BLASTX nr result
ID: Catharanthus23_contig00019124
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus23_contig00019124 (329 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004295618.1| PREDICTED: uncharacterized protein LOC101300... 72 8e-11 gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis] 66 6e-09 >ref|XP_004295618.1| PREDICTED: uncharacterized protein LOC101300039 [Fragaria vesca subsp. vesca] Length = 556 Score = 72.0 bits (175), Expect = 8e-11 Identities = 44/121 (36%), Positives = 59/121 (48%), Gaps = 12/121 (9%) Frame = +2 Query: 2 LETQIGQLANAISRRDEGKLPSHPIENPRA-----------NYHEQAKAVITLRNGKLVD 148 LE QIGQLA + R++GK PS P+ NP+ N HEQ +++ TLR+GK VD Sbjct: 11 LEQQIGQLATVVGEREKGKFPSQPLPNPKGQFQISEPSSSLNSHEQVQSIATLRSGKQVD 70 Query: 149 NKVGEP-IKDSKLNNNETDGIYMTKIERKIEKELASSSNSKTLESSPTASYKPKVPYPQA 325 NKV P + D N DG T + A + + P +Y PK +PQ Sbjct: 71 NKVQMPDLDDEAPINKSKDGEVPTSPDN--HSSSAPKIRTHPVADQPVRNYVPKALFPQR 128 Query: 326 L 328 L Sbjct: 129 L 129 >gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis] Length = 1788 Score = 65.9 bits (159), Expect = 6e-09 Identities = 42/117 (35%), Positives = 60/117 (51%), Gaps = 8/117 (6%) Frame = +2 Query: 2 LETQIGQLANAISRRDEGKLPSHPIENPR-----ANYHEQAKAVITLRNGKLVDNKVGEP 166 LETQ+GQLA A+S R++GK PS P+ NP+ +N Q A+ TLR+GK +DN+V P Sbjct: 362 LETQLGQLAAAVSEREKGKFPSQPVANPKDTGSSSNNPAQLNAIHTLRSGKQIDNQVRMP 421 Query: 167 IKD--SKLNNNETDGIYMTKIERKIEKELASSSNSKTLESSPTAS-YKPKVPYPQAL 328 S + N +D + + S + LE P Y+P P+P L Sbjct: 422 PDQTPSPIQNTPSD------------ETIPSDDQNAELEIEPDLDRYRPVAPFPDRL 466