BLASTX nr result

ID: Catharanthus23_contig00018639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00018639
         (635 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004231295.1| PREDICTED: putative high mobility group B pr...    60   7e-07

>ref|XP_004231295.1| PREDICTED: putative high mobility group B protein 11-like [Solanum
           lycopersicum]
          Length = 382

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 31/88 (35%), Positives = 49/88 (55%)
 Frame = +2

Query: 20  DKERFKKEMVIYGQICSQMTAKTQEISSNLAPSIIKFGPSSPVDNGCYVTLEASHSENFF 199
           DKER+ +EM  Y Q  ++ T     + S L PS+I FG  S +D   +VT +     N  
Sbjct: 295 DKERYIREMAAYEQHKNKETTTNPNLLSGLTPSMINFGAPSVID---HVTSQGDTGSN-I 350

Query: 200 VPDETLVESTIQMLKNSRPNDPMFHINW 283
           +PD +  EST+Q   + + ++P+F +NW
Sbjct: 351 IPDASFTESTVQRPNSGKTSNPIFQMNW 378


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