BLASTX nr result
ID: Catharanthus23_contig00020037
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00020037
(618 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004239184.1| PREDICTED: DNA polymerase alpha subunit B-li... 84 2e-14
ref|XP_006341754.1| PREDICTED: DNA polymerase alpha subunit B-li... 84 4e-14
ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [V... 76 9e-12
ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus comm... 75 1e-11
ref|XP_006484041.1| PREDICTED: DNA polymerase alpha subunit B-li... 70 4e-10
ref|XP_006378282.1| DNA polymerase alpha subunit B family protei... 70 4e-10
ref|XP_004137446.1| PREDICTED: DNA polymerase alpha subunit B-li... 70 4e-10
ref|XP_006438110.1| hypothetical protein CICLE_v10030973mg [Citr... 69 8e-10
ref|XP_004310044.1| PREDICTED: DNA polymerase alpha subunit B-li... 69 8e-10
gb|EMJ25471.1| hypothetical protein PRUPE_ppa018609mg [Prunus pe... 69 8e-10
gb|EOY00828.1| DNA polymerase alpha 2 [Theobroma cacao] 69 1e-09
ref|NP_176930.2| DNA polymerase alpha 2 [Arabidopsis thaliana] g... 64 4e-08
ref|XP_002888612.1| DNA polymerase alpha subunit B family [Arabi... 63 8e-08
dbj|BAC43176.1| putative DNA polymerase alpha subunit [Arabidops... 62 1e-07
ref|XP_006391243.1| hypothetical protein EUTSA_v10018287mg [Eutr... 62 1e-07
ref|XP_006300633.1| hypothetical protein CARUB_v10019947mg, part... 62 2e-07
ref|XP_006858888.1| hypothetical protein AMTR_s00066p00201540 [A... 60 4e-07
ref|XP_006591473.1| PREDICTED: DNA polymerase alpha subunit B-li... 59 1e-06
gb|ESW35722.1| hypothetical protein PHAVU_001G259300g [Phaseolus... 59 1e-06
gb|EPS73745.1| hypothetical protein M569_01012 [Genlisea aurea] 59 1e-06
>ref|XP_004239184.1| PREDICTED: DNA polymerase alpha subunit B-like [Solanum
lycopersicum]
Length = 617
Score = 84.3 bits (207), Expect = 2e-14
Identities = 38/60 (63%), Positives = 51/60 (85%)
Frame = -1
Query: 606 TQIPFYTQVLSPGERSKEGEQHKCLCINPGRLARGEGGGFFVELNYHGSPDSAIASIIRL 427
+ + + +V+S GERS EGE+ KC+C+NPGRL+RGEGGGFFVELNYHGS DS+ AS++R+
Sbjct: 559 SDLAHFVRVVSLGERS-EGEEVKCICVNPGRLSRGEGGGFFVELNYHGSCDSSSASVLRI 617
>ref|XP_006341754.1| PREDICTED: DNA polymerase alpha subunit B-like [Solanum tuberosum]
Length = 617
Score = 83.6 bits (205), Expect = 4e-14
Identities = 37/60 (61%), Positives = 51/60 (85%)
Frame = -1
Query: 606 TQIPFYTQVLSPGERSKEGEQHKCLCINPGRLARGEGGGFFVELNYHGSPDSAIASIIRL 427
+ + + +V+S GERS EGE+ KC+C+NPGRL+RGEGGGFF+ELNYHGS DS+ AS++R+
Sbjct: 559 SDLAHFVRVISLGERS-EGEEVKCICVNPGRLSRGEGGGFFMELNYHGSCDSSSASVLRI 617
>ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [Vitis vinifera]
gi|297738371|emb|CBI27572.3| unnamed protein product
[Vitis vinifera]
Length = 623
Score = 75.9 bits (185), Expect = 9e-12
Identities = 34/55 (61%), Positives = 43/55 (78%)
Frame = -1
Query: 591 YTQVLSPGERSKEGEQHKCLCINPGRLARGEGGGFFVELNYHGSPDSAIASIIRL 427
+ +VLS G R++ E KC+C+NPGRLA+GEGGG FVELNY GSPD AS+IR+
Sbjct: 569 FVKVLSLGGRNEGEELVKCICVNPGRLAKGEGGGHFVELNYQGSPDKTSASVIRI 623
>ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus communis]
gi|223546049|gb|EEF47552.1| alpha DNA polymerase,
putative [Ricinus communis]
Length = 621
Score = 75.1 bits (183), Expect = 1e-11
Identities = 35/58 (60%), Positives = 44/58 (75%)
Frame = -1
Query: 606 TQIPFYTQVLSPGERSKEGEQHKCLCINPGRLARGEGGGFFVELNYHGSPDSAIASII 433
+ + ++ +VLS G R + EQ KC+CINPGRLA+GEGGG FVELNY GSPD AS+I
Sbjct: 562 SDMKYFIKVLSLGGRIEGEEQTKCVCINPGRLAKGEGGGTFVELNYRGSPDKMNASVI 619
>ref|XP_006484041.1| PREDICTED: DNA polymerase alpha subunit B-like [Citrus sinensis]
Length = 620
Score = 70.5 bits (171), Expect = 4e-10
Identities = 31/60 (51%), Positives = 44/60 (73%)
Frame = -1
Query: 606 TQIPFYTQVLSPGERSKEGEQHKCLCINPGRLARGEGGGFFVELNYHGSPDSAIASIIRL 427
+ + ++ +VLS G R++ EQ KC+C+NPGRLA+GEG G F E+ YHGSP+ ASII +
Sbjct: 561 SDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYHGSPEMMHASIISI 620
>ref|XP_006378282.1| DNA polymerase alpha subunit B family protein [Populus trichocarpa]
gi|550329229|gb|ERP56079.1| DNA polymerase alpha subunit
B family protein [Populus trichocarpa]
Length = 618
Score = 70.5 bits (171), Expect = 4e-10
Identities = 34/58 (58%), Positives = 42/58 (72%)
Frame = -1
Query: 606 TQIPFYTQVLSPGERSKEGEQHKCLCINPGRLARGEGGGFFVELNYHGSPDSAIASII 433
+ + ++ +VL+ GE EQ KC+CINPGRLA+GEGGG F ELNY GSPD ASII
Sbjct: 562 SDMKYFMKVLTLGEGE---EQRKCICINPGRLAKGEGGGTFAELNYQGSPDKMNASII 616
>ref|XP_004137446.1| PREDICTED: DNA polymerase alpha subunit B-like [Cucumis sativus]
gi|449486914|ref|XP_004157440.1| PREDICTED: DNA
polymerase alpha subunit B-like [Cucumis sativus]
Length = 622
Score = 70.5 bits (171), Expect = 4e-10
Identities = 30/55 (54%), Positives = 40/55 (72%)
Frame = -1
Query: 591 YTQVLSPGERSKEGEQHKCLCINPGRLARGEGGGFFVELNYHGSPDSAIASIIRL 427
+ +V+S GE E EQ +C+C+NPGRLA+GEGGG FVELNY G PD A ++ +
Sbjct: 568 FVKVISLGEGGSEEEQARCVCVNPGRLAKGEGGGTFVELNYFGRPDQINAMVVSI 622
>ref|XP_006438110.1| hypothetical protein CICLE_v10030973mg [Citrus clementina]
gi|557540306|gb|ESR51350.1| hypothetical protein
CICLE_v10030973mg [Citrus clementina]
Length = 620
Score = 69.3 bits (168), Expect = 8e-10
Identities = 30/60 (50%), Positives = 44/60 (73%)
Frame = -1
Query: 606 TQIPFYTQVLSPGERSKEGEQHKCLCINPGRLARGEGGGFFVELNYHGSPDSAIASIIRL 427
+ + ++ +VLS G R++ EQ +C+C+NPGRLA+GEG G F E+ YHGSP+ ASII +
Sbjct: 561 SDMKYFIKVLSLGGRNEGEEQKRCVCVNPGRLAKGEGSGTFAEIYYHGSPEMMNASIISI 620
>ref|XP_004310044.1| PREDICTED: DNA polymerase alpha subunit B-like [Fragaria vesca
subsp. vesca]
Length = 620
Score = 69.3 bits (168), Expect = 8e-10
Identities = 34/59 (57%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
Frame = -1
Query: 606 TQIPFYTQVLSPGERSKEGEQH-KCLCINPGRLARGEGGGFFVELNYHGSPDSAIASII 433
+ + ++ +VLS GE GE KC+C+NPGRL++GEGGG FVELNY+GSPD++ ASII
Sbjct: 564 SDLKYFVKVLSLGE----GEPPVKCICVNPGRLSKGEGGGTFVELNYYGSPDTSNASII 618
>gb|EMJ25471.1| hypothetical protein PRUPE_ppa018609mg [Prunus persica]
Length = 612
Score = 69.3 bits (168), Expect = 8e-10
Identities = 30/42 (71%), Positives = 37/42 (88%)
Frame = -1
Query: 558 KEGEQHKCLCINPGRLARGEGGGFFVELNYHGSPDSAIASII 433
+E EQ KC+C+NPGRLA+GEGGG FVELNY+G+PD+ ASII
Sbjct: 569 EEKEQVKCICVNPGRLAKGEGGGTFVELNYYGNPDTCNASII 610
>gb|EOY00828.1| DNA polymerase alpha 2 [Theobroma cacao]
Length = 621
Score = 68.6 bits (166), Expect = 1e-09
Identities = 35/59 (59%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Frame = -1
Query: 606 TQIPFYTQVLSPGERSKEGEQ-HKCLCINPGRLARGEGGGFFVELNYHGSPDSAIASII 433
+ I ++ +VLS G S+ EQ KC+CINPGRLA+G GGG FVEL Y GSPD ASII
Sbjct: 561 SDIKYFVKVLSLGGTSEGKEQTKKCICINPGRLAKGAGGGTFVELKYQGSPDKMNASII 619
>ref|NP_176930.2| DNA polymerase alpha 2 [Arabidopsis thaliana]
gi|332196552|gb|AEE34673.1| DNA polymerase alpha 2
[Arabidopsis thaliana]
Length = 620
Score = 63.5 bits (153), Expect = 4e-08
Identities = 30/56 (53%), Positives = 40/56 (71%)
Frame = -1
Query: 594 FYTQVLSPGERSKEGEQHKCLCINPGRLARGEGGGFFVELNYHGSPDSAIASIIRL 427
++ ++LS GE E + KC+C+NPGRLA+GEG G FVEL Y G P+S ASII +
Sbjct: 568 YFVKILSLGE---EEDAAKCVCVNPGRLAKGEGAGTFVELTYKGGPESMHASIISI 620
>ref|XP_002888612.1| DNA polymerase alpha subunit B family [Arabidopsis lyrata subsp.
lyrata] gi|297334453|gb|EFH64871.1| DNA polymerase alpha
subunit B family [Arabidopsis lyrata subsp. lyrata]
Length = 619
Score = 62.8 bits (151), Expect = 8e-08
Identities = 30/56 (53%), Positives = 39/56 (69%)
Frame = -1
Query: 594 FYTQVLSPGERSKEGEQHKCLCINPGRLARGEGGGFFVELNYHGSPDSAIASIIRL 427
++ ++LS GE E KC+C+NPGRLA+GEG G FVEL Y G P+S ASII +
Sbjct: 567 YFVKILSLGE---EENAAKCVCVNPGRLAKGEGAGTFVELTYKGGPESMRASIISI 619
>dbj|BAC43176.1| putative DNA polymerase alpha subunit [Arabidopsis thaliana]
gi|29028994|gb|AAO64876.1| At1g67630 [Arabidopsis
thaliana]
Length = 620
Score = 62.4 bits (150), Expect = 1e-07
Identities = 29/56 (51%), Positives = 40/56 (71%)
Frame = -1
Query: 594 FYTQVLSPGERSKEGEQHKCLCINPGRLARGEGGGFFVELNYHGSPDSAIASIIRL 427
++ ++LS GE E + KC+C+NPGRLA+GEG G +VEL Y G P+S ASII +
Sbjct: 568 YFVKILSLGE---EEDAAKCVCVNPGRLAKGEGAGTYVELTYKGGPESMHASIISI 620
>ref|XP_006391243.1| hypothetical protein EUTSA_v10018287mg [Eutrema salsugineum]
gi|557087677|gb|ESQ28529.1| hypothetical protein
EUTSA_v10018287mg [Eutrema salsugineum]
Length = 622
Score = 62.0 bits (149), Expect = 1e-07
Identities = 30/56 (53%), Positives = 40/56 (71%)
Frame = -1
Query: 594 FYTQVLSPGERSKEGEQHKCLCINPGRLARGEGGGFFVELNYHGSPDSAIASIIRL 427
++ +VLS GE + KC+C+NPGRLA+GEG G FVEL+Y G P+S ASII +
Sbjct: 570 YFVKVLSLGEGE---DAVKCVCVNPGRLAKGEGAGTFVELSYKGGPESMHASIISI 622
>ref|XP_006300633.1| hypothetical protein CARUB_v10019947mg, partial [Capsella rubella]
gi|482569343|gb|EOA33531.1| hypothetical protein
CARUB_v10019947mg, partial [Capsella rubella]
Length = 639
Score = 61.6 bits (148), Expect = 2e-07
Identities = 30/56 (53%), Positives = 39/56 (69%)
Frame = -1
Query: 594 FYTQVLSPGERSKEGEQHKCLCINPGRLARGEGGGFFVELNYHGSPDSAIASIIRL 427
++ +VLS GE + KC+C+NPGRLA+GEG G FVEL Y G P+S ASII +
Sbjct: 587 YFVKVLSLGEGE---DAAKCVCVNPGRLAKGEGAGTFVELTYKGCPESMHASIISI 639
>ref|XP_006858888.1| hypothetical protein AMTR_s00066p00201540 [Amborella trichopoda]
gi|548862999|gb|ERN20355.1| hypothetical protein
AMTR_s00066p00201540 [Amborella trichopoda]
Length = 628
Score = 60.5 bits (145), Expect = 4e-07
Identities = 29/55 (52%), Positives = 37/55 (67%)
Frame = -1
Query: 591 YTQVLSPGERSKEGEQHKCLCINPGRLARGEGGGFFVELNYHGSPDSAIASIIRL 427
+ + L GE S + +CLCINPGRLA+G GG FVEL+Y +PD ASIIR+
Sbjct: 574 FIKALPFGEGSDTEKYSRCLCINPGRLAKGVSGGTFVELSYLNNPDQTSASIIRI 628
>ref|XP_006591473.1| PREDICTED: DNA polymerase alpha subunit B-like isoform X2 [Glycine
max]
Length = 577
Score = 58.5 bits (140), Expect = 1e-06
Identities = 31/59 (52%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Frame = -1
Query: 606 TQIPFYTQVLSPGERSKEGEQH-KCLCINPGRLARGEGGGFFVELNYHGSPDSAIASII 433
+ I ++ +VLS EG H KC+ INPGRLA+GEGGG FVEL+Y G+ D ASI+
Sbjct: 520 SDIKYFVKVLSS---ENEGINHTKCIAINPGRLAKGEGGGTFVELDYCGASDQINASIV 575
>gb|ESW35722.1| hypothetical protein PHAVU_001G259300g [Phaseolus vulgaris]
Length = 625
Score = 58.5 bits (140), Expect = 1e-06
Identities = 26/58 (44%), Positives = 36/58 (62%)
Frame = -1
Query: 606 TQIPFYTQVLSPGERSKEGEQHKCLCINPGRLARGEGGGFFVELNYHGSPDSAIASII 433
+ I ++ ++LS KC+ +NPGRLA+GEGGG FVEL+Y G D ASI+
Sbjct: 566 SDIKYFVKMLSSESEGINNSNSKCIAVNPGRLAKGEGGGTFVELHYGGGSDQINASIV 623
>gb|EPS73745.1| hypothetical protein M569_01012 [Genlisea aurea]
Length = 595
Score = 58.5 bits (140), Expect = 1e-06
Identities = 25/48 (52%), Positives = 34/48 (70%)
Frame = -1
Query: 570 GERSKEGEQHKCLCINPGRLARGEGGGFFVELNYHGSPDSAIASIIRL 427
GER +C+C+NPGRLARG GGGFF ++ + +P S+ ASIIR+
Sbjct: 548 GERPPPPPPPQCICVNPGRLARGNGGGFFAKVEFINNPGSSTASIIRI 595