BLASTX nr result

ID: Catharanthus23_contig00020766 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00020766
         (1080 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006352669.1| PREDICTED: pentatricopeptide repeat-containi...    60   1e-06
ref|XP_004242426.1| PREDICTED: pentatricopeptide repeat-containi...    60   1e-06

>ref|XP_006352669.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
            mitochondrial-like [Solanum tuberosum]
          Length = 379

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 26/40 (65%), Positives = 34/40 (85%)
 Frame = -3

Query: 1078 RDGRGDDAFDLLQEMRKKDSFMNEKTYSALLNALHFLRQD 959
            R+GRGD AF+LL+E +K+DS MNEKTY +LLN L+FL +D
Sbjct: 340  REGRGDYAFELLEEFKKRDSLMNEKTYKSLLNTLYFLNKD 379


>ref|XP_004242426.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
            mitochondrial-like [Solanum lycopersicum]
          Length = 403

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 26/40 (65%), Positives = 34/40 (85%)
 Frame = -3

Query: 1078 RDGRGDDAFDLLQEMRKKDSFMNEKTYSALLNALHFLRQD 959
            R+GRGD AF+LL+E +K+DS MNEKTY +LLN L+FL +D
Sbjct: 364  REGRGDYAFELLEEFKKRDSLMNEKTYKSLLNTLYFLNKD 403


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