BLASTX nr result
ID: Catharanthus23_contig00019763
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00019763
(1059 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI36057.3| unnamed protein product [Vitis vinifera] 314 4e-83
ref|XP_006343144.1| PREDICTED: MMS19 nucleotide excision repair ... 311 2e-82
ref|XP_004236399.1| PREDICTED: MMS19 nucleotide excision repair ... 311 2e-82
ref|XP_002515963.1| DNA repair/transcription protein met18/mms19... 295 2e-77
ref|XP_006426876.1| hypothetical protein CICLE_v10024743mg [Citr... 282 2e-73
gb|EMJ18740.1| hypothetical protein PRUPE_ppa023072mg [Prunus pe... 282 2e-73
ref|XP_006465695.1| PREDICTED: MMS19 nucleotide excision repair ... 281 3e-73
ref|XP_006465694.1| PREDICTED: MMS19 nucleotide excision repair ... 281 3e-73
ref|XP_006385450.1| hypothetical protein POPTR_0003s04720g [Popu... 274 5e-71
ref|XP_004302857.1| PREDICTED: uncharacterized protein LOC101304... 267 5e-69
gb|ESW22599.1| hypothetical protein PHAVU_005G166100g [Phaseolus... 267 6e-69
gb|EOY26936.1| MMS19 nucleotide excision repair protein, putativ... 265 2e-68
gb|EOY26935.1| MMS19 nucleotide excision repair protein, putativ... 265 2e-68
gb|EOY26934.1| MMS19 nucleotide excision repair protein, putativ... 265 2e-68
gb|EOY26932.1| MMS19 nucleotide excision repair protein, putativ... 265 2e-68
ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair ... 263 7e-68
gb|EXB74582.1| hypothetical protein L484_026279 [Morus notabilis] 260 7e-67
ref|XP_004155994.1| PREDICTED: MMS19 nucleotide excision repair ... 256 1e-65
ref|XP_003597674.1| MMS19 nucleotide excision repair protein-lik... 256 1e-65
ref|XP_006597169.1| PREDICTED: MMS19 nucleotide excision repair ... 250 8e-64
>emb|CBI36057.3| unnamed protein product [Vitis vinifera]
Length = 1146
Score = 314 bits (804), Expect = 4e-83
Identities = 172/357 (48%), Positives = 241/357 (67%), Gaps = 5/357 (1%)
Frame = +2
Query: 2 DVPLKFAVTMLEKIEDSASSGHMVQNNDLHTATVTAIKNAVACCSEGGQKTILHKAFRVL 181
DV +FAV + +IE+S + Q N+L AT+TA+K AV CSEG Q I+ KA+ VL
Sbjct: 680 DVLSRFAVNIWNQIENSMAFSVGAQENELLNATMTAMKLAVGSCSEGSQGKIIKKAYSVL 739
Query: 182 SSS-TLELKDSMSV---FRWEGSNYVDSLHRVSYRDEWIISLFASVVIALHPQTHIPDIK 349
SS + L +SM + + EG + L S RD+W+ISLFAS +IA+ PQTHIP+I+
Sbjct: 740 SSCPSFTLMESMPITGTVQLEGLQHTQDLECFSCRDKWVISLFASAIIAVRPQTHIPNIR 799
Query: 350 MLLHLFAMDLLRGHIPSAQALGSLVNKLPSRNSSLGSSHECCLEEAIDMIFSSNLWSLFK 529
++LHLF +LL+GH+P+AQALGS+VNKL +++ + S C LE+A+D+IF+++LW
Sbjct: 800 VVLHLFMTNLLKGHVPAAQALGSMVNKLCPKSNGVEISSTCTLEDALDIIFNTSLWDSHN 859
Query: 530 LNNVKENPVLGVDGKMDYSNLTVSDMNHVSARTCCAILGLAWIGKGLVMRGHERVKDITM 709
+K +GVD +M +NL +S N CAI GLAWIGKGL++RGHE+VKDITM
Sbjct: 860 HGPLKRCSGIGVDNEMGLANLCLSASN-CQLLQVCAIEGLAWIGKGLLLRGHEKVKDITM 918
Query: 710 TFLSILLQNGSTGGLLQFHNLMEGFTEQEVL-SLMRSAADAFHILMSDSEACLNRKYHAA 886
FL LL + EQ+VL S+ +SAADAFH+LMSDSE CLN+++HA
Sbjct: 919 IFLRCLLSKNN--------------QEQDVLPSVAKSAADAFHVLMSDSEICLNKRFHAN 964
Query: 887 IRPLYKQRFYNTLMPIFASSITKSNSSIVRCMLARSFAHVVSETPLPAILNDAKMVI 1057
IRPLYKQRF+++++PI SS+ +S S R ML R+ AH++S+TPL A+L++AK +I
Sbjct: 965 IRPLYKQRFFSSVLPILVSSMAESRLSNTRSMLYRALAHIISDTPLIAVLSEAKKII 1021
>ref|XP_006343144.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Solanum
tuberosum]
Length = 1170
Score = 311 bits (798), Expect = 2e-82
Identities = 173/356 (48%), Positives = 234/356 (65%), Gaps = 4/356 (1%)
Frame = +2
Query: 2 DVPLKFAVTMLEKIEDSASSGHMVQNNDLHTATVTAIKNAVACCSEGGQKTILHKAFRVL 181
+V L FA+ + K+E+++S + +L AT+ A+K A+ CS Q+ +L KA V+
Sbjct: 707 EVSLSFAINIFTKMENNSSLSLEAKGKELLGATMAAMKQAMTGCSVESQEKVLQKAIDVM 766
Query: 182 SSSTLELKDSM----SVFRWEGSNYVDSLHRVSYRDEWIISLFASVVIALHPQTHIPDIK 349
+S+ L + + +F + + + +S RDEWI SLFASVVIAL PQT IP+I+
Sbjct: 767 ETSSFFLSNDLILGTDLFN-KKTQLGQTSEGLSCRDEWITSLFASVVIALRPQTQIPNIR 825
Query: 350 MLLHLFAMDLLRGHIPSAQALGSLVNKLPSRNSSLGSSHECCLEEAIDMIFSSNLWSLFK 529
+LL L AM LL GHIPSAQALGSLVNKLP L S +C LEE ID +F + +W
Sbjct: 826 LLLQLLAMTLLEGHIPSAQALGSLVNKLP-----LNISEDCSLEELIDTLFKNVMW---- 876
Query: 530 LNNVKENPVLGVDGKMDYSNLTVSDMNHVSARTCCAILGLAWIGKGLVMRGHERVKDITM 709
N+ G + SNL ++ +N A++G AWIGKGL+MRGHE++KD+TM
Sbjct: 877 -RNISIGKEGNDGGAVAMSNLRLNSLNSH------AVIGFAWIGKGLLMRGHEKLKDVTM 929
Query: 710 TFLSILLQNGSTGGLLQFHNLMEGFTEQEVLSLMRSAADAFHILMSDSEACLNRKYHAAI 889
TFLS L+ N G LL F++ M+ E +VL L +SAADAFHILMSDS+ACLNR YHA +
Sbjct: 930 TFLSCLVSNEDQGNLLPFNDQMKDPAEHKVLCLRKSAADAFHILMSDSDACLNRNYHAIV 989
Query: 890 RPLYKQRFYNTLMPIFASSITKSNSSIVRCMLARSFAHVVSETPLPAILNDAKMVI 1057
RPLYKQRF+N +MP+F S+I K +SS RC L ++FAH+VSETPL A++ DAK V+
Sbjct: 990 RPLYKQRFFNIMMPMFLSAIVKCDSSTSRCFLYQAFAHLVSETPLVAVVGDAKKVL 1045
>ref|XP_004236399.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Solanum
lycopersicum]
Length = 1153
Score = 311 bits (798), Expect = 2e-82
Identities = 175/360 (48%), Positives = 236/360 (65%), Gaps = 8/360 (2%)
Frame = +2
Query: 2 DVPLKFAVTMLEKIEDSASSGHMVQNNDLHTATVTAIKNAVACCSEGGQKTILHKAFRVL 181
+V L FAV + K+E + S + +L AT+ A+K A+ CCS Q+ +L KA V+
Sbjct: 690 EVSLSFAVNIFTKMEHNTSLSLEAEGKELLGATMAAMKQAMTCCSVESQEKVLQKAIDVM 749
Query: 182 SSSTLELKDSM----SVFRWEGSNYVDSLHRVSYRDEWIISLFASVVIALHPQTHIPDIK 349
+++ +++ +F + + + +S +DEWIISLFASVVIAL PQT IP+I+
Sbjct: 750 ETNSFFFSNNLILGTDLFN-KKTQLGQTSEGLSCQDEWIISLFASVVIALRPQTQIPNIR 808
Query: 350 MLLHLFAMDLLRGHIPSAQALGSLVNKLPSRNSSLGSSHECCLEEAIDMIFSSNLWSLFK 529
+LL L AM LL GHIPSAQALGSLVNKLP L S +C L+E IDM+ + LW
Sbjct: 809 LLLQLLAMTLLEGHIPSAQALGSLVNKLP-----LNISEDCSLKELIDMLLKNVLW---- 859
Query: 530 LNNVKENPVLGVDGK----MDYSNLTVSDMNHVSARTCCAILGLAWIGKGLVMRGHERVK 697
N +G +G + SNL S +N A++GLAWIGKGL+MRGHE++K
Sbjct: 860 -----RNISIGKEGNHGDAVAMSNLRSSSLNSH------AVIGLAWIGKGLLMRGHEKLK 908
Query: 698 DITMTFLSILLQNGSTGGLLQFHNLMEGFTEQEVLSLMRSAADAFHILMSDSEACLNRKY 877
D+TMTFLS L+ N G LL F++ M+ E +V SL +SAADAFHI+MSDS+ACLNR Y
Sbjct: 909 DVTMTFLSCLVSNEDQGNLLPFNDQMKDPAELKVFSLRKSAADAFHIVMSDSDACLNRNY 968
Query: 878 HAAIRPLYKQRFYNTLMPIFASSITKSNSSIVRCMLARSFAHVVSETPLPAILNDAKMVI 1057
HA +RPLYKQRF+N +MP+F S+I K +SS RC L ++FAH+VSETPL A++ DAK V+
Sbjct: 969 HAIVRPLYKQRFFNIMMPMFLSAIAKCDSSTSRCFLYQAFAHLVSETPLVAVVGDAKKVL 1028
>ref|XP_002515963.1| DNA repair/transcription protein met18/mms19, putative [Ricinus
communis] gi|223544868|gb|EEF46383.1| DNA
repair/transcription protein met18/mms19, putative
[Ricinus communis]
Length = 1174
Score = 295 bits (756), Expect = 2e-77
Identities = 172/357 (48%), Positives = 238/357 (66%), Gaps = 5/357 (1%)
Frame = +2
Query: 2 DVPLKFAVTMLEKIED-SASSGHMVQNNDLHTATVTAIKNAVACCSEGGQKTILHKAFRV 178
+V ++F V + +IE+ +A + L A + +K+AVA CS Q I++KA+ V
Sbjct: 694 EVLMQFVVNLWNQIENFNAFTVAFHGKESLLDAIMKVMKDAVAFCSVESQNVIIYKAYGV 753
Query: 179 LSSST-LELKDSMSV--FRWEGSNYVDSLHRVSYRDEWIISLFASVVIALHPQTHIPDIK 349
LSSST L LK+S+S + E + + R+S RDEWI SLFASV+IAL PQTHIP+ +
Sbjct: 754 LSSSTFLPLKESLSENSVQLECFRAIQQMDRLSSRDEWIHSLFASVIIALRPQTHIPNTR 813
Query: 350 MLLHLFAMDLLRGHIPSAQALGSLVNKLPSRNSSLGSSHECCLEEAIDMIFSSNLWSLFK 529
++LHLF LL+GH+ +A+ALGSLVNKL +++ S +C +EEA+D+IFS NL F
Sbjct: 814 IVLHLFITALLKGHVTTAEALGSLVNKLDQKSNDACISGDCTIEEAMDIIFSINLLCSFG 873
Query: 530 LNNVKENPVLGVDGKMDYSNLTVSDMNHVSARTCCAILGLAWIGKGLVMRGHERVKDITM 709
+ +MD L + D +++ AI+GLAWIGKGL+MRGHE+VKDITM
Sbjct: 874 NGSSGRFDRTRNGDEMDLIKLCL-DAPNLAWIKIPAIVGLAWIGKGLLMRGHEKVKDITM 932
Query: 710 TFLSILLQNGSTGGLLQFHNLMEGFTEQEVL-SLMRSAADAFHILMSDSEACLNRKYHAA 886
FL+ LL +G G H +E EQ++ S+M+SA+DAF ILMSDSE CLNRKYHA
Sbjct: 933 VFLNCLLSDGEIGASPLKHGSLENNGEQDMQQSVMKSASDAFQILMSDSELCLNRKYHAI 992
Query: 887 IRPLYKQRFYNTLMPIFASSITKSNSSIVRCMLARSFAHVVSETPLPAILNDAKMVI 1057
+RPLYKQRF++++MPI ITKS+SS + +L R+FAHV+S+TPL I NDAK ++
Sbjct: 993 VRPLYKQRFFSSIMPILYPLITKSDSSFSKSLLYRAFAHVISDTPLSVISNDAKKLV 1049
>ref|XP_006426876.1| hypothetical protein CICLE_v10024743mg [Citrus clementina]
gi|557528866|gb|ESR40116.1| hypothetical protein
CICLE_v10024743mg [Citrus clementina]
Length = 1155
Score = 282 bits (721), Expect = 2e-73
Identities = 163/355 (45%), Positives = 220/355 (61%), Gaps = 3/355 (0%)
Frame = +2
Query: 2 DVPLKFAVTMLEKIEDSASSGHMVQNNDLHTATVTAIKNAVACCSEGGQKTILHKAFRVL 181
+V L+FAV + IE S + V L AT+ A+K AV CS Q + KAF VL
Sbjct: 677 EVLLRFAVNIWNLIEKSVTFSSQVHEKGLLDATMKAMKLAVGSCSVESQNIVFQKAFTVL 736
Query: 182 SSST-LELKDSMSVFRWEGSNY--VDSLHRVSYRDEWIISLFASVVIALHPQTHIPDIKM 352
S T L+D+ S + + + S R+ WI SLFASV+IA PQTHIP++++
Sbjct: 737 SLGTYFPLEDAASNIPIQLNEFQLTQETSISSSREAWICSLFASVIIAACPQTHIPNVRL 796
Query: 353 LLHLFAMDLLRGHIPSAQALGSLVNKLPSRNSSLGSSHECCLEEAIDMIFSSNLWSLFKL 532
++ LF LL+G++P+AQALGS+VNKL +++ C LEEA+D+IF S LWS
Sbjct: 797 VIRLFMTTLLKGNVPAAQALGSMVNKLGLKSNGTEVHGNCTLEEAMDIIFDSKLWSFNDS 856
Query: 533 NNVKENPVLGVDGKMDYSNLTVSDMNHVSARTCCAILGLAWIGKGLVMRGHERVKDITMT 712
++ N L + +++ N + + AI GLAWIGKGL+MRGHE+VKDITMT
Sbjct: 857 VTLRSNGGLENGSSIGLTDICRGATN-IRSLQVHAIAGLAWIGKGLLMRGHEKVKDITMT 915
Query: 713 FLSILLQNGSTGGLLQFHNLMEGFTEQEVLSLMRSAADAFHILMSDSEACLNRKYHAAIR 892
F+ LL N G +L + ++E S+++ AADAF ILM DSE CL+RK HA IR
Sbjct: 916 FIECLLSNSKLGSF----SLEQDYSENSSESVVKYAADAFKILMGDSEDCLSRKLHATIR 971
Query: 893 PLYKQRFYNTLMPIFASSITKSNSSIVRCMLARSFAHVVSETPLPAILNDAKMVI 1057
PLYKQRFY+T+MPI S I KSNSS R +L R+ AH++S+TPL +LNDAK VI
Sbjct: 972 PLYKQRFYSTIMPILQSLIIKSNSSFSRSILCRACAHIISDTPLIVVLNDAKTVI 1026
>gb|EMJ18740.1| hypothetical protein PRUPE_ppa023072mg [Prunus persica]
Length = 1158
Score = 282 bits (721), Expect = 2e-73
Identities = 162/370 (43%), Positives = 229/370 (61%), Gaps = 18/370 (4%)
Frame = +2
Query: 2 DVPLKFAVTMLEKIEDSASSGHMVQNNDLHTATVTAIKNAVACCSEGGQKTILHKAFRVL 181
+V L+F + + +E VQ +L AT+ A+K A+ CSE Q I+HKA+ V+
Sbjct: 679 EVLLRFVINIWNCVESCKDFSIQVQEEELLDATMMAMKLAIGSCSEESQNIIIHKAYSVI 738
Query: 182 SSSTL----ELKDSMSVFRWE----------GSNYVDSLHRVSYRDEWIISLFASVVIAL 319
SSS E D+ S + E S+ D + + S RDEWI+S FASV+IA+
Sbjct: 739 SSSISIPFKESLDATSSIQLEELSVSEQIDNSSHRDDQIDKFSLRDEWILSHFASVIIAV 798
Query: 320 HPQTHIPDIKMLLHLFAMDLLRGHIPSAQALGSLVNKLPSRNSSLGSSHECCLEEAIDMI 499
P+ I ++K +LHLF +L+G +P+AQALGS++NKL ++++ +S +C LEEA+DMI
Sbjct: 799 RPKAQIVNVKGILHLFMTTVLKGCVPAAQALGSVINKLGTKSNETANSIDCTLEEAVDMI 858
Query: 500 FSSNLWSLFKLNNVKENPVLGVDGKMDYSNLTVSDM----NHVSARTCCAILGLAWIGKG 667
F + LW N+ EN VL G + S + ++D+ + A++GLAWIGKG
Sbjct: 859 FRTKLW------NLNENGVLRTCGSGNGSKVGLTDLCLGFSSNKLLRVHAVVGLAWIGKG 912
Query: 668 LVMRGHERVKDITMTFLSILLQNGSTGGLLQFHNLMEGFTEQEVLSLMRSAADAFHILMS 847
L++ GHE+VKD+T L LL G + L+E EQ S+MRSAADAFHILMS
Sbjct: 913 LLLLGHEKVKDVTKILLECLLSEGRIRAMELKQGLLENSYEQH--SVMRSAADAFHILMS 970
Query: 848 DSEACLNRKYHAAIRPLYKQRFYNTLMPIFASSITKSNSSIVRCMLARSFAHVVSETPLP 1027
DSE CLNRK+HA RPLYKQRF++T+MPI S I KS+SS+ R ML R+ AH++S PL
Sbjct: 971 DSEVCLNRKFHAIARPLYKQRFFSTVMPILQSCIIKSDSSVCRSMLFRASAHLISNAPLI 1030
Query: 1028 AILNDAKMVI 1057
IL++AK ++
Sbjct: 1031 VILSEAKKLM 1040
>ref|XP_006465695.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X2 [Citrus sinensis]
Length = 1151
Score = 281 bits (719), Expect = 3e-73
Identities = 163/355 (45%), Positives = 219/355 (61%), Gaps = 3/355 (0%)
Frame = +2
Query: 2 DVPLKFAVTMLEKIEDSASSGHMVQNNDLHTATVTAIKNAVACCSEGGQKTILHKAFRVL 181
+V L+FAV + IE S + V L AT+ A+K AV CS Q + KAF VL
Sbjct: 677 EVLLRFAVNIWNLIEKSVTFSSQVHEKGLLDATMKAMKLAVGSCSVESQNIVFQKAFTVL 736
Query: 182 SSST-LELKDSMSVFRWEGSNY--VDSLHRVSYRDEWIISLFASVVIALHPQTHIPDIKM 352
S T L+D+ S + + S R+ WI SLFASV+IA PQTHIP++++
Sbjct: 737 SLGTYFPLEDAASNIPILLNEFQLTQETSISSSREAWICSLFASVIIAARPQTHIPNVRL 796
Query: 353 LLHLFAMDLLRGHIPSAQALGSLVNKLPSRNSSLGSSHECCLEEAIDMIFSSNLWSLFKL 532
++ LF LL+G++P+AQALGS+VNKL +++ C LEEA+D+IF S LWS
Sbjct: 797 VIRLFMTTLLKGNVPAAQALGSMVNKLGLKSNGTEVHGNCTLEEAMDIIFDSKLWSFNDS 856
Query: 533 NNVKENPVLGVDGKMDYSNLTVSDMNHVSARTCCAILGLAWIGKGLVMRGHERVKDITMT 712
++ N L + +++ N + + AI GLAWIGKGL+MRGHE+VKDITMT
Sbjct: 857 VTLRSNGGLENGSSIGLTDICRGATN-IRSLQVHAIAGLAWIGKGLLMRGHEKVKDITMT 915
Query: 713 FLSILLQNGSTGGLLQFHNLMEGFTEQEVLSLMRSAADAFHILMSDSEACLNRKYHAAIR 892
F+ LL N G +L + ++E S+++ AADAF ILM DSE CL+RK HA IR
Sbjct: 916 FIECLLSNSKLGSF----SLEQDYSENSSESVVKYAADAFKILMGDSEDCLSRKLHATIR 971
Query: 893 PLYKQRFYNTLMPIFASSITKSNSSIVRCMLARSFAHVVSETPLPAILNDAKMVI 1057
PLYKQRFY+T+MPI S I KSNSS R +L R+ AH++S+TPL +LNDAK VI
Sbjct: 972 PLYKQRFYSTIMPILQSLIIKSNSSFSRSILCRACAHIISDTPLIVVLNDAKTVI 1026
>ref|XP_006465694.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X1 [Citrus sinensis]
Length = 1155
Score = 281 bits (719), Expect = 3e-73
Identities = 163/355 (45%), Positives = 219/355 (61%), Gaps = 3/355 (0%)
Frame = +2
Query: 2 DVPLKFAVTMLEKIEDSASSGHMVQNNDLHTATVTAIKNAVACCSEGGQKTILHKAFRVL 181
+V L+FAV + IE S + V L AT+ A+K AV CS Q + KAF VL
Sbjct: 677 EVLLRFAVNIWNLIEKSVTFSSQVHEKGLLDATMKAMKLAVGSCSVESQNIVFQKAFTVL 736
Query: 182 SSST-LELKDSMSVFRWEGSNY--VDSLHRVSYRDEWIISLFASVVIALHPQTHIPDIKM 352
S T L+D+ S + + S R+ WI SLFASV+IA PQTHIP++++
Sbjct: 737 SLGTYFPLEDAASNIPILLNEFQLTQETSISSSREAWICSLFASVIIAARPQTHIPNVRL 796
Query: 353 LLHLFAMDLLRGHIPSAQALGSLVNKLPSRNSSLGSSHECCLEEAIDMIFSSNLWSLFKL 532
++ LF LL+G++P+AQALGS+VNKL +++ C LEEA+D+IF S LWS
Sbjct: 797 VIRLFMTTLLKGNVPAAQALGSMVNKLGLKSNGTEVHGNCTLEEAMDIIFDSKLWSFNDS 856
Query: 533 NNVKENPVLGVDGKMDYSNLTVSDMNHVSARTCCAILGLAWIGKGLVMRGHERVKDITMT 712
++ N L + +++ N + + AI GLAWIGKGL+MRGHE+VKDITMT
Sbjct: 857 VTLRSNGGLENGSSIGLTDICRGATN-IRSLQVHAIAGLAWIGKGLLMRGHEKVKDITMT 915
Query: 713 FLSILLQNGSTGGLLQFHNLMEGFTEQEVLSLMRSAADAFHILMSDSEACLNRKYHAAIR 892
F+ LL N G +L + ++E S+++ AADAF ILM DSE CL+RK HA IR
Sbjct: 916 FIECLLSNSKLGSF----SLEQDYSENSSESVVKYAADAFKILMGDSEDCLSRKLHATIR 971
Query: 893 PLYKQRFYNTLMPIFASSITKSNSSIVRCMLARSFAHVVSETPLPAILNDAKMVI 1057
PLYKQRFY+T+MPI S I KSNSS R +L R+ AH++S+TPL +LNDAK VI
Sbjct: 972 PLYKQRFYSTIMPILQSLIIKSNSSFSRSILCRACAHIISDTPLIVVLNDAKTVI 1026
>ref|XP_006385450.1| hypothetical protein POPTR_0003s04720g [Populus trichocarpa]
gi|550342418|gb|ERP63247.1| hypothetical protein
POPTR_0003s04720g [Populus trichocarpa]
Length = 913
Score = 274 bits (700), Expect = 5e-71
Identities = 168/356 (47%), Positives = 225/356 (63%), Gaps = 4/356 (1%)
Frame = +2
Query: 2 DVPLKFAVTMLEKIEDSASSGHMVQNNDLHTATVTAIKNAVACCSEGGQKTILHKAFRVL 181
+V L+F V++ +IE+ + + +L AT+ +K AVA CS Q I+ KA+ VL
Sbjct: 446 EVLLQFVVSIWNQIENCMAFPDGIFEKELLDATMKVMKLAVASCSVESQNIIIDKAYTVL 505
Query: 182 SSST-LELKDSMSVFRWEGSNYVDS--LHRVSYRDEWIISLFASVVIALHPQTHIPDIKM 352
SSST L KDS+S + + D+ ++ S RDEWI SLF SV+IALHPQT IP+I+
Sbjct: 506 SSSTFLSTKDSLSSLQAQLEELEDTQETNKFSSRDEWIHSLFISVIIALHPQTRIPNIRT 565
Query: 353 LLHLFAMDLLRGHIPSAQALGSLVNKLPSRNSSLGSSHECCLEEAIDMIFSSNLWSLFKL 532
+LH + L+G++ +AQALGSLVNKL + S S C EEA+D+IF NL S +
Sbjct: 566 VLHFLMIVFLKGYVTAAQALGSLVNKLDLKTSGTEYSGGCTFEEAMDIIFGKNLSSSDHV 625
Query: 533 NNVKENPVLGVDGKMDYSNLTVSDMNHVSARTCCAILGLAWIGKGLVMRGHERVKDITMT 712
+ + + G + +NL + N +I+GLAWIGKGL+MRGHE+VKDIT+
Sbjct: 626 SAGRSG-ITGYWSETGLTNLCLGAANS-GLLEIHSIVGLAWIGKGLLMRGHEKVKDITIV 683
Query: 713 FLSILLQNGSTGGLLQFHNLMEGFTEQEV-LSLMRSAADAFHILMSDSEACLNRKYHAAI 889
FL L NG G L L E ++ LS M+ AADAF +LMSDSE CLNRK+HA I
Sbjct: 684 FLECLQSNGRRGAL----PLEENNCNWDMRLSAMKCAADAFQVLMSDSELCLNRKFHAII 739
Query: 890 RPLYKQRFYNTLMPIFASSITKSNSSIVRCMLARSFAHVVSETPLPAILNDAKMVI 1057
RPLYKQRF++T+MPI S I +S+S + R ML R+FA+VV TPL ILNDAK +I
Sbjct: 740 RPLYKQRFFSTIMPILQSLIIQSDSLLSRSMLYRAFANVVIGTPLIVILNDAKKLI 795
>ref|XP_004302857.1| PREDICTED: uncharacterized protein LOC101304108 [Fragaria vesca
subsp. vesca]
Length = 1149
Score = 267 bits (683), Expect = 5e-69
Identities = 161/360 (44%), Positives = 228/360 (63%), Gaps = 8/360 (2%)
Frame = +2
Query: 2 DVPLKFAVTMLEKIEDSASSGHMVQNNDLHTATVTAIKNAVACCSEGGQKTILHKAFRVL 181
+V +F +++ +E S + VQ+ L AT+TA+K AV CSE Q I+ KA+ L
Sbjct: 679 EVLCRFVISIWNCLERCKDSSNQVQDKGLLDATMTAMKLAVGSCSEESQNIIIQKAYGAL 738
Query: 182 SSS-TLELKDSM---SVFRWEGSNYVDSLHRVSYRDEWIISLFASVVIALHPQTHIPDIK 349
SS ++ KDS S+ + E + + L ++S RDEWI SLFASV+IA+ P+T I + K
Sbjct: 739 SSGISIPFKDSTDDSSLAKLETLHLFEQLDKLSPRDEWIFSLFASVIIAMRPRTPIANAK 798
Query: 350 MLLHLFAMDLLRGHIPSAQALGSLVNKLPSRNSSLGSSHECCLEEAIDMIFSSNLWSLFK 529
+LHLF L++G P+AQALGS++NKL +++ + S C LEEA+ +IF S LW
Sbjct: 799 GILHLFMTALVKGCTPAAQALGSVINKLGIQSNEITISTACTLEEAMGIIFRSKLW---- 854
Query: 530 LNNVKENPVLGVDGKMDYSNLTVSDMN-HVSARTCC---AILGLAWIGKGLVMRGHERVK 697
N+ EN VL G N+ ++++ VS+ I GLAWIGKGL++ G+E+VK
Sbjct: 855 --NIGENGVLRGSGTSHSRNVGLTELCLGVSSNKLLQVHVITGLAWIGKGLLLIGNEQVK 912
Query: 698 DITMTFLSILLQNGSTGGLLQFHNLMEGFTEQEVLSLMRSAADAFHILMSDSEACLNRKY 877
D+T L LL + L+E +EQ S+MR+AADAFHILMSDS+ CLNRK+
Sbjct: 913 DVTKIILDCLLADDKVDTSELRQGLLETSSEQP--SVMRTAADAFHILMSDSDVCLNRKF 970
Query: 878 HAAIRPLYKQRFYNTLMPIFASSITKSNSSIVRCMLARSFAHVVSETPLPAILNDAKMVI 1057
HA IRPLYKQRF++T+MPI S I KS+SS+ R ML R+ AH++S PL IL++AK ++
Sbjct: 971 HANIRPLYKQRFFSTVMPILHSLIVKSDSSLSRSMLFRASAHLISNAPLIVILSEAKKLM 1030
>gb|ESW22599.1| hypothetical protein PHAVU_005G166100g [Phaseolus vulgaris]
Length = 1145
Score = 267 bits (682), Expect = 6e-69
Identities = 159/361 (44%), Positives = 228/361 (63%), Gaps = 9/361 (2%)
Frame = +2
Query: 2 DVPLKFAVTMLEKIEDSASSGHMVQNNDLHTATVTAIKNAVACCSEGGQKTILHKAFRVL 181
D L+FAV + + + S + L A + A+K +V CS Q I+ KA+ +L
Sbjct: 677 DFALQFAVDIWSQAGNCMVSSTSFEEKGLLYALMKAMKLSVGICSVESQNLIIQKAYSIL 736
Query: 182 SSST-LELKDSMSVFRWEGSNYVDSLHRVSYRDEWIISLFASVVIALHPQTHIPDIKMLL 358
SS T +LK+ + G + +S DEWIISLFASVVIA+ P+T IP+I++L+
Sbjct: 737 SSRTNFQLKELERLPLSPGK------YNISLTDEWIISLFASVVIAVCPKTLIPNIRVLV 790
Query: 359 HLFAMDLLRGHIPSAQALGSLVNKLPSRNSSLGSSHECCLEEAIDMIFSSNLWS-----L 523
+LF + LLRG +P AQALGSL+NKL S ++S +S + LEEA+D IF++ +W L
Sbjct: 791 NLFIVTLLRGIVPVAQALGSLLNKLVSTSNSAENSSDITLEEALDAIFNTKIWFSSIDIL 850
Query: 524 FKLNNVKENP-VLGVDGKMDYSNLTVSDMNHVSARTCCAILGLAWIGKGLVMRGHERVKD 700
+ N ++ D + ++N + +N AI GL+WIGKGL++RGHE +KD
Sbjct: 851 QRCNGTSNGKEIVLTDICLGFANDKLLQIN--------AICGLSWIGKGLLLRGHEGIKD 902
Query: 701 ITMTFLSILLQNGSTGGLLQFHNLMEGFTEQEVLS--LMRSAADAFHILMSDSEACLNRK 874
ITMTF+ L+ T L F G TE+++ +M+SAADAFH+LMSDSE CLN+K
Sbjct: 903 ITMTFIECLIPG--TKSSLPFFKDSLGNTEEQIQDPLVMKSAADAFHVLMSDSEVCLNKK 960
Query: 875 YHAAIRPLYKQRFYNTLMPIFASSITKSNSSIVRCMLARSFAHVVSETPLPAILNDAKMV 1054
+HA IRPLYKQRF++++MPIF ITK+ SS+ R L R+ AH++S+TP+ A+LNDAK +
Sbjct: 961 FHATIRPLYKQRFFSSMMPIFLQLITKAYSSLSRSFLYRALAHIISDTPMVAVLNDAKKL 1020
Query: 1055 I 1057
I
Sbjct: 1021 I 1021
>gb|EOY26936.1| MMS19 nucleotide excision repair protein, putative isoform 5
[Theobroma cacao]
Length = 1157
Score = 265 bits (678), Expect = 2e-68
Identities = 169/362 (46%), Positives = 232/362 (64%), Gaps = 10/362 (2%)
Frame = +2
Query: 2 DVPLKFAVTMLEKIEDSASSGHMVQNNDLHTATVT--AIKNAVACCSEGGQKTILHKAFR 175
+VPL+FA+ + +IE S + Q N + V A+K AVA CSE Q I+ K++
Sbjct: 678 EVPLQFAIHIWNQIELSMVF-NATQTNKIEVLDVMMKAMKLAVASCSEENQNIIVQKSYH 736
Query: 176 VLSSST-LELKDSMSVFRWEGSNYVDSLHRVSYRDEWIISLFASVVIALHPQTHIPDIKM 352
+LSSST LK+ +FR E V + S RDEWI+SLFA+VVIA+HP+T++P+IK
Sbjct: 737 ILSSSTSFPLKE---LFRQESFQIVQ-VDNSSSRDEWILSLFAAVVIAVHPETYVPNIKP 792
Query: 353 LLHLFAMDLLRGHIPSAQALGSLVNKLPSRNSSLGSSHECCLEEAIDMIFSSNLWSLFKL 532
LL+LF LL+G++ +AQALGS+VNKL S G +C LEE +D+I + +LW +F
Sbjct: 793 LLYLFMTTLLKGNVVTAQALGSVVNKLGL--ESAGVQTDCTLEEVMDIILNLSLW-IFHS 849
Query: 533 NNVKENPVLGVDGKMDYSNLTVSDMNHVSARTCC------AILGLAWIGKGLVMRGHERV 694
N+ + + KM ++ +S +N S+ C AI+GLAWIGKGL+MRGHE+V
Sbjct: 850 NSSAD-----IQAKMTSAH-DISLINLCSSIGSCTSLQIHAIVGLAWIGKGLLMRGHEKV 903
Query: 695 KDITMTFLSILLQNGSTGGLLQFHNLMEGFTEQEV-LSLMRSAADAFHILMSDSEACLNR 871
KDITM FL L NG L Q + E E ++ S+M+SAADAF ILM DSE CLNR
Sbjct: 904 KDITMIFLRCLQPNGRAEILHQEEGISESNNELDLHHSVMKSAADAFQILMGDSEVCLNR 963
Query: 872 KYHAAIRPLYKQRFYNTLMPIFASSITKSNSSIVRCMLARSFAHVVSETPLPAILNDAKM 1051
+HA IRPLYKQRF++T+MPI S I KS + R +L R+ AH++ +TPL +L+DAK
Sbjct: 964 GFHAVIRPLYKQRFFSTMMPILQSLIMKS-EPLSRPLLLRASAHIIVDTPLIVVLSDAKK 1022
Query: 1052 VI 1057
+I
Sbjct: 1023 II 1024
>gb|EOY26935.1| MMS19 nucleotide excision repair protein, putative isoform 4
[Theobroma cacao]
Length = 1136
Score = 265 bits (678), Expect = 2e-68
Identities = 169/362 (46%), Positives = 232/362 (64%), Gaps = 10/362 (2%)
Frame = +2
Query: 2 DVPLKFAVTMLEKIEDSASSGHMVQNNDLHTATVT--AIKNAVACCSEGGQKTILHKAFR 175
+VPL+FA+ + +IE S + Q N + V A+K AVA CSE Q I+ K++
Sbjct: 678 EVPLQFAIHIWNQIELSMVF-NATQTNKIEVLDVMMKAMKLAVASCSEENQNIIVQKSYH 736
Query: 176 VLSSST-LELKDSMSVFRWEGSNYVDSLHRVSYRDEWIISLFASVVIALHPQTHIPDIKM 352
+LSSST LK+ +FR E V + S RDEWI+SLFA+VVIA+HP+T++P+IK
Sbjct: 737 ILSSSTSFPLKE---LFRQESFQIVQ-VDNSSSRDEWILSLFAAVVIAVHPETYVPNIKP 792
Query: 353 LLHLFAMDLLRGHIPSAQALGSLVNKLPSRNSSLGSSHECCLEEAIDMIFSSNLWSLFKL 532
LL+LF LL+G++ +AQALGS+VNKL S G +C LEE +D+I + +LW +F
Sbjct: 793 LLYLFMTTLLKGNVVTAQALGSVVNKLGL--ESAGVQTDCTLEEVMDIILNLSLW-IFHS 849
Query: 533 NNVKENPVLGVDGKMDYSNLTVSDMNHVSARTCC------AILGLAWIGKGLVMRGHERV 694
N+ + + KM ++ +S +N S+ C AI+GLAWIGKGL+MRGHE+V
Sbjct: 850 NSSAD-----IQAKMTSAH-DISLINLCSSIGSCTSLQIHAIVGLAWIGKGLLMRGHEKV 903
Query: 695 KDITMTFLSILLQNGSTGGLLQFHNLMEGFTEQEV-LSLMRSAADAFHILMSDSEACLNR 871
KDITM FL L NG L Q + E E ++ S+M+SAADAF ILM DSE CLNR
Sbjct: 904 KDITMIFLRCLQPNGRAEILHQEEGISESNNELDLHHSVMKSAADAFQILMGDSEVCLNR 963
Query: 872 KYHAAIRPLYKQRFYNTLMPIFASSITKSNSSIVRCMLARSFAHVVSETPLPAILNDAKM 1051
+HA IRPLYKQRF++T+MPI S I KS + R +L R+ AH++ +TPL +L+DAK
Sbjct: 964 GFHAVIRPLYKQRFFSTMMPILQSLIMKS-EPLSRPLLLRASAHIIVDTPLIVVLSDAKK 1022
Query: 1052 VI 1057
+I
Sbjct: 1023 II 1024
>gb|EOY26934.1| MMS19 nucleotide excision repair protein, putative isoform 3
[Theobroma cacao]
Length = 1062
Score = 265 bits (678), Expect = 2e-68
Identities = 169/362 (46%), Positives = 232/362 (64%), Gaps = 10/362 (2%)
Frame = +2
Query: 2 DVPLKFAVTMLEKIEDSASSGHMVQNNDLHTATVT--AIKNAVACCSEGGQKTILHKAFR 175
+VPL+FA+ + +IE S + Q N + V A+K AVA CSE Q I+ K++
Sbjct: 678 EVPLQFAIHIWNQIELSMVF-NATQTNKIEVLDVMMKAMKLAVASCSEENQNIIVQKSYH 736
Query: 176 VLSSST-LELKDSMSVFRWEGSNYVDSLHRVSYRDEWIISLFASVVIALHPQTHIPDIKM 352
+LSSST LK+ +FR E V + S RDEWI+SLFA+VVIA+HP+T++P+IK
Sbjct: 737 ILSSSTSFPLKE---LFRQESFQIVQ-VDNSSSRDEWILSLFAAVVIAVHPETYVPNIKP 792
Query: 353 LLHLFAMDLLRGHIPSAQALGSLVNKLPSRNSSLGSSHECCLEEAIDMIFSSNLWSLFKL 532
LL+LF LL+G++ +AQALGS+VNKL S G +C LEE +D+I + +LW +F
Sbjct: 793 LLYLFMTTLLKGNVVTAQALGSVVNKLGL--ESAGVQTDCTLEEVMDIILNLSLW-IFHS 849
Query: 533 NNVKENPVLGVDGKMDYSNLTVSDMNHVSARTCC------AILGLAWIGKGLVMRGHERV 694
N+ + + KM ++ +S +N S+ C AI+GLAWIGKGL+MRGHE+V
Sbjct: 850 NSSAD-----IQAKMTSAH-DISLINLCSSIGSCTSLQIHAIVGLAWIGKGLLMRGHEKV 903
Query: 695 KDITMTFLSILLQNGSTGGLLQFHNLMEGFTEQEV-LSLMRSAADAFHILMSDSEACLNR 871
KDITM FL L NG L Q + E E ++ S+M+SAADAF ILM DSE CLNR
Sbjct: 904 KDITMIFLRCLQPNGRAEILHQEEGISESNNELDLHHSVMKSAADAFQILMGDSEVCLNR 963
Query: 872 KYHAAIRPLYKQRFYNTLMPIFASSITKSNSSIVRCMLARSFAHVVSETPLPAILNDAKM 1051
+HA IRPLYKQRF++T+MPI S I KS + R +L R+ AH++ +TPL +L+DAK
Sbjct: 964 GFHAVIRPLYKQRFFSTMMPILQSLIMKS-EPLSRPLLLRASAHIIVDTPLIVVLSDAKK 1022
Query: 1052 VI 1057
+I
Sbjct: 1023 II 1024
>gb|EOY26932.1| MMS19 nucleotide excision repair protein, putative isoform 1
[Theobroma cacao] gi|508779677|gb|EOY26933.1| MMS19
nucleotide excision repair protein, putative isoform 1
[Theobroma cacao]
Length = 1149
Score = 265 bits (678), Expect = 2e-68
Identities = 169/362 (46%), Positives = 232/362 (64%), Gaps = 10/362 (2%)
Frame = +2
Query: 2 DVPLKFAVTMLEKIEDSASSGHMVQNNDLHTATVT--AIKNAVACCSEGGQKTILHKAFR 175
+VPL+FA+ + +IE S + Q N + V A+K AVA CSE Q I+ K++
Sbjct: 678 EVPLQFAIHIWNQIELSMVF-NATQTNKIEVLDVMMKAMKLAVASCSEENQNIIVQKSYH 736
Query: 176 VLSSST-LELKDSMSVFRWEGSNYVDSLHRVSYRDEWIISLFASVVIALHPQTHIPDIKM 352
+LSSST LK+ +FR E V + S RDEWI+SLFA+VVIA+HP+T++P+IK
Sbjct: 737 ILSSSTSFPLKE---LFRQESFQIVQ-VDNSSSRDEWILSLFAAVVIAVHPETYVPNIKP 792
Query: 353 LLHLFAMDLLRGHIPSAQALGSLVNKLPSRNSSLGSSHECCLEEAIDMIFSSNLWSLFKL 532
LL+LF LL+G++ +AQALGS+VNKL S G +C LEE +D+I + +LW +F
Sbjct: 793 LLYLFMTTLLKGNVVTAQALGSVVNKLGL--ESAGVQTDCTLEEVMDIILNLSLW-IFHS 849
Query: 533 NNVKENPVLGVDGKMDYSNLTVSDMNHVSARTCC------AILGLAWIGKGLVMRGHERV 694
N+ + + KM ++ +S +N S+ C AI+GLAWIGKGL+MRGHE+V
Sbjct: 850 NSSAD-----IQAKMTSAH-DISLINLCSSIGSCTSLQIHAIVGLAWIGKGLLMRGHEKV 903
Query: 695 KDITMTFLSILLQNGSTGGLLQFHNLMEGFTEQEV-LSLMRSAADAFHILMSDSEACLNR 871
KDITM FL L NG L Q + E E ++ S+M+SAADAF ILM DSE CLNR
Sbjct: 904 KDITMIFLRCLQPNGRAEILHQEEGISESNNELDLHHSVMKSAADAFQILMGDSEVCLNR 963
Query: 872 KYHAAIRPLYKQRFYNTLMPIFASSITKSNSSIVRCMLARSFAHVVSETPLPAILNDAKM 1051
+HA IRPLYKQRF++T+MPI S I KS + R +L R+ AH++ +TPL +L+DAK
Sbjct: 964 GFHAVIRPLYKQRFFSTMMPILQSLIMKS-EPLSRPLLLRASAHIIVDTPLIVVLSDAKK 1022
Query: 1052 VI 1057
+I
Sbjct: 1023 II 1024
>ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Cucumis
sativus]
Length = 1147
Score = 263 bits (673), Expect = 7e-68
Identities = 153/360 (42%), Positives = 229/360 (63%), Gaps = 8/360 (2%)
Frame = +2
Query: 2 DVPLKFAVTMLEKIEDSASSGHMVQN--NDLHTATVTAIKNAVACCSEGGQKTILHKAFR 175
+V L+FA+ + ++IE ++ + L AT+ A+K +V CS+ Q I+ KAF
Sbjct: 672 EVILRFALNIWDQIEKCSTFSTSMDKCIQVLLDATMMALKLSVRSCSKESQNIIVQKAFN 731
Query: 176 VLSSSTLE-LKDSMS---VFRWEGSNYVDSLHRVSYRDEWIISLFASVVIALHPQTHIPD 343
VL +S+ LK ++S + EG ++ + RDEWI+SLFASV IAL PQ H+PD
Sbjct: 732 VLLTSSFSPLKVTLSNTIPVQMEGLQFLQQKDNPTSRDEWILSLFASVTIALRPQVHVPD 791
Query: 344 IKMLLHLFAMDLLRGHIPSAQALGSLVNKLPSRNSSLGSSHECCLEEAIDMIFSSNLWSL 523
+++++ L + RG +P+AQALGS++NKL ++ + S LEEAID+IF + L
Sbjct: 792 VRLIIRLLMLSTTRGCVPAAQALGSMINKLSVKSDKVEVSSYVSLEEAIDIIFKTEFRCL 851
Query: 524 FKLNNVKENPVLGVDGKMDYSNLTVSDMNHVSARTCCAILGLAWIGKGLVMRGHERVKDI 703
N G +M ++L S + S A++GL+WIGKGL++ GH++V+DI
Sbjct: 852 -------HNESTGDGSEMFLTDLC-SSIEKSSLLQVHAVVGLSWIGKGLLLCGHDKVRDI 903
Query: 704 TMTFLSILLQNGSTGG--LLQFHNLMEGFTEQEVLSLMRSAADAFHILMSDSEACLNRKY 877
TM FL +L+ T L QF + T + ++M+ AA+AFHILMSDSEACLNRK+
Sbjct: 904 TMVFLQLLVSKSRTDASPLQQFKLEKDNETSLD-FAVMKGAAEAFHILMSDSEACLNRKF 962
Query: 878 HAAIRPLYKQRFYNTLMPIFASSITKSNSSIVRCMLARSFAHVVSETPLPAILNDAKMVI 1057
HA +RPLYKQRF++T+MPIF + ++KS++S+ R ML +++AHV+S+TPL AIL+DAK I
Sbjct: 963 HAIVRPLYKQRFFSTMMPIFQTLVSKSDTSLSRYMLYQAYAHVISDTPLTAILSDAKKFI 1022
>gb|EXB74582.1| hypothetical protein L484_026279 [Morus notabilis]
Length = 1210
Score = 260 bits (664), Expect = 7e-67
Identities = 150/358 (41%), Positives = 220/358 (61%), Gaps = 6/358 (1%)
Frame = +2
Query: 2 DVPLKFAVTMLEKIEDSASSGHMVQNNDLHTATVTAIKNAVACCSEGGQKTILHKAFRVL 181
++ L+FA + + +E S VQ L A + A+K V CSE Q IL KA+ VL
Sbjct: 709 EILLRFATNIWDHVESWISCNVEVQEKGLLDAIMMAMKLTVGSCSEEIQYIILQKAYTVL 768
Query: 182 SSSTLELKDSMSV----FRWEGSNYVDSLHRVSYRDEWIISLFASVVIALHPQTHIPDIK 349
SS+T L S+ + E S + + +S+RDE ++SLFASV+IA+ P+T IP++K
Sbjct: 769 SSNTSLLLKKSSLTSIPVQLEESQLIQHVDNISHRDELVLSLFASVIIAVRPRTEIPNMK 828
Query: 350 MLLHLFAMDLLRGHIPSAQALGSLVNKLPSRNSSLGSSHECCLEEAIDMIFSSNLWSLFK 529
+L+LF LLRGH+PSAQALGS++NK ++ S S E LE+A+D+IF + W
Sbjct: 829 EILYLFLTTLLRGHVPSAQALGSMINKFDTKAKSTEISRESTLEDAMDIIFKTKSWFF-- 886
Query: 530 LNNVKENPVLGVDGK-MDYSNLTVSDMNHVSARTCCAILGLAWIGKGLVMRGHERVKDIT 706
++N VL +G M +L + MN++ + AI+GLAWIGKGL++RGHE+VKD+
Sbjct: 887 ----RDNEVLQRNGNGMGLKDLCLGLMNNIQLQV-HAIVGLAWIGKGLLLRGHEKVKDVI 941
Query: 707 MTFLSILLQNGSTGGLLQFHNLMEGFTEQEV-LSLMRSAADAFHILMSDSEACLNRKYHA 883
MT L L+ + ST + E EQ+ S+ RSAADAFHILMSDS CLN+ +HA
Sbjct: 942 MTLLECLMPDSSTRAAKLKQDSFENILEQDFHPSVRRSAADAFHILMSDSGVCLNKIFHA 1001
Query: 884 AIRPLYKQRFYNTLMPIFASSITKSNSSIVRCMLARSFAHVVSETPLPAILNDAKMVI 1057
IRPLYKQ ++ +MP+ S + + S R ML R+ H++++ PL ++++AK +I
Sbjct: 1002 IIRPLYKQHLFSVVMPLLQSLLKNFDPSFSRSMLYRASVHIIADAPLIVVVSEAKKLI 1059
>ref|XP_004155994.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Cucumis
sativus]
Length = 914
Score = 256 bits (653), Expect = 1e-65
Identities = 150/356 (42%), Positives = 223/356 (62%), Gaps = 4/356 (1%)
Frame = +2
Query: 2 DVPLKFAVTMLEKIEDSASSGHMVQNNDLHTATVTAIKNAVACCSEGGQKTILHKAFRVL 181
+V L+FA+ + ++IE S+ + L AT+ A+K +V CS+ Q I+ KAF VL
Sbjct: 459 EVILRFALNIWDQIE-KCSTFSTSMDKVLLDATMMALKLSVRSCSKESQNIIVQKAFNVL 517
Query: 182 SSSTLE-LKDSMSV---FRWEGSNYVDSLHRVSYRDEWIISLFASVVIALHPQTHIPDIK 349
+S+ LK ++S + EG ++ + RDEWI+SLFASV IAL PQ H+PD++
Sbjct: 518 LASSFSPLKVALSTTIPVQMEGLQFLQQKDNPTSRDEWILSLFASVTIALRPQVHVPDVR 577
Query: 350 MLLHLFAMDLLRGHIPSAQALGSLVNKLPSRNSSLGSSHECCLEEAIDMIFSSNLWSLFK 529
+++ L + RG +P+AQALGS++NKL ++ + S LEEAID+IF + L
Sbjct: 578 LIIRLLMLSTTRGCVPAAQALGSMINKLSVKSDKVEVSSYVSLEEAIDIIFKTEFRCL-- 635
Query: 530 LNNVKENPVLGVDGKMDYSNLTVSDMNHVSARTCCAILGLAWIGKGLVMRGHERVKDITM 709
N G +M ++L S + S A++GL+WIGKGL++ GH++V+DITM
Sbjct: 636 -----HNESTGDGSEMFLTDL-CSSIEKSSLLQVHAVVGLSWIGKGLLLCGHDKVRDITM 689
Query: 710 TFLSILLQNGSTGGLLQFHNLMEGFTEQEVLSLMRSAADAFHILMSDSEACLNRKYHAAI 889
FL +L+ + L ++M+ AA+AFHILMSDSEACLNRK+HA +
Sbjct: 690 VFLQLLVSKNNETSL--------------DFAVMKGAAEAFHILMSDSEACLNRKFHAIV 735
Query: 890 RPLYKQRFYNTLMPIFASSITKSNSSIVRCMLARSFAHVVSETPLPAILNDAKMVI 1057
RPLYKQRF++T+MPIF + ++KS++S R ML +++AHV+S+TPL AIL+DAK I
Sbjct: 736 RPLYKQRFFSTMMPIFQTLVSKSDTS--RYMLYQAYAHVISDTPLTAILSDAKKFI 789
>ref|XP_003597674.1| MMS19 nucleotide excision repair protein-like protein [Medicago
truncatula] gi|355486722|gb|AES67925.1| MMS19 nucleotide
excision repair protein-like protein [Medicago
truncatula]
Length = 1140
Score = 256 bits (653), Expect = 1e-65
Identities = 148/355 (41%), Positives = 222/355 (62%), Gaps = 6/355 (1%)
Frame = +2
Query: 11 LKFAVTMLEKIEDSASSGHMVQNNDLHTATVTAIKNAVACCSEGGQKTILHKAFRVLSSS 190
++FAV + + + ++ L A + A+K +V CCS Q + KA+ LSS
Sbjct: 672 VQFAVDIWNQAGNCMDFNSPFEDKGLLDAMMKAMKVSVGCCSVESQNVTIQKAYSTLSSH 731
Query: 191 T-LELKDSMSVFRWEGSNYVDSLHRVSYRDEWIISLFASVVIALHPQTHIPDIKMLLHLF 367
T +L D + G + +S RDE I+ LFASV+IAL P+THIP+I+ LLHLF
Sbjct: 732 TKFQLNDVGRLPLTSGK------YDISPRDEGILLLFASVIIALRPKTHIPNIRGLLHLF 785
Query: 368 AMDLLRGHIPSAQALGSLVNKLPSRNSSLGSSHECCLEEAIDMIFSSNLWSLFKLNNVKE 547
+ LL+G +P AQALGS++NKL S+++ S E LEEA+D+IF++ +W F NN+ +
Sbjct: 786 IITLLKGVVPVAQALGSMLNKLTSKSNGAEKSDELTLEEALDIIFNTKIW--FSSNNMLQ 843
Query: 548 NPVLGVDGKMDYSNLTVSDM----NHVSARTCCAILGLAWIGKGLVMRGHERVKDITMTF 715
+G + S++ ++D+ + AI GL+WIGKGL++RGHE++KDITM F
Sbjct: 844 I----YNGSSNGSDIVLTDLCLGITNDRLLQSNAICGLSWIGKGLLLRGHEKIKDITMIF 899
Query: 716 LSILLQNGSTGGLLQFHNLMEGFTEQEVLSLMRSAA-DAFHILMSDSEACLNRKYHAAIR 892
L+ + + +E +Q+ L R A +AFH+LMSD+E CLNRK+HA +R
Sbjct: 900 TECLISDRRKTSVPLVEGSLENTEKQKCDPLARKCATEAFHVLMSDAEDCLNRKFHATVR 959
Query: 893 PLYKQRFYNTLMPIFASSITKSNSSIVRCMLARSFAHVVSETPLPAILNDAKMVI 1057
PLYKQRF++++MPIF I++S+S + R +L R+FAHV+S+TPL ILN+AK +I
Sbjct: 960 PLYKQRFFSSMMPIFLQLISRSDSLLSRSLLLRAFAHVMSDTPLIVILNEAKKLI 1014
>ref|XP_006597169.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X4 [Glycine max]
Length = 1095
Score = 250 bits (638), Expect = 8e-64
Identities = 149/359 (41%), Positives = 224/359 (62%), Gaps = 7/359 (1%)
Frame = +2
Query: 2 DVPLKFAVTMLEKIEDSASSGHMVQNNDLHTATVTAIKNAVACCSEGGQKTILHKAFRVL 181
D ++FAV + + + + L A + A++ +V CS Q I+ KA+ VL
Sbjct: 634 DFVMQFAVDIWSQAGNCMDLSTPFEGKGLLDAMMKAMRLSVGSCSVESQNLIIRKAYSVL 693
Query: 182 SSST-LELKDSMSVFRWEGSNYVDSLHRVSYRDEWIISLFASVVIALHPQTHIPDIKMLL 358
SS T +LK+ + G + +S RDE IISLFASVVIA+ P+T+IP+I++L+
Sbjct: 694 SSHTNFQLKEVERLPLTPGK------YDISLRDEGIISLFASVVIAVCPKTYIPNIRVLV 747
Query: 359 HLFAMDLLRGHIPSAQALGSLVNKLPSRNSSLGSSHECCLEEAIDMIFSSNLW-----SL 523
HLF + LLRG +P AQALGS++NKL S +S+ +S + LEEA+D IF++ + L
Sbjct: 748 HLFIITLLRGVVPVAQALGSILNKLVSTSSTAENSSDLTLEEALDAIFNTKISFSSTDML 807
Query: 524 FKLNNVKE-NPVLGVDGKMDYSNLTVSDMNHVSARTCCAILGLAWIGKGLVMRGHERVKD 700
+ N N ++ D + +N + +N AI GL+W+GKGL++RGHE++KD
Sbjct: 808 QRCNGTSNGNEMVFTDICLGIANDRMLQIN--------AICGLSWMGKGLLLRGHEKIKD 859
Query: 701 ITMTFLSILLQNGSTGGLLQFHNLMEGFTEQEVLSLMRSAADAFHILMSDSEACLNRKYH 880
ITM F+ L+ + L +L + + L +++ A DAFH+LMSDSE CLNRK+H
Sbjct: 860 ITMIFMECLISGTKSASPLIKDSLENTEEQIQDLLVIKCATDAFHVLMSDSEVCLNRKFH 919
Query: 881 AAIRPLYKQRFYNTLMPIFASSITKSNSSIVRCMLARSFAHVVSETPLPAILNDAKMVI 1057
A IRPLYKQRF++++MPI ITKS+SS+ R L R+FAH++S+TP+ AI+++AK +I
Sbjct: 920 ATIRPLYKQRFFSSVMPILQQIITKSHSSLSRSFLYRAFAHIMSDTPMVAIVSEAKKLI 978