BLASTX nr result

ID: Catharanthus23_contig00020563 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00020563
         (531 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006347306.1| PREDICTED: uncharacterized protein LOC102601...    86   5e-15
ref|XP_004241421.1| PREDICTED: uncharacterized protein LOC101255...    86   7e-15
ref|XP_002530299.1| conserved hypothetical protein [Ricinus comm...    74   3e-11
gb|EOY04770.1| DNA double-strand break repair rad50 ATPase, puta...    71   1e-10
ref|XP_006442933.1| hypothetical protein CICLE_v10019155mg [Citr...    68   1e-09
gb|EOY04772.1| DNA double-strand break repair rad50 ATPase, puta...    67   3e-09
ref|XP_004161030.1| PREDICTED: uncharacterized protein LOC101230...    66   6e-09
gb|ESW05694.1| hypothetical protein PHAVU_011G201600g [Phaseolus...    65   1e-08
gb|EPS70377.1| hypothetical protein M569_04384, partial [Genlise...    65   1e-08
ref|XP_003540689.1| PREDICTED: uncharacterized protein LOC100793...    65   1e-08
ref|XP_004289562.1| PREDICTED: uncharacterized protein LOC101297...    65   1e-08
gb|EXB55180.1| hypothetical protein L484_018107 [Morus notabilis]      64   2e-08
ref|XP_006372777.1| hypothetical protein POPTR_0017s04960g [Popu...    63   4e-08
ref|XP_006283249.1| hypothetical protein CARUB_v10004285mg [Caps...    63   4e-08
ref|XP_002328022.1| predicted protein [Populus trichocarpa]            63   4e-08
ref|XP_004144955.1| PREDICTED: uncharacterized protein LOC101214...    62   6e-08
ref|XP_002868647.1| hypothetical protein ARALYDRAFT_493934 [Arab...    60   3e-07
ref|XP_003606824.1| hypothetical protein MTR_4g068140 [Medicago ...    58   1e-06
ref|NP_001078685.1| uncharacterized protein [Arabidopsis thalian...    57   3e-06

>ref|XP_006347306.1| PREDICTED: uncharacterized protein LOC102601931 [Solanum tuberosum]
          Length = 705

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 39/69 (56%), Positives = 54/69 (78%)
 Frame = -3

Query: 208 MEPYVADCRAVLSEIKEQDKLLRLKRRWLMDLPLSKREQKRMKTFNYLMDKTIPETLLRE 29
           ME Y+ DC+ + S++K+QDK LRLKRRWLMDL LS+REQK+M       D ++PE+LLRE
Sbjct: 1   MESYMEDCKDLASQLKQQDKELRLKRRWLMDLDLSEREQKKMDRLKPPGDMSLPESLLRE 60

Query: 28  DDIFYDNMK 2
           DD+ Y+N++
Sbjct: 61  DDLHYENIR 69


>ref|XP_004241421.1| PREDICTED: uncharacterized protein LOC101255704 [Solanum
           lycopersicum]
          Length = 705

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 39/69 (56%), Positives = 54/69 (78%)
 Frame = -3

Query: 208 MEPYVADCRAVLSEIKEQDKLLRLKRRWLMDLPLSKREQKRMKTFNYLMDKTIPETLLRE 29
           ME Y  DC+ + S++K+QDK LRLKRRWLMDL LS+REQK+M       D ++PE+LLRE
Sbjct: 1   MESYREDCKDLASQLKKQDKELRLKRRWLMDLDLSEREQKKMDRLKPPGDMSLPESLLRE 60

Query: 28  DDIFYDNMK 2
           DD++Y+N++
Sbjct: 61  DDLYYENIR 69


>ref|XP_002530299.1| conserved hypothetical protein [Ricinus communis]
           gi|223530155|gb|EEF32066.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 699

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 35/66 (53%), Positives = 46/66 (69%)
 Frame = -3

Query: 199 YVADCRAVLSEIKEQDKLLRLKRRWLMDLPLSKREQKRMKTFNYLMDKTIPETLLREDDI 20
           Y  DC  +LS +K QD  L+LKRRWLM  P+SK E+K++     L  K++PE+ LREDDI
Sbjct: 8   YQTDCETILSHLKHQDYHLQLKRRWLMGFPMSKSEKKKL-----LRYKSLPESFLREDDI 62

Query: 19  FYDNMK 2
           FYD +K
Sbjct: 63  FYDTVK 68


>gb|EOY04770.1| DNA double-strand break repair rad50 ATPase, putative isoform 1
           [Theobroma cacao]
          Length = 644

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 32/63 (50%), Positives = 47/63 (74%)
 Frame = -3

Query: 190 DCRAVLSEIKEQDKLLRLKRRWLMDLPLSKREQKRMKTFNYLMDKTIPETLLREDDIFYD 11
           DC  +LS+IK Q+KL+ LKRRWLM L  S+ ++K+ K   +   KT+PE+LLR+DDIF++
Sbjct: 8   DCIEILSQIKHQEKLVNLKRRWLMGLSTSRSKRKQCKEPKFFRYKTLPESLLRDDDIFWE 67

Query: 10  NMK 2
            +K
Sbjct: 68  TIK 70


>ref|XP_006442933.1| hypothetical protein CICLE_v10019155mg [Citrus clementina]
           gi|568850245|ref|XP_006478828.1| PREDICTED:
           uncharacterized protein LOC102610692 isoform X1 [Citrus
           sinensis] gi|557545195|gb|ESR56173.1| hypothetical
           protein CICLE_v10019155mg [Citrus clementina]
          Length = 678

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 35/73 (47%), Positives = 51/73 (69%), Gaps = 4/73 (5%)
 Frame = -3

Query: 208 MEP---YVADCRAVLSEIKEQDKLLRLKRRWLMDLPLSKREQKRMKTFNYLMD-KTIPET 41
           MEP    + DC ++LS+IK Q+K L+ KRRWLM L  SK E+   K   +L + +++PE+
Sbjct: 1   MEPTNFLLTDCESILSDIKRQEKQLKRKRRWLMGLTTSKSEKHWSKGPKFLKEHRSLPES 60

Query: 40  LLREDDIFYDNMK 2
           LLREDDI ++N+K
Sbjct: 61  LLREDDILFENIK 73


>gb|EOY04772.1| DNA double-strand break repair rad50 ATPase, putative isoform 3
           [Theobroma cacao]
          Length = 642

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 31/63 (49%), Positives = 47/63 (74%)
 Frame = -3

Query: 190 DCRAVLSEIKEQDKLLRLKRRWLMDLPLSKREQKRMKTFNYLMDKTIPETLLREDDIFYD 11
           DC  +LS+IK Q+KL+ LKRRWLM L  S+ ++K+ K   +   +T+PE+LLR+DDIF++
Sbjct: 8   DCIEILSQIKHQEKLVNLKRRWLMGLSTSRSKRKQCKEPKFF--RTLPESLLRDDDIFWE 65

Query: 10  NMK 2
            +K
Sbjct: 66  TIK 68


>ref|XP_004161030.1| PREDICTED: uncharacterized protein LOC101230050 [Cucumis sativus]
          Length = 665

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 31/69 (44%), Positives = 47/69 (68%)
 Frame = -3

Query: 208 MEPYVADCRAVLSEIKEQDKLLRLKRRWLMDLPLSKREQKRMKTFNYLMDKTIPETLLRE 29
           ME Y  D +A+L +I+  + LL+ KRRWL+ LP S+  +K     ++L  + +PE+LLRE
Sbjct: 1   MEFYQTDSQALLVQIRRHEALLKSKRRWLLGLPTSESRRKYPDHSDFLNKQNLPESLLRE 60

Query: 28  DDIFYDNMK 2
           DDIFY+ +K
Sbjct: 61  DDIFYETVK 69


>gb|ESW05694.1| hypothetical protein PHAVU_011G201600g [Phaseolus vulgaris]
           gi|561006701|gb|ESW05695.1| hypothetical protein
           PHAVU_011G201600g [Phaseolus vulgaris]
          Length = 689

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 27/63 (42%), Positives = 48/63 (76%)
 Frame = -3

Query: 190 DCRAVLSEIKEQDKLLRLKRRWLMDLPLSKREQKRMKTFNYLMDKTIPETLLREDDIFYD 11
           D  ++LS+IK QDK ++LK RWL+ +P ++ E+K++K   Y  ++ + E+L+REDD+FY+
Sbjct: 7   DALSILSQIKRQDKQIKLKSRWLLSIPPTRSERKKLK--KYFKNRNLSESLIREDDMFYE 64

Query: 10  NMK 2
           ++K
Sbjct: 65  SVK 67


>gb|EPS70377.1| hypothetical protein M569_04384, partial [Genlisea aurea]
          Length = 74

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 31/62 (50%), Positives = 45/62 (72%)
 Frame = -3

Query: 208 MEPYVADCRAVLSEIKEQDKLLRLKRRWLMDLPLSKREQKRMKTFNYLMDKTIPETLLRE 29
           +E Y  D ++++S +K+ + LLRLKRRWLMDLPLSK +QKR++      DK +PE+ +RE
Sbjct: 13  VELYKEDFKSLISSMKKDESLLRLKRRWLMDLPLSKTDQKRIQEILPGGDKILPESFVRE 72

Query: 28  DD 23
            D
Sbjct: 73  GD 74


>ref|XP_003540689.1| PREDICTED: uncharacterized protein LOC100793232 isoform X1 [Glycine
           max] gi|571492111|ref|XP_006592130.1| PREDICTED:
           uncharacterized protein LOC100793232 isoform X2 [Glycine
           max]
          Length = 677

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 26/64 (40%), Positives = 50/64 (78%)
 Frame = -3

Query: 193 ADCRAVLSEIKEQDKLLRLKRRWLMDLPLSKREQKRMKTFNYLMDKTIPETLLREDDIFY 14
           AD +++LS  K +DK ++LK +WL+ +PL+K + K++K  NY+ ++ + E+L+REDD+FY
Sbjct: 7   ADAQSILSHFKRKDKQIKLKSKWLLGIPLTKYKMKKLK--NYIKNRYLSESLIREDDMFY 64

Query: 13  DNMK 2
           ++++
Sbjct: 65  ESVR 68


>ref|XP_004289562.1| PREDICTED: uncharacterized protein LOC101297681 [Fragaria vesca
           subsp. vesca]
          Length = 642

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 29/66 (43%), Positives = 45/66 (68%)
 Frame = -3

Query: 199 YVADCRAVLSEIKEQDKLLRLKRRWLMDLPLSKREQKRMKTFNYLMDKTIPETLLREDDI 20
           Y  DC  +  +IK ++K ++LKRRWL+ +PLS+ EQ +   F +     +PE+LLREDD+
Sbjct: 5   YQTDCETLWCQIKHKEKQIQLKRRWLLGIPLSESEQNK---FEHFGRDLLPESLLREDDM 61

Query: 19  FYDNMK 2
           FY+ +K
Sbjct: 62  FYETVK 67


>gb|EXB55180.1| hypothetical protein L484_018107 [Morus notabilis]
          Length = 629

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 28/66 (42%), Positives = 43/66 (65%)
 Frame = -3

Query: 199 YVADCRAVLSEIKEQDKLLRLKRRWLMDLPLSKREQKRMKTFNYLMDKTIPETLLREDDI 20
           +  D  ++LS+IK Q K ++ KRRWL+ L  S+ E+   K   +L   ++PE+ LREDDI
Sbjct: 11  FPGDIESILSKIKHQQKQIQQKRRWLLGLSTSEEERNHSKKLKFLDTSSLPESFLREDDI 70

Query: 19  FYDNMK 2
           FY+ +K
Sbjct: 71  FYETVK 76


>ref|XP_006372777.1| hypothetical protein POPTR_0017s04960g [Populus trichocarpa]
           gi|550319425|gb|ERP50574.1| hypothetical protein
           POPTR_0017s04960g [Populus trichocarpa]
          Length = 655

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 28/63 (44%), Positives = 44/63 (69%)
 Frame = -3

Query: 190 DCRAVLSEIKEQDKLLRLKRRWLMDLPLSKREQKRMKTFNYLMDKTIPETLLREDDIFYD 11
           D  A+++  K ++K+L+LKRRWL+ LP SK E K      Y++ + +PE+L R+DDIFY+
Sbjct: 11  DGEAIITHEKHKEKILKLKRRWLLGLPFSKSEDKNF--HKYVVSRFVPESLQRDDDIFYE 68

Query: 10  NMK 2
            +K
Sbjct: 69  KVK 71


>ref|XP_006283249.1| hypothetical protein CARUB_v10004285mg [Capsella rubella]
           gi|482551954|gb|EOA16147.1| hypothetical protein
           CARUB_v10004285mg [Capsella rubella]
          Length = 683

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 31/64 (48%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
 Frame = -3

Query: 190 DCRAVLSEIKEQDKLLRLKRRWLMDLPLSK-REQKRMKTFNYLMDKTIPETLLREDDIFY 14
           DC A+LS++KEQD+ +RLKRRWL+   +S+ ++    KT      + +PE+LLREDDIFY
Sbjct: 12  DCSAILSQLKEQDEQIRLKRRWLLGCDMSESKDNSHGKT------EFVPESLLREDDIFY 65

Query: 13  DNMK 2
           + +K
Sbjct: 66  ETIK 69


>ref|XP_002328022.1| predicted protein [Populus trichocarpa]
          Length = 655

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 28/63 (44%), Positives = 44/63 (69%)
 Frame = -3

Query: 190 DCRAVLSEIKEQDKLLRLKRRWLMDLPLSKREQKRMKTFNYLMDKTIPETLLREDDIFYD 11
           D  A+++  K ++K+L+LKRRWL+ LP SK E K      Y++ + +PE+L R+DDIFY+
Sbjct: 11  DGEAIITHEKHKEKILKLKRRWLLGLPFSKSEDKNF--HKYVVSRFVPESLQRDDDIFYE 68

Query: 10  NMK 2
            +K
Sbjct: 69  KVK 71


>ref|XP_004144955.1| PREDICTED: uncharacterized protein LOC101214737 [Cucumis sativus]
           gi|449471222|ref|XP_004153245.1| PREDICTED:
           uncharacterized protein LOC101217548 [Cucumis sativus]
          Length = 665

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 30/69 (43%), Positives = 46/69 (66%)
 Frame = -3

Query: 208 MEPYVADCRAVLSEIKEQDKLLRLKRRWLMDLPLSKREQKRMKTFNYLMDKTIPETLLRE 29
           ME    D +A+L +I+  + LL+ KRRWL+ LP S+  +K     ++L  + +PE+LLRE
Sbjct: 1   MEFCQTDSQALLVQIRRHEALLKSKRRWLLGLPTSESRRKYPDHSDFLNKQNLPESLLRE 60

Query: 28  DDIFYDNMK 2
           DDIFY+ +K
Sbjct: 61  DDIFYETVK 69


>ref|XP_002868647.1| hypothetical protein ARALYDRAFT_493934 [Arabidopsis lyrata subsp.
           lyrata] gi|297314483|gb|EFH44906.1| hypothetical protein
           ARALYDRAFT_493934 [Arabidopsis lyrata subsp. lyrata]
          Length = 685

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 29/67 (43%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
 Frame = -3

Query: 199 YVADCRAVLSEIKEQDKLLRLKRRWLMDLPLSK-REQKRMKTFNYLMDKTIPETLLREDD 23
           +  DC ++LS+IK+ DK +RLKRRWL+   +S+ ++    KT      + +PE+LLREDD
Sbjct: 10  FKTDCASILSQIKDHDKQIRLKRRWLLGCEMSESKDHTPGKT------EFVPESLLREDD 63

Query: 22  IFYDNMK 2
           +FY+ +K
Sbjct: 64  VFYETIK 70


>ref|XP_003606824.1| hypothetical protein MTR_4g068140 [Medicago truncatula]
           gi|355507879|gb|AES89021.1| hypothetical protein
           MTR_4g068140 [Medicago truncatula]
          Length = 731

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/66 (42%), Positives = 47/66 (71%), Gaps = 3/66 (4%)
 Frame = -3

Query: 190 DCRAVLSEIKEQDKLLRLKRRWLMDLPLSKREQKRMKTFNYLMDKT---IPETLLREDDI 20
           D  ++L + K QDK ++LKRRWL+ LP++ +E K++K     + KT    PE+LLR+DD+
Sbjct: 7   DISSILRDAKRQDKQIKLKRRWLLGLPITTKEGKKLKE----ICKTGWYSPESLLRQDDL 62

Query: 19  FYDNMK 2
           FY++++
Sbjct: 63  FYESVR 68


>ref|NP_001078685.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332007175|gb|AED94558.1| uncharacterized protein
           AT5G40520 [Arabidopsis thaliana]
          Length = 693

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 30/68 (44%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
 Frame = -3

Query: 199 YVADCRAVLSEIKEQDKLLRLKRRWLM--DLPLSKREQKRMKTFNYLMDKTIPETLLRED 26
           +  D  ++LS+IK+QD+ +RLKRRWL+  D+  S ++    KT      + +PE+LLRED
Sbjct: 10  FKTDFGSILSQIKDQDEQIRLKRRWLLGCDMSDSTKDHTPGKT------EFVPESLLRED 63

Query: 25  DIFYDNMK 2
           DIFY+ +K
Sbjct: 64  DIFYETIK 71


Top