BLASTX nr result
ID: Catharanthus23_contig00019684
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00019684
(410 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor... 155 7e-36
emb|CBI31157.3| unnamed protein product [Vitis vinifera] 155 7e-36
ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor... 155 7e-36
emb|CAN82460.1| hypothetical protein VITISV_005515 [Vitis vinifera] 155 7e-36
ref|XP_004296476.1| PREDICTED: probable pre-mRNA-splicing factor... 152 3e-35
gb|EXB44282.1| putative pre-mRNA-splicing factor ATP-dependent R... 152 4e-35
ref|XP_004306870.1| PREDICTED: probable pre-mRNA-splicing factor... 151 8e-35
gb|EMJ14920.1| hypothetical protein PRUPE_ppa000417mg [Prunus pe... 151 1e-34
ref|XP_002318357.2| ATP-dependent RNA helicase family protein [P... 149 4e-34
ref|XP_006466902.1| PREDICTED: probable pre-mRNA-splicing factor... 148 8e-34
ref|XP_006425547.1| hypothetical protein CICLE_v10024740mg [Citr... 148 8e-34
ref|XP_006374312.1| ATP-dependent RNA helicase family protein [P... 147 1e-33
ref|XP_002331832.1| predicted protein [Populus trichocarpa] 147 1e-33
gb|EOY14972.1| Pre-mRNA-splicing factor ATP-dependent RNA helica... 147 1e-33
ref|XP_004243751.1| PREDICTED: probable pre-mRNA-splicing factor... 143 2e-32
ref|XP_004498154.1| PREDICTED: probable pre-mRNA-splicing factor... 141 8e-32
gb|ADN33898.1| ATP-dependent RNA helicase [Cucumis melo subsp. m... 141 1e-31
gb|ESW32681.1| hypothetical protein PHAVU_001G008600g [Phaseolus... 140 2e-31
ref|XP_004499233.1| PREDICTED: probable pre-mRNA-splicing factor... 138 7e-31
ref|XP_003544395.1| PREDICTED: probable pre-mRNA-splicing factor... 138 7e-31
>ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Vitis vinifera]
Length = 1172
Score = 155 bits (391), Expect = 7e-36
Identities = 74/83 (89%), Positives = 81/83 (97%)
Frame = +2
Query: 161 EDDGLKKLEYLSLVSKVCTELETHLGVSDKVLAEFITEMGRDCETMDEFDAKLKESGAEM 340
++DGLKKLEYLSLVSKVCTELETHLGV DKVLAEFIT+MGR CET+DEFD+KLKE+GAEM
Sbjct: 6 QNDGLKKLEYLSLVSKVCTELETHLGVGDKVLAEFITDMGRKCETVDEFDSKLKENGAEM 65
Query: 341 PDYFVRTLLTIIHAILPPKPKSE 409
PDYFVRTLLTIIHAILPPKPKS+
Sbjct: 66 PDYFVRTLLTIIHAILPPKPKSD 88
>emb|CBI31157.3| unnamed protein product [Vitis vinifera]
Length = 803
Score = 155 bits (391), Expect = 7e-36
Identities = 74/83 (89%), Positives = 81/83 (97%)
Frame = +2
Query: 161 EDDGLKKLEYLSLVSKVCTELETHLGVSDKVLAEFITEMGRDCETMDEFDAKLKESGAEM 340
++DGLKKLEYLSLVSKVCTELETHLGV DKVLAEFIT+MGR CET+DEFD+KLKE+GAEM
Sbjct: 45 QNDGLKKLEYLSLVSKVCTELETHLGVGDKVLAEFITDMGRKCETVDEFDSKLKENGAEM 104
Query: 341 PDYFVRTLLTIIHAILPPKPKSE 409
PDYFVRTLLTIIHAILPPKPKS+
Sbjct: 105 PDYFVRTLLTIIHAILPPKPKSD 127
>ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like isoform 2 [Vitis vinifera]
Length = 1175
Score = 155 bits (391), Expect = 7e-36
Identities = 74/83 (89%), Positives = 81/83 (97%)
Frame = +2
Query: 161 EDDGLKKLEYLSLVSKVCTELETHLGVSDKVLAEFITEMGRDCETMDEFDAKLKESGAEM 340
++DGLKKLEYLSLVSKVCTELETHLGV DKVLAEFIT+MGR CET+DEFD+KLKE+GAEM
Sbjct: 6 QNDGLKKLEYLSLVSKVCTELETHLGVGDKVLAEFITDMGRKCETVDEFDSKLKENGAEM 65
Query: 341 PDYFVRTLLTIIHAILPPKPKSE 409
PDYFVRTLLTIIHAILPPKPKS+
Sbjct: 66 PDYFVRTLLTIIHAILPPKPKSD 88
>emb|CAN82460.1| hypothetical protein VITISV_005515 [Vitis vinifera]
Length = 1162
Score = 155 bits (391), Expect = 7e-36
Identities = 74/83 (89%), Positives = 81/83 (97%)
Frame = +2
Query: 161 EDDGLKKLEYLSLVSKVCTELETHLGVSDKVLAEFITEMGRDCETMDEFDAKLKESGAEM 340
++DGLKKLEYLSLVSKVCTELETHLGV DKVLAEFIT+MGR CET+DEFD+KLKE+GAEM
Sbjct: 6 QNDGLKKLEYLSLVSKVCTELETHLGVGDKVLAEFITDMGRKCETVDEFDSKLKENGAEM 65
Query: 341 PDYFVRTLLTIIHAILPPKPKSE 409
PDYFVRTLLTIIHAILPPKPKS+
Sbjct: 66 PDYFVRTLLTIIHAILPPKPKSD 88
>ref|XP_004296476.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Fragaria vesca subsp. vesca]
Length = 1189
Score = 152 bits (385), Expect = 3e-35
Identities = 74/82 (90%), Positives = 79/82 (96%)
Frame = +2
Query: 164 DDGLKKLEYLSLVSKVCTELETHLGVSDKVLAEFITEMGRDCETMDEFDAKLKESGAEMP 343
DDGLKKLEYLSLVSKVC+ELETHLG DKVLAEFITEMGR+C ++DEFDAKLKE+GAEMP
Sbjct: 5 DDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRNCGSVDEFDAKLKENGAEMP 64
Query: 344 DYFVRTLLTIIHAILPPKPKSE 409
DYFVRTLLTIIHAILPPKPKSE
Sbjct: 65 DYFVRTLLTIIHAILPPKPKSE 86
>gb|EXB44282.1| putative pre-mRNA-splicing factor ATP-dependent RNA helicase [Morus
notabilis]
Length = 1205
Score = 152 bits (384), Expect = 4e-35
Identities = 73/82 (89%), Positives = 79/82 (96%)
Frame = +2
Query: 164 DDGLKKLEYLSLVSKVCTELETHLGVSDKVLAEFITEMGRDCETMDEFDAKLKESGAEMP 343
D+GLKKLEYLSLVSKVCTELE HLG DKVLAEFITEMG++C+T+DEFDAKLKE+GAEMP
Sbjct: 5 DEGLKKLEYLSLVSKVCTELENHLGFGDKVLAEFITEMGQNCDTVDEFDAKLKENGAEMP 64
Query: 344 DYFVRTLLTIIHAILPPKPKSE 409
DYFVRTLLTIIHAILPPKPKSE
Sbjct: 65 DYFVRTLLTIIHAILPPKPKSE 86
>ref|XP_004306870.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Fragaria vesca subsp. vesca]
Length = 1203
Score = 151 bits (382), Expect = 8e-35
Identities = 74/82 (90%), Positives = 78/82 (95%)
Frame = +2
Query: 164 DDGLKKLEYLSLVSKVCTELETHLGVSDKVLAEFITEMGRDCETMDEFDAKLKESGAEMP 343
DDGLKKLEYLSLVSKVC+ELETHLG DKVLAEFITEMGR+CE++DEFDAKLKE GAEMP
Sbjct: 5 DDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRNCESVDEFDAKLKEHGAEMP 64
Query: 344 DYFVRTLLTIIHAILPPKPKSE 409
DYFVRTLLTIIHAILPPK KSE
Sbjct: 65 DYFVRTLLTIIHAILPPKAKSE 86
>gb|EMJ14920.1| hypothetical protein PRUPE_ppa000417mg [Prunus persica]
Length = 1198
Score = 151 bits (381), Expect = 1e-34
Identities = 72/82 (87%), Positives = 78/82 (95%)
Frame = +2
Query: 164 DDGLKKLEYLSLVSKVCTELETHLGVSDKVLAEFITEMGRDCETMDEFDAKLKESGAEMP 343
DDGLKKLEYLSLVSKVC+ELETH+GV DKVLAEFITE+GR CET+DEFD KLK++GAEMP
Sbjct: 8 DDGLKKLEYLSLVSKVCSELETHIGVGDKVLAEFITELGRKCETVDEFDTKLKKNGAEMP 67
Query: 344 DYFVRTLLTIIHAILPPKPKSE 409
DYFVRTLLTIIHAILPPKPK E
Sbjct: 68 DYFVRTLLTIIHAILPPKPKPE 89
>ref|XP_002318357.2| ATP-dependent RNA helicase family protein [Populus trichocarpa]
gi|550326120|gb|EEE96577.2| ATP-dependent RNA helicase
family protein [Populus trichocarpa]
Length = 1207
Score = 149 bits (376), Expect = 4e-34
Identities = 72/89 (80%), Positives = 80/89 (89%)
Frame = +2
Query: 143 MGAEGKEDDGLKKLEYLSLVSKVCTELETHLGVSDKVLAEFITEMGRDCETMDEFDAKLK 322
M A G+ D GLKKLEYLSLVSKVC+ELETHLG DK+LAEFITE+GR C+T+DEFDAKLK
Sbjct: 1 MVAAGENDAGLKKLEYLSLVSKVCSELETHLGFGDKILAEFITELGRSCDTVDEFDAKLK 60
Query: 323 ESGAEMPDYFVRTLLTIIHAILPPKPKSE 409
E+GAEMPDYFVRTLLTIIHAILPPK + E
Sbjct: 61 ENGAEMPDYFVRTLLTIIHAILPPKAEKE 89
>ref|XP_006466902.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like isoform X1 [Citrus sinensis]
gi|568825052|ref|XP_006466903.1| PREDICTED: probable
pre-mRNA-splicing factor ATP-dependent RNA helicase-like
isoform X2 [Citrus sinensis]
Length = 1176
Score = 148 bits (373), Expect = 8e-34
Identities = 71/81 (87%), Positives = 77/81 (95%)
Frame = +2
Query: 164 DDGLKKLEYLSLVSKVCTELETHLGVSDKVLAEFITEMGRDCETMDEFDAKLKESGAEMP 343
DDGLKKLEY SLVSKVC+ELETHLG DKVLAEFITE+GR+CET+DEFD+KLKE+GAEMP
Sbjct: 7 DDGLKKLEYFSLVSKVCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKENGAEMP 66
Query: 344 DYFVRTLLTIIHAILPPKPKS 406
DYFVRTLLTIIHAILPPK KS
Sbjct: 67 DYFVRTLLTIIHAILPPKSKS 87
>ref|XP_006425547.1| hypothetical protein CICLE_v10024740mg [Citrus clementina]
gi|557527537|gb|ESR38787.1| hypothetical protein
CICLE_v10024740mg [Citrus clementina]
Length = 1176
Score = 148 bits (373), Expect = 8e-34
Identities = 71/81 (87%), Positives = 77/81 (95%)
Frame = +2
Query: 164 DDGLKKLEYLSLVSKVCTELETHLGVSDKVLAEFITEMGRDCETMDEFDAKLKESGAEMP 343
DDGLKKLEY SLVSKVC+ELETHLG DKVLAEFITE+GR+CET+DEFD+KLKE+GAEMP
Sbjct: 7 DDGLKKLEYFSLVSKVCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKENGAEMP 66
Query: 344 DYFVRTLLTIIHAILPPKPKS 406
DYFVRTLLTIIHAILPPK KS
Sbjct: 67 DYFVRTLLTIIHAILPPKSKS 87
>ref|XP_006374312.1| ATP-dependent RNA helicase family protein [Populus trichocarpa]
gi|550322071|gb|ERP52109.1| ATP-dependent RNA helicase
family protein [Populus trichocarpa]
Length = 1177
Score = 147 bits (372), Expect = 1e-33
Identities = 71/89 (79%), Positives = 78/89 (87%)
Frame = +2
Query: 143 MGAEGKEDDGLKKLEYLSLVSKVCTELETHLGVSDKVLAEFITEMGRDCETMDEFDAKLK 322
M + D GLKKLEYLSLVSKVC+ELETHLG DK+LAEFITE+GR CET+DEFDAKLK
Sbjct: 1 MATAAENDAGLKKLEYLSLVSKVCSELETHLGFGDKILAEFITELGRSCETVDEFDAKLK 60
Query: 323 ESGAEMPDYFVRTLLTIIHAILPPKPKSE 409
E+GAEMPDYFVRTLLTIIHAILPPK + E
Sbjct: 61 ENGAEMPDYFVRTLLTIIHAILPPKAEKE 89
>ref|XP_002331832.1| predicted protein [Populus trichocarpa]
Length = 1171
Score = 147 bits (372), Expect = 1e-33
Identities = 71/89 (79%), Positives = 78/89 (87%)
Frame = +2
Query: 143 MGAEGKEDDGLKKLEYLSLVSKVCTELETHLGVSDKVLAEFITEMGRDCETMDEFDAKLK 322
M + D GLKKLEYLSLVSKVC+ELETHLG DK+LAEFITE+GR CET+DEFDAKLK
Sbjct: 1 MATAAENDAGLKKLEYLSLVSKVCSELETHLGFGDKILAEFITELGRSCETVDEFDAKLK 60
Query: 323 ESGAEMPDYFVRTLLTIIHAILPPKPKSE 409
E+GAEMPDYFVRTLLTIIHAILPPK + E
Sbjct: 61 ENGAEMPDYFVRTLLTIIHAILPPKAEKE 89
>gb|EOY14972.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase isoform 1
[Theobroma cacao] gi|508723076|gb|EOY14973.1|
Pre-mRNA-splicing factor ATP-dependent RNA helicase
isoform 1 [Theobroma cacao]
Length = 1185
Score = 147 bits (371), Expect = 1e-33
Identities = 71/89 (79%), Positives = 81/89 (91%)
Frame = +2
Query: 143 MGAEGKEDDGLKKLEYLSLVSKVCTELETHLGVSDKVLAEFITEMGRDCETMDEFDAKLK 322
MG+ +DD L+KLEYLSLVSKV TELE+H+G SDKVLAEFIT+MGR CET++EFDAKLK
Sbjct: 1 MGSSPAKDDALEKLEYLSLVSKVSTELESHVGFSDKVLAEFITDMGRHCETVEEFDAKLK 60
Query: 323 ESGAEMPDYFVRTLLTIIHAILPPKPKSE 409
E+GAE+PDYFVRTLLTIIHAILPPKPK E
Sbjct: 61 ENGAELPDYFVRTLLTIIHAILPPKPKGE 89
>ref|XP_004243751.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Solanum lycopersicum]
Length = 1190
Score = 143 bits (361), Expect = 2e-32
Identities = 71/89 (79%), Positives = 81/89 (91%)
Frame = +2
Query: 143 MGAEGKEDDGLKKLEYLSLVSKVCTELETHLGVSDKVLAEFITEMGRDCETMDEFDAKLK 322
MGA+ +E++ LKKLEYLSL+SKVC+ELE HLG DKVLAEFITE+GR+C T+DEFDAKLK
Sbjct: 1 MGADSEENE-LKKLEYLSLISKVCSELEAHLGFGDKVLAEFITELGRNCSTVDEFDAKLK 59
Query: 323 ESGAEMPDYFVRTLLTIIHAILPPKPKSE 409
ESGAEMPDYFVRTLLTIIHAILPPK S+
Sbjct: 60 ESGAEMPDYFVRTLLTIIHAILPPKLTSK 88
>ref|XP_004498154.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like isoform X1 [Cicer arietinum]
gi|502123536|ref|XP_004498155.1| PREDICTED: probable
pre-mRNA-splicing factor ATP-dependent RNA helicase-like
isoform X2 [Cicer arietinum]
gi|502123538|ref|XP_004498156.1| PREDICTED: probable
pre-mRNA-splicing factor ATP-dependent RNA helicase-like
isoform X3 [Cicer arietinum]
gi|502123540|ref|XP_004498157.1| PREDICTED: probable
pre-mRNA-splicing factor ATP-dependent RNA helicase-like
isoform X4 [Cicer arietinum]
gi|502123542|ref|XP_004498158.1| PREDICTED: probable
pre-mRNA-splicing factor ATP-dependent RNA helicase-like
isoform X5 [Cicer arietinum]
gi|502123544|ref|XP_004498159.1| PREDICTED: probable
pre-mRNA-splicing factor ATP-dependent RNA helicase-like
isoform X6 [Cicer arietinum]
gi|502123546|ref|XP_004498160.1| PREDICTED: probable
pre-mRNA-splicing factor ATP-dependent RNA helicase-like
isoform X7 [Cicer arietinum]
gi|502123548|ref|XP_004498161.1| PREDICTED: probable
pre-mRNA-splicing factor ATP-dependent RNA helicase-like
isoform X8 [Cicer arietinum]
Length = 1178
Score = 141 bits (356), Expect = 8e-32
Identities = 71/87 (81%), Positives = 78/87 (89%)
Frame = +2
Query: 143 MGAEGKEDDGLKKLEYLSLVSKVCTELETHLGVSDKVLAEFITEMGRDCETMDEFDAKLK 322
MGAE +D GLKKLEYLSLVSKVCTELE+H G DKVLAEFIT++G ET++EFDAKLK
Sbjct: 1 MGAEIPQD-GLKKLEYLSLVSKVCTELESHTGAGDKVLAEFITDLGHSSETVEEFDAKLK 59
Query: 323 ESGAEMPDYFVRTLLTIIHAILPPKPK 403
E+GAEMPDYFVRTLLTIIHAILPPKPK
Sbjct: 60 ENGAEMPDYFVRTLLTIIHAILPPKPK 86
>gb|ADN33898.1| ATP-dependent RNA helicase [Cucumis melo subsp. melo]
Length = 953
Score = 141 bits (355), Expect = 1e-31
Identities = 68/78 (87%), Positives = 73/78 (93%)
Frame = +2
Query: 164 DDGLKKLEYLSLVSKVCTELETHLGVSDKVLAEFITEMGRDCETMDEFDAKLKESGAEMP 343
DDGLKKLEYLSLVSKVC+ELETHLG DKVLAEFITEMGR CET+DEFDAKLKE+GAEMP
Sbjct: 9 DDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKLKENGAEMP 68
Query: 344 DYFVRTLLTIIHAILPPK 397
DYFVR+LL IIH ILPP+
Sbjct: 69 DYFVRSLLRIIHLILPPQ 86
>gb|ESW32681.1| hypothetical protein PHAVU_001G008600g [Phaseolus vulgaris]
Length = 1201
Score = 140 bits (353), Expect = 2e-31
Identities = 67/80 (83%), Positives = 74/80 (92%)
Frame = +2
Query: 164 DDGLKKLEYLSLVSKVCTELETHLGVSDKVLAEFITEMGRDCETMDEFDAKLKESGAEMP 343
+DGLKKLEYLSLVSKVCTELE+H G DKVLAEFITE+GR E +++FDAKLKE+GAEMP
Sbjct: 7 EDGLKKLEYLSLVSKVCTELESHTGTGDKVLAEFITELGRSSENVEDFDAKLKENGAEMP 66
Query: 344 DYFVRTLLTIIHAILPPKPK 403
DYFVRTLLTIIHAILPPKPK
Sbjct: 67 DYFVRTLLTIIHAILPPKPK 86
>ref|XP_004499233.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Cicer arietinum]
Length = 1203
Score = 138 bits (348), Expect = 7e-31
Identities = 69/89 (77%), Positives = 76/89 (85%)
Frame = +2
Query: 143 MGAEGKEDDGLKKLEYLSLVSKVCTELETHLGVSDKVLAEFITEMGRDCETMDEFDAKLK 322
MGAE +D KKLEYLSLVSKVCTELE+H G DKVLAEFITE+G ET++EFD+KLK
Sbjct: 1 MGAEIPQDGLKKKLEYLSLVSKVCTELESHTGTGDKVLAEFITELGHSSETVEEFDSKLK 60
Query: 323 ESGAEMPDYFVRTLLTIIHAILPPKPKSE 409
+GAEMPDYFVRTLLTIIHAILPPKPK E
Sbjct: 61 LNGAEMPDYFVRTLLTIIHAILPPKPKKE 89
>ref|XP_003544395.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like isoform X1 [Glycine max]
gi|571512325|ref|XP_006596566.1| PREDICTED: probable
pre-mRNA-splicing factor ATP-dependent RNA helicase-like
isoform X2 [Glycine max]
Length = 1203
Score = 138 bits (348), Expect = 7e-31
Identities = 67/80 (83%), Positives = 73/80 (91%)
Frame = +2
Query: 164 DDGLKKLEYLSLVSKVCTELETHLGVSDKVLAEFITEMGRDCETMDEFDAKLKESGAEMP 343
+DGLKKLEYLSLVSKVCTELE+H G DKVLAEFITE+GR E ++EFDAKLKE+GAEMP
Sbjct: 7 EDGLKKLEYLSLVSKVCTELESHTGTGDKVLAEFITELGRSSENVEEFDAKLKENGAEMP 66
Query: 344 DYFVRTLLTIIHAILPPKPK 403
DYFVRTLLTIIHAILPPK K
Sbjct: 67 DYFVRTLLTIIHAILPPKSK 86