BLASTX nr result

ID: Catharanthus23_contig00019631 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00019631
         (416 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ02691.1| hypothetical protein PRUPE_ppa014760mg, partial [...    57   2e-06
ref|XP_004292412.1| PREDICTED: putative ribonuclease H protein A...    57   3e-06
gb|EMJ14713.1| hypothetical protein PRUPE_ppa020664mg, partial [...    56   6e-06
ref|XP_006470496.1| PREDICTED: uncharacterized protein LOC102617...    55   1e-05
ref|XP_004301010.1| PREDICTED: putative ribonuclease H protein A...    55   1e-05

>gb|EMJ02691.1| hypothetical protein PRUPE_ppa014760mg, partial [Prunus persica]
          Length = 450

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 3/125 (2%)
 Frame = -2

Query: 403 LCVMFLWSLWQSRNRKVFEGKIFSPRQIVYHATSLLSGCQLAHQGRSVPR*IVHPRQERV 224
           +  M+L SLWQ+RN+ V EG+  + + ++++    L+G      G  V        ++  
Sbjct: 231 IATMYLSSLWQNRNKAVIEGRSCA-QDVIFNRAHHLAG----EYGSLVEGEPKLFEEKPT 285

Query: 223 SWSRPDTGGYKINVDAAY--RGHYGDVGA-VRDWEGMVQ*AAEIPIN*AVSAKHMEALAM 53
            WS P  G YK+NVD A+      G +GA VR+ +G V  A  +P+  A S+KH E +A 
Sbjct: 286 KWSPPLAGKYKLNVDTAFIPETGVGGIGAVVRNDKGEVMAAMALPLASATSSKHAEIMAF 345

Query: 52  IQGME 38
           +  M+
Sbjct: 346 LFWMK 350


>ref|XP_004292412.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 369

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
 Frame = -2

Query: 397 VMFLWSLWQSRNRKVFEGKIFSPRQIVYHATSLLSGCQLAHQGRSVPR*IVHPRQERVSW 218
           +M LW +W  RN  V+ GK ++   +   + +LL   +  HQ     +     ++    W
Sbjct: 165 LMTLWVIWVERNNMVWRGKYYNAANMFEWSITLLREYKECHQHSGSKK-----KRAISKW 219

Query: 217 SRPDTGGYKINVDAAYRGHYGDVG---AVRDWEGMVQ*AAEIPIN*AVSAKHMEALAMIQ 47
           S P  G  K+N+D ++    G  G    VR++EG        P   A+SA HMEA A+  
Sbjct: 220 SCPPRGRLKVNIDGSFEQELGSGGVGVVVRNYEGECVATFARPFQYALSAFHMEAEALRA 279

Query: 46  GM 41
           GM
Sbjct: 280 GM 281


>gb|EMJ14713.1| hypothetical protein PRUPE_ppa020664mg, partial [Prunus persica]
          Length = 171

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
 Frame = -2

Query: 376 WQSRNRKVFEGKIFSPRQIVYHATSLLSGCQLAHQGRSVPR*IVHPRQERVSWSRPDTGG 197
           WQ+RN+ + EG+ +  + ++++          AH          H  ++   WS P  G 
Sbjct: 3   WQNRNKAIIEGR-YCAQDVIFNR---------AH----------HLAEKSTKWSPPPAGK 42

Query: 196 YKINVDAAY--RGHYGDVGA-VRDWEGMVQ*AAEIPIN*AVSAKHMEALAMIQGME 38
           YK+NVDAA+      G +GA VR+ +G V  A  +P+  A S+KH E +A + GM+
Sbjct: 43  YKLNVDAAFIPETGVGGIGAVVRNDKGEVMAAMALPLASATSSKHAEIMAFLFGMK 98


>ref|XP_006470496.1| PREDICTED: uncharacterized protein LOC102617255 [Citrus sinensis]
          Length = 440

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 45/140 (32%), Positives = 62/140 (44%), Gaps = 6/140 (4%)
 Frame = -2

Query: 403 LCVMFLWSLWQSRNRKVFEGKIFSPRQIVYHATSLLSGCQLAHQGR---SVPR*IVHPRQ 233
           L VM  WSLWQ+RN  V+ GK    +Q++  A   L   QL  + +   S P  I H   
Sbjct: 220 LAVMICWSLWQNRNDMVWRGKTSGVQQLLNSAGHFLFQWQLVRKQQFLFSQPSPIGH--- 276

Query: 232 ERVSWSRPDTGGYKINVDA---AYRGHYGDVGAVRDWEGMVQ*AAEIPIN*AVSAKHMEA 62
             + W  P  G  K NVD    A+RG+ G    +RD       A    I    SA+  EA
Sbjct: 277 GAICWEPPVAGRLKCNVDVALFAFRGYIGFGNVIRDSNCAFMAARCCSIPGRFSARDAEA 336

Query: 61  LAMIQGMEMTFLLQLPSFCV 2
           L + + +     LQL +  +
Sbjct: 337 LGVREALSWIKQLQLSNVTI 356


>ref|XP_004301010.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 735

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
 Frame = -2

Query: 397 VMFLWSLWQSRNRKVFEGKIFSPRQIVYHATSLLSGCQLAHQGRSVPR*IVHPRQERVSW 218
           +M LW +W  RN  V+ GK ++   +   +T+LL   +  HQ     +     ++    W
Sbjct: 369 LMALWVIWVERNNMVWRGKYYNAANMFEWSTTLLREYKECHQHSGSKK-----KRAISKW 423

Query: 217 SRPDTGGYKINVDAAYRGHYGDVG---AVRDWEGMVQ*AAEIPIN*AVSAKHMEALAMIQ 47
           S    G  K+N+D ++    G  G    VR++EG        P   A+SA HMEA A+  
Sbjct: 424 SCLPRGRLKVNIDGSFEQELGSGGVGVVVRNYEGECVATFARPFQYALSAFHMEAEALRA 483

Query: 46  GM 41
           GM
Sbjct: 484 GM 485


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