BLASTX nr result

ID: Catharanthus23_contig00018888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00018888
         (264 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXC35358.1| hypothetical protein L484_026683 [Morus notabilis]      60   2e-07
ref|XP_003520257.1| PREDICTED: putative DNA helicase INO80-like ...    60   2e-07
gb|ACU24175.1| unknown [Glycine max]                                   60   2e-07
ref|NP_001241612.1| uncharacterized protein LOC100799995 [Glycin...    60   4e-07
ref|XP_006383108.1| hypothetical protein POPTR_0005s11620g [Popu...    57   2e-06
ref|XP_002327660.1| predicted protein [Populus trichocarpa]            57   2e-06
ref|XP_003517176.1| PREDICTED: uncharacterized protein LOC100818...    57   3e-06
ref|XP_003612165.1| hypothetical protein MTR_5g022010 [Medicago ...    57   3e-06
ref|XP_002267782.1| PREDICTED: uncharacterized protein LOC100266...    56   4e-06
ref|XP_003629329.1| hypothetical protein MTR_8g075950 [Medicago ...    56   4e-06
emb|CAN79682.1| hypothetical protein VITISV_026022 [Vitis vinifera]    56   4e-06
ref|XP_004512133.1| PREDICTED: E3 ubiquitin-protein ligase HUWE1...    56   6e-06
gb|AFK46137.1| unknown [Lotus japonicus]                               56   6e-06
ref|XP_003538878.1| PREDICTED: uncharacterized protein LOC100805...    56   6e-06
gb|ESW29911.1| hypothetical protein PHAVU_002G108800g [Phaseolus...    55   1e-05
gb|EMJ05560.1| hypothetical protein PRUPE_ppa007215mg [Prunus pe...    55   1e-05

>gb|EXC35358.1| hypothetical protein L484_026683 [Morus notabilis]
          Length = 340

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 37/69 (53%), Positives = 43/69 (62%)
 Frame = -3

Query: 226 VSKISMAGGEKKPMAKFAGKHTRFCYNSXXXXXXXXXEVGSCCKSNESPVMRLKGLPTPK 47
           +SKISM    +KP+ KF GKHTRF YNS         E  +C  S    V+RL GLPTPK
Sbjct: 278 LSKISM---NEKPLPKFEGKHTRFVYNSDDEIIEEENE--ACSPS----VLRLNGLPTPK 328

Query: 46  GKHLRFPDE 20
           GKHLRF +E
Sbjct: 329 GKHLRFLEE 337


>ref|XP_003520257.1| PREDICTED: putative DNA helicase INO80-like [Glycine max]
          Length = 354

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 34/60 (56%), Positives = 37/60 (61%)
 Frame = -3

Query: 181 KFAGKHTRFCYNSXXXXXXXXXEVGSCCKSNESPVMRLKGLPTPKGKHLRFPDE*SSSQL 2
           K  GKHTRF Y+S          V  CC   ES VM LKGLPTPKGKHLRFP+E  +S L
Sbjct: 299 KGCGKHTRFVYDSEDDEIVEK--VVECCA--ESDVMHLKGLPTPKGKHLRFPEEEENSDL 354


>gb|ACU24175.1| unknown [Glycine max]
          Length = 354

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 34/60 (56%), Positives = 37/60 (61%)
 Frame = -3

Query: 181 KFAGKHTRFCYNSXXXXXXXXXEVGSCCKSNESPVMRLKGLPTPKGKHLRFPDE*SSSQL 2
           K  GKHTRF Y+S          V  CC   ES VM LKGLPTPKGKHLRFP+E  +S L
Sbjct: 299 KGCGKHTRFVYDSEDDEIVEK--VVECCA--ESDVMHLKGLPTPKGKHLRFPEEEENSDL 354


>ref|NP_001241612.1| uncharacterized protein LOC100799995 [Glycine max]
           gi|255634875|gb|ACU17796.1| unknown [Glycine max]
          Length = 355

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 34/58 (58%), Positives = 36/58 (62%)
 Frame = -3

Query: 181 KFAGKHTRFCYNSXXXXXXXXXEVGSCCKSNESPVMRLKGLPTPKGKHLRFPDE*SSS 8
           K  GKHTRF Y+S          V  CC   ES VMRLKGLPTPKGKHLRFP E  +S
Sbjct: 300 KGCGKHTRFVYDSEDEIVEK---VIECCA--ESDVMRLKGLPTPKGKHLRFPQEEENS 352


>ref|XP_006383108.1| hypothetical protein POPTR_0005s11620g [Populus trichocarpa]
           gi|550338685|gb|ERP60905.1| hypothetical protein
           POPTR_0005s11620g [Populus trichocarpa]
          Length = 434

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 32/66 (48%), Positives = 37/66 (56%)
 Frame = -3

Query: 217 ISMAGGEKKPMAKFAGKHTRFCYNSXXXXXXXXXEVGSCCKSNESPVMRLKGLPTPKGKH 38
           IS    ++K MAKF GKHTRF YNS         + G          +RLKGLPTPKGKH
Sbjct: 374 ISQISVKEKAMAKFEGKHTRFVYNSDDEIVEEVVDCGD-------DDLRLKGLPTPKGKH 426

Query: 37  LRFPDE 20
           +RF  E
Sbjct: 427 IRFHTE 432


>ref|XP_002327660.1| predicted protein [Populus trichocarpa]
          Length = 370

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 32/66 (48%), Positives = 37/66 (56%)
 Frame = -3

Query: 217 ISMAGGEKKPMAKFAGKHTRFCYNSXXXXXXXXXEVGSCCKSNESPVMRLKGLPTPKGKH 38
           IS    ++K MAKF GKHTRF YNS         + G          +RLKGLPTPKGKH
Sbjct: 310 ISQISVKEKAMAKFEGKHTRFVYNSDDEIVEEVVDCGD-------DDLRLKGLPTPKGKH 362

Query: 37  LRFPDE 20
           +RF  E
Sbjct: 363 IRFHTE 368


>ref|XP_003517176.1| PREDICTED: uncharacterized protein LOC100818852 [Glycine max]
          Length = 343

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 29/54 (53%), Positives = 33/54 (61%)
 Frame = -3

Query: 181 KFAGKHTRFCYNSXXXXXXXXXEVGSCCKSNESPVMRLKGLPTPKGKHLRFPDE 20
           KF GKHTRF YNS         E       + S ++RLKGLPTPKGKHLRF +E
Sbjct: 283 KFEGKHTRFAYNSDDEIVKEEVEENFGESDSSSNILRLKGLPTPKGKHLRFYEE 336


>ref|XP_003612165.1| hypothetical protein MTR_5g022010 [Medicago truncatula]
           gi|355513500|gb|AES95123.1| hypothetical protein
           MTR_5g022010 [Medicago truncatula]
          Length = 289

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 30/59 (50%), Positives = 36/59 (61%)
 Frame = -3

Query: 196 KKPMAKFAGKHTRFCYNSXXXXXXXXXEVGSCCKSNESPVMRLKGLPTPKGKHLRFPDE 20
           +K + KFAGKHTRF YNS         +      S+   V+ LKGLPTPKGKHLRF +E
Sbjct: 225 EKVVPKFAGKHTRFVYNSDDELVSEEEDESGNADSHN--VLHLKGLPTPKGKHLRFSEE 281


>ref|XP_002267782.1| PREDICTED: uncharacterized protein LOC100266022 [Vitis vinifera]
          Length = 338

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 36/69 (52%), Positives = 39/69 (56%)
 Frame = -3

Query: 226 VSKISMAGGEKKPMAKFAGKHTRFCYNSXXXXXXXXXEVGSCCKSNESPVMRLKGLPTPK 47
           +SKIS+   E    AK  GKHTRF YNS         E GS        V+ LKGLPTPK
Sbjct: 277 MSKISV--NENGIAAKSRGKHTRFVYNSDDELVEEEEEKGS------PGVLHLKGLPTPK 328

Query: 46  GKHLRFPDE 20
           GKHLRFP E
Sbjct: 329 GKHLRFPTE 337


>ref|XP_003629329.1| hypothetical protein MTR_8g075950 [Medicago truncatula]
           gi|355523351|gb|AET03805.1| hypothetical protein
           MTR_8g075950 [Medicago truncatula]
          Length = 342

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 33/75 (44%), Positives = 42/75 (56%)
 Frame = -3

Query: 226 VSKISMAGGEKKPMAKFAGKHTRFCYNSXXXXXXXXXEVGSCCKSNESPVMRLKGLPTPK 47
           +S I +  G   P  KFAGKHTRF Y+S            S   ++E  ++ LKGLPTPK
Sbjct: 272 LSNIGVNEGNVVP--KFAGKHTRFLYDSDEDEIVEEVVEESADSNSE--ILHLKGLPTPK 327

Query: 46  GKHLRFPDE*SSSQL 2
           GKH+RF +E   S L
Sbjct: 328 GKHIRFSEEEEKSDL 342


>emb|CAN79682.1| hypothetical protein VITISV_026022 [Vitis vinifera]
          Length = 841

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 36/69 (52%), Positives = 39/69 (56%)
 Frame = -3

Query: 226 VSKISMAGGEKKPMAKFAGKHTRFCYNSXXXXXXXXXEVGSCCKSNESPVMRLKGLPTPK 47
           +SKIS+   E    AK  GKHTRF YNS         E GS        V+ LKGLPTPK
Sbjct: 780 MSKISV--NENGIAAKSRGKHTRFVYNSDDELVEEEEEKGS------PGVLHLKGLPTPK 831

Query: 46  GKHLRFPDE 20
           GKHLRFP E
Sbjct: 832 GKHLRFPTE 840


>ref|XP_004512133.1| PREDICTED: E3 ubiquitin-protein ligase HUWE1-like [Cicer arietinum]
          Length = 324

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/59 (47%), Positives = 38/59 (64%)
 Frame = -3

Query: 196 KKPMAKFAGKHTRFCYNSXXXXXXXXXEVGSCCKSNESPVMRLKGLPTPKGKHLRFPDE 20
           ++ + KFAGKHTRF YNS         +V     ++ + ++RLKGLPTP+GKHLRF  E
Sbjct: 263 ERVVPKFAGKHTRFVYNSDDELVKEEEDV----TADSTNILRLKGLPTPEGKHLRFSQE 317


>gb|AFK46137.1| unknown [Lotus japonicus]
          Length = 335

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/59 (49%), Positives = 38/59 (64%)
 Frame = -3

Query: 196 KKPMAKFAGKHTRFCYNSXXXXXXXXXEVGSCCKSNESPVMRLKGLPTPKGKHLRFPDE 20
           ++ + KF+GKHTRF YNS          V S   S+++ V+ L GLPTPKGKHLRF +E
Sbjct: 273 ERAVPKFSGKHTRFVYNSDEELVEEVEVVMSESDSSDN-VLHLMGLPTPKGKHLRFSEE 330


>ref|XP_003538878.1| PREDICTED: uncharacterized protein LOC100805416 [Glycine max]
          Length = 346

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/54 (51%), Positives = 34/54 (62%)
 Frame = -3

Query: 181 KFAGKHTRFCYNSXXXXXXXXXEVGSCCKSNESPVMRLKGLPTPKGKHLRFPDE 20
           KF GKHTRF YNS         E      ++ + ++RLKGLPTPKGKHLRF +E
Sbjct: 286 KFEGKHTRFVYNSDDEIVKEEVEENFGESASSTKILRLKGLPTPKGKHLRFYEE 339


>gb|ESW29911.1| hypothetical protein PHAVU_002G108800g [Phaseolus vulgaris]
          Length = 296

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 34/70 (48%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
 Frame = -3

Query: 226 VSKISMAGGEKKPMAKFAGKHTRFCYNSXXXXXXXXXEVGSCCKSNESP-VMRLKGLPTP 50
           ++KI+M   E+ P  KF GKHTRF YNS         E      ++  P ++ LKGLPTP
Sbjct: 220 LNKINM--NERIP-PKFEGKHTRFVYNSDDEIVKEEVEENCAQNASSQPNILCLKGLPTP 276

Query: 49  KGKHLRFPDE 20
           KGKHLRF DE
Sbjct: 277 KGKHLRFYDE 286


>gb|EMJ05560.1| hypothetical protein PRUPE_ppa007215mg [Prunus persica]
          Length = 377

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/64 (46%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
 Frame = -3

Query: 199 EKKPMAKFAGKHTRFCYNSXXXXXXXXXEVGSCCKSNESPV----MRLKGLPTPKGKHLR 32
           EKK + KFAGKHTRF Y+S         +  +    + + V    +RLKGLPTPKGKH+R
Sbjct: 312 EKKMIPKFAGKHTRFVYDSEDDIEIVEEDFSAESPDSGAVVSPSALRLKGLPTPKGKHMR 371

Query: 31  FPDE 20
           F +E
Sbjct: 372 FLEE 375


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