BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00019825
         (741 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006344998.1| PREDICTED: pentatricopeptide repeat-containi...    94   6e-17
ref|XP_004236153.1| PREDICTED: pentatricopeptide repeat-containi...    89   2e-15
gb|EMJ12275.1| hypothetical protein PRUPE_ppa017205mg, partial [...    81   4e-13
ref|XP_003601293.1| Pentatricopeptide repeat-containing protein,...    79   1e-12
ref|XP_004501962.1| PREDICTED: pentatricopeptide repeat-containi...    79   2e-12
gb|ESW04378.1| hypothetical protein PHAVU_011G090300g [Phaseolus...    75   2e-11
ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containi...    75   3e-11
ref|XP_004301284.1| PREDICTED: pentatricopeptide repeat-containi...    72   2e-10
ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containi...    72   3e-10
emb|CBI15095.3| unnamed protein product [Vitis vinifera]               72   3e-10
ref|XP_002511467.1| pentatricopeptide repeat-containing protein,...    69   1e-09
gb|EXC32244.1| hypothetical protein L484_004747 [Morus notabilis]      69   2e-09
ref|XP_006591092.1| PREDICTED: pentatricopeptide repeat-containi...    68   4e-09
ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containi...    67   8e-09
ref|XP_002321560.2| pentatricopeptide repeat-containing family p...    65   2e-08
gb|EPS67440.1| hypothetical protein M569_07334, partial [Genlise...    65   2e-08
ref|XP_006390373.1| hypothetical protein EUTSA_v10018527mg [Eutr...    63   9e-08
ref|XP_006301673.1| hypothetical protein CARUB_v10022126mg [Caps...    62   2e-07
sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-c...    61   4e-07
dbj|BAD44503.1| hypothetical protein [Arabidopsis thaliana]            61   4e-07

>ref|XP_006344998.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like isoform X1 [Solanum tuberosum]
           gi|565356286|ref|XP_006344999.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like isoform X2 [Solanum tuberosum]
           gi|565356288|ref|XP_006345000.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like isoform X3 [Solanum tuberosum]
          Length = 486

 Score = 93.6 bits (231), Expect = 6e-17
 Identities = 41/63 (65%), Positives = 50/63 (79%)
 Frame = +3

Query: 552 ITNLILETDPQTLSHIFHNLTEWTPDLACTILKRLWNHGPKALEFFSLLDRHNAYILSAT 731
           I+NLIL++ P++LS   H LT+WTPDL   +LKRLWNHGPKAL FF+LLD H +Y  SAT
Sbjct: 38  ISNLILQSSPESLSDTLHTLTQWTPDLVQAVLKRLWNHGPKALHFFNLLDHHRSYTHSAT 97

Query: 732 AFD 740
           AFD
Sbjct: 98  AFD 100


>ref|XP_004236153.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Solanum lycopersicum]
          Length = 492

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 38/63 (60%), Positives = 49/63 (77%)
 Frame = +3

Query: 552 ITNLILETDPQTLSHIFHNLTEWTPDLACTILKRLWNHGPKALEFFSLLDRHNAYILSAT 731
           I+ LIL++ P++LS   H LT+WTPDL  ++LKRLWNHGPKAL+FF+LLD H +Y  S  
Sbjct: 44  ISTLILQSSPESLSDTLHTLTQWTPDLVQSVLKRLWNHGPKALQFFNLLDHHRSYTHSTI 103

Query: 732 AFD 740
           AFD
Sbjct: 104 AFD 106


>gb|EMJ12275.1| hypothetical protein PRUPE_ppa017205mg, partial [Prunus persica]
          Length = 403

 Score = 80.9 bits (198), Expect = 4e-13
 Identities = 37/64 (57%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
 Frame = +3

Query: 552 ITNLILETDPQTLSHIFHN-LTEWTPDLACTILKRLWNHGPKALEFFSLLDRHNAYILSA 728
           + NLIL++DPQTL+ I HN   EWT DL    LKRLWNHGPKA++FF +LD H +Y  S 
Sbjct: 14  LANLILQSDPQTLTQILHNPKIEWTADLVDKTLKRLWNHGPKAIQFFKVLDHHPSYTHSR 73

Query: 729 TAFD 740
           ++FD
Sbjct: 74  SSFD 77


>ref|XP_003601293.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula] gi|355490341|gb|AES71544.1|
           Pentatricopeptide repeat-containing protein, partial
           [Medicago truncatula]
          Length = 317

 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 38/65 (58%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
 Frame = +3

Query: 549 TITNLILETDPQTLSHIFHNLT-EWTPDLACTILKRLWNHGPKALEFFSLLDRHNAYILS 725
           T+  L+LE+DP+TLS    N T +WTP L   ILKRLWNHGPKAL+FF  LDRH  YI S
Sbjct: 40  TVAKLVLESDPKTLSQTLSNPTFQWTPLLVDNILKRLWNHGPKALQFFKHLDRHPTYIHS 99

Query: 726 ATAFD 740
            ++F+
Sbjct: 100 ISSFE 104


>ref|XP_004501962.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Cicer arietinum]
          Length = 498

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 37/65 (56%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
 Frame = +3

Query: 549 TITNLILETDPQTLSHIFHNLT-EWTPDLACTILKRLWNHGPKALEFFSLLDRHNAYILS 725
           TI  L+LE+DP +LS    NL  +WTP L   +LKRLWNHGPKAL+FF  L+RH  YI S
Sbjct: 48  TIAKLVLESDPTSLSETLTNLNFQWTPHLVNNVLKRLWNHGPKALQFFKHLERHPTYIHS 107

Query: 726 ATAFD 740
            +AF+
Sbjct: 108 TSAFE 112


>gb|ESW04378.1| hypothetical protein PHAVU_011G090300g [Phaseolus vulgaris]
          Length = 491

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 36/65 (55%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
 Frame = +3

Query: 549 TITNLILETDPQTLSHIFHNLT-EWTPDLACTILKRLWNHGPKALEFFSLLDRHNAYILS 725
           TI  L+LE+DP TLS      T +W P+L   +LKRLWNHGPKAL+FF  LDRH +YI  
Sbjct: 40  TIAKLVLESDPLTLSEALCMPTIQWAPELVNRVLKRLWNHGPKALQFFKHLDRHPSYIHC 99

Query: 726 ATAFD 740
           +++FD
Sbjct: 100 SSSFD 104


>ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Glycine max]
          Length = 495

 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 36/66 (54%), Positives = 48/66 (72%), Gaps = 2/66 (3%)
 Frame = +3

Query: 549 TITNLILETDPQTLSHIFHNLT-EWTPDLACTILKRLWNHGPKALEFFSLLDRHN-AYIL 722
           TI  L+LE+DP+T+S      T +WTPDL   ++KRLWNHGPKAL+FF  LDRH+ +Y  
Sbjct: 43  TIAKLVLESDPRTVSEALTKPTIQWTPDLVNKVMKRLWNHGPKALQFFKHLDRHHPSYTH 102

Query: 723 SATAFD 740
           S ++FD
Sbjct: 103 SPSSFD 108


>ref|XP_004301284.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 489

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 34/61 (55%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
 Frame = +3

Query: 561 LILETDPQTLSHIFHNLT-EWTPDLACTILKRLWNHGPKALEFFSLLDRHNAYILSATAF 737
           LIL++DPQ+L+ I H+    WTPD     LKRLWNHGPKAL FF  LDRH  Y  S++++
Sbjct: 43  LILKSDPQSLTRILHDPNIHWTPDSVNKTLKRLWNHGPKALLFFKTLDRHPTYTHSSSSY 102

Query: 738 D 740
           D
Sbjct: 103 D 103


>ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Vitis vinifera]
          Length = 450

 Score = 71.6 bits (174), Expect = 3e-10
 Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
 Frame = +3

Query: 549 TITNLILETDPQTLSHIFHNL-TEWTPDLACTILKRLWNHGPKALEFFSLLDRHNAYILS 725
           TI NL+L+TD QTL+        EWTP+L   +LK LWNHGPKAL+FF  LD H  Y   
Sbjct: 41  TIVNLVLKTDSQTLTRTLEKYPVEWTPNLVDRVLKLLWNHGPKALQFFKSLDYHPTYAHV 100

Query: 726 ATAFD 740
           +++FD
Sbjct: 101 SSSFD 105


>emb|CBI15095.3| unnamed protein product [Vitis vinifera]
          Length = 815

 Score = 71.6 bits (174), Expect = 3e-10
 Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
 Frame = +3

Query: 549 TITNLILETDPQTLSHIFHNL-TEWTPDLACTILKRLWNHGPKALEFFSLLDRHNAYILS 725
           TI NL+L+TD QTL+        EWTP+L   +LK LWNHGPKAL+FF  LD H  Y   
Sbjct: 41  TIVNLVLKTDSQTLTRTLEKYPVEWTPNLVDRVLKLLWNHGPKALQFFKSLDYHPTYAHV 100

Query: 726 ATAFD 740
           +++FD
Sbjct: 101 SSSFD 105


>ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550582|gb|EEF52069.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 482

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 35/66 (53%), Positives = 45/66 (68%), Gaps = 2/66 (3%)
 Frame = +3

Query: 549 TITNLILE-TDPQTLSHIFHNLT-EWTPDLACTILKRLWNHGPKALEFFSLLDRHNAYIL 722
           T+  LIL  T+ QTL+   H+ + +WTP L  TILKRLWNHGPKAL FF +L  H +Y  
Sbjct: 31  TLAALILNSTNSQTLAESLHSPSIQWTPQLVNTILKRLWNHGPKALHFFKILSHHPSYCH 90

Query: 723 SATAFD 740
            A++FD
Sbjct: 91  QASSFD 96


>gb|EXC32244.1| hypothetical protein L484_004747 [Morus notabilis]
          Length = 521

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
 Frame = +3

Query: 549 TITNLILETDPQTLSHIFHNLT-EWTPDLACTILKRLWNHGPKALEFFSLLDRHNAYILS 725
           + TNL+L++D +TL+   ++    WTP L   ILK+LWNHGPKAL+FF  LD H  Y  +
Sbjct: 32  SFTNLVLKSDRETLTRTLNDPNLHWTPHLVDRILKKLWNHGPKALQFFKTLDYHPNYAHA 91

Query: 726 ATAFD 740
           A++FD
Sbjct: 92  ASSFD 96


>ref|XP_006591092.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial isoform X1 [Glycine max]
           gi|571489017|ref|XP_006591093.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial isoform X2 [Glycine max]
          Length = 492

 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 36/66 (54%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
 Frame = +3

Query: 549 TITNLILETDPQTLSHIFHN-LTEWTPDLACTILKRLWNHGPKALEFFSLLDRH-NAYIL 722
           TI  L+LE+DP+TLS         WTP+L    LKRLWNHGPKAL FF  LDRH  +Y  
Sbjct: 40  TIAKLVLESDPRTLSEALTKPRIHWTPELVNKTLKRLWNHGPKALLFFKHLDRHLPSYTH 99

Query: 723 SATAFD 740
           S ++FD
Sbjct: 100 SPSSFD 105


>ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Cucumis sativus]
           gi|449487784|ref|XP_004157799.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Cucumis sativus]
          Length = 502

 Score = 66.6 bits (161), Expect = 8e-09
 Identities = 32/64 (50%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
 Frame = +3

Query: 552 ITNLILETDPQTLSHIFHNLT-EWTPDLACTILKRLWNHGPKALEFFSLLDRHNAYILSA 728
           I  L+LE+DP++L    H L  ++TP+L   +LKRLW HGPKAL+FF  L+ H +Y  SA
Sbjct: 53  IATLVLESDPKSLRGSLHGLQLQFTPELVDKVLKRLWFHGPKALQFFKHLEYHPSYAHSA 112

Query: 729 TAFD 740
           ++FD
Sbjct: 113 SSFD 116


>ref|XP_002321560.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550322291|gb|EEF05687.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 491

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 30/63 (47%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
 Frame = +3

Query: 555 TNLILETDPQTLSHIFHNLT-EWTPDLACTILKRLWNHGPKALEFFSLLDRHNAYILSAT 731
           T ++  ++PQ L+   H+ T +WTP L  TILKRLWN GPKAL+FF+LL  H +Y    +
Sbjct: 43  TLILTSSNPQALAQTLHSPTIQWTPQLVNTILKRLWNDGPKALQFFNLLSHHPSYSHHPS 102

Query: 732 AFD 740
           ++D
Sbjct: 103 SYD 105


>gb|EPS67440.1| hypothetical protein M569_07334, partial [Genlisea aurea]
          Length = 451

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 34/64 (53%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
 Frame = +3

Query: 552 ITNLILET-DPQTLSHIFHNLTEWTPDLACTILKRLWNHGPKALEFFSLLDRHNAYILSA 728
           I +LIL++ + + L    H+ T+WT      +LKRLWNHGPKALEFF  LDRH  Y  SA
Sbjct: 1   IGDLILQSRNREILIGTVHSRTDWTQARVQDVLKRLWNHGPKALEFFEALDRHPRYRHSA 60

Query: 729 TAFD 740
            AFD
Sbjct: 61  AAFD 64


>ref|XP_006390373.1| hypothetical protein EUTSA_v10018527mg [Eutrema salsugineum]
           gi|557086807|gb|ESQ27659.1| hypothetical protein
           EUTSA_v10018527mg [Eutrema salsugineum]
          Length = 454

 Score = 63.2 bits (152), Expect = 9e-08
 Identities = 28/44 (63%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
 Frame = +3

Query: 612 TEWTPDLACTILKRLWNHGPKALEFFSLLDRHN-AYILSATAFD 740
           T WTP L  ++LKRLWNHGPKAL+FF LLDRH+  Y+  A++FD
Sbjct: 53  TPWTPQLVNSVLKRLWNHGPKALQFFHLLDRHHREYVHVASSFD 96


>ref|XP_006301673.1| hypothetical protein CARUB_v10022126mg [Capsella rubella]
           gi|482570383|gb|EOA34571.1| hypothetical protein
           CARUB_v10022126mg [Capsella rubella]
          Length = 451

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 3/66 (4%)
 Frame = +3

Query: 552 ITNLILETDPQTLSHIFHNL--TEWTPDLACTILKRLWNHGPKALEFFSLLD-RHNAYIL 722
           I N IL + P T+     ++  T WTP+L  ++LKRLWNHGPKAL+FF  LD  H +Y+ 
Sbjct: 29  IANQILSS-PTTIDQSLVSIKTTPWTPNLVNSVLKRLWNHGPKALQFFHFLDTHHRSYVH 87

Query: 723 SATAFD 740
            A++FD
Sbjct: 88  HASSFD 93


>sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g74900, mitochondrial; AltName: Full=Protein
           ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
           Precursor gi|5882733|gb|AAD55286.1|AC008263_17 Contains
           a PF|01535 DUF17 domain [Arabidopsis thaliana]
           gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical
           protein; 69434-67986 [Arabidopsis thaliana]
          Length = 482

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 26/44 (59%), Positives = 34/44 (77%), Gaps = 1/44 (2%)
 Frame = +3

Query: 612 TEWTPDLACTILKRLWNHGPKALEFFSLLDRHN-AYILSATAFD 740
           T WTP+L  ++LKRLWNHGPKAL+FF  LD H+  Y+  A++FD
Sbjct: 52  TPWTPNLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFD 95


>dbj|BAD44503.1| hypothetical protein [Arabidopsis thaliana]
          Length = 447

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 26/44 (59%), Positives = 34/44 (77%), Gaps = 1/44 (2%)
 Frame = +3

Query: 612 TEWTPDLACTILKRLWNHGPKALEFFSLLDRHN-AYILSATAFD 740
           T WTP+L  ++LKRLWNHGPKAL+FF  LD H+  Y+  A++FD
Sbjct: 46  TPWTPNLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFD 89