BLASTX nr result

ID: Catharanthus23_contig00019123 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00019123
         (340 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]     69   6e-10
gb|ABD63180.1| F7F22.15, related [Asparagus officinalis]               67   3e-09
ref|XP_004295618.1| PREDICTED: uncharacterized protein LOC101300...    62   1e-07

>gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 1788

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 39/83 (46%), Positives = 56/83 (67%), Gaps = 6/83 (7%)
 Frame = +2

Query: 44  STLKSLGVKT-QILDSHIQSIAKLETQICQLDNAISRRDEGKLPSHPIENPR-----ANY 205
           +TL S    T Q+L+S+ Q+IA+LETQ+ QL  A+S R++GK PS P+ NP+     +N 
Sbjct: 339 TTLNSFMQTTGQVLNSNTQAIARLETQLGQLAAAVSEREKGKFPSQPVANPKDTGSSSNN 398

Query: 206 H*QAKAVITLRNGKLVDNKVREP 274
             Q  A+ TLR+GK +DN+VR P
Sbjct: 399 PAQLNAIHTLRSGKQIDNQVRMP 421


>gb|ABD63180.1| F7F22.15, related [Asparagus officinalis]
          Length = 481

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 37/83 (44%), Positives = 56/83 (67%), Gaps = 6/83 (7%)
 Frame = +2

Query: 44  STLKSLGVKT-QILDSHIQSIAKLETQICQLDNAISRRDEGKLPSHPIENPR-----ANY 205
           STL S    T Q+L+S+ Q+IA+LE+Q+ QL +A+S R++ K PS P+ NP      ++Y
Sbjct: 90  STLNSFMQSTGQMLNSNTQAIARLESQLSQLASAVSEREKEKFPSQPVVNPNNTGCSSSY 149

Query: 206 H*QAKAVITLRNGKLVDNKVREP 274
             Q  A+ +LR+G+ VDN+VR P
Sbjct: 150 EAQVNAIHSLRSGRQVDNQVRTP 172


>ref|XP_004295618.1| PREDICTED: uncharacterized protein LOC101300039 [Fragaria vesca
           subsp. vesca]
          Length = 556

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 11/89 (12%)
 Frame = +2

Query: 95  QSIAKLETQICQLDNAISRRDEGKLPSHPIENPRA-----------NYH*QAKAVITLRN 241
           Q+I+KLE QI QL   +  R++GK PS P+ NP+            N H Q +++ TLR+
Sbjct: 6   QAISKLEQQIGQLATVVGEREKGKFPSQPLPNPKGQFQISEPSSSLNSHEQVQSIATLRS 65

Query: 242 GKLVDNKVREPIKDRDLNENEIEGIDIET 328
           GK VDNKV+ P  D +   N+ +  ++ T
Sbjct: 66  GKQVDNKVQMPDLDDEAPINKSKDGEVPT 94


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