BLASTX nr result
ID: Catharanthus23_contig00019413
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00019413
(217 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006348568.1| PREDICTED: putative pentatricopeptide repeat... 89 6e-16
ref|XP_004228915.1| PREDICTED: putative pentatricopeptide repeat... 87 2e-15
ref|XP_002308333.2| pentatricopeptide repeat-containing family p... 84 2e-14
ref|XP_002333469.1| predicted protein [Populus trichocarpa] 84 2e-14
gb|EOY08539.1| Pentatricopeptide repeat (PPR) superfamily protei... 82 6e-14
ref|XP_002269283.1| PREDICTED: putative pentatricopeptide repeat... 81 2e-13
emb|CAN61633.1| hypothetical protein VITISV_038790 [Vitis vinifera] 79 6e-13
gb|ESW17764.1| hypothetical protein PHAVU_007G266200g [Phaseolus... 77 3e-12
ref|XP_003518162.1| PREDICTED: putative pentatricopeptide repeat... 74 3e-11
gb|EXC12963.1| hypothetical protein L484_016893 [Morus notabilis] 73 3e-11
ref|XP_004497693.1| PREDICTED: putative pentatricopeptide repeat... 73 3e-11
ref|XP_006481630.1| PREDICTED: putative pentatricopeptide repeat... 71 2e-10
ref|XP_006430030.1| hypothetical protein CICLE_v10010964mg [Citr... 71 2e-10
gb|EMJ05692.1| hypothetical protein PRUPE_ppa019635mg [Prunus pe... 70 3e-10
gb|EPS63838.1| hypothetical protein M569_10945, partial [Genlise... 69 6e-10
ref|XP_002524089.1| pentatricopeptide repeat-containing protein,... 67 2e-09
ref|XP_006399113.1| hypothetical protein EUTSA_v10012543mg [Eutr... 65 1e-08
ref|NP_196258.1| pentatricopeptide repeat-containing protein [Ar... 64 3e-08
ref|XP_002871218.1| pentatricopeptide repeat-containing protein ... 64 3e-08
ref|XP_006286714.1| hypothetical protein CARUB_v10002874mg [Caps... 62 6e-08
>ref|XP_006348568.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Solanum tuberosum]
Length = 1087
Score = 89.0 bits (219), Expect = 6e-16
Identities = 44/66 (66%), Positives = 52/66 (78%)
Frame = -1
Query: 205 QLLKCFAWSGDVAAVYSLGDDMITVSKIPESLVYDFMLKSLCIAGRIREALELIHDMKVK 26
QLLKC A SG++AAV+ +GDDMI V IPE+ VY MLKS CIAGRI EALELI D+K K
Sbjct: 354 QLLKCLANSGNIAAVHKVGDDMIRVCSIPENRVYSLMLKSFCIAGRITEALELIRDLKSK 413
Query: 25 NVHMDS 8
N ++DS
Sbjct: 414 NKNLDS 419
>ref|XP_004228915.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Solanum lycopersicum]
Length = 1092
Score = 87.4 bits (215), Expect = 2e-15
Identities = 43/66 (65%), Positives = 52/66 (78%)
Frame = -1
Query: 205 QLLKCFAWSGDVAAVYSLGDDMITVSKIPESLVYDFMLKSLCIAGRIREALELIHDMKVK 26
QLLKC A SG++AAV+ +GDDMI V IPE+ VY MLKS CI GRI EALELI D+K K
Sbjct: 359 QLLKCLANSGNIAAVHKVGDDMIRVCSIPENHVYRLMLKSFCITGRITEALELIRDLKSK 418
Query: 25 NVHMDS 8
N+++DS
Sbjct: 419 NMNLDS 424
>ref|XP_002308333.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550336797|gb|EEE91856.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 1048
Score = 84.0 bits (206), Expect = 2e-14
Identities = 42/69 (60%), Positives = 53/69 (76%)
Frame = -1
Query: 217 NLYQQLLKCFAWSGDVAAVYSLGDDMITVSKIPESLVYDFMLKSLCIAGRIREALELIHD 38
+LY+ LL C A SGDV+AV S+ DDMI VS+IPE V+ +LKS C+AGRIREALELI D
Sbjct: 310 SLYKMLLNCLAKSGDVSAVQSVADDMIRVSQIPEHDVHVCVLKSYCVAGRIREALELIRD 369
Query: 37 MKVKNVHMD 11
+K K + +D
Sbjct: 370 LKNKEIQLD 378
>ref|XP_002333469.1| predicted protein [Populus trichocarpa]
Length = 1048
Score = 84.0 bits (206), Expect = 2e-14
Identities = 42/69 (60%), Positives = 53/69 (76%)
Frame = -1
Query: 217 NLYQQLLKCFAWSGDVAAVYSLGDDMITVSKIPESLVYDFMLKSLCIAGRIREALELIHD 38
+LY+ LL C A SGDV+AV S+ DDMI VS+IPE V+ +LKS C+AGRIREALELI D
Sbjct: 310 SLYKMLLNCLAKSGDVSAVQSVADDMIRVSQIPEHDVHVCVLKSYCVAGRIREALELIRD 369
Query: 37 MKVKNVHMD 11
+K K + +D
Sbjct: 370 LKNKEIQLD 378
>gb|EOY08539.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao]
Length = 1050
Score = 82.4 bits (202), Expect = 6e-14
Identities = 39/69 (56%), Positives = 54/69 (78%)
Frame = -1
Query: 217 NLYQQLLKCFAWSGDVAAVYSLGDDMITVSKIPESLVYDFMLKSLCIAGRIREALELIHD 38
NLY+ LL C A SG+ AAV+ + D+M+ VS++PE VY ++LKS CI+GRIREALELI D
Sbjct: 312 NLYKMLLNCLAKSGNNAAVHLVADNMMRVSQVPEQEVYGYVLKSFCISGRIREALELIRD 371
Query: 37 MKVKNVHMD 11
+K K++ +D
Sbjct: 372 LKEKDLSLD 380
>ref|XP_002269283.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Vitis vinifera]
Length = 1048
Score = 80.9 bits (198), Expect = 2e-13
Identities = 41/71 (57%), Positives = 51/71 (71%)
Frame = -1
Query: 217 NLYQQLLKCFAWSGDVAAVYSLGDDMITVSKIPESLVYDFMLKSLCIAGRIREALELIHD 38
+LY+ LL C A SGD+A V + DDMI S+IPE V+ MLKS CIAGRIREALELI D
Sbjct: 311 SLYELLLTCLAGSGDIAGVQLVADDMIRRSQIPERDVFSCMLKSFCIAGRIREALELIRD 370
Query: 37 MKVKNVHMDSN 5
+ KN+ ++ N
Sbjct: 371 LNDKNLTLEPN 381
>emb|CAN61633.1| hypothetical protein VITISV_038790 [Vitis vinifera]
Length = 570
Score = 79.0 bits (193), Expect = 6e-13
Identities = 38/71 (53%), Positives = 51/71 (71%)
Frame = -1
Query: 217 NLYQQLLKCFAWSGDVAAVYSLGDDMITVSKIPESLVYDFMLKSLCIAGRIREALELIHD 38
+LY+ LL C A GD+ V + DDMI S+IP+ V+ +MLKS CI+GRIREALELIHD
Sbjct: 291 SLYELLLICLAGCGDIVGVQLVADDMIRRSQIPKRDVFSYMLKSFCISGRIREALELIHD 350
Query: 37 MKVKNVHMDSN 5
+ KN+ ++ N
Sbjct: 351 LNDKNLTLEPN 361
>gb|ESW17764.1| hypothetical protein PHAVU_007G266200g [Phaseolus vulgaris]
Length = 1069
Score = 76.6 bits (187), Expect = 3e-12
Identities = 38/68 (55%), Positives = 52/68 (76%)
Frame = -1
Query: 214 LYQQLLKCFAWSGDVAAVYSLGDDMITVSKIPESLVYDFMLKSLCIAGRIREALELIHDM 35
LY+ ++ C A SGDVAAV LG+DMI +S +PE+ V+ MLKS CI+GRI EALELI D+
Sbjct: 332 LYKTIMNCMARSGDVAAVSLLGNDMIRLSVMPENGVHSCMLKSFCISGRIEEALELIRDL 391
Query: 34 KVKNVHMD 11
K K++ ++
Sbjct: 392 KNKDLDVE 399
>ref|XP_003518162.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Glycine max]
Length = 1034
Score = 73.6 bits (179), Expect = 3e-11
Identities = 35/68 (51%), Positives = 50/68 (73%)
Frame = -1
Query: 214 LYQQLLKCFAWSGDVAAVYSLGDDMITVSKIPESLVYDFMLKSLCIAGRIREALELIHDM 35
LY+ ++ C A SGD+AAV LG+DMI +S +PE V+ MLKS CI+G I EALELI ++
Sbjct: 297 LYKMVMNCMARSGDIAAVSLLGNDMIRLSVMPEKCVHGCMLKSFCISGSIEEALELIREL 356
Query: 34 KVKNVHMD 11
K K++ ++
Sbjct: 357 KSKDLDLE 364
>gb|EXC12963.1| hypothetical protein L484_016893 [Morus notabilis]
Length = 1039
Score = 73.2 bits (178), Expect = 3e-11
Identities = 35/66 (53%), Positives = 49/66 (74%)
Frame = -1
Query: 217 NLYQQLLKCFAWSGDVAAVYSLGDDMITVSKIPESLVYDFMLKSLCIAGRIREALELIHD 38
+LY+ LL C A SGD A V+ + DDM+ VS+I + +VY ++KS CI+GRIR+ALE I D
Sbjct: 302 SLYKMLLSCIARSGDSAGVHLVADDMVKVSQILDHIVYGCVVKSFCISGRIRDALEFIRD 361
Query: 37 MKVKNV 20
+K K+V
Sbjct: 362 LKDKDV 367
>ref|XP_004497693.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Cicer arietinum]
Length = 1045
Score = 73.2 bits (178), Expect = 3e-11
Identities = 36/68 (52%), Positives = 49/68 (72%)
Frame = -1
Query: 214 LYQQLLKCFAWSGDVAAVYSLGDDMITVSKIPESLVYDFMLKSLCIAGRIREALELIHDM 35
LY+ L+ C A SGDV AV LG+DM + +PE+ + MLKS CI+GRI+EALELI D+
Sbjct: 307 LYKMLMNCLAKSGDVEAVSLLGNDMTRLCLMPENSILGCMLKSFCISGRIKEALELIRDL 366
Query: 34 KVKNVHMD 11
K K+V ++
Sbjct: 367 KYKDVVLE 374
>ref|XP_006481630.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Citrus sinensis]
Length = 1040
Score = 70.9 bits (172), Expect = 2e-10
Identities = 34/69 (49%), Positives = 48/69 (69%)
Frame = -1
Query: 217 NLYQQLLKCFAWSGDVAAVYSLGDDMITVSKIPESLVYDFMLKSLCIAGRIREALELIHD 38
+LY+ ++ C A GDV AV S+ DDM+ +S+IPE Y +LKS C++ RIREALE I +
Sbjct: 301 SLYKIVMNCAAKLGDVDAVLSIADDMVRISQIPERDAYGCVLKSFCVSMRIREALEFIRN 360
Query: 37 MKVKNVHMD 11
+K K + MD
Sbjct: 361 LKSKEISMD 369
>ref|XP_006430030.1| hypothetical protein CICLE_v10010964mg [Citrus clementina]
gi|557532087|gb|ESR43270.1| hypothetical protein
CICLE_v10010964mg [Citrus clementina]
Length = 1040
Score = 70.9 bits (172), Expect = 2e-10
Identities = 34/69 (49%), Positives = 48/69 (69%)
Frame = -1
Query: 217 NLYQQLLKCFAWSGDVAAVYSLGDDMITVSKIPESLVYDFMLKSLCIAGRIREALELIHD 38
+LY+ ++ C A GDV AV S+ DDM+ +S+IPE Y +LKS C++ RIREALE I +
Sbjct: 301 SLYKIVMNCAAKLGDVDAVLSIADDMVRISQIPERDAYGCVLKSFCVSMRIREALEFIRN 360
Query: 37 MKVKNVHMD 11
+K K + MD
Sbjct: 361 LKSKEISMD 369
>gb|EMJ05692.1| hypothetical protein PRUPE_ppa019635mg [Prunus persica]
Length = 893
Score = 70.1 bits (170), Expect = 3e-10
Identities = 36/66 (54%), Positives = 46/66 (69%)
Frame = -1
Query: 217 NLYQQLLKCFAWSGDVAAVYSLGDDMITVSKIPESLVYDFMLKSLCIAGRIREALELIHD 38
NLY+ LL A SG+ AV + DDMI VS+IPE +VY +LK CI+GRI+EALE I +
Sbjct: 154 NLYKLLLNGIARSGETGAVALVSDDMIRVSQIPEHIVYGSVLKCFCISGRIKEALEFIRE 213
Query: 37 MKVKNV 20
+K K V
Sbjct: 214 LKNKEV 219
>gb|EPS63838.1| hypothetical protein M569_10945, partial [Genlisea aurea]
Length = 913
Score = 68.9 bits (167), Expect = 6e-10
Identities = 35/71 (49%), Positives = 49/71 (69%)
Frame = -1
Query: 214 LYQQLLKCFAWSGDVAAVYSLGDDMITVSKIPESLVYDFMLKSLCIAGRIREALELIHDM 35
+Y++LL+ A+SG+V AV S+G++M +S+IPES MLKSLC AGRI E+LELI D
Sbjct: 182 VYKRLLQSLAFSGNVDAVRSIGEEMTKLSEIPESRAQSLMLKSLCTAGRIEESLELIGDA 241
Query: 34 KVKNVHMDSNS 2
K +D +
Sbjct: 242 MNKGTALDDTA 252
>ref|XP_002524089.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223536657|gb|EEF38299.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1072
Score = 67.4 bits (163), Expect = 2e-09
Identities = 36/69 (52%), Positives = 50/69 (72%)
Frame = -1
Query: 217 NLYQQLLKCFAWSGDVAAVYSLGDDMITVSKIPESLVYDFMLKSLCIAGRIREALELIHD 38
+LY+ LL A SGDV AV+ + +DM +S+IPE V +LKS C+AG+IREALELI D
Sbjct: 316 SLYKILLISMAKSGDVGAVHLVANDMSRLSQIPEHDVNVCILKSFCVAGKIREALELIRD 375
Query: 37 MKVKNVHMD 11
+K K++ +D
Sbjct: 376 LKNKDILID 384
>ref|XP_006399113.1| hypothetical protein EUTSA_v10012543mg [Eutrema salsugineum]
gi|557100203|gb|ESQ40566.1| hypothetical protein
EUTSA_v10012543mg [Eutrema salsugineum]
Length = 1036
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/68 (47%), Positives = 46/68 (67%)
Frame = -1
Query: 211 YQQLLKCFAWSGDVAAVYSLGDDMITVSKIPESLVYDFMLKSLCIAGRIREALELIHDMK 32
Y+ LL C A S + V S+ DDMI + +I E + ++LKS CI+G+IREALELI ++K
Sbjct: 302 YKMLLDCTAKSEKLDIVQSIADDMIRICEISEHDAFGYLLKSFCISGKIREALELIRELK 361
Query: 31 VKNVHMDS 8
K V +D+
Sbjct: 362 NKEVGLDA 369
>ref|NP_196258.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171850|sp|Q9FNG8.1|PP366_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing
protein At5g06400, mitochondrial; Flags: Precursor
gi|9758420|dbj|BAB08962.1| unnamed protein product
[Arabidopsis thaliana] gi|332003627|gb|AED91010.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 1030
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/68 (42%), Positives = 46/68 (67%)
Frame = -1
Query: 211 YQQLLKCFAWSGDVAAVYSLGDDMITVSKIPESLVYDFMLKSLCIAGRIREALELIHDMK 32
Y+ LL C A S V V S+ DDM+ + +I E + ++LKS C++G+I+EALELI ++K
Sbjct: 297 YKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELK 356
Query: 31 VKNVHMDS 8
K + +D+
Sbjct: 357 NKEMCLDA 364
>ref|XP_002871218.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297317055|gb|EFH47477.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1029
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/68 (42%), Positives = 46/68 (67%)
Frame = -1
Query: 211 YQQLLKCFAWSGDVAAVYSLGDDMITVSKIPESLVYDFMLKSLCIAGRIREALELIHDMK 32
Y+ LL C A S V V S+ DDM+ + +I E + ++LKS C++G+I+EALELI ++K
Sbjct: 296 YKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELK 355
Query: 31 VKNVHMDS 8
K + +D+
Sbjct: 356 NKEMCLDA 363
>ref|XP_006286714.1| hypothetical protein CARUB_v10002874mg [Capsella rubella]
gi|482555420|gb|EOA19612.1| hypothetical protein
CARUB_v10002874mg [Capsella rubella]
Length = 1016
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/68 (42%), Positives = 45/68 (66%)
Frame = -1
Query: 211 YQQLLKCFAWSGDVAAVYSLGDDMITVSKIPESLVYDFMLKSLCIAGRIREALELIHDMK 32
Y+ LL C S V V S+ DDM+ + +I E + ++LKS C++G+I+EALELI ++K
Sbjct: 291 YKMLLDCITQSEKVDVVQSIVDDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELK 350
Query: 31 VKNVHMDS 8
K V +D+
Sbjct: 351 NKEVCLDA 358