BLASTX nr result

ID: Catharanthus23_contig00018630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00018630
         (414 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554126.1| PREDICTED: uncharacterized protein LOC100808...    62   1e-07
ref|XP_006576783.1| PREDICTED: sigma factor binding protein 1, c...    59   7e-07
gb|ESW34088.1| hypothetical protein PHAVU_001G123400g [Phaseolus...    57   3e-06
gb|AFK35294.1| unknown [Medicago truncatula]                           55   7e-06
ref|XP_003598460.1| Sigma factor binding protein [Medicago trunc...    55   7e-06

>ref|XP_003554126.1| PREDICTED: uncharacterized protein LOC100808231 [Glycine max]
          Length = 168

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 32/56 (57%), Positives = 42/56 (75%), Gaps = 6/56 (10%)
 Frame = +3

Query: 207 YISNPMKVNTSASEFRALVQELTGQDSDNIPD------HDPTNKFSHIQSVGQEEE 356
           YISNPMK+ TSASEFRALVQELTGQD+++ PD      H P +  S ++++ +EEE
Sbjct: 36  YISNPMKIKTSASEFRALVQELTGQDAESPPDPSRFHGHHPDSS-SSVENIEEEEE 90


>ref|XP_006576783.1| PREDICTED: sigma factor binding protein 1, chloroplastic-like
           [Glycine max]
          Length = 167

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 33/66 (50%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
 Frame = +3

Query: 207 YISNPMKVNTSASEFRALVQELTGQDSDNIPDHDPTNKFSH---IQSVGQEEEMKKGMEV 377
           YISNPMK+ TSASEFRALVQELTGQD+++ PD    +   H     SV   EE +  +  
Sbjct: 36  YISNPMKIKTSASEFRALVQELTGQDAESPPDPTRFHGLIHPDSSSSVDHIEEEEDNVHS 95

Query: 378 ISRTVP 395
           ++  VP
Sbjct: 96  VNCVVP 101


>gb|ESW34088.1| hypothetical protein PHAVU_001G123400g [Phaseolus vulgaris]
          Length = 149

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/69 (47%), Positives = 40/69 (57%)
 Frame = +3

Query: 207 YISNPMKVNTSASEFRALVQELTGQDSDNIPDHDPTNKFSHIQSVGQEEEMKKGMEVISR 386
           YISNPMK+ TSASEFRALVQELTGQD+ + P  +PT    H      +    K + V   
Sbjct: 34  YISNPMKIKTSASEFRALVQELTGQDAQSPP--NPTR--FHALDSSDDSSSDKVISVDDH 89

Query: 387 TVPADDDDD 413
            +P   D D
Sbjct: 90  VIPIPMDPD 98


>gb|AFK35294.1| unknown [Medicago truncatula]
          Length = 135

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/50 (56%), Positives = 34/50 (68%)
 Frame = +3

Query: 207 YISNPMKVNTSASEFRALVQELTGQDSDNIPDHDPTNKFSHIQSVGQEEE 356
           YIS+PMKV TSAS FRALVQELTGQDS+        N F H+  V  +++
Sbjct: 33  YISSPMKVKTSASNFRALVQELTGQDSNVADMFVEVNDFVHVDDVQNQQK 82


>ref|XP_003598460.1| Sigma factor binding protein [Medicago truncatula]
           gi|355487508|gb|AES68711.1| Sigma factor binding protein
           [Medicago truncatula]
          Length = 128

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/50 (56%), Positives = 34/50 (68%)
 Frame = +3

Query: 207 YISNPMKVNTSASEFRALVQELTGQDSDNIPDHDPTNKFSHIQSVGQEEE 356
           YIS+PMKV TSAS FRALVQELTGQDS+        N F H+  V  +++
Sbjct: 26  YISSPMKVKTSASNFRALVQELTGQDSNVADMFVEVNDFVHVDDVQNQQK 75


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