BLASTX nr result
ID: Catharanthus23_contig00019586
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus23_contig00019586 (1072 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana] 97 1e-17 sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H pr... 97 1e-17 gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas... 54 2e-17 gb|EMJ04547.1| hypothetical protein PRUPE_ppa020364mg, partial [... 58 2e-15 ref|XP_006492639.1| PREDICTED: putative ribonuclease H protein A... 89 3e-15 emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga... 55 4e-15 gb|EOY02864.1| Ribonuclease H protein [Theobroma cacao] 87 1e-14 dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 86 2e-14 dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] 85 6e-14 gb|EOX98014.1| Ribonuclease H protein [Theobroma cacao] 84 1e-13 dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] 83 2e-13 gb|AAC63844.1| putative non-LTR retroelement reverse transcripta... 80 6e-13 gb|AAC26674.1| putative non-LTR retroelement reverse transcripta... 77 5e-12 gb|EMJ21971.1| hypothetical protein PRUPE_ppa026532mg [Prunus pe... 78 5e-12 ref|XP_004301145.1| PREDICTED: putative ribonuclease H protein A... 71 6e-12 ref|XP_006470496.1| PREDICTED: uncharacterized protein LOC102617... 77 2e-11 emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga... 76 2e-11 gb|EMJ10020.1| hypothetical protein PRUPE_ppa025050mg [Prunus pe... 59 6e-11 gb|ABE80133.2| Polynucleotidyl transferase, Ribonuclease H fold ... 72 3e-10 gb|ABK28199.1| unknown [Arabidopsis thaliana] 64 4e-10 >gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana] Length = 1055 Score = 97.1 bits (240), Expect = 1e-17 Identities = 85/337 (25%), Positives = 147/337 (43%), Gaps = 19/337 (5%) Frame = +1 Query: 1 LRWSHTNNGDFSSKTAYDALIREEDPQDTVD--YGWIWKSKTCQRVKHFLWLTARERLPT 174 L W + +G FS ++AY+ L +E P+ + + +WK + +RVK FLWL + + T Sbjct: 364 LSWKFSQDGQFSVRSAYEMLTVDEVPRPNMASFFNCLWKVRVPERVKTFLWLVGNQAVMT 423 Query: 175 ------KHLLLPGKIEVDPKTCQKEEEDVSHILKDCPIARPTWTALDTVWTPSQTHGQTS 336 +HL +V C+ E + H+L+DCP W V + G S Sbjct: 424 EEERHRRHLSASNVCQV----CKGGVESMLHVLRDCPAQLGIWVR---VVPQRRQQGFFS 476 Query: 337 YNGYGLAVPRLSCLISSEYLGTPSFPSLIGLYGGNETRASLTTPQPSPIQESLNRAKEFA 516 + + L E + + ++I ++ G + R + + ++ + KE+A Sbjct: 477 KSLFEWLYDNLGDRSGCEDIPWSTIFAVI-IWWGWKWRCGNIFGENTKCRDRVKFVKEWA 535 Query: 517 T----LDLG*VSV---PSKVAKEVGWTPPPPGWHKLNTXXXXXXXXXXXXXXXVLRNSLG 675 G V V +V + +GW P GW K+NT VLR+ G Sbjct: 536 VEVYRAHSGNVLVGITQPRVERMIGWVSPCVGWVKVNTDGASRGNPGLASAGGVLRDCTG 595 Query: 676 QWEQSYSRNLGRTNNSASELWGLRDGLAFAKSLNIQKLEIEIDATLVSNL----VNQLHP 843 W +S N+GR + +ELWG+ GL FA + ++E+E+D+ ++ ++ HP Sbjct: 596 AWCGGFSLNIGRCSAPQAELWGVYYGLYFAWEKKVPRVELEVDSEVIVGFLKTGISDSHP 655 Query: 844 DRYSSFFLYFL*LQVNDDYICRV*GITYLPEANMCAD 954 SF + + D++ R+ + EAN AD Sbjct: 656 ---LSFLVRLCHGFLQKDWLVRI--VHVYREANRLAD 687 >sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H protein At1g65750 Length = 620 Score = 97.1 bits (240), Expect = 1e-17 Identities = 85/337 (25%), Positives = 147/337 (43%), Gaps = 19/337 (5%) Frame = +1 Query: 1 LRWSHTNNGDFSSKTAYDALIREEDPQDTVD--YGWIWKSKTCQRVKHFLWLTARERLPT 174 L W + +G FS ++AY+ L +E P+ + + +WK + +RVK FLWL + + T Sbjct: 255 LSWKFSQDGQFSVRSAYEMLTVDEVPRPNMASFFNCLWKVRVPERVKTFLWLVGNQAVMT 314 Query: 175 ------KHLLLPGKIEVDPKTCQKEEEDVSHILKDCPIARPTWTALDTVWTPSQTHGQTS 336 +HL +V C+ E + H+L+DCP W V + G S Sbjct: 315 EEERHRRHLSASNVCQV----CKGGVESMLHVLRDCPAQLGIWVR---VVPQRRQQGFFS 367 Query: 337 YNGYGLAVPRLSCLISSEYLGTPSFPSLIGLYGGNETRASLTTPQPSPIQESLNRAKEFA 516 + + L E + + ++I ++ G + R + + ++ + KE+A Sbjct: 368 KSLFEWLYDNLGDRSGCEDIPWSTIFAVI-IWWGWKWRCGNIFGENTKCRDRVKFVKEWA 426 Query: 517 T----LDLG*VSV---PSKVAKEVGWTPPPPGWHKLNTXXXXXXXXXXXXXXXVLRNSLG 675 G V V +V + +GW P GW K+NT VLR+ G Sbjct: 427 VEVYRAHSGNVLVGITQPRVERMIGWVSPCVGWVKVNTDGASRGNPGLASAGGVLRDCTG 486 Query: 676 QWEQSYSRNLGRTNNSASELWGLRDGLAFAKSLNIQKLEIEIDATLVSNL----VNQLHP 843 W +S N+GR + +ELWG+ GL FA + ++E+E+D+ ++ ++ HP Sbjct: 487 AWCGGFSLNIGRCSAPQAELWGVYYGLYFAWEKKVPRVELEVDSEVIVGFLKTGISDSHP 546 Query: 844 DRYSSFFLYFL*LQVNDDYICRV*GITYLPEANMCAD 954 SF + + D++ R+ + EAN AD Sbjct: 547 ---LSFLVRLCHGFLQKDWLVRI--VHVYREANRLAD 578 >gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase); Polynucleotidyl transferase, Ribonuclease H fold [Medicago truncatula] Length = 729 Score = 53.5 bits (127), Expect(3) = 2e-17 Identities = 28/91 (30%), Positives = 45/91 (49%) Frame = +1 Query: 565 VGWTPPPPGWHKLNTXXXXXXXXXXXXXXXVLRNSLGQWEQSYSRNLGRTNNSASELWGL 744 +GW PP GW KLN +LR+S G+W + Y + +G + +E+WG+ Sbjct: 626 IGWMRPPFGWVKLNCDGAWKGSGTLAGCGGLLRDSDGRWIKGYFKKIGMCDAFHAEMWGM 685 Query: 745 RDGLAFAKSLNIQKLEIEIDATLVSNLVNQL 837 GL A N L +E D+ ++S L + + Sbjct: 686 YLGLDMAWRENTTHLIVESDSKILSLLFDDI 716 Score = 52.0 bits (123), Expect(3) = 2e-17 Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 3/99 (3%) Frame = +1 Query: 7 WSHTNNGDFSSKTAYDALIREEDPQDTV-DYGWIWKSKTCQRVKHFLWLTARERLPTKHL 183 W TN F+ ++AY+ +++E+P D+ +W K R++ F+WL A R+ T + Sbjct: 436 WGGTNTLKFTVQSAYN--LQQENPFAVGGDWKTLWNWKGPHRIQTFIWLAAHGRILTNYR 493 Query: 184 LLPGKIEVDPKT--CQKEEEDVSHILKDCPIARPTWTAL 294 + + P C +E+E V H+L+DC + W L Sbjct: 494 RSKWGVGISPTCPCCAREDETVIHVLRDCVHSTQVWLRL 532 Score = 31.2 bits (69), Expect(3) = 2e-17 Identities = 12/21 (57%), Positives = 12/21 (57%) Frame = +3 Query: 396 WNTIFSFTYWTLWRQRNKGIF 458 W T F T W LW RNK IF Sbjct: 566 WQTTFMTTCWYLWNWRNKSIF 586 >gb|EMJ04547.1| hypothetical protein PRUPE_ppa020364mg, partial [Prunus persica] Length = 295 Score = 58.2 bits (139), Expect(3) = 2e-15 Identities = 36/105 (34%), Positives = 50/105 (47%), Gaps = 5/105 (4%) Frame = +1 Query: 547 SKVAKEVGWTPPPPGWHKLNTXXXXXXXXXXXXXXXVLRNSLGQWEQSYSRNLGRTNNSA 726 +KV + W PP G KLN VLR+ LGQW ++ NLG+ Sbjct: 119 NKVQVLLAWVPPEIGVVKLNIDGSCRGSTGAIDAGGVLRDHLGQWIAGFAVNLGQGEVLD 178 Query: 727 SELWGLRDGLAFAKSLNIQKLEIEIDATLV-----SNLVNQLHPD 846 +ELWGL GL A N+ + IE+D+ V S ++N HP+ Sbjct: 179 AELWGLFFGLNLAVEKNLDDIVIEMDSDTVMLLIESKVLNDCHPN 223 Score = 40.8 bits (94), Expect(3) = 2e-15 Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Frame = +3 Query: 327 TDFLQWLRFGCSSTKLFDKFRIPWNTIFSFTYWTLWRQRNKGIF-NDTPTISDPREL 494 TDF WL S F + IPW +F F W +W+ RN IF N+T +PR+L Sbjct: 45 TDFHPWLLNNLCSKAHFAQ--IPWRILFVFICWYIWKWRNDFIFKNETDLPFNPRDL 99 Score = 30.4 bits (67), Expect(3) = 2e-15 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = +2 Query: 848 DTHPFFSIFSDCR*MMTTFAEFRVSHIYRRQTCV 949 D HP + S C+ +M F ++ HIYR + V Sbjct: 219 DCHPNAGLVSSCKRLMNLFRRIKLQHIYRERNDV 252 >ref|XP_006492639.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus sinensis] Length = 569 Score = 89.0 bits (219), Expect = 3e-15 Identities = 72/288 (25%), Positives = 123/288 (42%), Gaps = 10/288 (3%) Frame = +1 Query: 1 LRWSHTNNGDFSSKTAYDALIREEDPQDTVDYGWIWKSKTCQRVKHFLWLTARERLPTKH 180 L W+H+ +G F++ +AY AL + D + +W K Q V+ FLW +RL TK Sbjct: 142 LFWAHSKSGRFTTHSAYLALSNDTPMHDDRLWRMVWNWKGPQSVRIFLWQVFHDRLKTKA 201 Query: 181 LLLPGKIEVDPK--TCQKEEEDVSHILKDCPIARPTWTALDTVWTPSQTHGQTSYNGYGL 354 L I V C ED H+L+DC + + W + P+ Q +N Sbjct: 202 ELARRHIPVSTSCDRCGAVNEDAMHVLRDCALVKLFWLLI----LPANKR-QQFFNSRLQ 256 Query: 355 AVPRLSCLISSEYLGTPSFPSLIGL------YGGNETRASLTTPQPSPI-QESLNRAKEF 513 R + I ++ G+ + N+ + + P+ + + L R E Sbjct: 257 EWLRTNVGIVGRLGSVSNWAIFFGIALWRLWFWRNQFFFNQASMDPNVVLMDVLTRTAEM 316 Query: 514 ATLDLG*VSVPS-KVAKEVGWTPPPPGWHKLNTXXXXXXXXXXXXXXXVLRNSLGQWEQS 690 + ++ +V + + W PP W LNT ++R+ +G+W Sbjct: 317 HKIHTHPLTTGHIRVTRWISWKPPDWPWCSLNT-DGAHNRGGTSTAWGLIRDHMGRWLSG 375 Query: 691 YSRNLGRTNNSASELWGLRDGLAFAKSLNIQKLEIEIDATLVSNLVNQ 834 + +G + + +ELWGL GL A + I+KL++EID+ V LV + Sbjct: 376 FGMMIGSCSITVAELWGLYQGLQLAWNSGIRKLQVEIDSLCVLQLVTK 423 >emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1363 Score = 55.5 bits (132), Expect(3) = 4e-15 Identities = 29/86 (33%), Positives = 43/86 (50%) Frame = +1 Query: 571 WTPPPPGWHKLNTXXXXXXXXXXXXXXXVLRNSLGQWEQSYSRNLGRTNNSASELWGLRD 750 W PP G+ KLNT V R+++G WE +++ + + A+EL +R+ Sbjct: 1198 WKPPHQGFLKLNTDGAWKADWENAGIGGVFRDAVGNWELGFAKRVDAGSPEAAELMAIRE 1257 Query: 751 GLAFAKSLNIQKLEIEIDATLVSNLV 828 GL A N KLE+E DA V L+ Sbjct: 1258 GLQVAWDCNYHKLEVECDAKGVVQLL 1283 Score = 45.4 bits (106), Expect(3) = 4e-15 Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 3/96 (3%) Frame = +1 Query: 7 WSHTNNGDFSSKTAYDALIR-EEDPQDTVDYGWIWKSKTCQRVKHFLWLTARERLPTKHL 183 W+ NG FS K+AY + R EE+ + +W+ + K +W LPT Sbjct: 1008 WNFEKNGTFSVKSAYYLINRREEETGGKGSWRGLWRKNIPFKYKLLIWNGIHNILPTALF 1067 Query: 184 LLPGKIEVDPK--TCQKEEEDVSHILKDCPIARPTW 285 L +P+ C ED+ H+ +DC +A W Sbjct: 1068 LAKRIHNFNPQCVACDHPIEDMIHLFRDCCVASSVW 1103 Score = 27.7 bits (60), Expect(3) = 4e-15 Identities = 9/21 (42%), Positives = 13/21 (61%) Frame = +3 Query: 396 WNTIFSFTYWTLWRQRNKGIF 458 W T F+ +W +W RNK +F Sbjct: 1137 WVTKFTTAFWHIWCSRNKTVF 1157 >gb|EOY02864.1| Ribonuclease H protein [Theobroma cacao] Length = 660 Score = 87.0 bits (214), Expect = 1e-14 Identities = 78/302 (25%), Positives = 126/302 (41%), Gaps = 23/302 (7%) Frame = +1 Query: 7 WSHTNNGDFSSKTAYDALIREEDPQDTVDYG-W--IWKSKTCQRVKHFLWLTARERLPTK 177 W + +G F+ + YD L + P G W WK + QRV+ FL+ RL T Sbjct: 293 WGESASGQFTVASVYDYLRQLSSPAKARPSGIWQGAWKWQGSQRVRTFLFQCLHGRLLTN 352 Query: 178 HLLLPGKIEVDP--KTCQKEEEDVSHILKDCPIARPTWTALDTVWTPSQTHGQTSYNGYG 351 L ++ D C+ E+E V+H+L+DC +A W + H Q + + Sbjct: 353 RERLHRQLTTDSLCPQCRMEDETVTHVLRDCMVATSLWVKI------IPQHEQNDFFTFP 406 Query: 352 LAVPRLSCLISSEYLGTPSFPSLIGLY--------GGNETRASLTTPQPSPIQESLNRAK 507 L +S L + + + + GL G A+ +P ++ ++ K Sbjct: 407 LREWLVSNLQKQQLILGNPWSVVFGLACWCLWKWRNGVVFYAAF-----NPTRKRISMIK 461 Query: 508 EFATL------DLG*VSVPSKVAKEV--GWTPPPPGWHKLNTXXXXXXXXXXXXXXXVLR 663 AT D V V + +EV GW P GW LNT V+R Sbjct: 462 SMATATIATSADFDGVQVERRKKEEVLIGWRTPQVGWVCLNTDEAYKRSIEEASTGGVIR 521 Query: 664 NSLGQWEQSYSRNLGRTNNSASELWGLRDGLAFAKSLNIQKLEIEIDATLVSNLV--NQL 837 N+ G W+ + LG+ + +ELWG+ GL A +K+++++D +V V N+L Sbjct: 522 NAEGDWQAEFLAKLGKCSAYRAELWGVLHGLRLAWDSGFKKVQVQVDNKMVVPAVSTNKL 581 Query: 838 HP 843 P Sbjct: 582 IP 583 >dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] Length = 1366 Score = 86.3 bits (212), Expect = 2e-14 Identities = 89/351 (25%), Positives = 140/351 (39%), Gaps = 24/351 (6%) Frame = +1 Query: 1 LRWSHTNNGDFSSKTAYDALIREEDPQDTVDYGWIWKSKTCQRVKHFLWLTARERLPTKH 180 L W H+ G + +AY +LI D D + WIW++ +++K F+W + L Sbjct: 1008 LSWPHSTTGMVTVSSAY-SLIAGHDGDDR-SHDWIWRATCTEKIKLFMWKIVKNGL---- 1061 Query: 181 LLLPGKIEVDPK-----------TCQKEEEDVSHILKDCPIARPTWTALDTVWTPSQTHG 327 + V+ K C +E+E + H+ + C +A W + P T Sbjct: 1062 -----MVNVERKRRGLADAASCPVCGEEDETLDHLFRRCLLAEACWDSA----VPPLTF- 1111 Query: 328 QTSYNGYGLAVPRLSCLISSEYLGTPSFPSLIGLY-------GGNETRASLTTPQPSPI- 483 QTS + + + + +C S + G + SLI Y N PS I Sbjct: 1112 QTSNHLHMHSWMKAACS-SQQKDGYSTNWSLIFPYILWNLWKARNRLVFDNNITAPSDIL 1170 Query: 484 QESLNRAKEFATLDLG*VSVPSKVAKEVGWTPPPPGWHKLNTXXXXXXXXXXXXXXXVLR 663 S + E L + + V W+PP G+ KLN+ +LR Sbjct: 1171 NRSFMESSEARCLLAKRTGLQTAFQTWVVWSPPAAGFTKLNSDGACKSHSHLASAGGLLR 1230 Query: 664 NSLGQWEQSYSRNLGRTNNSASELWGLRDGLAFAKSLNIQKLEIEIDATLVSNLVNQLHP 843 N G W Y+ N+G N+ +ELWGLR+GL AK+ KL E D+ V ++ + P Sbjct: 1231 NENGLWVAGYTCNIGTANSFLAELWGLREGLLLAKNRGFTKLIAETDSEAVVQVLRKDGP 1290 Query: 844 DRYSSFFLYFL*LQVND-----DYICRV*GITYLPEANMCADAAKHEGAAT 981 + L V D D+ + L E N CAD + G ++ Sbjct: 1291 VTPDASIL------VKDCKLLLDHFQEIKVTHILREGNQCADFLANLGQSS 1335 >dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] Length = 1366 Score = 84.7 bits (208), Expect = 6e-14 Identities = 89/351 (25%), Positives = 139/351 (39%), Gaps = 24/351 (6%) Frame = +1 Query: 1 LRWSHTNNGDFSSKTAYDALIREEDPQDTVDYGWIWKSKTCQRVKHFLWLTARERLPTKH 180 L W H+ G + +AY +LI D D + WIW++ +++K F+W + L Sbjct: 1008 LSWPHSTTGMVTVSSAY-SLIAGHDGDDR-SHDWIWRATCTEKIKLFMWKIVKNGL---- 1061 Query: 181 LLLPGKIEVDPK-----------TCQKEEEDVSHILKDCPIARPTWTALDTVWTPSQTHG 327 + V+ K C +E+E + H+ + C +A W + P T Sbjct: 1062 -----MVNVERKRRGLADAASCPVCGEEDETLDHLFRRCLLAEACWDSA----VPPLTF- 1111 Query: 328 QTSYNGYGLAVPRLSCLISSEYLGTPSFPSLIGLY-------GGNETRASLTTPQPSPI- 483 QTS + + + + +C S + G + SLI Y N PS I Sbjct: 1112 QTSNHLHMHSWMKAACS-SQQKDGYGTNWSLIFPYILWNLWKARNRLVFDNNITAPSDIL 1170 Query: 484 QESLNRAKEFATLDLG*VSVPSKVAKEVGWTPPPPGWHKLNTXXXXXXXXXXXXXXXVLR 663 S + E L + + V W+PP G+ KLN+ +LR Sbjct: 1171 NRSFMESSEARCLLAKRTGLQTAFQTWVVWSPPAAGFTKLNSDGACKSHSHLASAGGLLR 1230 Query: 664 NSLGQWEQSYSRNLGRTNNSASELWGLRDGLAFAKSLNIQKLEIEIDATLVSNLVNQLHP 843 N G W Y N+G N+ +ELWGLR+GL AK+ KL E D+ V ++ + P Sbjct: 1231 NENGLWVAGYICNIGTANSFLAELWGLREGLLLAKNRGFTKLIAETDSEAVVQVLRKDGP 1290 Query: 844 DRYSSFFLYFL*LQVND-----DYICRV*GITYLPEANMCADAAKHEGAAT 981 + L V D D+ + L E N CAD + G ++ Sbjct: 1291 VTPDASIL------VKDCKLLLDHFQEIKVTHILREGNQCADFLANLGQSS 1335 >gb|EOX98014.1| Ribonuclease H protein [Theobroma cacao] Length = 528 Score = 84.0 bits (206), Expect = 1e-13 Identities = 72/282 (25%), Positives = 116/282 (41%), Gaps = 7/282 (2%) Frame = +1 Query: 7 WSHTNNGDFSSKTAYDALIREEDPQDTVDYG-W--IWKSKTCQRVKHFLWLTARERLPTK 177 W + +G F+ +AYD L + P G W WK + QRV+ FL+ RL T Sbjct: 77 WGKSASGQFTIASAYDYLRQLSSPTKARPSGIWQGAWKWQGSQRVRTFLFQCLHGRLLTN 136 Query: 178 HLLLPGKIEVDP--KTCQKEEEDVSHILKDCPIARPTWTALDTVWTPSQTHGQTSYNGYG 351 L ++ D C+ E+E V+H+L+DC +A W + P Sbjct: 137 RKRLHRQLTADSLCPQCRMEDETVTHVLRDCMVATSLWKQQLILGNPWSI---------- 186 Query: 352 LAVPRLSCLISSEYLGTPSFPSLIGLYGGNETRASLTTPQPSPIQESLNRAKEFATLDLG 531 V RL+C ++ F N TR ++ + +S+ A + D Sbjct: 187 --VFRLACWYLWKWRNGVVFDVAF-----NPTRKRIS------MIKSMATATIAPSADFD 233 Query: 532 *VSVPSKVAKEV--GWTPPPPGWHKLNTXXXXXXXXXXXXXXXVLRNSLGQWEQSYSRNL 705 V V + +EV W P GW LNT V RN+ G W+ + L Sbjct: 234 GVQVERRKKEEVLIEWRAPQVGWVCLNTDGAYKRSIEEASAGGVKRNAEGDWQAGFVAKL 293 Query: 706 GRTNNSASELWGLRDGLAFAKSLNIQKLEIEIDATLVSNLVN 831 G+ + +ELWG+ GL A +K+++++D +V ++ Sbjct: 294 GKCSAYRAELWGILHGLRLAWDSGFKKVQVQVDNKMVVQAIS 335 >dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] Length = 1898 Score = 83.2 bits (204), Expect = 2e-13 Identities = 85/349 (24%), Positives = 137/349 (39%), Gaps = 24/349 (6%) Frame = +1 Query: 7 WSHTNNGDFSSKTAYDALIREEDPQDTVDYGWIWKSKTCQRVKHFLWLTARERLPTKHLL 186 W H+ G + +AY + + D + WIW++ +++K F+W + L Sbjct: 1542 WPHSTTGMVTVSSAYSLIAGHDG--DGRSHDWIWRATCTEKIKLFMWKIVKNGL------ 1593 Query: 187 LPGKIEVDPK-----------TCQKEEEDVSHILKDCPIARPTWTALDTVWTPSQTHGQT 333 + V+ K C +E+E + H+ + C +A W + P T QT Sbjct: 1594 ---MVNVERKRRGLADAASCPVCGEEDETLDHLFRRCLLAEACWDSA----VPPLTF-QT 1645 Query: 334 SYNGYGLAVPRLSCLISSEYLGTPSFPSLIGLY-------GGNETRASLTTPQPSPI-QE 489 S + + + + +C S + G + SLI Y N PS I Sbjct: 1646 SNHLHMHSWMKAACS-SQQKDGYGTNWSLIFPYILWNLWKARNRLVFDNNITAPSDILNR 1704 Query: 490 SLNRAKEFATLDLG*VSVPSKVAKEVGWTPPPPGWHKLNTXXXXXXXXXXXXXXXVLRNS 669 S + E L + + V W+PP G+ KLN+ +LRN Sbjct: 1705 SFMESSEARCLLAKRTGLQTAFQTWVVWSPPAAGFTKLNSDGACKSHSHLASAGGLLRNE 1764 Query: 670 LGQWEQSYSRNLGRTNNSASELWGLRDGLAFAKSLNIQKLEIEIDATLVSNLVNQLHPDR 849 G W Y+ N+G N+ +ELWGLR+GL AK+ KL E D+ V ++ + P Sbjct: 1765 NGLWVAGYTCNIGTANSFLAELWGLREGLLLAKNRGFTKLIAETDSEAVVQVLRKDGPVT 1824 Query: 850 YSSFFLYFL*LQVND-----DYICRV*GITYLPEANMCADAAKHEGAAT 981 + L V D D+ + L E N CAD + G ++ Sbjct: 1825 PDASIL------VKDCKLLLDHFQEIKVTHILREGNQCADFLANLGQSS 1867 >gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1231 Score = 80.1 bits (196), Expect(2) = 6e-13 Identities = 71/298 (23%), Positives = 128/298 (42%), Gaps = 17/298 (5%) Frame = +1 Query: 1 LRWSHTNNGDFSSKTAYDALIRE--EDPQDTVDYGWIWKSKTCQRVKHFLWLTARERLPT 174 + W T +G F+ ++AY L + + P + IWK T +RV+ F+WL ++ + T Sbjct: 870 ISWKGTQDGAFTVRSAYSLLQGDVGDRPNMGSFFNRIWKLITPERVRVFIWLVSQNVIMT 929 Query: 175 KHLLLPGKIEVDP--KTCQKEEEDVSHILKDCPIARPTWTALDTVWTPSQTHGQTSYNGY 348 + + + C EE + H+L+DCP P W L P + H + Sbjct: 930 NVERVRRHLSENAICSVCNGAEETILHVLRDCPAMEPIWRRL----LPLRRHHEF----- 980 Query: 349 GLAVPRLSCLISSEYLGTPSFPSL--IGLYGGNETRASLTTPQPSPIQESL----NRAKE 510 + L L ++ +P+L +G++ + R + ++ L + A+E Sbjct: 981 -FSQSLLEWLFTNMDPVKGIWPTLFGMGIWWAWKWRCCDVFGERKICRDRLKFIKDMAEE 1039 Query: 511 FATLDLG*V-SVPS--KVAKEVGWTPPPPGWHKLNTXXXXXXXXXXXXXXXVLRNSLGQW 681 + +G V + P+ +V + + W P GW K+ T +RN G+W Sbjct: 1040 VRRVHVGAVGNRPNGVRVERMIRWQVPSDGWVKITTDGASRGNHGLAAAGGAIRNGQGEW 1099 Query: 682 EQSYSRNLGRTNNSASELWGLRDGLAFAKSLNIQKLEIEIDATLV----SNLVNQLHP 843 ++ N+G +ELWG GL A +++E+++D LV S V+ HP Sbjct: 1100 LGGFALNIGSCAAPLAELWGAYYGLLIAWDKGFRRVELDLDCKLVVGFLSTGVSNAHP 1157 Score = 21.6 bits (44), Expect(2) = 6e-13 Identities = 10/29 (34%), Positives = 14/29 (48%) Frame = +2 Query: 848 DTHPFFSIFSDCR*MMTTFAEFRVSHIYR 934 + HP + C+ T RVSH+YR Sbjct: 1154 NAHPLSFLVRLCQGFFTRDWLVRVSHVYR 1182 >gb|AAC26674.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 970 Score = 77.4 bits (189), Expect(2) = 5e-12 Identities = 69/302 (22%), Positives = 124/302 (41%), Gaps = 21/302 (6%) Frame = +1 Query: 1 LRWSHTNNGDFSSKTAYDALIREEDPQDTVD--YGWIWKSKTCQRVKHFLWLTARERLPT 174 L W T NGDF+ ++AY+ L E + + + IWK +RV+ F+WL + + T Sbjct: 611 LSWKGTQNGDFTVRSAYELLKPEAEERPLIGSFLKQIWKLVAPERVRVFIWLVSHMVIMT 670 Query: 175 ------KHLLLPGKIEVDPKTCQKEEEDVSHILKDCPIARPTWTALDTVWTPSQTHGQTS 336 +HL V C +E + H+L+DCP P W L ++ Q Sbjct: 671 NVERVRRHLSDIATCSV----CNGADESILHVLRDCPAMTPIWQRLLPQRRQNEFFSQFE 726 Query: 337 YNGYGLAVPRLSCLISSEYLGTPSFPSL--IGLYGGNETRASLTTPQPSPIQESLNRAKE 510 + L ++ +P+L +G++ + R + ++ L K+ Sbjct: 727 W------------LFTNLDPAKGDWPTLFSMGIWWAWKWRCGDVFGERKLCRDRLKFIKD 774 Query: 511 FA----TLDLG*VS---VPSKVAKEVGWTPPPPGWHKLNTXXXXXXXXXXXXXXXVLRNS 669 A +G ++ ++V + + W P W KL T + N Sbjct: 775 IAEEVRKAHVGTLNNHVKRARVERMIRWKAPSDRWVKLTTDGASRGHQGLAAASGAILNL 834 Query: 670 LGQWEQSYSRNLGRTNNSASELWGLRDGLAFAKSLNIQKLEIEIDATLV----SNLVNQL 837 G+W ++ N+G + +ELWG GL A +++E+ +D+ LV S +++ Sbjct: 835 QGEWLGGFALNIGSCDAPLAELWGAYYGLLIAWDKGFRRVELNLDSELVVGFLSTGISKA 894 Query: 838 HP 843 HP Sbjct: 895 HP 896 Score = 21.2 bits (43), Expect(2) = 5e-12 Identities = 10/27 (37%), Positives = 13/27 (48%) Frame = +2 Query: 854 HPFFSIFSDCR*MMTTFAEFRVSHIYR 934 HP + C+ T RVSH+YR Sbjct: 895 HPLSFLVRLCQGFFTRDWLVRVSHVYR 921 >gb|EMJ21971.1| hypothetical protein PRUPE_ppa026532mg [Prunus persica] Length = 334 Score = 78.2 bits (191), Expect = 5e-12 Identities = 63/260 (24%), Positives = 104/260 (40%), Gaps = 2/260 (0%) Frame = +1 Query: 7 WSHTNNGDFSSKTAYDALIREEDPQDTVDYGWIWKSKTCQRVKHFLWLTARERLPTKHLL 186 W T NG FS+K+AY A +E D V + +IW K ++K+FLWL +++L T + Sbjct: 104 WKRTTNGSFSAKSAYMANCQESSSMD-VSWAFIWNIKAPPKIKYFLWLLQQDKLLTNYQR 162 Query: 187 LPGKIEVDPK--TCQKEEEDVSHILKDCPIARPTWTALDTVWTPSQTHGQTSYNGYGLAV 360 + K+ + C E+ +HI+++CP+ W + L Sbjct: 163 VKRKMTMTANFDICGVPMENATHIIRNCPVTISVW-------------------HHSLMP 203 Query: 361 PRLSCLISSEYLGTPSFPSLIGLYGGNETRASLTTPQPSPIQESLNRAKEFATLDLG*VS 540 +S L + + T G N R + L A ++ ++ Sbjct: 204 MNMSLLQAFLWKWTNKIFFDHGFVFPNNPRHVI-----------LMAAADWTQANIEKTR 252 Query: 541 VPSKVAKEVGWTPPPPGWHKLNTXXXXXXXXXXXXXXXVLRNSLGQWEQSYSRNLGRTNN 720 P++ + W P K+NT VLR+S GQW + ++ NLG Sbjct: 253 TPTRSLAMLSWQYPNEEVIKINTDGCRKGEDGRIAAGGVLRDSSGQWMRGFAVNLGVGQV 312 Query: 721 SASELWGLRDGLAFAKSLNI 780 +ELWG+ GL N+ Sbjct: 313 LEAELWGIYLGLKMKNWSNL 332 >ref|XP_004301145.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria vesca subsp. vesca] Length = 411 Score = 70.9 bits (172), Expect(2) = 6e-12 Identities = 66/284 (23%), Positives = 116/284 (40%), Gaps = 8/284 (2%) Frame = +1 Query: 1 LRWSHTNNGDFSSKTAYDALIREEDPQDTVDYGWIWKSKTCQRVKHFLWLTARERLPT-- 174 L W+ T NG FS K+AY++ + + + +WK ++K F+W +++ T Sbjct: 46 LIWNATANGKFSVKSAYNSFFDSAGVSNPL-WTHLWKLNCPPKLKTFMWYVLHQKILTNV 104 Query: 175 KHLLLPGKIEVDPKTCQKEEEDVSHILKDCPIARPTWTALDTVWTPSQTHGQTSYNGYGL 354 + + C+ +E + H+L+DCP ++ W +++ +P S + G Sbjct: 105 QRVRRGFSTIASCPICKNADETLLHLLRDCPRSQAIW---NSILSPGSITNSFSLDWNGW 161 Query: 355 AVPRLSCLI----SSEYLGTPSFPSLIGLYGGNETRASLTTPQPS-PIQESLNRAKEFAT 519 + C + + ++ F N+ P+ P + N E+++ Sbjct: 162 ICAQFHCHVVIKNNIQWCNLFVFVCWFIWKWRNKVIFDPAFILPACPNKVIWNYVDEWSS 221 Query: 520 LDLG*VSVPSKVAKEV-GWTPPPPGWHKLNTXXXXXXXXXXXXXXXVLRNSLGQWEQSYS 696 S+ S + + W PP ++KLN VLR+ LG W + Sbjct: 222 AQSK-ASMQSMFSYTMFSWCKPPENFYKLNIDGSRSFSSGCIGAGGVLRDHLGIWIDGFQ 280 Query: 697 RNLGRTNNSASELWGLRDGLAFAKSLNIQKLEIEIDATLVSNLV 828 NLG +E WGL GL NI LEIE D+ L+ L+ Sbjct: 281 VNLGTGEVLDAEAWGLFFGLRMVAMHNIVNLEIESDSALLVQLM 324 Score = 27.3 bits (59), Expect(2) = 6e-12 Identities = 10/27 (37%), Positives = 14/27 (51%) Frame = +2 Query: 854 HPFFSIFSDCR*MMTTFAEFRVSHIYR 934 HPF S+ C MM+ + HI+R Sbjct: 332 HPFGSLLDSCSVMMSKLLNVNIKHIFR 358 >ref|XP_006470496.1| PREDICTED: uncharacterized protein LOC102617255 [Citrus sinensis] Length = 440 Score = 76.6 bits (187), Expect = 2e-11 Identities = 72/286 (25%), Positives = 117/286 (40%), Gaps = 9/286 (3%) Frame = +1 Query: 7 WSHTNNGDFSSKTAYDALIREEDPQDTVDYGWIWKSKTCQRVKHFLWLTARERLPTKHLL 186 W H G ++ +++Y L D + + +W+ + +VKHF+W + LPT L Sbjct: 94 WMHEAKGVYTVRSSYKMLAPCLDIPSSSIWNQLWRLEVPSKVKHFMWRALTDVLPTTENL 153 Query: 187 LPGKIEVDPK--TCQKEEEDVSHILKDCPIARPTWTALDTVWTPSQTH----GQTSYNGY 348 L +EV P TC E + HIL CP AR W + ++ + +N Y Sbjct: 154 LKKYVEVPPACITCHASSESICHILLQCPFARTCWMTSSIGFFGDGSNLLLWLEALFNRY 213 Query: 349 GLAVPRLSCLISSEYLGTPSFPSLIGLYGGNETRASLTTPQPSPIQESLNRAKEFATLDL 528 L +L+ +I + G G + L + Q L R ++F Sbjct: 214 SLEQTQLAVMICWSLWQNRNDMVWRGKTSG--VQQLLNSAGHFLFQWQLVRKQQFL---- 267 Query: 529 G*VSVPSKVAK-EVGWTPPPPGWHKLNTXXXXXXXXXXXXXXXVLRNSLGQWEQSYSRNL 705 S PS + + W PP G K N V+R+S + + ++ Sbjct: 268 --FSQPSPIGHGAICWEPPVAGRLKCNVDVALFAFRGYIGFGNVIRDSNCAFMAARCCSI 325 Query: 706 -GRTNNSASELWGLRDGLAFAKSLNIQKLEIEIDATLVSN-LVNQL 837 GR + +E G+R+ L++ K L + + IE+D V N LVN L Sbjct: 326 PGRFSARDAEALGVREALSWIKQLQLSNVTIEMDCLTVYNALVNNL 371 >emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1378 Score = 76.3 bits (186), Expect = 2e-11 Identities = 72/292 (24%), Positives = 113/292 (38%), Gaps = 18/292 (6%) Frame = +1 Query: 7 WSHTNNGDFSSKTAYDALIREEDPQDTVDYGW--IWKSKTCQRVKHFLWLTARERLPTKH 180 W+ + +G F+ +A + E W +WK T QRV+ F+WL ++RL T Sbjct: 1013 WNGSPSGGFTIGSAMNITRNAELANMDAHPKWSAVWKIPTPQRVRFFIWLAIQDRLMTNS 1072 Query: 181 LLLPGKIEVDPK--TCQKEEEDVSHILKDCPIARPTWTALDTV------------WTPSQ 318 ++ DP+ C + EE+ HIL+ CP+AR W L + W Sbjct: 1073 NRFLRRLTDDPRCLVCGEVEENTDHILRRCPVARILWRKLGMLGEHNREEINLGSWITKN 1132 Query: 319 THGQTSYNGYGLAVPRLSCLISSEYLGTPSFPSLIGLYGGNETRASLTTPQPSPIQESLN 498 T L V +SC + F S+ Q S I + Sbjct: 1133 LSADTMMGSEWLRVFAVSCWWLWRWRNDRCF----------NRNPSIPIDQVSFIFARVK 1182 Query: 499 RAKEFATLDLG*VSVPSKVAKE--VGWTPPPPGWHKLNTXXXXXXXXXXXXXXXVLRNSL 672 KE + S S KE V W P GW KLNT ++R Sbjct: 1183 EIKEAMDRNDTNKSQHSGRRKEILVRWQCPKEGWVKLNTDGASKGNPGPAGGGGLIRGPR 1242 Query: 673 GQWEQSYSRNLGRTNNSASELWGLRDGLAFAKSLNIQKLEIEIDATLVSNLV 828 G+ + ++ N G + +EL + GL A N +++ + +D+ LV+ L+ Sbjct: 1243 GEIHEVFAINCGSCTCTKAELLAVLRGLMIAWEGNHKQVIVSVDSELVAKLL 1294 >gb|EMJ10020.1| hypothetical protein PRUPE_ppa025050mg [Prunus persica] Length = 241 Score = 59.3 bits (142), Expect(3) = 6e-11 Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 7/133 (5%) Frame = +1 Query: 466 PQPSPIQESLNRAKEFATLDLG*VSVPSKVAKEV---GWTPPPPGWHKLNTXXXXXXXXX 636 P P+P L AKE+ ++ V K+A+EV W+PP KLN Sbjct: 40 PPPNPHHIILQFAKEWFDINK---MVNGKLAREVIQIHWSPPTAAISKLNADGSYKTTSW 96 Query: 637 XXXXXXVLRNSLGQWEQSYSRNLGRTNNSASELWGLRDGLAFAKSLNIQKLEIEID---- 804 +LR+S G W +S N+G N + ELW L GL A + I+ L++E D Sbjct: 97 KITTGGLLRDSHGSWICGFSVNIGIGNIAKGELWSLLKGLQMAWNRGIRSLDVECDFLYV 156 Query: 805 ATLVSNLVNQLHP 843 +L++ + +Q HP Sbjct: 157 VSLMAKVSDQSHP 169 Score = 28.5 bits (62), Expect(3) = 6e-11 Identities = 9/30 (30%), Positives = 17/30 (56%) Frame = +2 Query: 851 THPFFSIFSDCR*MMTTFAEFRVSHIYRRQ 940 +HP + DC+ ++ ++SH+YR Q Sbjct: 167 SHPLLCLIEDCKSLLNRDWSCKISHVYREQ 196 Score = 26.6 bits (57), Expect(3) = 6e-11 Identities = 9/24 (37%), Positives = 13/24 (54%) Frame = +3 Query: 390 IPWNTIFSFTYWTLWRQRNKGIFN 461 +PW +F+ T W W+ R FN Sbjct: 12 LPWVLVFTATIWHCWKWRCISTFN 35 >gb|ABE80133.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago truncatula] Length = 282 Score = 72.4 bits (176), Expect = 3e-10 Identities = 66/281 (23%), Positives = 113/281 (40%), Gaps = 4/281 (1%) Frame = +1 Query: 7 WSHTNNGDFSSKTAYDALIREEDPQDTVDYGW--IWKSKTCQRVKHFLWLTARERLPTKH 180 W TN F+ ++AY+ +++ V W +W K R++ F+WL A R+ T + Sbjct: 29 WGGTNTLQFTVQSAYNL---QQETSFAVGGEWKTLWNWKGPHRIQTFIWLAANGRILTNY 85 Query: 181 LLLPGKIEVDPKT--CQKEEEDVSHILKDCPIARPTWTALDTVWTPSQTHGQTSYNGYGL 354 + + P C +E+E + H+L+DC A T T W ++ + + Sbjct: 86 RRSKWGVGISPTCPCCAREDETIIHVLRDCVHATQT-NFTTTCWYLWNWRNKSIFE---I 141 Query: 355 AVPRLSCLISSEYLGTPSFPSLIGLYGGNETRASLTTPQPSPIQESLNRAKEFATLDLG* 534 R PS P+L+ IQ+ ++ L Sbjct: 142 GFQR------------PSNPTLV-------------------IQKFTREIED--NTKLVH 168 Query: 535 VSVPSKVAKEVGWTPPPPGWHKLNTXXXXXXXXXXXXXXXVLRNSLGQWEQSYSRNLGRT 714 S K +GW PP GW KLN +LR+S G+W + Y + +G Sbjct: 169 KSSHQKETIYIGWMRPPFGWVKLNCDGAWKASGTFAGCGGLLRDSDGRWIKGYFKKIGMC 228 Query: 715 NNSASELWGLRDGLAFAKSLNIQKLEIEIDATLVSNLVNQL 837 + +E+WG+ GL A N L ++ D+ ++S L + + Sbjct: 229 DAFHAEMWGMYLGLDMAWRENTTHLIVDSDSKILSLLFDDI 269 >gb|ABK28199.1| unknown [Arabidopsis thaliana] Length = 315 Score = 63.9 bits (154), Expect(3) = 4e-10 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 4/102 (3%) Frame = +1 Query: 550 KVAKEVGWTPPPPGWHKLNTXXXXXXXXXXXXXXXVLRNSLGQWEQSYSRNLGRTNNSAS 729 +V + + W+ P GW KLNT VLR+ G W ++ N+G + + Sbjct: 139 RVERLIAWSKPEEGWWKLNTDGASRGNPGLASAGGVLRDEEGAWRGGFALNIGVCSAPLA 198 Query: 730 ELWGLRDGLAFAKSLNIQKLEIEIDATLVSNL----VNQLHP 843 ELWG+ GL A + +LEIE+D+ +V +N++HP Sbjct: 199 ELWGVYYGLYIAWERRVTRLEIEVDSEIVVGFLKIGINEVHP 240 Score = 26.2 bits (56), Expect(3) = 4e-10 Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 7/48 (14%) Frame = +3 Query: 336 LQWL-------RFGCSSTKLFDKFRIPWNTIFSFTYWTLWRQRNKGIF 458 L+WL R C ST W+T+F+ + W W+ R IF Sbjct: 64 LEWLFANLGDRRKTCEST---------WSTLFALSIWWAWKWRCGNIF 102 Score = 21.2 bits (43), Expect(3) = 4e-10 Identities = 8/29 (27%), Positives = 14/29 (48%) Frame = +2 Query: 848 DTHPFFSIFSDCR*MMTTFAEFRVSHIYR 934 + HP + C ++ R+SH+YR Sbjct: 237 EVHPLSFLVRLCHDFISRDWRVRISHVYR 265