BLASTX nr result
ID: Catharanthus23_contig00019234
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00019234
(1041 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004235443.1| PREDICTED: pentatricopeptide repeat-containi... 90 2e-15
emb|CBI39452.3| unnamed protein product [Vitis vinifera] 86 2e-14
ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containi... 86 2e-14
emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera] 86 2e-14
ref|XP_006358175.1| PREDICTED: pentatricopeptide repeat-containi... 85 5e-14
ref|XP_002511627.1| pentatricopeptide repeat-containing protein,... 79 4e-12
ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 77 1e-11
ref|XP_004510607.1| PREDICTED: pentatricopeptide repeat-containi... 76 2e-11
ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containi... 76 2e-11
gb|EOX96382.1| Tetratricopeptide repeat (TPR)-like superfamily p... 75 6e-11
gb|EPS68740.1| hypothetical protein M569_06021 [Genlisea aurea] 72 4e-10
ref|XP_003622527.1| Pentatricopeptide repeat-containing protein ... 72 4e-10
ref|XP_006375239.1| hypothetical protein POPTR_0014s05550g [Popu... 70 1e-09
ref|XP_002326829.1| predicted protein [Populus trichocarpa] 70 1e-09
ref|XP_006836847.1| hypothetical protein AMTR_s00099p00074160 [A... 69 2e-09
ref|XP_006592806.1| PREDICTED: pentatricopeptide repeat-containi... 69 3e-09
ref|XP_003539494.2| PREDICTED: pentatricopeptide repeat-containi... 69 3e-09
ref|XP_006592805.1| PREDICTED: pentatricopeptide repeat-containi... 69 3e-09
ref|XP_004308525.1| PREDICTED: pentatricopeptide repeat-containi... 69 3e-09
gb|ESW10402.1| hypothetical protein PHAVU_009G206300g [Phaseolus... 67 2e-08
>ref|XP_004235443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Solanum lycopersicum]
Length = 710
Score = 89.7 bits (221), Expect = 2e-15
Identities = 41/64 (64%), Positives = 52/64 (81%)
Frame = -1
Query: 1038 IDLGVCSTVLVSLCKIRKVHEAFELYYELLEQGVQPPLSCLEHLRMSLEAEGRIKEAEFV 859
+++ CST+L +LCK R+ EAFE+YYELLE+GVQ PL C+E L ++LE EGRIKEAEFV
Sbjct: 645 LNVDTCSTLLSALCKARRASEAFEIYYELLEKGVQQPLECIEELGLALETEGRIKEAEFV 704
Query: 858 SKRI 847
KRI
Sbjct: 705 KKRI 708
>emb|CBI39452.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 85.9 bits (211), Expect = 2e-14
Identities = 42/74 (56%), Positives = 57/74 (77%)
Frame = -1
Query: 1038 IDLGVCSTVLVSLCKIRKVHEAFELYYELLEQGVQPPLSCLEHLRMSLEAEGRIKEAEFV 859
+D+ +CSTV+ LCK KV EAF LYYEL+E+G+Q L+C E LR+SLEAEGR+ EA+FV
Sbjct: 632 VDIDMCSTVISGLCKAHKVSEAFALYYELVEKGMQHRLTCQEDLRISLEAEGRLNEAKFV 691
Query: 858 SKRIMRQLPRDTSS 817
SK+ M ++P+ S
Sbjct: 692 SKK-MPEVPKQWQS 704
>ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Vitis vinifera]
Length = 746
Score = 85.9 bits (211), Expect = 2e-14
Identities = 42/74 (56%), Positives = 57/74 (77%)
Frame = -1
Query: 1038 IDLGVCSTVLVSLCKIRKVHEAFELYYELLEQGVQPPLSCLEHLRMSLEAEGRIKEAEFV 859
+D+ +CSTV+ LCK KV EAF LYYEL+E+G+Q L+C E LR+SLEAEGR+ EA+FV
Sbjct: 660 VDIDMCSTVISGLCKAHKVSEAFALYYELVEKGMQHRLTCQEDLRISLEAEGRLNEAKFV 719
Query: 858 SKRIMRQLPRDTSS 817
SK+ M ++P+ S
Sbjct: 720 SKK-MPEVPKQWQS 732
>emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]
Length = 1024
Score = 85.9 bits (211), Expect = 2e-14
Identities = 42/74 (56%), Positives = 57/74 (77%)
Frame = -1
Query: 1038 IDLGVCSTVLVSLCKIRKVHEAFELYYELLEQGVQPPLSCLEHLRMSLEAEGRIKEAEFV 859
+D+ +CSTV+ LCK KV EAF LYYEL+E+G+Q L+C E LR+SLEAEGR+ EA+FV
Sbjct: 717 VDIDMCSTVISGLCKAHKVSEAFALYYELVEKGMQHRLTCQEDLRISLEAEGRLNEAKFV 776
Query: 858 SKRIMRQLPRDTSS 817
SK+ M ++P+ S
Sbjct: 777 SKK-MPEVPKQWQS 789
>ref|XP_006358175.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like isoform X1 [Solanum tuberosum]
Length = 718
Score = 84.7 bits (208), Expect = 5e-14
Identities = 40/67 (59%), Positives = 51/67 (76%)
Frame = -1
Query: 1038 IDLGVCSTVLVSLCKIRKVHEAFELYYELLEQGVQPPLSCLEHLRMSLEAEGRIKEAEFV 859
+++ CST+L +LCK + EAFE+YYELLE+GVQ PL C+E L ++LE EGR KEAEFV
Sbjct: 651 LNVDTCSTLLSALCKASRTLEAFEIYYELLEKGVQQPLECVEELGLALETEGRTKEAEFV 710
Query: 858 SKRIMRQ 838
KRI Q
Sbjct: 711 KKRIPGQ 717
>ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223548807|gb|EEF50296.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1163
Score = 78.6 bits (192), Expect = 4e-12
Identities = 34/64 (53%), Positives = 51/64 (79%)
Frame = -1
Query: 1038 IDLGVCSTVLVSLCKIRKVHEAFELYYELLEQGVQPPLSCLEHLRMSLEAEGRIKEAEFV 859
+D+ +C TV+ LCK+++ EAF LYYEL+E+G PL CLE+LR++LEA GR++E +F+
Sbjct: 651 VDIDMCDTVIEGLCKMKRHSEAFGLYYELVEKGNNQPLRCLENLRVALEARGRLEEVKFL 710
Query: 858 SKRI 847
SKR+
Sbjct: 711 SKRM 714
>ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02060, chloroplastic-like [Cucumis sativus]
Length = 720
Score = 76.6 bits (187), Expect = 1e-11
Identities = 35/74 (47%), Positives = 53/74 (71%)
Frame = -1
Query: 1038 IDLGVCSTVLVSLCKIRKVHEAFELYYELLEQGVQPPLSCLEHLRMSLEAEGRIKEAEFV 859
+D+ +C+TV+ LC+I K+ EAF LYY+L+E GV LSC L++SL+A G+++EAE V
Sbjct: 644 VDMDLCNTVIFQLCEINKLSEAFSLYYKLVEMGVHQQLSCQNQLKVSLKAGGKLEEAESV 703
Query: 858 SKRIMRQLPRDTSS 817
KR+ R+L S+
Sbjct: 704 QKRMERRLKSKNSN 717
>ref|XP_004510607.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Cicer arietinum]
Length = 740
Score = 75.9 bits (185), Expect = 2e-11
Identities = 40/85 (47%), Positives = 53/85 (62%)
Frame = -1
Query: 1041 RIDLGVCSTVLVSLCKIRKVHEAFELYYELLEQGVQPPLSCLEHLRMSLEAEGRIKEAEF 862
+ D+ +C+TV++ LCKI K EAF L YEL+E+G+ L C+ L +LEA GR EA F
Sbjct: 653 KFDIDLCNTVILDLCKINKASEAFSLCYELVEKGLNHDLICINDLVAALEAGGRTAEAAF 712
Query: 861 VSKRIMRQLPRDTSSSN*SSMQRFP 787
+SKRI R D S N SS + P
Sbjct: 713 ISKRIPRTEHLDRSERNNSSKKLRP 737
>ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Cucumis sativus]
Length = 757
Score = 75.9 bits (185), Expect = 2e-11
Identities = 34/64 (53%), Positives = 49/64 (76%)
Frame = -1
Query: 1038 IDLGVCSTVLVSLCKIRKVHEAFELYYELLEQGVQPPLSCLEHLRMSLEAEGRIKEAEFV 859
+D+ +C+TV+ LC+I K+ EAF LYY+L+E GV LSC L++SLEA +++EAEFV
Sbjct: 644 VDMDLCNTVIFQLCEINKLSEAFSLYYKLVEMGVHQQLSCQNQLKVSLEAGEKLEEAEFV 703
Query: 858 SKRI 847
SKR+
Sbjct: 704 SKRM 707
>gb|EOX96382.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
[Theobroma cacao]
Length = 724
Score = 74.7 bits (182), Expect = 6e-11
Identities = 34/64 (53%), Positives = 49/64 (76%)
Frame = -1
Query: 1038 IDLGVCSTVLVSLCKIRKVHEAFELYYELLEQGVQPPLSCLEHLRMSLEAEGRIKEAEFV 859
+D+ +CS V+ LC +++ EAF LYYEL+E+G L CLE+L+++LEA GR+ EAEFV
Sbjct: 655 VDIEMCSMVIEGLCNSKRLSEAFGLYYELVERGKHQQLRCLENLKIALEAGGRLDEAEFV 714
Query: 858 SKRI 847
SKR+
Sbjct: 715 SKRM 718
>gb|EPS68740.1| hypothetical protein M569_06021 [Genlisea aurea]
Length = 766
Score = 72.0 bits (175), Expect = 4e-10
Identities = 36/62 (58%), Positives = 45/62 (72%)
Frame = -1
Query: 1026 VCSTVLVSLCKIRKVHEAFELYYELLEQGVQPPLSCLEHLRMSLEAEGRIKEAEFVSKRI 847
+C TVL LC+ + + EAF LYYELLE+ Q P +CL LR LE+ G++KEAEFVSKRI
Sbjct: 693 LCDTVLFRLCEGKMLSEAFGLYYELLEKDFQGPFNCLIDLRNGLESVGKLKEAEFVSKRI 752
Query: 846 MR 841
R
Sbjct: 753 PR 754
>ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497542|gb|AES78745.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 721
Score = 72.0 bits (175), Expect = 4e-10
Identities = 33/66 (50%), Positives = 47/66 (71%)
Frame = -1
Query: 1038 IDLGVCSTVLVSLCKIRKVHEAFELYYELLEQGVQPPLSCLEHLRMSLEAEGRIKEAEFV 859
ID+G+C+ V++ LCK+ K EAF L YEL+++G+ L CL L +LEA GR +EA F+
Sbjct: 650 IDIGLCNIVILDLCKLNKASEAFSLCYELVDKGLHQDLICLNDLVAALEAGGRTEEAAFI 709
Query: 858 SKRIMR 841
SKR+ R
Sbjct: 710 SKRVPR 715
>ref|XP_006375239.1| hypothetical protein POPTR_0014s05550g [Populus trichocarpa]
gi|550323558|gb|ERP53036.1| hypothetical protein
POPTR_0014s05550g [Populus trichocarpa]
Length = 728
Score = 70.5 bits (171), Expect = 1e-09
Identities = 34/64 (53%), Positives = 47/64 (73%)
Frame = -1
Query: 1038 IDLGVCSTVLVSLCKIRKVHEAFELYYELLEQGVQPPLSCLEHLRMSLEAEGRIKEAEFV 859
+D+ VC+ V+ LCK+++ EAF LYY L+E+ LSCLE LR +LEA GR +EA+FV
Sbjct: 656 VDINVCNVVIEGLCKMKRPLEAFGLYYMLVEKSNHQQLSCLEGLRTALEAGGRSEEAKFV 715
Query: 858 SKRI 847
SKR+
Sbjct: 716 SKRM 719
>ref|XP_002326829.1| predicted protein [Populus trichocarpa]
Length = 664
Score = 70.5 bits (171), Expect = 1e-09
Identities = 34/64 (53%), Positives = 47/64 (73%)
Frame = -1
Query: 1038 IDLGVCSTVLVSLCKIRKVHEAFELYYELLEQGVQPPLSCLEHLRMSLEAEGRIKEAEFV 859
+D+ VC+ V+ LCK+++ EAF LYY L+E+ LSCLE LR +LEA GR +EA+FV
Sbjct: 592 VDINVCNVVIEGLCKMKRPLEAFGLYYMLVEKSNHQQLSCLEGLRTALEAGGRSEEAKFV 651
Query: 858 SKRI 847
SKR+
Sbjct: 652 SKRM 655
>ref|XP_006836847.1| hypothetical protein AMTR_s00099p00074160 [Amborella trichopoda]
gi|548839411|gb|ERM99700.1| hypothetical protein
AMTR_s00099p00074160 [Amborella trichopoda]
Length = 715
Score = 69.3 bits (168), Expect = 2e-09
Identities = 32/66 (48%), Positives = 45/66 (68%)
Frame = -1
Query: 1038 IDLGVCSTVLVSLCKIRKVHEAFELYYELLEQGVQPPLSCLEHLRMSLEAEGRIKEAEFV 859
+D+G S V+ LCK ++ +AF LYYE++E+G QP CL L +L +EGR+KEAEFV
Sbjct: 644 LDIGPYSRVIRGLCKTKRTKDAFSLYYEMVERGRQPDEGCLRELMAALNSEGRLKEAEFV 703
Query: 858 SKRIMR 841
+K R
Sbjct: 704 AKLTSR 709
>ref|XP_006592806.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like isoform X3 [Glycine max]
Length = 734
Score = 68.9 bits (167), Expect = 3e-09
Identities = 31/66 (46%), Positives = 47/66 (71%)
Frame = -1
Query: 1038 IDLGVCSTVLVSLCKIRKVHEAFELYYELLEQGVQPPLSCLEHLRMSLEAEGRIKEAEFV 859
+D+ +C+ +++LCKI KV EAF L YEL+E G+ L+CL+ L +LE G+ +EA F+
Sbjct: 645 VDIDLCNATILNLCKINKVSEAFSLCYELVENGLHQELTCLDDLIAALEEGGKREEAAFI 704
Query: 858 SKRIMR 841
SKR+ R
Sbjct: 705 SKRLPR 710
>ref|XP_003539494.2| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like isoform X1 [Glycine max]
Length = 741
Score = 68.9 bits (167), Expect = 3e-09
Identities = 31/66 (46%), Positives = 47/66 (71%)
Frame = -1
Query: 1038 IDLGVCSTVLVSLCKIRKVHEAFELYYELLEQGVQPPLSCLEHLRMSLEAEGRIKEAEFV 859
+D+ +C+ +++LCKI KV EAF L YEL+E G+ L+CL+ L +LE G+ +EA F+
Sbjct: 643 VDIDLCNATILNLCKINKVSEAFSLCYELVENGLHQELTCLDDLIAALEEGGKREEAAFI 702
Query: 858 SKRIMR 841
SKR+ R
Sbjct: 703 SKRLPR 708
>ref|XP_006592805.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like isoform X2 [Glycine max]
Length = 743
Score = 68.9 bits (167), Expect = 3e-09
Identities = 31/66 (46%), Positives = 47/66 (71%)
Frame = -1
Query: 1038 IDLGVCSTVLVSLCKIRKVHEAFELYYELLEQGVQPPLSCLEHLRMSLEAEGRIKEAEFV 859
+D+ +C+ +++LCKI KV EAF L YEL+E G+ L+CL+ L +LE G+ +EA F+
Sbjct: 645 VDIDLCNATILNLCKINKVSEAFSLCYELVENGLHQELTCLDDLIAALEEGGKREEAAFI 704
Query: 858 SKRIMR 841
SKR+ R
Sbjct: 705 SKRLPR 710
>ref|XP_004308525.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 1128
Score = 68.9 bits (167), Expect = 3e-09
Identities = 32/64 (50%), Positives = 43/64 (67%)
Frame = -1
Query: 1038 IDLGVCSTVLVSLCKIRKVHEAFELYYELLEQGVQPPLSCLEHLRMSLEAEGRIKEAEFV 859
+ + + V++ LC+I K+ EAF LYYEL+E G L CL HL+ SLE GR EA+FV
Sbjct: 650 VSIDILDQVILGLCEINKLREAFGLYYELIENGDHGQLPCLHHLKSSLEVAGRSVEADFV 709
Query: 858 SKRI 847
SKR+
Sbjct: 710 SKRM 713
>gb|ESW10402.1| hypothetical protein PHAVU_009G206300g [Phaseolus vulgaris]
Length = 728
Score = 66.6 bits (161), Expect = 2e-08
Identities = 32/76 (42%), Positives = 48/76 (63%)
Frame = -1
Query: 1038 IDLGVCSTVLVSLCKIRKVHEAFELYYELLEQGVQPPLSCLEHLRMSLEAEGRIKEAEFV 859
+D+ +C+ ++++LCK KV EAF L Y L+E G+ L+CL L +LE GR +EA F+
Sbjct: 642 VDIDLCNAIVLNLCKANKVSEAFNLCYGLVENGLCQELTCLNDLMAALEERGRREEAVFI 701
Query: 858 SKRIMRQLPRDTSSSN 811
SKR+ + D S N
Sbjct: 702 SKRLPKLENSDGSKGN 717