BLASTX nr result
ID: Catharanthus23_contig00018762
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00018762
(1141 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004237507.1| PREDICTED: pentatricopeptide repeat-containi... 80 2e-12
ref|XP_006340477.1| PREDICTED: pentatricopeptide repeat-containi... 80 2e-12
ref|XP_002329310.1| predicted protein [Populus trichocarpa] gi|5... 76 3e-11
gb|EOY04353.1| Tetratricopeptide repeat (TPR)-like superfamily p... 75 5e-11
gb|EMJ09454.1| hypothetical protein PRUPE_ppa016546mg [Prunus pe... 75 5e-11
ref|XP_006482334.1| PREDICTED: pentatricopeptide repeat-containi... 72 5e-10
ref|XP_006430873.1| hypothetical protein CICLE_v10011342mg [Citr... 72 5e-10
ref|XP_004288209.1| PREDICTED: pentatricopeptide repeat-containi... 71 9e-10
ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containi... 70 2e-09
emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera] 70 2e-09
ref|XP_003545840.1| PREDICTED: pentatricopeptide repeat-containi... 69 5e-09
emb|CBI16890.3| unnamed protein product [Vitis vinifera] 68 6e-09
gb|EXB85827.1| hypothetical protein L484_009673 [Morus notabilis] 65 5e-08
ref|XP_003627859.1| Pentatricopeptide repeat-containing protein ... 64 9e-08
ref|XP_002532893.1| pentatricopeptide repeat-containing protein,... 64 9e-08
gb|ESW05761.1| hypothetical protein PHAVU_011G207300g [Phaseolus... 62 3e-07
ref|XP_006282941.1| hypothetical protein CARUB_v10007510mg [Caps... 62 4e-07
ref|XP_006594395.1| PREDICTED: pentatricopeptide repeat-containi... 61 1e-06
ref|XP_006405706.1| hypothetical protein EUTSA_v10028323mg [Eutr... 60 2e-06
ref|NP_198689.1| pentatricopeptide repeat-containing protein [Ar... 60 2e-06
>ref|XP_004237507.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Solanum lycopersicum]
Length = 588
Score = 80.1 bits (196), Expect = 2e-12
Identities = 33/61 (54%), Positives = 51/61 (83%)
Frame = +1
Query: 1 GNMSAASVLLDEMYKKRLMVTVKIYKSLNASFASDRSFLDVFWGNLLERGLMSKTTYNHI 180
G + AAS LLD+MYK+RLM+T+K+YKS NAS++ + + L++FW N+++RGL+S+T Y+ I
Sbjct: 524 GKVDAASYLLDDMYKRRLMITLKMYKSFNASYSDENTLLNMFWSNVVQRGLISRTVYDEI 583
Query: 181 Q 183
Q
Sbjct: 584 Q 584
>ref|XP_006340477.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Solanum tuberosum]
Length = 588
Score = 79.7 bits (195), Expect = 2e-12
Identities = 33/61 (54%), Positives = 50/61 (81%)
Frame = +1
Query: 1 GNMSAASVLLDEMYKKRLMVTVKIYKSLNASFASDRSFLDVFWGNLLERGLMSKTTYNHI 180
G + AAS LLD+MYK+R M+T+K+YKS NAS++ + + LD+FW N+++RGL+S+T Y+ I
Sbjct: 524 GKVDAASYLLDDMYKRRQMITLKMYKSFNASYSDENTLLDMFWSNVVQRGLISRTVYDEI 583
Query: 181 Q 183
Q
Sbjct: 584 Q 584
>ref|XP_002329310.1| predicted protein [Populus trichocarpa]
gi|566213342|ref|XP_006373499.1| hypothetical protein
POPTR_0017s14300g [Populus trichocarpa]
gi|550320321|gb|ERP51296.1| hypothetical protein
POPTR_0017s14300g [Populus trichocarpa]
Length = 593
Score = 75.9 bits (185), Expect = 3e-11
Identities = 35/61 (57%), Positives = 46/61 (75%)
Frame = +1
Query: 1 GNMSAASVLLDEMYKKRLMVTVKIYKSLNASFASDRSFLDVFWGNLLERGLMSKTTYNHI 180
G ++ S +LDEMYKKRLM+T+KIY+S NAS+ASD S L +FW ++LER LMSK +
Sbjct: 533 GKVNVTSDILDEMYKKRLMITLKIYRSFNASYASDNSILSLFWNHVLERRLMSKNILKDM 592
Query: 181 Q 183
Q
Sbjct: 593 Q 593
>gb|EOY04353.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 593
Score = 75.1 bits (183), Expect = 5e-11
Identities = 34/62 (54%), Positives = 48/62 (77%)
Frame = +1
Query: 1 GNMSAASVLLDEMYKKRLMVTVKIYKSLNASFASDRSFLDVFWGNLLERGLMSKTTYNHI 180
G ++AAS +L+EMYK+RLM+T+KIY+ NAS+A D S L FW +++ERGLMSK+ I
Sbjct: 527 GKVNAASDVLNEMYKRRLMITLKIYRCFNASYADDNSILGFFWNHVVERGLMSKSILKDI 586
Query: 181 QE 186
Q+
Sbjct: 587 QQ 588
>gb|EMJ09454.1| hypothetical protein PRUPE_ppa016546mg [Prunus persica]
Length = 589
Score = 75.1 bits (183), Expect = 5e-11
Identities = 35/58 (60%), Positives = 43/58 (74%)
Frame = +1
Query: 1 GNMSAASVLLDEMYKKRLMVTVKIYKSLNASFASDRSFLDVFWGNLLERGLMSKTTYN 174
G S SVLLDEMYK+RLMVT KIY+ NAS+ASD + +FW +++ERGLMSK N
Sbjct: 526 GKSSVVSVLLDEMYKRRLMVTRKIYRCFNASYASDNDIIRLFWDHMVERGLMSKNVIN 583
>ref|XP_006482334.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Citrus sinensis]
Length = 592
Score = 71.6 bits (174), Expect = 5e-10
Identities = 30/61 (49%), Positives = 46/61 (75%)
Frame = +1
Query: 1 GNMSAASVLLDEMYKKRLMVTVKIYKSLNASFASDRSFLDVFWGNLLERGLMSKTTYNHI 180
G A S +LD+MY++RLM+T+KIY+S +AS+A D LD+FW ++++RGLMSK + +
Sbjct: 528 GEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEM 587
Query: 181 Q 183
Q
Sbjct: 588 Q 588
>ref|XP_006430873.1| hypothetical protein CICLE_v10011342mg [Citrus clementina]
gi|557532930|gb|ESR44113.1| hypothetical protein
CICLE_v10011342mg [Citrus clementina]
Length = 592
Score = 71.6 bits (174), Expect = 5e-10
Identities = 30/61 (49%), Positives = 46/61 (75%)
Frame = +1
Query: 1 GNMSAASVLLDEMYKKRLMVTVKIYKSLNASFASDRSFLDVFWGNLLERGLMSKTTYNHI 180
G A S +LD+MY++RLM+T+KIY+S +AS+A D LD+FW ++++RGLMSK + +
Sbjct: 528 GEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEM 587
Query: 181 Q 183
Q
Sbjct: 588 Q 588
>ref|XP_004288209.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Fragaria vesca subsp. vesca]
Length = 589
Score = 70.9 bits (172), Expect = 9e-10
Identities = 33/55 (60%), Positives = 43/55 (78%)
Frame = +1
Query: 1 GNMSAASVLLDEMYKKRLMVTVKIYKSLNASFASDRSFLDVFWGNLLERGLMSKT 165
G S S +LDEM+K+RLMVT KIY+S NAS+AS+ L +FW +++ERGLMSKT
Sbjct: 526 GKSSVVSRMLDEMFKRRLMVTRKIYRSFNASYASESDILCLFWNHMVERGLMSKT 580
>ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Vitis vinifera]
Length = 590
Score = 69.7 bits (169), Expect = 2e-09
Identities = 33/65 (50%), Positives = 48/65 (73%)
Frame = +1
Query: 1 GNMSAASVLLDEMYKKRLMVTVKIYKSLNASFASDRSFLDVFWGNLLERGLMSKTTYNHI 180
G AAS +LDEM K+RLM+T+KIY+ +AS+A D S L +FW +++ER L+SK +I
Sbjct: 524 GKAIAASDMLDEMDKRRLMITLKIYRCFSASYAGDGSILGLFWDHVIERRLISKNILKYI 583
Query: 181 QELEV 195
Q+L+V
Sbjct: 584 QQLDV 588
>emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
Length = 590
Score = 69.7 bits (169), Expect = 2e-09
Identities = 33/65 (50%), Positives = 48/65 (73%)
Frame = +1
Query: 1 GNMSAASVLLDEMYKKRLMVTVKIYKSLNASFASDRSFLDVFWGNLLERGLMSKTTYNHI 180
G AAS +LDEM K+RLM+T+KIY+ +AS+A D S L +FW +++ER L+SK +I
Sbjct: 524 GKAIAASDMLDEMDKRRLMITLKIYRCFSASYAGDGSILGLFWDHVIERRLISKNILKYI 583
Query: 181 QELEV 195
Q+L+V
Sbjct: 584 QQLDV 588
>ref|XP_003545840.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Glycine max]
Length = 587
Score = 68.6 bits (166), Expect = 5e-09
Identities = 29/62 (46%), Positives = 47/62 (75%)
Frame = +1
Query: 1 GNMSAASVLLDEMYKKRLMVTVKIYKSLNASFASDRSFLDVFWGNLLERGLMSKTTYNHI 180
GN+SAAS +L+EM ++RLM+TVK+Y+ + S A++ +FW ++++RGLMS+ T N I
Sbjct: 523 GNVSAASSMLEEMARRRLMITVKLYRCFSTSDANENKVSQIFWNHVMDRGLMSRNTMNKI 582
Query: 181 QE 186
Q+
Sbjct: 583 QQ 584
>emb|CBI16890.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 68.2 bits (165), Expect = 6e-09
Identities = 32/64 (50%), Positives = 47/64 (73%)
Frame = +1
Query: 1 GNMSAASVLLDEMYKKRLMVTVKIYKSLNASFASDRSFLDVFWGNLLERGLMSKTTYNHI 180
G AAS +LDEM K+RLM+T+KIY+ +AS+A D S L +FW +++ER L+SK +I
Sbjct: 517 GKAIAASDMLDEMDKRRLMITLKIYRCFSASYAGDGSILGLFWDHVIERRLISKNILKYI 576
Query: 181 QELE 192
Q+L+
Sbjct: 577 QQLD 580
>gb|EXB85827.1| hypothetical protein L484_009673 [Morus notabilis]
Length = 584
Score = 65.1 bits (157), Expect = 5e-08
Identities = 28/61 (45%), Positives = 44/61 (72%)
Frame = +1
Query: 1 GNMSAASVLLDEMYKKRLMVTVKIYKSLNASFASDRSFLDVFWGNLLERGLMSKTTYNHI 180
G + A +LDEMYK+RLM+T KIY+S N S+A+D + + +FW +++ER LMS++ +
Sbjct: 522 GKLGDAEAMLDEMYKRRLMITRKIYRSFNDSYATDDNIMRMFWDHMVERRLMSRSLLKEM 581
Query: 181 Q 183
Q
Sbjct: 582 Q 582
>ref|XP_003627859.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355521881|gb|AET02335.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 731
Score = 64.3 bits (155), Expect = 9e-08
Identities = 35/75 (46%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Frame = +1
Query: 1 GNMSAASVLLDEMYKKRLMVTVKIYKSLNASFASDRSFLDVFWGNLLERGLMSKTTYNHI 180
GN +AAS +L+EM ++RLM+TVKIY+ +A AS +FW +++ERGLMS+ T I
Sbjct: 527 GNTNAASDMLEEMARRRLMITVKIYRCFSALDASQNKVSQMFWDHVVERGLMSRNTMYKI 586
Query: 181 QELEV*S*G-QSYFL 222
Q++ S G Q FL
Sbjct: 587 QQMPFISSGYQRVFL 601
>ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223527353|gb|EEF29498.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 625
Score = 64.3 bits (155), Expect = 9e-08
Identities = 28/47 (59%), Positives = 39/47 (82%)
Frame = +1
Query: 1 GNMSAASVLLDEMYKKRLMVTVKIYKSLNASFASDRSFLDVFWGNLL 141
G +AAS LLDEMYK+RLM+T+KIY++LNAS+A D S L +FW +++
Sbjct: 527 GKANAASDLLDEMYKRRLMITLKIYRALNASYAGDNSILSLFWNHVV 573
>gb|ESW05761.1| hypothetical protein PHAVU_011G207300g [Phaseolus vulgaris]
gi|561006768|gb|ESW05762.1| hypothetical protein
PHAVU_011G207300g [Phaseolus vulgaris]
gi|561006769|gb|ESW05763.1| hypothetical protein
PHAVU_011G207300g [Phaseolus vulgaris]
Length = 587
Score = 62.4 bits (150), Expect = 3e-07
Identities = 28/63 (44%), Positives = 46/63 (73%)
Frame = +1
Query: 1 GNMSAASVLLDEMYKKRLMVTVKIYKSLNASFASDRSFLDVFWGNLLERGLMSKTTYNHI 180
GN SAA +L+EM ++RLM+TVK+Y+ + S AS+ +FW ++++RGLMS+ + N I
Sbjct: 523 GNASAALGVLEEMTRRRLMITVKLYRCFSTSDASENKVSLLFWNHVVDRGLMSRNSMNKI 582
Query: 181 QEL 189
Q++
Sbjct: 583 QQM 585
>ref|XP_006282941.1| hypothetical protein CARUB_v10007510mg [Capsella rubella]
gi|482551646|gb|EOA15839.1| hypothetical protein
CARUB_v10007510mg [Capsella rubella]
Length = 606
Score = 62.0 bits (149), Expect = 4e-07
Identities = 26/55 (47%), Positives = 42/55 (76%)
Frame = +1
Query: 1 GNMSAASVLLDEMYKKRLMVTVKIYKSLNASFASDRSFLDVFWGNLLERGLMSKT 165
GN++ AS L D+MY +R+MV +K+YKS++AS+A D+ L FW ++ +R L+SK+
Sbjct: 531 GNVTEASALFDKMYNRRIMVNLKLYKSISASYAGDKDVLRFFWSHVGDRSLISKS 585
>ref|XP_006594395.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like isoform X1 [Glycine max]
gi|571499072|ref|XP_006594396.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g38730-like isoform X2 [Glycine max]
gi|571499074|ref|XP_006594397.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g38730-like isoform X3 [Glycine max]
gi|571499076|ref|XP_006594398.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g38730-like isoform X4 [Glycine max]
gi|571499078|ref|XP_006594399.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g38730-like isoform X5 [Glycine max]
gi|571499080|ref|XP_006594400.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g38730-like isoform X6 [Glycine max]
Length = 587
Score = 60.8 bits (146), Expect = 1e-06
Identities = 27/62 (43%), Positives = 43/62 (69%)
Frame = +1
Query: 1 GNMSAASVLLDEMYKKRLMVTVKIYKSLNASFASDRSFLDVFWGNLLERGLMSKTTYNHI 180
GN+ AAS +L+EM ++RLM+TVK+Y+ + S A + FW ++++RGLMS+ T I
Sbjct: 523 GNVRAASSMLEEMARRRLMITVKLYRCFSTSDAHENKVSQFFWNHVVDRGLMSRNTMYKI 582
Query: 181 QE 186
Q+
Sbjct: 583 QQ 584
>ref|XP_006405706.1| hypothetical protein EUTSA_v10028323mg [Eutrema salsugineum]
gi|557106844|gb|ESQ47159.1| hypothetical protein
EUTSA_v10028323mg [Eutrema salsugineum]
Length = 619
Score = 60.1 bits (144), Expect = 2e-06
Identities = 29/65 (44%), Positives = 42/65 (64%)
Frame = +1
Query: 1 GNMSAASVLLDEMYKKRLMVTVKIYKSLNASFASDRSFLDVFWGNLLERGLMSKTTYNHI 180
G ++ AS L D MY +RLMV +K+YKSL+AS+A D L FW ++ +R L+SK+ +
Sbjct: 554 GKVTEASALFDIMYNRRLMVNLKLYKSLSASYAGDNEVLRFFWSHVGDRCLISKSILREM 613
Query: 181 QELEV 195
EV
Sbjct: 614 NRSEV 618
>ref|NP_198689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171307|sp|Q9FKR3.1|PP404_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g38730 gi|10176899|dbj|BAB10131.1| unnamed protein
product [Arabidopsis thaliana]
gi|332006971|gb|AED94354.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 59.7 bits (143), Expect = 2e-06
Identities = 28/65 (43%), Positives = 42/65 (64%)
Frame = +1
Query: 1 GNMSAASVLLDEMYKKRLMVTVKIYKSLNASFASDRSFLDVFWGNLLERGLMSKTTYNHI 180
G ++ AS L D MY +RLMV +K+YKS++AS+A D L FW ++ +R L+SK+ +
Sbjct: 531 GKVTEASALFDVMYNRRLMVNLKLYKSISASYAGDNDVLRFFWSHVGDRCLISKSILREM 590
Query: 181 QELEV 195
EV
Sbjct: 591 NRSEV 595