BLASTX nr result

ID: Catharanthus23_contig00020365 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00020365
         (664 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006341202.1| PREDICTED: uncharacterized protein LOC102578...    64   4e-08
ref|XP_004246454.1| PREDICTED: uncharacterized protein LOC101261...    58   3e-06

>ref|XP_006341202.1| PREDICTED: uncharacterized protein LOC102578163 [Solanum tuberosum]
          Length = 274

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 53/172 (30%), Positives = 81/172 (47%), Gaps = 13/172 (7%)
 Frame = +3

Query: 60  LPDQNHHMFNSCTSFAPQICTYLYNNRSTNSDQGVIRVSGPPTKMDG---------EDYK 212
           LP  +HH  N    +  QICT++YN  S ++    IRVS   T             ++ K
Sbjct: 104 LPPNHHH--NRHVQYPSQICTFMYNPNSDSASGVPIRVSSQKTLATHHHSYFSSIVQEEK 161

Query: 213 KNNF---WSNLVGDESFHVSDLKNDDKKGTSSKSWDLSNGRAKSSNNNVKAADLSVSLNL 383
           KNN    WSNLV D+   +S +KND++K    KS D                D   +L +
Sbjct: 162 KNNLSSSWSNLVADKYSCLSSVKNDEEK--KLKSIDFKK-------------DQERNLEV 206

Query: 384 LVCRKRTNNASVDDEEEEMINYQSSKRRKIDDASN-SFISLFPRSSNPTENC 536
           ++      ++S   + + ++   + KRRK+D   N SF +LFPR+S+  E C
Sbjct: 207 MI------DSSFRTKHDHIVE-TNCKRRKVDQEDNISFANLFPRTSSSIERC 251


>ref|XP_004246454.1| PREDICTED: uncharacterized protein LOC101261848 [Solanum
           lycopersicum]
          Length = 276

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 56/172 (32%), Positives = 77/172 (44%), Gaps = 14/172 (8%)
 Frame = +3

Query: 63  PDQNHHMFNSCTSFAPQIC-TYLYNNRSTNSDQGVIRVSGPPTKMDGE---------DYK 212
           P  ++H  NS   +  QIC T++YN  S ++    IRVS   T              + K
Sbjct: 104 PLHSNHHHNSHVQYPSQICNTFMYNPNSDSASGVPIRVSSQKTLETHHHSSLSSIVHEEK 163

Query: 213 KNNF---WSNLVGDESFHVSDLKNDDKKGTSSKSWDLSNGRAKSSNNNVKAADLSVSLNL 383
           KN+    WSNLV D+   +S +KND++K    KS D    + +               NL
Sbjct: 164 KNSLSSSWSNLVADKYSCLSSVKNDEEK--KMKSIDFKKDQER---------------NL 206

Query: 384 LVCRKRTNNASVDDEEEEMINYQSSKRRKIDDASN-SFISLFPRSSNPTENC 536
            V    +  A  D   E   NY   KRRK+D   N SF +LFPR+S+  E C
Sbjct: 207 EVMIDSSFRAKHDHIVEP--NY---KRRKVDQEDNISFANLFPRTSSSIERC 253


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