BLASTX nr result

ID: Catharanthus23_contig00018945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00018945
         (468 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006341423.1| PREDICTED: AP2-like ethylene-responsive tran...    56   4e-06
ref|XP_004305469.1| PREDICTED: AP2-like ethylene-responsive tran...    56   6e-06
ref|XP_006385937.1| hypothetical protein POPTR_0003s18350g [Popu...    55   7e-06
ref|XP_002303866.1| AP2 domain-containing transcription factor [...    55   7e-06

>ref|XP_006341423.1| PREDICTED: AP2-like ethylene-responsive transcription factor
           At1g16060-like [Solanum tuberosum]
          Length = 364

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 35/70 (50%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
 Frame = +1

Query: 55  KFKEMLERTSSVADXXXXXXXXXXXXXX--DDIQTYFDCNDSGRFCDDDDHDNIFGDLAS 228
           KFKEMLERTS V +                DDIQTYFDC +S  F   ++HD IFGDL S
Sbjct: 295 KFKEMLERTSEVIECPETPPEPDRPRRSFPDDIQTYFDCQESSSFI--EEHDIIFGDLDS 352

Query: 229 ---AMFPCEL 249
               MF CEL
Sbjct: 353 LTLPMFQCEL 362


>ref|XP_004305469.1| PREDICTED: AP2-like ethylene-responsive transcription factor
           At1g16060-like [Fragaria vesca subsp. vesca]
          Length = 364

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 35/73 (47%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
 Frame = +1

Query: 55  KFKEMLERTSSVADXXXXXXXXXXXXXX---DDIQTYFDCNDSGRFCDDDDHDNIFGDL- 222
           KFKEMLERTS  AD                 DDIQTYFDC D   + + D  D IFG+L 
Sbjct: 294 KFKEMLERTSVAADCSSSTTSEPNMPRRSFPDDIQTYFDCQDLNSYAEGD--DVIFGELN 351

Query: 223 --ASAMFPCELDS 255
             AS++F CELD+
Sbjct: 352 SFASSVFHCELDA 364


>ref|XP_006385937.1| hypothetical protein POPTR_0003s18350g [Populus trichocarpa]
           gi|550343451|gb|ERP63734.1| hypothetical protein
           POPTR_0003s18350g [Populus trichocarpa]
          Length = 354

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 36/72 (50%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
 Frame = +1

Query: 55  KFKEMLERTSSV---ADXXXXXXXXXXXXXXDDIQTYFDCNDSGRFCDDDDHDNIFGDL- 222
           KFKEMLERTS+                    DDIQTYFDC DS  + D D  D IFGDL 
Sbjct: 284 KFKEMLERTSASDCPLTPPESDRDPPRRSFPDDIQTYFDCQDSSSYTDGD--DIIFGDLH 341

Query: 223 --ASAMFPCELD 252
             AS +F CELD
Sbjct: 342 SFASPIFHCELD 353


>ref|XP_002303866.1| AP2 domain-containing transcription factor [Populus trichocarpa]
          Length = 275

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 36/72 (50%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
 Frame = +1

Query: 55  KFKEMLERTSSV---ADXXXXXXXXXXXXXXDDIQTYFDCNDSGRFCDDDDHDNIFGDL- 222
           KFKEMLERTS+                    DDIQTYFDC DS  + D D  D IFGDL 
Sbjct: 205 KFKEMLERTSASDCPLTPPESDRDPPRRSFPDDIQTYFDCQDSSSYTDGD--DIIFGDLH 262

Query: 223 --ASAMFPCELD 252
             AS +F CELD
Sbjct: 263 SFASPIFHCELD 274


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