BLASTX nr result
ID: Catharanthus23_contig00020154
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00020154
(742 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004231645.1| PREDICTED: uncharacterized protein LOC101244... 85 3e-14
gb|EOX91271.1| AP2/B3-like transcriptional factor family protein... 79 2e-12
ref|XP_003633180.1| PREDICTED: uncharacterized protein LOC100854... 79 2e-12
ref|XP_006423109.1| hypothetical protein CICLE_v10028984mg [Citr... 78 4e-12
emb|CAN65918.1| hypothetical protein VITISV_028778 [Vitis vinifera] 77 5e-12
gb|EOX91270.1| AP2/B3-like transcriptional factor family protein... 75 2e-11
ref|XP_003592583.1| 60S ribosomal protein L7 [Medicago truncatul... 74 5e-11
emb|CAN71750.1| hypothetical protein VITISV_040593 [Vitis vinifera] 71 3e-10
ref|XP_006344812.1| PREDICTED: B3 domain-containing transcriptio... 70 7e-10
gb|AAQ55453.1| reduced vernalization response 1 [Brassica rapa s... 70 7e-10
gb|AAR92199.1| reduced vernalization response 1 [Brassica rapa] 70 1e-09
gb|EOX91273.1| Uncharacterized protein TCM_000519 [Theobroma cacao] 69 1e-09
ref|XP_004301863.1| PREDICTED: uncharacterized protein LOC101303... 69 1e-09
ref|XP_004233419.1| PREDICTED: B3 domain-containing transcriptio... 69 2e-09
ref|XP_004305844.1| PREDICTED: B3 domain-containing protein LOC_... 68 3e-09
gb|EMJ23917.1| hypothetical protein PRUPE_ppa009916mg [Prunus pe... 68 4e-09
ref|XP_002328737.1| predicted protein [Populus trichocarpa] gi|5... 68 4e-09
dbj|BAB01695.1| unnamed protein product [Arabidopsis thaliana] 66 1e-08
ref|XP_006299472.1| hypothetical protein CARUB_v10015637mg [Caps... 66 1e-08
pdb|4I1K|A Chain A, Crystal Structure Of Vrn1 (residues 208-341)... 66 1e-08
>ref|XP_004231645.1| PREDICTED: uncharacterized protein LOC101244431 [Solanum
lycopersicum]
Length = 1607
Score = 84.7 bits (208), Expect = 3e-14
Identities = 72/247 (29%), Positives = 104/247 (42%), Gaps = 1/247 (0%)
Frame = +1
Query: 1 SIETRFFLVFKYLGNSQLRVLIFDINGVEIEYPXXXXXXXXXXXXXXXXXXXXXXXVEIL 180
SI FL+F Y S V IFD++ EIEYP V+I+
Sbjct: 304 SISRGHFLMFGYNTPSHFDVTIFDVSAAEIEYPYSSRTFHFHETHHAPIIDLSESDVDIM 363
Query: 181 QSYPRNRASKRAKCVEEDDSVQILDDLAEGEPNGLPIKQNQTEELDCSRQKMKKNGKSMG 360
+ PR + K K V+ +++ + +G + + + + KK+ KS+
Sbjct: 364 EDTPRRQKLKE-KVVDHSLENLCYGQISKRKRHGDDVASPSFTKKVQNCRIHKKDSKSV- 421
Query: 361 ISIGNNATEMVXXXXXXXXXXXXXXXXNPFFIYLVQPSSVSGKVGMYIPRNFEAQYMKKM 540
N T M NPF I +QPS VS + IP F +Y +
Sbjct: 422 --YDQNKTVMEKESSTAYQQAKAFKSKNPFIISFMQPSYVSASFNLSIPLKFARKYFLEN 479
Query: 541 KG-LELNLDVAGSKKTWPVILLMYSPKRALFGVGWKEFVKENALKVGDVCVFELVKAARK 717
G L L + GS W V + G GWK FV++N LKVGDVCVFE++K
Sbjct: 480 NGNLVLRVPGIGS---WSVKCTL-GMTNGKVGSGWKAFVQDNKLKVGDVCVFEVLKGQLF 535
Query: 718 FNVIIYQ 738
+VII++
Sbjct: 536 VDVIIFR 542
Score = 67.0 bits (162), Expect = 6e-09
Identities = 57/180 (31%), Positives = 80/180 (44%), Gaps = 8/180 (4%)
Frame = +1
Query: 223 VEEDDSVQILDDLAEGEPNGLPIKQNQTEELDCSRQKM-------KKNGKSMGISIGNNA 381
VE+ + +IL G G KQ++ + + S K KK+ KS+ N
Sbjct: 804 VEQGEGTEILGHCPSGR--GSKRKQSEVDAVVPSFTKKAQNCRIHKKDSKSV---YDQNK 858
Query: 382 TEMVXXXXXXXXXXXXXXXXNPFFIYLVQPSSVSGKVGMYIPRNFEAQYMKKMKG-LELN 558
T M NPF I +QPS VS + IP F +Y + G L L
Sbjct: 859 TVMEKESSTAYQQAKAFKSKNPFTISFMQPSYVSASFNLSIPLKFARKYFLENNGNLVLR 918
Query: 559 LDVAGSKKTWPVILLMYSPKRALFGVGWKEFVKENALKVGDVCVFELVKAARKFNVIIYQ 738
+ GS W V + G GWK FV++N LKVGD+CVFE++K +VII++
Sbjct: 919 VPGIGS---WSVKCTL-GMTNGKVGSGWKAFVQDNKLKVGDICVFEVLKGQLFVDVIIFR 974
Score = 65.1 bits (157), Expect = 2e-08
Identities = 41/100 (41%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Frame = +1
Query: 442 NPFFIYLVQPSSVSGKVGMYIPRNFEAQYMKKMKG-LELNLDVAGSKKTWPVILLMYSPK 618
NPF I +QPS VS + IP F +Y + G L L + GS W V +
Sbjct: 663 NPFTISFMQPSYVSASFNLSIPLKFARKYFLENNGNLVLRVPGIGS---WSVKCTL-GMT 718
Query: 619 RALFGVGWKEFVKENALKVGDVCVFELVKAARKFNVIIYQ 738
G GWK FV++N LKVGDVCVFE++K +VII++
Sbjct: 719 NGKVGSGWKAFVQDNKLKVGDVCVFEVLKGQLFVDVIIFR 758
Score = 62.0 bits (149), Expect = 2e-07
Identities = 55/173 (31%), Positives = 77/173 (44%), Gaps = 8/173 (4%)
Frame = +1
Query: 226 EEDDSVQILDDLAEGEPNGLPIKQNQTEELDCS-RQKMKKNGKSMG-------ISIGNNA 381
E+ + +IL G G KQ + + + S +K KK+G S G I N
Sbjct: 1021 EQGEGTEILGHCPSGR--GSKRKQPEVDAVVSSFTRKTKKSGGSCGLHKKQSKIVYDKNK 1078
Query: 382 TEMVXXXXXXXXXXXXXXXXNPFFIYLVQPSSVSGKVGMYIPRNFEAQYMKKMKGLELNL 561
T NPF + +QPS +S + I F +Y + G L L
Sbjct: 1079 TVTDKKSSIAYQRAKAFKSKNPFIVSFMQPSYISKHYILKIWSAFARKYFLENDG-NLVL 1137
Query: 562 DVAGSKKTWPVILLMYSPKRALFGVGWKEFVKENALKVGDVCVFELVKAARKF 720
V+GS +W V + + A F GWK FV EN LK+GDVCVFE++K + F
Sbjct: 1138 RVSGSG-SWSVKCTITTAS-AKFNYGWKTFVLENELKLGDVCVFEVIKGGQLF 1188
Score = 61.2 bits (147), Expect = 3e-07
Identities = 38/100 (38%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Frame = +1
Query: 442 NPFFIYLVQPSSVSGKVGMYIPRNFEAQYMKKMKGLELNLDVAGSKKTWPVILLMYSPKR 621
NPF IY +QPS VS +++ ++ +Y+ + G +L L AG + +W V + P+
Sbjct: 1306 NPFVIYFMQPSYVSRPYNLHMTFSYAQKYLWEKCG-DLVLRAAG-RGSWSVKYDLGLPEG 1363
Query: 622 ALFGVGWKEFVKENALKVGDVCVFELVKAARKF-NVIIYQ 738
+ + W+ FV +N LK GDVCVFEL+K + F +VII++
Sbjct: 1364 RI-RLSWRAFVLDNKLKSGDVCVFELIKGTQPFLDVIIFR 1402
Score = 61.2 bits (147), Expect = 3e-07
Identities = 41/102 (40%), Positives = 59/102 (57%), Gaps = 4/102 (3%)
Frame = +1
Query: 442 NPFFIYLVQPSSVS---GKVGMYIPRNFEAQYMKKMKGLELNLDVAGSKKTWPVILLMYS 612
NPFF+ +QPS VS G + + I + ++ + ++ L+V+ SK+ W V +
Sbjct: 1503 NPFFLSFMQPSYVSLARGPIQLSIASSVARKFFSTRQS-DVVLEVS-SKRRWTVKCSV-G 1559
Query: 613 PKRALFGVGWKEFVKENALKVGDVCVFELV-KAARKFNVIIY 735
K A F GWKEFV +N LKVGDVC+FE + FNVII+
Sbjct: 1560 IKTAKFSCGWKEFVVDNKLKVGDVCIFEWTGRPNLVFNVIIF 1601
>gb|EOX91271.1| AP2/B3-like transcriptional factor family protein, putative
[Theobroma cacao]
Length = 482
Score = 79.0 bits (193), Expect = 2e-12
Identities = 79/282 (28%), Positives = 112/282 (39%), Gaps = 36/282 (12%)
Frame = +1
Query: 1 SIETRFFLVFKYLGNSQLRVLIFDINGVEIEYPXXXXXXXXXXXXXXXXXXXXXXXVEIL 180
S+E FLVF+Y G V+IFD + EIEYP
Sbjct: 118 SLEYGHFLVFRYEGFCNFHVVIFDRSASEIEYPYGSNNHRQH------------------ 159
Query: 181 QSYPRNRASKRAKCVEEDDSVQILDDLAEGEPNGLPIKQNQTEELDCSR-QKMKKNGKSM 357
+ P + + E+ DS+QIL+D++ G + L CSR KM ++ S
Sbjct: 160 KELPEQKIEES----EDADSLQILEDISPSRKTG------EKSHLPCSRPHKMMRSANSA 209
Query: 358 GISIGNNATEMVXXXXXXXXXXXXXXXX----------------------------NPFF 453
+ N E + NPFF
Sbjct: 210 NKTESNLKCESLAPHFRHNGSPDRKADKSTTSHRIKKLNADKKAKALQRARAFKSENPFF 269
Query: 454 IYLVQPSSV--SGKVGMYIPRNFEAQYMKKMKGLELNLDVAGSKKTWPVILLMYSPKRAL 627
+ ++QPS V +GK + IP NF +++ K + E+ L + KTW V L R L
Sbjct: 270 LLVMQPSYVGLNGKWRLAIPNNFVWKHLMK-EDCEVIL-CNSNGKTWTVSLYRRGNGREL 327
Query: 628 F----GVGWKEFVKENALKVGDVCVFELVKAAR-KFNVIIYQ 738
GWK FVK+N +++GDVCVFEL+ F V IYQ
Sbjct: 328 LYAGLQTGWKTFVKDNNIQIGDVCVFELINCMEISFKVTIYQ 369
>ref|XP_003633180.1| PREDICTED: uncharacterized protein LOC100854873 [Vitis vinifera]
Length = 1020
Score = 78.6 bits (192), Expect = 2e-12
Identities = 68/247 (27%), Positives = 101/247 (40%), Gaps = 1/247 (0%)
Frame = +1
Query: 1 SIETRFFLVFKYLGNSQLRVLIFDINGVEIEYPXXXXXXXXXXXXXXXXXXXXXXXVEIL 180
SI FL+F+Y G+S VLIFD+ EIEYP VE L
Sbjct: 807 SIRYGHFLLFRYEGSSHFHVLIFDMTASEIEYPYATAPNHYHNHHKVS--------VESL 858
Query: 181 QSYPRNRASKRAKCVEEDDSVQILDDLAEGEPNGLPIKQNQTEELDCSRQKMKKNGKSMG 360
+P +SK A + D + I A PNG + K G
Sbjct: 859 DDFP---SSKTANYM---DMIDITSSEAVFYPNGA--------------SSLPKVEDIQG 898
Query: 361 ISIGNNATEMVXXXXXXXXXXXXXXXXNPFFIYLVQPSSVSGKVGMYIPRNFEAQYMKKM 540
++G NPFFI ++PS + G+ IP +F ++ K
Sbjct: 899 GALGRAKA---------------FKFENPFFIVTMRPSYIGSWYGLSIPLSFVKRHFKT- 942
Query: 541 KGLELNLDVAGSKKTWPVILLMYSPKRALFGVGWKEFVKENALKVGDVCVFELVK-AARK 717
+ L V+ + TW V ++ + F GW +F ++N+L+VGDVC FEL+K
Sbjct: 943 DNKKTTLSVSDGR-TWSVKYIIMKKSKVKFSSGWTKFARDNSLEVGDVCAFELIKCTGTS 1001
Query: 718 FNVIIYQ 738
V+I++
Sbjct: 1002 LKVVIFR 1008
>ref|XP_006423109.1| hypothetical protein CICLE_v10028984mg [Citrus clementina]
gi|557525043|gb|ESR36349.1| hypothetical protein
CICLE_v10028984mg [Citrus clementina]
Length = 287
Score = 77.8 bits (190), Expect = 4e-12
Identities = 72/258 (27%), Positives = 108/258 (41%), Gaps = 22/258 (8%)
Frame = +1
Query: 1 SIETRFFLVFKYLGNSQLRVLIFDINGVEIEYPXXXXXXXXXXXXXXXXXXXXXXXVEIL 180
SI + +FL+FKY GNS V IFD+ EIEYP V I
Sbjct: 27 SIHSGYFLIFKYQGNSNFNVYIFDLAISEIEYPSLEEPSDSKQCH-----------VPIE 75
Query: 181 QSYPRNRASK-----RAKCVEE-DDSVQILDD-----LAEGEPNGLPIK--------QNQ 303
+ +N + + RA C + + ++LD+ + +G+ I+ NQ
Sbjct: 76 KDKEKNSSLRILPPLRAPCPDPFSPATKVLDEGVCYKCNKDSTSGVKIEYLHIPKDEHNQ 135
Query: 304 TEELDCSRQK---MKKNGKSMGISIGNNATEMVXXXXXXXXXXXXXXXXNPFFIYLVQPS 474
C + K K +G+ TE NP F +++PS
Sbjct: 136 ETAFHCPQDKGIQFKNTSDEVGLRWRAVTTE---EKKRTVHAAEMYKSNNPLFRVILRPS 192
Query: 475 SVSGKVGMYIPRNFEAQYMKKMKGLELNLDVAGSKKTWPVILLMYSPKRALFGVGWKEFV 654
V + +++P +F +Y+ +KG +D G K WPV + + A F GW EFV
Sbjct: 193 YVYRTLLLHVPTSFARKYLNGIKGYITIIDSNG--KQWPVRCI-FKNGGAKFSKGWPEFV 249
Query: 655 KENALKVGDVCVFELVKA 708
EN L DVCVFEL+K+
Sbjct: 250 WENNLDESDVCVFELIKS 267
>emb|CAN65918.1| hypothetical protein VITISV_028778 [Vitis vinifera]
Length = 352
Score = 77.4 bits (189), Expect = 5e-12
Identities = 70/246 (28%), Positives = 101/246 (41%), Gaps = 1/246 (0%)
Frame = +1
Query: 1 SIETRFFLVFKYLGNSQLRVLIFDINGVEIEYPXXXXXXXXXXXXXXXXXXXXXXXVEIL 180
SI FL+F+Y G+S VLIFD+ EIEYP VE L
Sbjct: 139 SIGYGHFLLFRYEGSSHFHVLIFDMTASEIEYPYATAPNHYHNHXKVS--------VESL 190
Query: 181 QSYPRNRASKRAKCVEEDDSVQILDDLAEGEPNGLPIKQNQTEELDCSRQKMKKNGKSMG 360
+P +SK A + D + I A PNG + K G
Sbjct: 191 DDFP---SSKTANYM---DMIDITSSEAVFYPNGA--------------SSLPKVEDIQG 230
Query: 361 ISIGNNATEMVXXXXXXXXXXXXXXXXNPFFIYLVQPSSVSGKVGMYIPRNFEAQYMKKM 540
++G NPFFI ++PS V G+ IP +F ++ K
Sbjct: 231 GALGRAKA---------------FKFENPFFIVTMRPSYVGSWYGLSIPLSFVKRHFKTD 275
Query: 541 KGLELNLDVAGSKKTWPVILLMYSPKRALFGVGWKEFVKENALKVGDVCVFELVK-AARK 717
+ L V+ + TW V ++ + F GW +F ++N+L+VGDVC FEL+K
Sbjct: 276 XN-KTTLSVSDGR-TWSVKYIIMKKSKVKFSSGWTKFARDNSLEVGDVCAFELIKCTGTS 333
Query: 718 FNVIIY 735
V+I+
Sbjct: 334 LKVVIF 339
>gb|EOX91270.1| AP2/B3-like transcriptional factor family protein, putative
[Theobroma cacao]
Length = 567
Score = 75.5 bits (184), Expect = 2e-11
Identities = 79/288 (27%), Positives = 109/288 (37%), Gaps = 42/288 (14%)
Frame = +1
Query: 1 SIETRFFLVFKYLGNSQLRVLIFDINGVEIEYPXXXXXXXXXXXXXXXXXXXXXXXVEIL 180
S+E FLVF+Y GN V+IFD + EIEYP
Sbjct: 88 SLEYGHFLVFRYEGNCNFHVIIFDRSASEIEYP--------------------------- 120
Query: 181 QSYPRNRASKRAKCVEE-------DDSVQILDDLAEGEPNGLPIKQNQTEELDCSR-QKM 336
Y N + + EE D+S+QIL+D+A K + L C R KM
Sbjct: 121 --YTSNNHGQHKELPEEKIEESEGDNSIQILEDIAPSR------KTREKSHLSCLRPHKM 172
Query: 337 KKNGKSMGISIGNNATEMVXXXXXXXXXXXXXXXX------------------------- 441
++ S + N +E +
Sbjct: 173 MRSTNSANKTESNLKSESLFPQFRHDGSPARKGDKSTSRHRIQKLKADNKAKALQRARAF 232
Query: 442 ---NPFFIYLVQPSSVSGK--VGMYIPRNFEAQYMKKMKGLELNLDVAGSKKTWPVILLM 606
NPFF+ ++QPS V K + IP NF +++ K + +NL + KTW V
Sbjct: 233 KSENPFFLLVMQPSYVGFKSTCRLAIPNNFVRKHLMK-EDCVVNL-CNSNGKTWTVSFHC 290
Query: 607 YSPKRAL---FGVGWKEFVKENALKVGDVCVFELVKAAR-KFNVIIYQ 738
+R L GWK F +N ++VGDVCVFEL F V IYQ
Sbjct: 291 REKERKLNASLQSGWKTFANDNNIQVGDVCVFELTNCIEISFKVCIYQ 338
>ref|XP_003592583.1| 60S ribosomal protein L7 [Medicago truncatula]
gi|355481631|gb|AES62834.1| 60S ribosomal protein L7
[Medicago truncatula]
Length = 608
Score = 73.9 bits (180), Expect = 5e-11
Identities = 60/247 (24%), Positives = 106/247 (42%), Gaps = 1/247 (0%)
Frame = +1
Query: 1 SIETRFFLVFKYLGNSQLRVLIFDINGVEIEYPXXXXXXXXXXXXXXXXXXXXXXXVEIL 180
S++ ++F+Y S V IFD + EIEY +EIL
Sbjct: 85 SLDHGHMVLFQYQKTSHFEVYIFDKSTFEIEY-----------RVDGNNQHEQSNPIEIL 133
Query: 181 QSYPRNRASKRAKCVEEDDSVQILDDLAEGEPNGLPIKQNQTEELDCSRQKMKKNGKSMG 360
P + S+ + ++ L + E G K +L ++++ K +
Sbjct: 134 DEQPSYKKSRPKSQISSSQPLKKLR-IDASEDVGTSSKSQNIPKLVQVKEEIDSTTKCLN 192
Query: 361 ISIGNNATEMVXXXXXXXXXXXXXXXXNPFFIYLVQPSSVSGKVGMYIPRNFEAQYMKKM 540
+ G NPFF ++ S V+ M++P NFE +Y+K+
Sbjct: 193 VKHGQEQRNSTAKIVEALNKAKNYESNNPFFTAIMTYSYVNQY--MHVPLNFEQKYLKEQ 250
Query: 541 KGLELNLDVAGSKKTWPVILLMYSPKRALFGVGWKEFVKENALKVGDVCVFELVKA-ARK 717
+ E+ L V ++TW ++ Y ++ GWK FV +N LK+GDVC+FE++ + +
Sbjct: 251 QS-EIALQVLDDERTW---IVKYCLRK--MSNGWKTFVSDNNLKLGDVCLFEMINSKSYA 304
Query: 718 FNVIIYQ 738
F V+I++
Sbjct: 305 FKVLIFR 311
>emb|CAN71750.1| hypothetical protein VITISV_040593 [Vitis vinifera]
Length = 617
Score = 71.2 bits (173), Expect = 3e-10
Identities = 66/235 (28%), Positives = 97/235 (41%)
Frame = +1
Query: 1 SIETRFFLVFKYLGNSQLRVLIFDINGVEIEYPXXXXXXXXXXXXXXXXXXXXXXXVEIL 180
SI FL+F+Y G+S VLIFD+ EIEYP VE +
Sbjct: 66 SIGYGHFLLFRYEGSSHFHVLIFDMTASEIEYPYATAPNHYHNHHKVS--------VESM 117
Query: 181 QSYPRNRASKRAKCVEEDDSVQILDDLAEGEPNGLPIKQNQTEELDCSRQKMKKNGKSMG 360
+P +SK A + D + I A PNG + E++ + K+ K
Sbjct: 118 DDFP---SSKTANYM---DMIDITSSEAVFYPNGAS-SLPKVEDIQGGALERAKSFK--- 167
Query: 361 ISIGNNATEMVXXXXXXXXXXXXXXXXNPFFIYLVQPSSVSGKVGMYIPRNFEAQYMKKM 540
PFFI ++PS V K + +P +F ++ K+
Sbjct: 168 -------------------------FEKPFFIITMRPSYVGSKKSLTVPLSFVKRHFKRD 202
Query: 541 KGLELNLDVAGSKKTWPVILLMYSPKRALFGVGWKEFVKENALKVGDVCVFELVK 705
+ L V+ + TW V + F GW +FV++N+L+VGDVC FELVK
Sbjct: 203 NNNTI-LSVSDGR-TWSVKYIKRK-NNVQFSSGWTKFVRDNSLEVGDVCAFELVK 254
>ref|XP_006344812.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
[Solanum tuberosum]
Length = 333
Score = 70.1 bits (170), Expect = 7e-10
Identities = 70/238 (29%), Positives = 91/238 (38%), Gaps = 4/238 (1%)
Frame = +1
Query: 1 SIETRFFLVFKYLGNSQLRVLIFDINGVEIEYPXXXXXXXXXXXXXXXXXXXXXXXVEIL 180
SI F +F Y S V IFD + EIEYP E L
Sbjct: 89 SIRRGNFFMFGYNARSHFNVTIFDFSAAEIEYPPAEIESDDSIDILDVVEHSS----EYL 144
Query: 181 QSYPRNRASKRAKCV-EEDDSVQI---LDDLAEGEPNGLPIKQNQTEELDCSRQKMKKNG 348
P + KR + EE+D + + + + E E G + +E DC + + N
Sbjct: 145 SYDPVVQERKRIRQEGEEEDDIPVEHQTNVIDEEEFQGNVVSLVISE--DCEEHEQQSN- 201
Query: 349 KSMGISIGNNATEMVXXXXXXXXXXXXXXXXNPFFIYLVQPSSVSGKVGMYIPRNFEAQY 528
I E NPF + + PS VS +YIP F Y
Sbjct: 202 ----IVTSKRKAERDEGIADNYQRAKAFKSKNPFIVSFMHPSYVSRPHALYIPLKFARMY 257
Query: 529 MKKMKGLELNLDVAGSKKTWPVILLMYSPKRALFGVGWKEFVKENALKVGDVCVFELV 702
G L L V G K +WPV +M K A GWK FV +N LK GDVCV E++
Sbjct: 258 FMGNSG-NLVLRVPG-KGSWPVKCIMLR-KDAKVTCGWKAFVLDNKLKYGDVCVLEVI 312
>gb|AAQ55453.1| reduced vernalization response 1 [Brassica rapa subsp. oleifera]
Length = 329
Score = 70.1 bits (170), Expect = 7e-10
Identities = 69/264 (26%), Positives = 98/264 (37%), Gaps = 29/264 (10%)
Frame = +1
Query: 1 SIETRFFLVFKYLGNSQLRVLIFDINGVEIEYPXXXXXXXXXXXXXXXXXXXXXXXVEIL 180
SI + L+F+Y GNS V I+++ EI Y ++
Sbjct: 75 SIRIGYLLIFRYEGNSAFSVCIYNLPQSEINY----------------------HSTGLM 112
Query: 181 QSYPRNRASKRAKCVE--EDDSVQILDDLAEGEPNGL--PIKQN-----QTEELDCSRQK 333
S N KR + E ED+ + L A + P+K QT ++ R +
Sbjct: 113 DSASHNNHFKRPRLFEDLEDEDAETLHTTASAIQSFFTGPVKPEEATPTQTSKVPKKRGR 172
Query: 334 MKKNG--------------------KSMGISIGNNATEMVXXXXXXXXXXXXXXXXNPFF 453
KKN K + T NPFF
Sbjct: 173 KKKNADHPEEVNSSAPRDDDPESRSKFYESASARKGTVNAEERERAVNAAKTFEPTNPFF 232
Query: 454 IYLVQPSSVSGKVGMYIPRNFEAQYMKKMKGLELNLDVAGSKKTWPVILLMYSPKRALFG 633
+++PS + MY+P F +Y+ + G + V +K WPV L Y RA F
Sbjct: 233 RVVLRPSYLYRGCIMYLPSGFAEKYLSGISGF---IKVQLGEKQWPVRCL-YKAGRAKFS 288
Query: 634 VGWKEFVKENALKVGDVCVFELVK 705
GW EF EN L GDVCVFEL++
Sbjct: 289 QGWYEFTVENNLGEGDVCVFELLR 312
>gb|AAR92199.1| reduced vernalization response 1 [Brassica rapa]
Length = 329
Score = 69.7 bits (169), Expect = 1e-09
Identities = 69/264 (26%), Positives = 98/264 (37%), Gaps = 29/264 (10%)
Frame = +1
Query: 1 SIETRFFLVFKYLGNSQLRVLIFDINGVEIEYPXXXXXXXXXXXXXXXXXXXXXXXVEIL 180
SI + L+F+Y GNS V I+++ EI Y ++
Sbjct: 75 SIRIGYLLIFRYEGNSAFSVCIYNLPQSEINY----------------------HSTGLM 112
Query: 181 QSYPRNRASKRAKCVE--EDDSVQILDDLAEGEPNGL--PIKQN-----QTEELDCSRQK 333
S N KR + E ED+ + L A + P+K QT ++ R +
Sbjct: 113 DSASHNNHFKRPRLFEDLEDEDAETLHTTASAIQSFFTGPVKPEEATPTQTSKVPKKRGR 172
Query: 334 MKKNG--------------------KSMGISIGNNATEMVXXXXXXXXXXXXXXXXNPFF 453
KKN K + T NPFF
Sbjct: 173 KKKNADHPEEVNSSAPRDDDPESRSKFYESASARKRTVNAEERERAVNAAKTFEPTNPFF 232
Query: 454 IYLVQPSSVSGKVGMYIPRNFEAQYMKKMKGLELNLDVAGSKKTWPVILLMYSPKRALFG 633
+++PS + MY+P F +Y+ + G + V +K WPV L Y RA F
Sbjct: 233 RVVLRPSYLYRGCIMYLPSGFAEKYLSGISGF---IKVQLGEKQWPVRCL-YKAGRAKFS 288
Query: 634 VGWKEFVKENALKVGDVCVFELVK 705
GW EF EN L GDVCVFEL++
Sbjct: 289 QGWYEFTVENNLGEGDVCVFELLR 312
>gb|EOX91273.1| Uncharacterized protein TCM_000519 [Theobroma cacao]
Length = 890
Score = 69.3 bits (168), Expect = 1e-09
Identities = 40/93 (43%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Frame = +1
Query: 442 NPFFIYLVQPSSVSGKVGMYIPRNFEAQYMKKMKGLELNLDVAGSKKTWPVILLMYSPK- 618
NPFF+ ++QPS +S M IP NF +Y K G E L ++ K +W V
Sbjct: 737 NPFFLVVIQPSHISRNYKMCIPSNFARKYFTKTHGGETVLCLSDGK-SWSVKYYRRGDDG 795
Query: 619 --RALFGVGWKEFVKENALKVGDVCVFELVKAA 711
R F GWK+F +N L VGDVCVFEL+K A
Sbjct: 796 NPRGQFSGGWKKFALDNNLVVGDVCVFELLKGA 828
Score = 64.7 bits (156), Expect = 3e-08
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Frame = +1
Query: 442 NPFFIYLVQPSSVSGKVGMYIPRNFEAQYMKKMKGLELNLDVAGSKKTWPVILLM---YS 612
NPFF+ ++QPS VS M +P F +Y K +G + L ++ S ++WP
Sbjct: 218 NPFFMVVMQPSYVSFSYRMSVPDGFARKYFKMTQG-NVILRIS-SGQSWPAKYYCRPNID 275
Query: 613 PKRALFGVGWKEFVKENALKVGDVCVFELVKAA 711
RA GW+EF K NAL+VGDVCVFEL + +
Sbjct: 276 NPRAQLRDGWQEFAKHNALEVGDVCVFELTRTS 308
Score = 58.9 bits (141), Expect = 2e-06
Identities = 39/106 (36%), Positives = 55/106 (51%), Gaps = 8/106 (7%)
Frame = +1
Query: 442 NPFFIYLVQPSSVSGKVGMYIPRNFEAQYMKKMKGLELNLDVAGSKKTWPVILLMYS--- 612
NP F ++QPS V + IP F +Y KK + L + +TW ++ Y+
Sbjct: 485 NPSFTVVMQPSYVLPGGSLSIPSQFVKRYFKKNGEVTLRVS---DGRTW---IVDYNGEG 538
Query: 613 ----PKRALFGVGWKEFVKENALKVGDVCVFELVKA-ARKFNVIIY 735
PK W+ FV +N LKVGDVCVFEL+KA F+V+I+
Sbjct: 539 DGQCPKGKFRSRSWRAFVLDNNLKVGDVCVFELIKANGNSFDVVIF 584
>ref|XP_004301863.1| PREDICTED: uncharacterized protein LOC101303135 [Fragaria vesca
subsp. vesca]
Length = 1490
Score = 69.3 bits (168), Expect = 1e-09
Identities = 66/263 (25%), Positives = 107/263 (40%), Gaps = 29/263 (11%)
Frame = +1
Query: 1 SIETRFFLVFKYLGNSQLRVLIFDINGVEIEYPXXXXXXXXXXXXXXXXXXXXXXXVEIL 180
S++ +FLVF+Y GNS V IFD + EI+YP +EIL
Sbjct: 607 SVDYGYFLVFRYQGNSTFEVCIFDRSCTEIDYPITVSTIDEDEADDLS--------IEIL 658
Query: 181 QSYPRNRASKRAK-----CVEEDDSVQILDDLAEGEPNGLPI------KQNQTEELDCSR 327
S P + ++ C + S+ D + + P K T++ CS
Sbjct: 659 DSSPCLKTREKPSIVCPPCKKMRTSLSTNSDRISEDESAPPYPMVYIEKTTPTKDSHCSS 718
Query: 328 QKMKKNGKSMGISIGNNA-------------TEMVXXXXXXXXXXXXXXXXNPFFIYLVQ 468
KMK G+ +++ N A ++ PFF ++
Sbjct: 719 SKMK-GGEGDFLAVENTAGASRCTRRFLKPTLDLEVTENAPKRATAFKPDGKPFFKISME 777
Query: 469 PSSVSGKVGMYIPRNFEAQYMKKMKGLELNLDVAG----SKKTWPVILLM-YSPKRALFG 633
S++ + +Y+P F +++ K+ L V+ S KTW V + +A F
Sbjct: 778 LSNIHKSI-LYLPSEFAQRHLIKLPAGIATLQVSSGRTLSAKTWSVKFKYDHKKSKAHFL 836
Query: 634 VGWKEFVKENALKVGDVCVFELV 702
GW +FV++N LKVGD+C F L+
Sbjct: 837 NGWSDFVRDNHLKVGDMCGFILI 859
>ref|XP_004233419.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
[Solanum lycopersicum]
Length = 331
Score = 68.9 bits (167), Expect = 2e-09
Identities = 68/240 (28%), Positives = 92/240 (38%), Gaps = 6/240 (2%)
Frame = +1
Query: 1 SIETRFFLVFKYLGNSQLRVLIFDINGVEIEYPXXXXXXXXXXXXXXXXXXXXXXXVEIL 180
SI F +F Y S V IFD + EIEYP E L
Sbjct: 89 SIRRGNFFMFGYNARSHFNVTIFDFSAAEIEYPPAEIESDDSIDISDVVEYSS----EYL 144
Query: 181 QSYPRNRASKRAKCVEEDDS------VQILDDLAEGEPNGLPIKQNQTEELDCSRQKMKK 342
P + KR + E+++ I+ D E + N + + ++ DC Q+
Sbjct: 145 SHDPLVKERKRIRQEGEEENDIPVERQTIVIDEEESQLNVVSLVISE----DCEEQQSN- 199
Query: 343 NGKSMGISIGNNATEMVXXXXXXXXXXXXXXXXNPFFIYLVQPSSVSGKVGMYIPRNFEA 522
I E NPF + + PS VS +YIP F
Sbjct: 200 ------IVTSKRKEERDEGTADNYQRAKAFKSKNPFIVSFMHPSYVSKPHALYIPLKFAR 253
Query: 523 QYMKKMKGLELNLDVAGSKKTWPVILLMYSPKRALFGVGWKEFVKENALKVGDVCVFELV 702
Y+ + G L L V G K +W V +M K A GWK FV +N LK GDVCVFE++
Sbjct: 254 MYLMRNSG-NLVLRVPG-KGSWSVKCVMLR-KDAKVTCGWKAFVLDNKLKYGDVCVFEVI 310
>ref|XP_004305844.1| PREDICTED: B3 domain-containing protein LOC_Os12g40080-like
[Fragaria vesca subsp. vesca]
Length = 597
Score = 68.2 bits (165), Expect = 3e-09
Identities = 58/226 (25%), Positives = 93/226 (41%)
Frame = +1
Query: 1 SIETRFFLVFKYLGNSQLRVLIFDINGVEIEYPXXXXXXXXXXXXXXXXXXXXXXXVEIL 180
S++ FLVF+Y GNS RV IFD++ E++YP +EIL
Sbjct: 82 SLDYGSFLVFRYEGNSHFRVCIFDMSATEVDYP----------ITIPKIDEAEDLSIEIL 131
Query: 181 QSYPRNRASKRAKCVEEDDSVQILDDLAEGEPNGLPIKQNQTEELDCSRQKMKKNGKSMG 360
+ + N K + + +DDL+ + + + T++L N S+
Sbjct: 132 EDFQLN-----PKTIRKSPRFNSVDDLSSEKDGSVTRGSSGTQKL--------LNQTSLK 178
Query: 361 ISIGNNATEMVXXXXXXXXXXXXXXXXNPFFIYLVQPSSVSGKVGMYIPRNFEAQYMKKM 540
+ +GN + NP FI ++PS + +P NF ++ K
Sbjct: 179 VVLGNAIS---------LRRAYDFKTENPLFIVSMKPSETQSSLS--LPLNFAKRHFIKR 227
Query: 541 KGLELNLDVAGSKKTWPVILLMYSPKRALFGVGWKEFVKENALKVG 678
+ L + +TW V YS + A F GW FVK+N L+VG
Sbjct: 228 PASNITLQILDG-RTWSV-EFTYSEEEARFQEGWLTFVKDNNLEVG 271
>gb|EMJ23917.1| hypothetical protein PRUPE_ppa009916mg [Prunus persica]
Length = 272
Score = 67.8 bits (164), Expect = 4e-09
Identities = 63/234 (26%), Positives = 96/234 (41%), Gaps = 7/234 (2%)
Frame = +1
Query: 22 LVFKYLGNSQLRVLIFDINGVEIEYPXXXXXXXXXXXXXXXXXXXXXXXVEILQSYPRNR 201
LVF+Y G S+ VLIFD +G+EIEYP +E +
Sbjct: 54 LVFRYEGKSKFHVLIFDESGIEIEYPTMPQIEETDEEEDDDMSTKEILEIE------DDD 107
Query: 202 ASKRAKCVEEDDSVQIL------DDLAEGEP-NGLPIKQNQTEELDCSRQKMKKNGKSMG 360
S + +E D+S++IL DD+ E P+ Q + S K + S
Sbjct: 108 KSVESLDIETDESLEILVIDEDDDDVKSVESLESFPLPQEKNRRKPRSSSKPSSSSSSSL 167
Query: 361 ISIGNNATEMVXXXXXXXXXXXXXXXXNPFFIYLVQPSSVSGKVGMYIPRNFEAQYMKKM 540
+ A + V +PFF + PS + ++P +F ++ +
Sbjct: 168 RAAVKAANKFVSS--------------HPFFKITLGPSRKA-----HVPASFR-KHFTPV 207
Query: 541 KGLELNLDVAGSKKTWPVILLMYSPKRALFGVGWKEFVKENALKVGDVCVFELV 702
K L V + WPV L+ + P+ F GW F K N LK GD+C+FEL+
Sbjct: 208 KNQTARLLVGA--RLWPVTLIFH-PQNYRFSAGWGAFEKANWLKEGDICIFELM 258
>ref|XP_002328737.1| predicted protein [Populus trichocarpa]
gi|566168349|ref|XP_006385100.1| hypothetical protein
POPTR_0004s23920g [Populus trichocarpa]
gi|550341868|gb|ERP62897.1| hypothetical protein
POPTR_0004s23920g [Populus trichocarpa]
Length = 558
Score = 67.8 bits (164), Expect = 4e-09
Identities = 71/284 (25%), Positives = 105/284 (36%), Gaps = 39/284 (13%)
Frame = +1
Query: 1 SIETRFFLVFKYLGNSQLRVLIFDINGVEIEYPXXXXXXXXXXXXXXXXXXXXXXX---- 168
S+ FLVF+Y N VLIFD + EI+YP
Sbjct: 84 SVACGHFLVFEYERNCDFHVLIFDNSATEIDYPLKNNRSEVPGRGLLKECTKDRGKENNS 143
Query: 169 VEILQSY--------------PRNRASKRAKCVEEDDSVQILDDLAEGEPNG-----LPI 291
VEIL + PR R E + L E P G + +
Sbjct: 144 VEILDHFSPSRRTRKKSPLPCPRPHKMVRTYSTYETGTCSKLSTSVEVPPTGTWSRGMKL 203
Query: 292 KQNQTE-ELDCSRQKMK-----KNGKSMGISIG----------NNATEMVXXXXXXXXXX 423
+ ++T+ +L CS + + + G+ M ++ G N +
Sbjct: 204 ESSKTKAKLRCSVRGLDEEDSIRGGRGMLMARGQRLSYAGALANMRSLTCYEKAKALCRT 263
Query: 424 XXXXXXNPFFIYLVQPSSVSGKVGMYIPRNFEAQYMKKMKGLELNLDVAGSKKTWPVILL 603
NPFF + PS V + +P +F +Y K KG + L V + TWPV
Sbjct: 264 SAFKSENPFFKVAMSPSYVHTGYKLSVPSSFARKYFTKNKG-NVTLCVTDGR-TWPVKYC 321
Query: 604 MYSPKRALFGVGWKEFVKENALKVGDVCVFELVKAARKFNVIIY 735
+ +F GWK F K+N L VGD CVFEL+ +++
Sbjct: 322 NRTKSGVIFCHGWKAFAKDNKLAVGDFCVFELINVTEMSLKVVF 365
>dbj|BAB01695.1| unnamed protein product [Arabidopsis thaliana]
Length = 230
Score = 65.9 bits (159), Expect = 1e-08
Identities = 37/88 (42%), Positives = 50/88 (56%)
Frame = +1
Query: 442 NPFFIYLVQPSSVSGKVGMYIPRNFEAQYMKKMKGLELNLDVAGSKKTWPVILLMYSPKR 621
NPFF +++PS + MY+P F +Y+ + G + V ++K WPV L Y R
Sbjct: 130 NPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGF---IKVQLAEKQWPVRCL-YKAGR 185
Query: 622 ALFGVGWKEFVKENALKVGDVCVFELVK 705
A F GW EF EN L GDVCVFEL++
Sbjct: 186 AKFSQGWYEFTLENNLGEGDVCVFELLR 213
>ref|XP_006299472.1| hypothetical protein CARUB_v10015637mg [Capsella rubella]
gi|482568181|gb|EOA32370.1| hypothetical protein
CARUB_v10015637mg [Capsella rubella]
Length = 341
Score = 65.9 bits (159), Expect = 1e-08
Identities = 37/88 (42%), Positives = 50/88 (56%)
Frame = +1
Query: 442 NPFFIYLVQPSSVSGKVGMYIPRNFEAQYMKKMKGLELNLDVAGSKKTWPVILLMYSPKR 621
NPFF +++PS + MY+P F +Y+ + G + V ++K WPV L Y R
Sbjct: 241 NPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGF---IKVQLAEKQWPVRCL-YKAGR 296
Query: 622 ALFGVGWKEFVKENALKVGDVCVFELVK 705
A F GW EF EN L GDVCVFEL++
Sbjct: 297 AKFSQGWYEFTLENNLGEGDVCVFELLR 324
>pdb|4I1K|A Chain A, Crystal Structure Of Vrn1 (residues 208-341)
gi|430801083|pdb|4I1K|B Chain B, Crystal Structure Of
Vrn1 (residues 208-341)
Length = 146
Score = 65.9 bits (159), Expect = 1e-08
Identities = 37/88 (42%), Positives = 50/88 (56%)
Frame = +1
Query: 442 NPFFIYLVQPSSVSGKVGMYIPRNFEAQYMKKMKGLELNLDVAGSKKTWPVILLMYSPKR 621
NPFF +++PS + MY+P F +Y+ + G + V ++K WPV L Y R
Sbjct: 46 NPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGF---IKVQLAEKQWPVRCL-YKAGR 101
Query: 622 ALFGVGWKEFVKENALKVGDVCVFELVK 705
A F GW EF EN L GDVCVFEL++
Sbjct: 102 AKFSQGWYEFTLENNLGEGDVCVFELLR 129