BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00020737
         (749 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006402858.1| hypothetical protein EUTSA_v10005738mg [Eutr...    67   6e-09
ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Caps...    64   5e-08
ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub...    64   7e-08
ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub...    59   2e-06
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...    59   2e-06
gb|EOY09356.1| Nuclear RNA polymerase A1, putative isoform 2 [Th...    58   4e-06
gb|EOY09355.1| Nuclear RNA polymerase A1, putative isoform 1 [Th...    58   4e-06
ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I sub...    57   5e-06

>ref|XP_006402858.1| hypothetical protein EUTSA_v10005738mg [Eutrema salsugineum]
           gi|557103957|gb|ESQ44311.1| hypothetical protein
           EUTSA_v10005738mg [Eutrema salsugineum]
          Length = 1697

 Score = 67.0 bits (162), Expect = 6e-09
 Identities = 30/46 (65%), Positives = 39/46 (84%)
 Frame = +2

Query: 611 LKMAQTTEGVSEAVEKVSFSFMTDEEVRRHSVVKITNPVLLDSVDR 748
           +  AQT EG S+ VE V FSFMT+E+VR+HSV+K+TNPVLLD+V+R
Sbjct: 1   MAQAQTIEGASQVVESVRFSFMTEEDVRKHSVMKVTNPVLLDNVER 46


>ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Capsella rubella]
           gi|482559195|gb|EOA23386.1| hypothetical protein
           CARUB_v10016563mg [Capsella rubella]
          Length = 1651

 Score = 63.9 bits (154), Expect = 5e-08
 Identities = 27/46 (58%), Positives = 39/46 (84%)
 Frame = +2

Query: 611 LKMAQTTEGVSEAVEKVSFSFMTDEEVRRHSVVKITNPVLLDSVDR 748
           +  AQTTEG S+ VE V FSFMT+++VR+HS +K+T+P+LLD+V+R
Sbjct: 1   MAQAQTTEGASQVVESVRFSFMTEQDVRKHSFLKVTSPILLDNVER 46


>ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis
           sativus]
          Length = 1650

 Score = 63.5 bits (153), Expect = 7e-08
 Identities = 30/44 (68%), Positives = 38/44 (86%)
 Frame = +2

Query: 617 MAQTTEGVSEAVEKVSFSFMTDEEVRRHSVVKITNPVLLDSVDR 748
           MAQTTEG SE+V+ V+FSFMT+EEVR+ SVVK+T P+LLD + R
Sbjct: 1   MAQTTEGASESVKVVTFSFMTNEEVRKQSVVKVTAPILLDGMGR 44


>ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
           tuberosum]
          Length = 1675

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 28/37 (75%), Positives = 32/37 (86%)
 Frame = +2

Query: 632 EGVSEAVEKVSFSFMTDEEVRRHSVVKITNPVLLDSV 742
           +G SEAVE V FSFMTDEEVRRHSVVK+T+P LLD +
Sbjct: 3   QGASEAVEAVHFSFMTDEEVRRHSVVKVTSPNLLDGL 39


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
           communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
           polymerase I largest subunit, putative [Ricinus
           communis]
          Length = 1686

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 25/44 (56%), Positives = 37/44 (84%)
 Frame = +2

Query: 617 MAQTTEGVSEAVEKVSFSFMTDEEVRRHSVVKITNPVLLDSVDR 748
           ++  ++G +E+++ +SFSF+TDEEVR+HS VKITNP LLD V+R
Sbjct: 4   ISSVSKGATESIDSISFSFLTDEEVRKHSFVKITNPRLLDLVER 47


>gb|EOY09356.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao]
          Length = 1689

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 27/44 (61%), Positives = 35/44 (79%)
 Frame = +2

Query: 617 MAQTTEGVSEAVEKVSFSFMTDEEVRRHSVVKITNPVLLDSVDR 748
           MAQ TEG +++VE V F+FMT EEVR+HS +K+TN  LLD +DR
Sbjct: 1   MAQITEGATDSVEAVRFNFMTTEEVRKHSFLKVTNANLLDLMDR 44


>gb|EOY09355.1| Nuclear RNA polymerase A1, putative isoform 1 [Theobroma cacao]
          Length = 1665

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 27/44 (61%), Positives = 35/44 (79%)
 Frame = +2

Query: 617 MAQTTEGVSEAVEKVSFSFMTDEEVRRHSVVKITNPVLLDSVDR 748
           MAQ TEG +++VE V F+FMT EEVR+HS +K+TN  LLD +DR
Sbjct: 1   MAQITEGATDSVEAVRFNFMTTEEVRKHSFLKVTNANLLDLMDR 44


>ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
           lycopersicum]
          Length = 1677

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 27/37 (72%), Positives = 31/37 (83%)
 Frame = +2

Query: 632 EGVSEAVEKVSFSFMTDEEVRRHSVVKITNPVLLDSV 742
           +G SE VE V FSFMTDEEVRRHSVVK+T+P LLD +
Sbjct: 3   QGASETVEAVHFSFMTDEEVRRHSVVKVTSPNLLDGL 39