AMDVAVGSALVDMYAKCGCLNLAS 556 Query: 448 KVFDEMPERDQVSWNSMINALCKFEEWEMAIEAFRLM------GLEEIESSSFTLVSMAL 609 +VFD+MP R+ ++WN +I A + E A+E FR+M E I + T +++ Sbjct: 557 RVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFA 616 Query: 610 ACSN 621 ACS+ Sbjct: 617 ACSH 620 >ref|XP_004487896.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like isoform X1 [Cicer arietinum] gi|502085351|ref|XP_004487897.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like isoform X2 [Cicer arietinum] Length = 872 Score = 167 bits (422), Expect = 4e-39 Identities = 82/158 (51%), Positives = 108/158 (68%), Gaps = 2/158 (1%) Frame = +1 Query: 154 SKPPSEKRSWIQELRTHTRSNRFQEAISTYAQMTAAGIRPDNFAFPAVLKAATGLRDFDV 333 S P +WI LR+ +S+ F +AISTY M AG+ PDNFAFPAVLKA +D ++ Sbjct: 26 SAEPHSPSAWIDRLRSQVQSSSFHQAISTYTNMVTAGVPPDNFAFPAVLKATAATQDLNL 85 Query: 334 GRQIHGSIVKLGYH--RSSVTVANTLLHFYGIGGDMNGVLKVFDEMPERDQVSWNSMINA 507 G+QIHG + K G S+ VAN+L++ YG GD++ +VFDE+ RD VSWNSMI A Sbjct: 86 GKQIHGHVFKFGQALPSSAAAVANSLVNMYGKCGDIDDARRVFDEISHRDDVSWNSMIAA 145 Query: 508 LCKFEEWEMAIEAFRLMGLEEIESSSFTLVSMALACSN 621 C+FE+WE++I FRLM LE + +SFTLVS+A ACSN Sbjct: 146 ACRFEKWELSIHLFRLMLLEHVGPTSFTLVSVAHACSN 183