BLASTX nr result
ID: Catharanthus23_contig00018759
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00018759
(496 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ18360.1| hypothetical protein PRUPE_ppa001868mg [Prunus pe... 87 3e-15
ref|XP_004293160.1| PREDICTED: pentatricopeptide repeat-containi... 84 2e-14
gb|EOY03567.1| Pentatricopeptide repeat-containing protein, puta... 84 3e-14
ref|XP_006848707.1| hypothetical protein AMTR_s00177p00030400 [A... 78 1e-12
gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays] 76 4e-12
ref|XP_002301797.2| pentatricopeptide repeat-containing family p... 74 2e-11
ref|XP_004953844.1| PREDICTED: pentatricopeptide repeat-containi... 74 2e-11
ref|XP_004964651.1| PREDICTED: pentatricopeptide repeat-containi... 74 3e-11
ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat... 73 3e-11
ref|XP_002454322.1| hypothetical protein SORBIDRAFT_04g028670 [S... 72 1e-10
ref|XP_002437979.1| hypothetical protein SORBIDRAFT_10g005810 [S... 71 1e-10
gb|ABR16216.1| unknown [Picea sitchensis] 70 2e-10
ref|XP_006479255.1| PREDICTED: putative pentatricopeptide repeat... 70 3e-10
ref|XP_006443577.1| hypothetical protein CICLE_v10019402mg [Citr... 70 3e-10
ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containi... 70 3e-10
dbj|BAK05894.1| predicted protein [Hordeum vulgare subsp. vulgare] 70 3e-10
gb|EXB99118.1| hypothetical protein L484_007026 [Morus notabilis] 70 4e-10
ref|XP_004235463.1| PREDICTED: pentatricopeptide repeat-containi... 69 5e-10
ref|XP_006344596.1| PREDICTED: pentatricopeptide repeat-containi... 69 7e-10
ref|XP_006847845.1| hypothetical protein AMTR_s00029p00062590 [A... 69 7e-10
>gb|EMJ18360.1| hypothetical protein PRUPE_ppa001868mg [Prunus persica]
Length = 751
Score = 86.7 bits (213), Expect = 3e-15
Identities = 42/70 (60%), Positives = 55/70 (78%)
Frame = +2
Query: 245 TVASGLLSCAHLGYLALGKCIHGYIIRNYVQLDLVATTALIDMYSKCNSLSLAKEIFDRM 424
T+++G+LSCAHL YL GK IHGYIIR VQLDLVA+TAL+D+YSK N L A+ +F++M
Sbjct: 304 TLSNGILSCAHLNYLQQGKSIHGYIIRVGVQLDLVASTALVDLYSKSNKLIQARYLFEKM 363
Query: 425 DNKDTGSSNV 454
+ KD S +V
Sbjct: 364 EEKDAISYDV 373
>ref|XP_004293160.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Fragaria vesca subsp. vesca]
Length = 819
Score = 84.0 bits (206), Expect = 2e-14
Identities = 39/64 (60%), Positives = 51/64 (79%)
Frame = +2
Query: 245 TVASGLLSCAHLGYLALGKCIHGYIIRNYVQLDLVATTALIDMYSKCNSLSLAKEIFDRM 424
T ++G+LSCAHL YL GK IHG+IIR V+LD+VATT+L+D+YSKC L A+ +FDRM
Sbjct: 313 TFSNGILSCAHLSYLPEGKSIHGHIIRVGVKLDVVATTSLVDLYSKCYKLIQARTLFDRM 372
Query: 425 DNKD 436
+ KD
Sbjct: 373 EKKD 376
>gb|EOY03567.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao]
Length = 790
Score = 83.6 bits (205), Expect = 3e-14
Identities = 41/70 (58%), Positives = 54/70 (77%)
Frame = +2
Query: 245 TVASGLLSCAHLGYLALGKCIHGYIIRNYVQLDLVATTALIDMYSKCNSLSLAKEIFDRM 424
++++G+L CA L YL GK IHG+IIR QLDLVATTAL+DMYSKCN+L A+++FD M
Sbjct: 341 SLSNGILCCADLKYLREGKSIHGHIIRIGYQLDLVATTALVDMYSKCNNLIQARKLFDVM 400
Query: 425 DNKDTGSSNV 454
+ +D S NV
Sbjct: 401 ETRDVVSYNV 410
>ref|XP_006848707.1| hypothetical protein AMTR_s00177p00030400 [Amborella trichopoda]
gi|548852118|gb|ERN10288.1| hypothetical protein
AMTR_s00177p00030400 [Amborella trichopoda]
Length = 600
Score = 77.8 bits (190), Expect = 1e-12
Identities = 38/70 (54%), Positives = 48/70 (68%)
Frame = +2
Query: 245 TVASGLLSCAHLGYLALGKCIHGYIIRNYVQLDLVATTALIDMYSKCNSLSLAKEIFDRM 424
++A+ LL CA L L+LG IHGYIIR + LDL+A TALI+MY KC + AKE+FD +
Sbjct: 154 SLANALLGCADLMCLSLGASIHGYIIRREIDLDLIAATALIEMYGKCRKIEKAKEVFDTV 213
Query: 425 DNKDTGSSNV 454
KD S NV
Sbjct: 214 KFKDVVSCNV 223
>gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 76.3 bits (186), Expect = 4e-12
Identities = 36/69 (52%), Positives = 51/69 (73%)
Frame = +2
Query: 245 TVASGLLSCAHLGYLALGKCIHGYIIRNYVQLDLVATTALIDMYSKCNSLSLAKEIFDRM 424
T++S L +CAHLG L+LGK +H I + ++L++ TALIDMY+KC S++ A+ IFDRM
Sbjct: 416 TISSTLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRM 475
Query: 425 DNKDTGSSN 451
DNK+ S N
Sbjct: 476 DNKNVVSWN 484
Score = 57.4 bits (137), Expect = 2e-06
Identities = 26/69 (37%), Positives = 42/69 (60%)
Frame = +2
Query: 245 TVASGLLSCAHLGYLALGKCIHGYIIRNYVQLDLVATTALIDMYSKCNSLSLAKEIFDRM 424
T+AS L + A ++A+G+C+HGY ++ + T L+ +YSKC + A+ +FDRM
Sbjct: 214 TLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRM 273
Query: 425 DNKDTGSSN 451
DN D + N
Sbjct: 274 DNPDLVAYN 282
>ref|XP_002301797.2| pentatricopeptide repeat-containing family protein, partial
[Populus trichocarpa] gi|550345752|gb|EEE81070.2|
pentatricopeptide repeat-containing family protein,
partial [Populus trichocarpa]
Length = 599
Score = 74.3 bits (181), Expect = 2e-11
Identities = 36/63 (57%), Positives = 48/63 (76%)
Frame = +2
Query: 248 VASGLLSCAHLGYLALGKCIHGYIIRNYVQLDLVATTALIDMYSKCNSLSLAKEIFDRMD 427
+ S LL+C+ +G+L LGK IHGYI+R + +LV TALIDMY+KC SLS A IFDR+D
Sbjct: 312 LVSALLACSQVGHLKLGKSIHGYIVRR-LGFELVLGTALIDMYAKCGSLSCAHAIFDRVD 370
Query: 428 NKD 436
++D
Sbjct: 371 SRD 373
>ref|XP_004953844.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Setaria italica]
Length = 642
Score = 74.3 bits (181), Expect = 2e-11
Identities = 31/69 (44%), Positives = 48/69 (69%)
Frame = +2
Query: 230 TIQGKTVASGLLSCAHLGYLALGKCIHGYIIRNYVQLDLVATTALIDMYSKCNSLSLAKE 409
TI T+ SG+ +CAHLG + G+ HGY+IR + D++ TAL+DMY KC ++ +A+
Sbjct: 355 TIDRFTLGSGVAACAHLGDIYSGRAFHGYLIRRALDTDVIRGTALVDMYGKCGNMGVARL 414
Query: 410 IFDRMDNKD 436
+FDRMD ++
Sbjct: 415 VFDRMDERN 423
>ref|XP_004964651.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Setaria italica]
Length = 788
Score = 73.6 bits (179), Expect = 3e-11
Identities = 35/69 (50%), Positives = 50/69 (72%)
Frame = +2
Query: 245 TVASGLLSCAHLGYLALGKCIHGYIIRNYVQLDLVATTALIDMYSKCNSLSLAKEIFDRM 424
T++S L +CA LG L+LGK +H I + ++L++ TALIDMY+KC S++ A+ IFDRM
Sbjct: 417 TISSTLSACAQLGALSLGKWVHKIIAKENLELNVYVMTALIDMYAKCGSIAEARSIFDRM 476
Query: 425 DNKDTGSSN 451
DNK+ S N
Sbjct: 477 DNKNVVSWN 485
>ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 73.2 bits (178), Expect = 3e-11
Identities = 34/69 (49%), Positives = 52/69 (75%)
Frame = +2
Query: 245 TVASGLLSCAHLGYLALGKCIHGYIIRNYVQLDLVATTALIDMYSKCNSLSLAKEIFDRM 424
++ S LL+C+ +G+L LGK +HGYI+R + D V++TA+IDMYSKC SLS A+ +FD++
Sbjct: 309 SLVSVLLACSQVGFLKLGKSVHGYIVRR-LHFDCVSSTAVIDMYSKCGSLSFARTVFDQI 367
Query: 425 DNKDTGSSN 451
+D+ S N
Sbjct: 368 SFRDSISWN 376
>ref|XP_002454322.1| hypothetical protein SORBIDRAFT_04g028670 [Sorghum bicolor]
gi|241934153|gb|EES07298.1| hypothetical protein
SORBIDRAFT_04g028670 [Sorghum bicolor]
Length = 637
Score = 71.6 bits (174), Expect = 1e-10
Identities = 31/69 (44%), Positives = 47/69 (68%)
Frame = +2
Query: 230 TIQGKTVASGLLSCAHLGYLALGKCIHGYIIRNYVQLDLVATTALIDMYSKCNSLSLAKE 409
TI T+ SG+ +CAHL + G+ HGY+IR + +++ TAL+DMYSKC + LA+
Sbjct: 350 TIDRFTLGSGVAACAHLADIDSGRAFHGYLIRRALDTEVIQGTALLDMYSKCGYMDLARL 409
Query: 410 IFDRMDNKD 436
+FDRMD ++
Sbjct: 410 VFDRMDERN 418
>ref|XP_002437979.1| hypothetical protein SORBIDRAFT_10g005810 [Sorghum bicolor]
gi|241916202|gb|EER89346.1| hypothetical protein
SORBIDRAFT_10g005810 [Sorghum bicolor]
Length = 657
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/69 (49%), Positives = 49/69 (71%)
Frame = +2
Query: 245 TVASGLLSCAHLGYLALGKCIHGYIIRNYVQLDLVATTALIDMYSKCNSLSLAKEIFDRM 424
T++S L +CA LG L+LG +H I + ++L++ TALIDMY+KC S++ A+ IFDRM
Sbjct: 416 TISSTLSACAQLGALSLGTWVHRIIAKENLELNVYVMTALIDMYAKCGSIAEARSIFDRM 475
Query: 425 DNKDTGSSN 451
DNK+ S N
Sbjct: 476 DNKNVVSWN 484
Score = 55.5 bits (132), Expect = 7e-06
Identities = 24/69 (34%), Positives = 42/69 (60%)
Frame = +2
Query: 245 TVASGLLSCAHLGYLALGKCIHGYIIRNYVQLDLVATTALIDMYSKCNSLSLAKEIFDRM 424
T+AS L + A ++A+G+C+HGY ++ + T L+ +YSKC + A+ +FDRM
Sbjct: 214 TLASSLRAAAEASHVAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDCARSLFDRM 273
Query: 425 DNKDTGSSN 451
++ D + N
Sbjct: 274 EDPDLVAYN 282
>gb|ABR16216.1| unknown [Picea sitchensis]
Length = 394
Score = 70.5 bits (171), Expect = 2e-10
Identities = 39/82 (47%), Positives = 50/82 (60%)
Frame = +2
Query: 245 TVASGLLSCAHLGYLALGKCIHGYIIRNYVQLDLVATTALIDMYSKCNSLSLAKEIFDRM 424
TVAS L +CA L L GK IHGYIIR + L +V ALIDMY+KC S+ A+++FD+M
Sbjct: 216 TVASVLPACAQLSDLQQGKEIHGYIIRRGLDLGIVVGNALIDMYAKCGSIGSAQKVFDKM 275
Query: 425 DNKDTGSSNVRGIPEDDKNRFE 490
+D S NV RF+
Sbjct: 276 LQRDVVSWNVAIAGYAQNGRFD 297
>ref|XP_006479255.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Citrus sinensis]
Length = 596
Score = 70.1 bits (170), Expect = 3e-10
Identities = 34/70 (48%), Positives = 49/70 (70%)
Frame = +2
Query: 245 TVASGLLSCAHLGYLALGKCIHGYIIRNYVQLDLVATTALIDMYSKCNSLSLAKEIFDRM 424
++ S LL+CA +G+L LGK IHGY +R + +LV T++IDMYSKC S A+ +FD+M
Sbjct: 309 SLVSALLACAQIGFLKLGKSIHGYTVRRF-DFNLVLGTSVIDMYSKCGVPSCARALFDQM 367
Query: 425 DNKDTGSSNV 454
++D S NV
Sbjct: 368 QSRDLISWNV 377
>ref|XP_006443577.1| hypothetical protein CICLE_v10019402mg [Citrus clementina]
gi|557545839|gb|ESR56817.1| hypothetical protein
CICLE_v10019402mg [Citrus clementina]
Length = 596
Score = 70.1 bits (170), Expect = 3e-10
Identities = 34/70 (48%), Positives = 49/70 (70%)
Frame = +2
Query: 245 TVASGLLSCAHLGYLALGKCIHGYIIRNYVQLDLVATTALIDMYSKCNSLSLAKEIFDRM 424
++ S LL+CA +G+L LGK IHGY +R + +LV T++IDMYSKC S A+ +FD+M
Sbjct: 309 SLVSALLACAQIGFLKLGKSIHGYTVRRF-DFNLVLGTSVIDMYSKCGVPSCARALFDQM 367
Query: 425 DNKDTGSSNV 454
++D S NV
Sbjct: 368 QSRDLISWNV 377
>ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 70.1 bits (170), Expect = 3e-10
Identities = 35/70 (50%), Positives = 48/70 (68%)
Frame = +2
Query: 245 TVASGLLSCAHLGYLALGKCIHGYIIRNYVQLDLVATTALIDMYSKCNSLSLAKEIFDRM 424
T++S L +CA LG L+LGK +H I ++L++ TALIDMY KC S++ A+ IFD M
Sbjct: 425 TISSALSACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSM 484
Query: 425 DNKDTGSSNV 454
DNK+ S NV
Sbjct: 485 DNKNVVSWNV 494
>dbj|BAK05894.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 70.1 bits (170), Expect = 3e-10
Identities = 36/69 (52%), Positives = 50/69 (72%)
Frame = +2
Query: 248 VASGLLSCAHLGYLALGKCIHGYIIRNYVQLDLVATTALIDMYSKCNSLSLAKEIFDRMD 427
V LL+C+ LG L LGK IHG+I+R ++LD + TA+IDMYSKC SLS A+ +FD++
Sbjct: 308 VVGALLACSDLGLLKLGKSIHGFILRT-LELDRMVGTAVIDMYSKCGSLSSAQMLFDKVV 366
Query: 428 NKDTGSSNV 454
++D S NV
Sbjct: 367 SRDLISWNV 375
>gb|EXB99118.1| hypothetical protein L484_007026 [Morus notabilis]
Length = 592
Score = 69.7 bits (169), Expect = 4e-10
Identities = 34/64 (53%), Positives = 46/64 (71%)
Frame = +2
Query: 245 TVASGLLSCAHLGYLALGKCIHGYIIRNYVQLDLVATTALIDMYSKCNSLSLAKEIFDRM 424
++ S LL+C+ LG L LGK IHGYI + + +D V+ TA+IDMYSKC SLS A+ +FDR
Sbjct: 303 SLLSALLACSQLGLLKLGKSIHGYIAKRH-DIDQVSGTAVIDMYSKCGSLSCAQALFDRT 361
Query: 425 DNKD 436
+D
Sbjct: 362 KTRD 365
>ref|XP_004235463.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Solanum lycopersicum]
Length = 528
Score = 69.3 bits (168), Expect = 5e-10
Identities = 32/59 (54%), Positives = 39/59 (66%)
Frame = +2
Query: 245 TVASGLLSCAHLGYLALGKCIHGYIIRNYVQLDLVATTALIDMYSKCNSLSLAKEIFDR 421
T A L +C H G L LGKCIHGYI RN + L+ + ALIDMY KC SL A+ +FD+
Sbjct: 250 TFACVLAACGHTGMLQLGKCIHGYIYRNNLHLNSLTVNALIDMYGKCGSLKDARNLFDK 308
>ref|XP_006344596.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Solanum tuberosum]
Length = 528
Score = 68.9 bits (167), Expect = 7e-10
Identities = 32/59 (54%), Positives = 39/59 (66%)
Frame = +2
Query: 245 TVASGLLSCAHLGYLALGKCIHGYIIRNYVQLDLVATTALIDMYSKCNSLSLAKEIFDR 421
T A L +C H G L LGKCIHGYI RN + L+ + ALIDMY KC SL A+ +FD+
Sbjct: 250 TFACVLAACGHTGMLQLGKCIHGYIYRNNLHLNSLTLNALIDMYGKCGSLKDARNLFDK 308
>ref|XP_006847845.1| hypothetical protein AMTR_s00029p00062590 [Amborella trichopoda]
gi|548851150|gb|ERN09426.1| hypothetical protein
AMTR_s00029p00062590 [Amborella trichopoda]
Length = 625
Score = 68.9 bits (167), Expect = 7e-10
Identities = 32/64 (50%), Positives = 43/64 (67%)
Frame = +2
Query: 245 TVASGLLSCAHLGYLALGKCIHGYIIRNYVQLDLVATTALIDMYSKCNSLSLAKEIFDRM 424
T+ + L SCA L L GK IHG+ ++N++ D + ALIDMYSKC SL LA+ +FDRM
Sbjct: 350 TLVNLLPSCAKLSALLHGKEIHGFSVKNHIHWDTIVCNALIDMYSKCGSLELARRVFDRM 409
Query: 425 DNKD 436
+D
Sbjct: 410 PERD 413