BLASTX nr result

ID: Catharanthus23_contig00018995 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00018995
         (524 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006350189.1| PREDICTED: uncharacterized protein LOC102605...    48   2e-07
ref|XP_004236611.1| PREDICTED: uncharacterized protein LOC101244...    48   2e-07

>ref|XP_006350189.1| PREDICTED: uncharacterized protein LOC102605422 [Solanum tuberosum]
          Length = 771

 Score = 47.8 bits (112), Expect(3) = 2e-07
 Identities = 22/30 (73%), Positives = 26/30 (86%)
 Frame = +1

Query: 358 LKMQA*LGFRVVNYLPYNLYIRKMDGYLFA 447
           L+MQA LGFRVV+YLPY+ Y+RK  GYLFA
Sbjct: 167 LEMQAKLGFRVVDYLPYDSYVRKTVGYLFA 196



 Score = 26.6 bits (57), Expect(3) = 2e-07
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +3

Query: 237 IHATTDKFTPFANFPSKQ*IVFSFS 311
           I A  DK TP+ANF S++ +V S S
Sbjct: 103 IPAILDKSTPYANFRSEKWVVVSVS 127



 Score = 25.4 bits (54), Expect(3) = 2e-07
 Identities = 11/14 (78%), Positives = 11/14 (78%)
 Frame = +2

Query: 314 DYPSDSLHKLAGIK 355
           DYPSDSL KL  IK
Sbjct: 128 DYPSDSLRKLGRIK 141


>ref|XP_004236611.1| PREDICTED: uncharacterized protein LOC101244478 [Solanum
           lycopersicum]
          Length = 771

 Score = 47.8 bits (112), Expect(3) = 2e-07
 Identities = 22/30 (73%), Positives = 26/30 (86%)
 Frame = +1

Query: 358 LKMQA*LGFRVVNYLPYNLYIRKMDGYLFA 447
           L+MQA LGFRVV+YLPY+ Y+RK  GYLFA
Sbjct: 167 LEMQAKLGFRVVDYLPYDSYVRKTVGYLFA 196



 Score = 26.6 bits (57), Expect(3) = 2e-07
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +3

Query: 237 IHATTDKFTPFANFPSKQ*IVFSFS 311
           I A  DK TP+ANF S++ +V S S
Sbjct: 103 IPAILDKSTPYANFRSEKWVVVSVS 127



 Score = 25.4 bits (54), Expect(3) = 2e-07
 Identities = 11/14 (78%), Positives = 11/14 (78%)
 Frame = +2

Query: 314 DYPSDSLHKLAGIK 355
           DYPSDSL KL  IK
Sbjct: 128 DYPSDSLRKLGRIK 141


Top