BLASTX nr result
ID: Catharanthus23_contig00018526
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00018526
(1265 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004247885.1| PREDICTED: pentatricopeptide repeat-containi... 345 2e-92
ref|XP_002276778.1| PREDICTED: pentatricopeptide repeat-containi... 345 2e-92
ref|XP_006360926.1| PREDICTED: pentatricopeptide repeat-containi... 343 9e-92
ref|XP_002281924.1| PREDICTED: pentatricopeptide repeat-containi... 342 2e-91
ref|XP_002517255.1| conserved hypothetical protein [Ricinus comm... 337 5e-90
ref|XP_002875809.1| pentatricopeptide repeat-containing protein ... 333 7e-89
gb|EOY33905.1| Pentatricopeptide repeat superfamily protein [The... 333 9e-89
gb|EMJ06956.1| hypothetical protein PRUPE_ppa010266mg [Prunus pe... 333 1e-88
ref|XP_006404445.1| hypothetical protein EUTSA_v10010650mg [Eutr... 332 2e-88
ref|XP_004291520.1| PREDICTED: pentatricopeptide repeat-containi... 330 6e-88
ref|XP_002314145.2| pentatricopeptide repeat-containing family p... 330 8e-88
ref|NP_190271.1| pentatricopeptide repeat-containing protein [Ar... 330 8e-88
ref|XP_006291711.1| hypothetical protein CARUB_v10017876mg [Caps... 328 2e-87
ref|XP_003537970.1| PREDICTED: pentatricopeptide repeat-containi... 326 1e-86
ref|XP_006858620.1| hypothetical protein AMTR_s00066p00023060 [A... 326 1e-86
dbj|BAK03258.1| predicted protein [Hordeum vulgare subsp. vulgare] 325 2e-86
ref|XP_006591821.1| PREDICTED: uncharacterized protein LOC100306... 325 3e-86
ref|XP_004145279.1| PREDICTED: pentatricopeptide repeat-containi... 325 3e-86
ref|XP_004507153.1| PREDICTED: pentatricopeptide repeat-containi... 323 1e-85
gb|ESW04024.1| hypothetical protein PHAVU_011G060800g [Phaseolus... 322 3e-85
>ref|XP_004247885.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g46870-like [Solanum lycopersicum]
Length = 256
Score = 345 bits (886), Expect = 2e-92
Identities = 175/254 (68%), Positives = 199/254 (78%), Gaps = 1/254 (0%)
Frame = +3
Query: 117 ISRARINSTPIFHILPRLSYISHPFTRKQMSFSLLSPPPWY-NYARFGVLRVQAYHDGRP 293
ISR +I S +L LS P ++ S P W ++R V V+ YHDGRP
Sbjct: 6 ISRLKIPSL----LLKHLSVSPLPSISSTLTSSSSCSPSWVPEFSRSSVRDVRWYHDGRP 61
Query: 294 RGPLWRGKKMIGKEALYVIMGLKRFKDDEEKLQKFIKTHVFRLLKLDMIAVLNELERQQE 473
RG LWRGKK+IGKEAL+VI+GL+RFKDDEEKL KF+KTHV RLLK+DMIAVLNELERQ+E
Sbjct: 62 RGSLWRGKKLIGKEALFVILGLRRFKDDEEKLDKFVKTHVLRLLKMDMIAVLNELERQEE 121
Query: 474 VSLAVKMFKVMQKQEWYKPDVYLYKDLIISLARSKKMDQTMELWEMMKKEDLFPDSQTYT 653
VSLAVK+F V+QKQ WY+PDVYLYKDLII+LAR +KMD M+LWE M+KEDLFPD QT+T
Sbjct: 122 VSLAVKVFWVIQKQAWYQPDVYLYKDLIIALARRRKMDDAMKLWESMRKEDLFPDCQTFT 181
Query: 654 EVIRGFLRDGSPGDAMNIYEDMKKSPDPPEELPFRIXXXXXXXXXXXRNRVKQDFEEIFP 833
EVIRGFLRDGSP DAMNI+EDMKKSP PPEELPFR+ RNRVKQDFEEIFP
Sbjct: 182 EVIRGFLRDGSPADAMNIFEDMKKSPYPPEELPFRVLLKGLLPHPLLRNRVKQDFEEIFP 241
Query: 834 DRHIYDPPEEIFGL 875
DRHIYDPPEEIFGL
Sbjct: 242 DRHIYDPPEEIFGL 255
>ref|XP_002276778.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46870
[Vitis vinifera] gi|297745785|emb|CBI15841.3| unnamed
protein product [Vitis vinifera]
Length = 252
Score = 345 bits (886), Expect = 2e-92
Identities = 170/239 (71%), Positives = 193/239 (80%), Gaps = 9/239 (3%)
Frame = +3
Query: 189 FTRKQMSFSLLSPPPWYNYARFGVLRVQA---------YHDGRPRGPLWRGKKMIGKEAL 341
F+ K + + SP +F VL V + YHDGRPRGPLWRGKK+IGKEAL
Sbjct: 14 FSAKILQSLIKSPIKESTKFQFPVLEVASNKPLFGLKHYHDGRPRGPLWRGKKLIGKEAL 73
Query: 342 YVIMGLKRFKDDEEKLQKFIKTHVFRLLKLDMIAVLNELERQQEVSLAVKMFKVMQKQEW 521
+VI+GLKRFKDDEEKL+KFIK+HV RLLK+DMIAVL ELERQ+EV+LAV++F+V QKQ+W
Sbjct: 74 FVILGLKRFKDDEEKLRKFIKSHVLRLLKMDMIAVLTELERQEEVTLAVEVFRVFQKQDW 133
Query: 522 YKPDVYLYKDLIISLARSKKMDQTMELWEMMKKEDLFPDSQTYTEVIRGFLRDGSPGDAM 701
YKPDVYLYKDLII+LA+ KKMD M+LWE M+KEDLFPD QTYTEVIRGFLR GSP DAM
Sbjct: 134 YKPDVYLYKDLIIALAKCKKMDNAMQLWESMRKEDLFPDYQTYTEVIRGFLRHGSPADAM 193
Query: 702 NIYEDMKKSPDPPEELPFRIXXXXXXXXXXXRNRVKQDFEEIFPDRHIYDPPEEIFGLH 878
NIYEDMKKSPDPPEELPFRI RNRVKQDFEEIFPDRH+YDPPEEIFG+H
Sbjct: 194 NIYEDMKKSPDPPEELPFRILLKGLLPHPLLRNRVKQDFEEIFPDRHVYDPPEEIFGIH 252
>ref|XP_006360926.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g46870-like [Solanum tuberosum]
Length = 256
Score = 343 bits (880), Expect = 9e-92
Identities = 174/254 (68%), Positives = 198/254 (77%), Gaps = 1/254 (0%)
Frame = +3
Query: 117 ISRARINSTPIFHILPRLSYISHPFTRKQMSFSLLSPPPWY-NYARFGVLRVQAYHDGRP 293
ISR +I S +L LS P ++ S W +R V V+ YHDGRP
Sbjct: 6 ISRLKIPSL----LLKHLSVSPLPSVSSTLTSSSSCSTSWVPELSRSSVRDVRWYHDGRP 61
Query: 294 RGPLWRGKKMIGKEALYVIMGLKRFKDDEEKLQKFIKTHVFRLLKLDMIAVLNELERQQE 473
RGPLWRGKK+IGKEAL+VI+GL+RF+DDEEKL KF+KTHV RLLK+DMIAVLNELERQ+E
Sbjct: 62 RGPLWRGKKLIGKEALFVILGLRRFRDDEEKLDKFVKTHVLRLLKMDMIAVLNELERQEE 121
Query: 474 VSLAVKMFKVMQKQEWYKPDVYLYKDLIISLARSKKMDQTMELWEMMKKEDLFPDSQTYT 653
VSLAVK+F V+QKQ WY+PDVYLYKDLII+LAR +KMD M+LWE M+KEDLFPD QT+T
Sbjct: 122 VSLAVKVFWVIQKQAWYQPDVYLYKDLIIALARRRKMDDAMKLWESMRKEDLFPDCQTFT 181
Query: 654 EVIRGFLRDGSPGDAMNIYEDMKKSPDPPEELPFRIXXXXXXXXXXXRNRVKQDFEEIFP 833
EVIRGFLRDGSP DAMNI+EDMKKSP PPEELPFR+ RNRVKQDFEEIFP
Sbjct: 182 EVIRGFLRDGSPADAMNIFEDMKKSPYPPEELPFRVLLKGLLPHPLLRNRVKQDFEEIFP 241
Query: 834 DRHIYDPPEEIFGL 875
DRHIYDPPEEIFGL
Sbjct: 242 DRHIYDPPEEIFGL 255
>ref|XP_002281924.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46870
isoform 1 [Vitis vinifera]
gi|359478900|ref|XP_003632183.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g46870
isoform 2 [Vitis vinifera] gi|297745987|emb|CBI16043.3|
unnamed protein product [Vitis vinifera]
Length = 252
Score = 342 bits (877), Expect = 2e-91
Identities = 161/207 (77%), Positives = 183/207 (88%)
Frame = +3
Query: 258 VLRVQAYHDGRPRGPLWRGKKMIGKEALYVIMGLKRFKDDEEKLQKFIKTHVFRLLKLDM 437
+L + YHDGRPRGPLWRGKK+IGKEAL+VI+GLKRFKDDEE L+KFIK+HV RLLK+DM
Sbjct: 46 LLGSKLYHDGRPRGPLWRGKKLIGKEALFVILGLKRFKDDEENLRKFIKSHVLRLLKMDM 105
Query: 438 IAVLNELERQQEVSLAVKMFKVMQKQEWYKPDVYLYKDLIISLARSKKMDQTMELWEMMK 617
+AVL ELERQ+EVSLAV++F+V++KQ+WYKPDVYLYKDLII+LA+ KKMD M+LWE M+
Sbjct: 106 VAVLTELERQEEVSLAVEVFRVIRKQDWYKPDVYLYKDLIIALAKCKKMDDAMQLWESMR 165
Query: 618 KEDLFPDSQTYTEVIRGFLRDGSPGDAMNIYEDMKKSPDPPEELPFRIXXXXXXXXXXXR 797
KEDLFPD QTYTEVIRGFLR GSP DAMNIYEDMKKSPDPPEELPFRI R
Sbjct: 166 KEDLFPDYQTYTEVIRGFLRYGSPADAMNIYEDMKKSPDPPEELPFRILLKGLLPHPLLR 225
Query: 798 NRVKQDFEEIFPDRHIYDPPEEIFGLH 878
NRVKQDFEEIFPDRH+YDPPEEIFG+H
Sbjct: 226 NRVKQDFEEIFPDRHVYDPPEEIFGVH 252
>ref|XP_002517255.1| conserved hypothetical protein [Ricinus communis]
gi|223543626|gb|EEF45155.1| conserved hypothetical
protein [Ricinus communis]
Length = 258
Score = 337 bits (865), Expect = 5e-90
Identities = 157/213 (73%), Positives = 184/213 (86%)
Frame = +3
Query: 237 YNYARFGVLRVQAYHDGRPRGPLWRGKKMIGKEALYVIMGLKRFKDDEEKLQKFIKTHVF 416
+N++ ++ YHDGRPRGPLWRGKK+IGKEAL+VI+GLKRFKD+EEKL KFIKTHV
Sbjct: 45 HNHSHNSFSGLRQYHDGRPRGPLWRGKKLIGKEALFVILGLKRFKDEEEKLDKFIKTHVL 104
Query: 417 RLLKLDMIAVLNELERQQEVSLAVKMFKVMQKQEWYKPDVYLYKDLIISLARSKKMDQTM 596
RLLK+DMIAVL ELERQ+EVSLA K+F+++QKQ+WY PDVYLYKDLII+L RS KMDQ M
Sbjct: 105 RLLKMDMIAVLTELERQEEVSLATKVFQIIQKQDWYNPDVYLYKDLIIALTRSGKMDQAM 164
Query: 597 ELWEMMKKEDLFPDSQTYTEVIRGFLRDGSPGDAMNIYEDMKKSPDPPEELPFRIXXXXX 776
+LWE M+ E+LFPDSQ YTE+IRGFLRDGSPGDAMNIYEDMKKSPDPPEELPFRI
Sbjct: 165 KLWEAMRSENLFPDSQMYTELIRGFLRDGSPGDAMNIYEDMKKSPDPPEELPFRILLKGL 224
Query: 777 XXXXXXRNRVKQDFEEIFPDRHIYDPPEEIFGL 875
RNRVKQD+EE+FP++H+YDPPEEIFG+
Sbjct: 225 LPHPLLRNRVKQDYEELFPEKHVYDPPEEIFGV 257
>ref|XP_002875809.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297321647|gb|EFH52068.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 257
Score = 333 bits (855), Expect = 7e-89
Identities = 157/220 (71%), Positives = 186/220 (84%)
Frame = +3
Query: 213 SLLSPPPWYNYARFGVLRVQAYHDGRPRGPLWRGKKMIGKEALYVIMGLKRFKDDEEKLQ 392
+LL P P + F V +HDGRPRGPLWRGKK+IGKEAL+VI+GLKR KDD+EKLQ
Sbjct: 40 TLLHPIPPKPFTVF----VSRFHDGRPRGPLWRGKKLIGKEALFVILGLKRLKDDDEKLQ 95
Query: 393 KFIKTHVFRLLKLDMIAVLNELERQQEVSLAVKMFKVMQKQEWYKPDVYLYKDLIISLAR 572
KFIKTHVFRLLKLDM+AV+ ELERQ+E +LA+KMF+V+QKQEWY+PDV++YKDLI+SLA+
Sbjct: 96 KFIKTHVFRLLKLDMLAVIGELERQEETALAIKMFEVIQKQEWYQPDVFMYKDLIVSLAK 155
Query: 573 SKKMDQTMELWEMMKKEDLFPDSQTYTEVIRGFLRDGSPGDAMNIYEDMKKSPDPPEELP 752
SK+MD+ M LWE MKKE+LFPDSQTYTEVIRGFLRDG P DAMN+YEDM KSPDPPEELP
Sbjct: 156 SKRMDEAMALWEKMKKENLFPDSQTYTEVIRGFLRDGCPADAMNVYEDMLKSPDPPEELP 215
Query: 753 FRIXXXXXXXXXXXRNRVKQDFEEIFPDRHIYDPPEEIFG 872
FR+ RN+VK+DFEE+FP++H YDPPEEIFG
Sbjct: 216 FRVLLKGLLPHPLLRNKVKKDFEELFPEKHAYDPPEEIFG 255
>gb|EOY33905.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
Length = 287
Score = 333 bits (854), Expect = 9e-89
Identities = 154/202 (76%), Positives = 181/202 (89%)
Frame = +3
Query: 267 VQAYHDGRPRGPLWRGKKMIGKEALYVIMGLKRFKDDEEKLQKFIKTHVFRLLKLDMIAV 446
++ YHDGRPRGPLW+GKK+IGKEAL+VI+GLKRFKDD++KLQKFIKTHV RLLK+++IAV
Sbjct: 84 LKQYHDGRPRGPLWKGKKLIGKEALFVILGLKRFKDDDDKLQKFIKTHVLRLLKMELIAV 143
Query: 447 LNELERQQEVSLAVKMFKVMQKQEWYKPDVYLYKDLIISLARSKKMDQTMELWEMMKKED 626
L ELERQ+E SLAVK+F+V+QKQ+WYKPDVYLYKDLII+LAR KKMD+ M+LWE M+KE+
Sbjct: 144 LTELERQEETSLAVKVFQVIQKQDWYKPDVYLYKDLIIALARFKKMDEAMKLWEYMRKEE 203
Query: 627 LFPDSQTYTEVIRGFLRDGSPGDAMNIYEDMKKSPDPPEELPFRIXXXXXXXXXXXRNRV 806
LFPDSQTYTE+IRGFLRDGSP DAMNIYEDM KSPDPPEELPFRI RN+V
Sbjct: 204 LFPDSQTYTEIIRGFLRDGSPADAMNIYEDMIKSPDPPEELPFRILLKGLLPHPLLRNKV 263
Query: 807 KQDFEEIFPDRHIYDPPEEIFG 872
K+DFEE+FP++H YDPPEEIFG
Sbjct: 264 KKDFEELFPEKHAYDPPEEIFG 285
>gb|EMJ06956.1| hypothetical protein PRUPE_ppa010266mg [Prunus persica]
Length = 256
Score = 333 bits (853), Expect = 1e-88
Identities = 158/200 (79%), Positives = 174/200 (87%)
Frame = +3
Query: 276 YHDGRPRGPLWRGKKMIGKEALYVIMGLKRFKDDEEKLQKFIKTHVFRLLKLDMIAVLNE 455
YHDGRPRGPLWRGKK+IGKEALYVI GLKRFKDDEEKL KFIK HV RLLK+D+IAVL E
Sbjct: 55 YHDGRPRGPLWRGKKLIGKEALYVISGLKRFKDDEEKLGKFIKNHVLRLLKMDLIAVLTE 114
Query: 456 LERQQEVSLAVKMFKVMQKQEWYKPDVYLYKDLIISLARSKKMDQTMELWEMMKKEDLFP 635
LERQ+EV+LA+K+F V++KQ+WY PDVYLYKDLIISLARSKKMD M LW+ MKKEDLFP
Sbjct: 115 LERQEEVNLAIKVFNVIRKQDWYNPDVYLYKDLIISLARSKKMDDVMLLWDGMKKEDLFP 174
Query: 636 DSQTYTEVIRGFLRDGSPGDAMNIYEDMKKSPDPPEELPFRIXXXXXXXXXXXRNRVKQD 815
DSQTYTEVIRGFL GSP DAMNIYEDMK SPDPPEELPFRI RNRVKQD
Sbjct: 175 DSQTYTEVIRGFLSSGSPADAMNIYEDMKNSPDPPEELPFRILLKGLLPHPLLRNRVKQD 234
Query: 816 FEEIFPDRHIYDPPEEIFGL 875
FEE+FP++H+YDPPEEIFG+
Sbjct: 235 FEELFPEQHVYDPPEEIFGV 254
>ref|XP_006404445.1| hypothetical protein EUTSA_v10010650mg [Eutrema salsugineum]
gi|557105564|gb|ESQ45898.1| hypothetical protein
EUTSA_v10010650mg [Eutrema salsugineum]
Length = 257
Score = 332 bits (851), Expect = 2e-88
Identities = 157/237 (66%), Positives = 191/237 (80%)
Frame = +3
Query: 162 PRLSYISHPFTRKQMSFSLLSPPPWYNYARFGVLRVQAYHDGRPRGPLWRGKKMIGKEAL 341
P + IS + K + +SP P+ +A +HDGRPRGPLWRGKK+IGKEAL
Sbjct: 26 PTIHRISFSYLIKPKTLHPVSPKPFTVFAA-------QFHDGRPRGPLWRGKKLIGKEAL 78
Query: 342 YVIMGLKRFKDDEEKLQKFIKTHVFRLLKLDMIAVLNELERQQEVSLAVKMFKVMQKQEW 521
+VI+GLKR K+D+EKL KFIKTHVFRLLKLDM+AV+ ELERQ+E +LA+KMF+V+QKQEW
Sbjct: 79 FVILGLKRLKEDDEKLDKFIKTHVFRLLKLDMLAVIGELERQEETALAIKMFEVIQKQEW 138
Query: 522 YKPDVYLYKDLIISLARSKKMDQTMELWEMMKKEDLFPDSQTYTEVIRGFLRDGSPGDAM 701
Y+PDV++YKDLI+SLA+SK+MD+ M LWE MKKE+LFPDSQTYTEVIRGFLRDG P DAM
Sbjct: 139 YQPDVFMYKDLIVSLAKSKRMDEAMGLWEKMKKENLFPDSQTYTEVIRGFLRDGCPADAM 198
Query: 702 NIYEDMKKSPDPPEELPFRIXXXXXXXXXXXRNRVKQDFEEIFPDRHIYDPPEEIFG 872
N+YEDM KSPDPPEELPFR+ RN+VK+DFEE+FP++H YDPPEEIFG
Sbjct: 199 NVYEDMLKSPDPPEELPFRVLLKGLLPHPLLRNKVKKDFEELFPEKHAYDPPEEIFG 255
>ref|XP_004291520.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g46870-like [Fragaria vesca subsp. vesca]
Length = 255
Score = 330 bits (847), Expect = 6e-88
Identities = 156/199 (78%), Positives = 175/199 (87%)
Frame = +3
Query: 276 YHDGRPRGPLWRGKKMIGKEALYVIMGLKRFKDDEEKLQKFIKTHVFRLLKLDMIAVLNE 455
YHDGRPRGPLWRGKK+IGKEALYVI GLKRFKDDEE L KFIK+HV RLLKLDMIAVL E
Sbjct: 55 YHDGRPRGPLWRGKKLIGKEALYVISGLKRFKDDEETLGKFIKSHVLRLLKLDMIAVLTE 114
Query: 456 LERQQEVSLAVKMFKVMQKQEWYKPDVYLYKDLIISLARSKKMDQTMELWEMMKKEDLFP 635
LERQ+EV+LA+K+F V++KQ+WYKPDVYLYKDLIISLA+SKKMD M LW+ MKKEDLFP
Sbjct: 115 LERQEEVNLAIKVFNVIRKQDWYKPDVYLYKDLIISLAKSKKMDDVMVLWDCMKKEDLFP 174
Query: 636 DSQTYTEVIRGFLRDGSPGDAMNIYEDMKKSPDPPEELPFRIXXXXXXXXXXXRNRVKQD 815
DSQT+TEVIRGFL GSP DAMNIYEDMK+SPDPPE+LPFRI RNRVKQD
Sbjct: 175 DSQTFTEVIRGFLSTGSPADAMNIYEDMKQSPDPPEQLPFRILLKGLLPHPLLRNRVKQD 234
Query: 816 FEEIFPDRHIYDPPEEIFG 872
FEE+FP++H+YDPP+EIFG
Sbjct: 235 FEELFPEQHVYDPPQEIFG 253
>ref|XP_002314145.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550331008|gb|EEE88100.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 257
Score = 330 bits (846), Expect = 8e-88
Identities = 167/256 (65%), Positives = 203/256 (79%), Gaps = 3/256 (1%)
Frame = +3
Query: 117 ISRARI-NSTPIFHILPRLSYISHPFTRKQMSFSLLSPPPWYNYARFGV-LRVQAYHDGR 290
+SR++I N + + IL L+ + Q+ S S N F V ++ YHDGR
Sbjct: 6 LSRSKIPNFSSVIVILQNLTTKQSIIDQTQLPLSKAS-----NIQSFLVPAGLRQYHDGR 60
Query: 291 PRGPLWRGKKMIGKEALYVIMGLKRFK-DDEEKLQKFIKTHVFRLLKLDMIAVLNELERQ 467
PRGPLWRGKK+IGKEAL+VI+GLKRFK DD+EKL +FIKTHVFRLLKLDMIAVL+ELERQ
Sbjct: 61 PRGPLWRGKKLIGKEALFVILGLKRFKNDDDEKLDRFIKTHVFRLLKLDMIAVLSELERQ 120
Query: 468 QEVSLAVKMFKVMQKQEWYKPDVYLYKDLIISLARSKKMDQTMELWEMMKKEDLFPDSQT 647
+EVSLAVK+F+V+QKQ+WYKPDVYLYKDLI++L ++ KM++ M+LWE M+ EDLFPDSQ
Sbjct: 121 EEVSLAVKIFRVIQKQDWYKPDVYLYKDLIMALLKTGKMEEAMKLWEDMRNEDLFPDSQM 180
Query: 648 YTEVIRGFLRDGSPGDAMNIYEDMKKSPDPPEELPFRIXXXXXXXXXXXRNRVKQDFEEI 827
YTE IRG+LRDGSP DAMNIYEDMKKSPDPPEELPFRI RNRVKQD+EE+
Sbjct: 181 YTEAIRGYLRDGSPADAMNIYEDMKKSPDPPEELPFRILLKGLLPHPLLRNRVKQDYEEL 240
Query: 828 FPDRHIYDPPEEIFGL 875
FP++H+YDPPEEIFG+
Sbjct: 241 FPEKHVYDPPEEIFGI 256
>ref|NP_190271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75266318|sp|Q9STF9.1|PP266_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g46870 gi|545719887|pdb|4LEU|A Chain A, Crystal
Structure Of Tha8-like Protein From Arabidopsis Thaliana
gi|5541672|emb|CAB51178.1| putative protein [Arabidopsis
thaliana] gi|26450732|dbj|BAC42475.1| unknown protein
[Arabidopsis thaliana] gi|28950815|gb|AAO63331.1|
At3g46870 [Arabidopsis thaliana]
gi|332644692|gb|AEE78213.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 257
Score = 330 bits (846), Expect = 8e-88
Identities = 155/220 (70%), Positives = 185/220 (84%)
Frame = +3
Query: 213 SLLSPPPWYNYARFGVLRVQAYHDGRPRGPLWRGKKMIGKEALYVIMGLKRFKDDEEKLQ 392
+LL P P + F V +HDGRPRGPLWRGKK+IGKEAL+VI+GLKR K+D+EKL
Sbjct: 40 TLLHPIPPKPFTVF----VSRFHDGRPRGPLWRGKKLIGKEALFVILGLKRLKEDDEKLD 95
Query: 393 KFIKTHVFRLLKLDMIAVLNELERQQEVSLAVKMFKVMQKQEWYKPDVYLYKDLIISLAR 572
KFIKTHVFRLLKLDM+AV+ ELERQ+E +LA+KMF+V+QKQEWY+PDV++YKDLI+SLA+
Sbjct: 96 KFIKTHVFRLLKLDMLAVIGELERQEETALAIKMFEVIQKQEWYQPDVFMYKDLIVSLAK 155
Query: 573 SKKMDQTMELWEMMKKEDLFPDSQTYTEVIRGFLRDGSPGDAMNIYEDMKKSPDPPEELP 752
SK+MD+ M LWE MKKE+LFPDSQTYTEVIRGFLRDG P DAMN+YEDM KSPDPPEELP
Sbjct: 156 SKRMDEAMALWEKMKKENLFPDSQTYTEVIRGFLRDGCPADAMNVYEDMLKSPDPPEELP 215
Query: 753 FRIXXXXXXXXXXXRNRVKQDFEEIFPDRHIYDPPEEIFG 872
FR+ RN+VK+DFEE+FP++H YDPPEEIFG
Sbjct: 216 FRVLLKGLLPHPLLRNKVKKDFEELFPEKHAYDPPEEIFG 255
>ref|XP_006291711.1| hypothetical protein CARUB_v10017876mg [Capsella rubella]
gi|565467664|ref|XP_006291712.1| hypothetical protein
CARUB_v10017876mg [Capsella rubella]
gi|482560418|gb|EOA24609.1| hypothetical protein
CARUB_v10017876mg [Capsella rubella]
gi|482560419|gb|EOA24610.1| hypothetical protein
CARUB_v10017876mg [Capsella rubella]
Length = 257
Score = 328 bits (842), Expect = 2e-87
Identities = 150/202 (74%), Positives = 178/202 (88%)
Frame = +3
Query: 267 VQAYHDGRPRGPLWRGKKMIGKEALYVIMGLKRFKDDEEKLQKFIKTHVFRLLKLDMIAV 446
V +HDGRPRGPLWRGKK+IGKEAL+VI+GLKR K+D+EKLQKFIKTHV RLLKLDM+AV
Sbjct: 54 VSRFHDGRPRGPLWRGKKLIGKEALFVILGLKRLKEDDEKLQKFIKTHVLRLLKLDMLAV 113
Query: 447 LNELERQQEVSLAVKMFKVMQKQEWYKPDVYLYKDLIISLARSKKMDQTMELWEMMKKED 626
+ ELERQ+E +LA+KMF+V+QKQEWY+PDV++YKDLI+SLA+SK+MD+ M LWE MKKE+
Sbjct: 114 IGELERQEETALAIKMFEVIQKQEWYQPDVFMYKDLIVSLAKSKRMDEAMGLWEKMKKEN 173
Query: 627 LFPDSQTYTEVIRGFLRDGSPGDAMNIYEDMKKSPDPPEELPFRIXXXXXXXXXXXRNRV 806
LFPDSQTYTEVIRGFLRDG P DAMN+YEDM KSPDPPEELPFR+ RN+V
Sbjct: 174 LFPDSQTYTEVIRGFLRDGCPADAMNVYEDMLKSPDPPEELPFRVLLKGLLPHPLLRNKV 233
Query: 807 KQDFEEIFPDRHIYDPPEEIFG 872
K+DFEE+FP++H YDPPEEIFG
Sbjct: 234 KKDFEELFPEKHAYDPPEEIFG 255
>ref|XP_003537970.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g46870-like [Glycine max]
Length = 255
Score = 326 bits (836), Expect = 1e-86
Identities = 154/199 (77%), Positives = 172/199 (86%)
Frame = +3
Query: 276 YHDGRPRGPLWRGKKMIGKEALYVIMGLKRFKDDEEKLQKFIKTHVFRLLKLDMIAVLNE 455
YHDGRPRGPLW+GKK+IGKEAL+VI G KRF DDE+KL KFIKTHV RLLK+DMIAVL E
Sbjct: 55 YHDGRPRGPLWKGKKLIGKEALFVISGFKRFNDDEDKLHKFIKTHVLRLLKMDMIAVLTE 114
Query: 456 LERQQEVSLAVKMFKVMQKQEWYKPDVYLYKDLIISLARSKKMDQTMELWEMMKKEDLFP 635
LERQ++VSLA+ MFKVMQKQ+WYKPD YLYKDLII+LAR+KKMD+ ++LWE M+KE+LFP
Sbjct: 115 LERQEQVSLALMMFKVMQKQDWYKPDAYLYKDLIIALARAKKMDEVLQLWESMRKENLFP 174
Query: 636 DSQTYTEVIRGFLRDGSPGDAMNIYEDMKKSPDPPEELPFRIXXXXXXXXXXXRNRVKQD 815
DSQTYTEVIRGFL GSP DAMNIYEDMK SPDPPEELPFRI RN+VKQD
Sbjct: 175 DSQTYTEVIRGFLNYGSPADAMNIYEDMKNSPDPPEELPFRILLKGLLPHPLLRNKVKQD 234
Query: 816 FEEIFPDRHIYDPPEEIFG 872
FEEIFPD IYDPP+EIFG
Sbjct: 235 FEEIFPDSSIYDPPQEIFG 253
>ref|XP_006858620.1| hypothetical protein AMTR_s00066p00023060 [Amborella trichopoda]
gi|548862731|gb|ERN20087.1| hypothetical protein
AMTR_s00066p00023060 [Amborella trichopoda]
Length = 265
Score = 326 bits (835), Expect = 1e-86
Identities = 149/203 (73%), Positives = 178/203 (87%)
Frame = +3
Query: 267 VQAYHDGRPRGPLWRGKKMIGKEALYVIMGLKRFKDDEEKLQKFIKTHVFRLLKLDMIAV 446
++ YHDGRPRGPLWRGKK+IGKEAL++I GLKRFKDDE +L KF+K+HV RLLK+DM+AV
Sbjct: 62 MRCYHDGRPRGPLWRGKKLIGKEALFIISGLKRFKDDEGQLDKFVKSHVSRLLKMDMVAV 121
Query: 447 LNELERQQEVSLAVKMFKVMQKQEWYKPDVYLYKDLIISLARSKKMDQTMELWEMMKKED 626
L ELERQ+EV LA+K+F+V+QK+ WYKPDVYLYKDLII+LARSK+M+ M++WE M++ED
Sbjct: 122 LCELERQEEVILALKIFRVIQKENWYKPDVYLYKDLIIALARSKRMEDAMQIWECMRRED 181
Query: 627 LFPDSQTYTEVIRGFLRDGSPGDAMNIYEDMKKSPDPPEELPFRIXXXXXXXXXXXRNRV 806
LFPDSQTYTEVIRGFLR GSP DAMNIYEDMK SP+PPEELP+R+ RNR+
Sbjct: 182 LFPDSQTYTEVIRGFLRYGSPADAMNIYEDMKNSPEPPEELPYRVLLKGLLPHPLLRNRI 241
Query: 807 KQDFEEIFPDRHIYDPPEEIFGL 875
KQDFEE+FPDRH+YDPPEEIFGL
Sbjct: 242 KQDFEEMFPDRHVYDPPEEIFGL 264
>dbj|BAK03258.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 251
Score = 325 bits (833), Expect = 2e-86
Identities = 156/241 (64%), Positives = 190/241 (78%), Gaps = 2/241 (0%)
Frame = +3
Query: 162 PRLSYIS--HPFTRKQMSFSLLSPPPWYNYARFGVLRVQAYHDGRPRGPLWRGKKMIGKE 335
P++ +S H R ++ LL P P+ + R A+HDGRPRGPLWR KK+IGKE
Sbjct: 18 PKIPTLSPPHGLFRGEVPVRLLPPQPFGEWRR-------AFHDGRPRGPLWRSKKLIGKE 70
Query: 336 ALYVIMGLKRFKDDEEKLQKFIKTHVFRLLKLDMIAVLNELERQQEVSLAVKMFKVMQKQ 515
AL+ I GLKRFK DEEKL++FIK HV RLLK D +AVL ELERQ+EV L+VKMF+++QK+
Sbjct: 71 ALFAIQGLKRFKGDEEKLREFIKRHVARLLKADKLAVLGELERQEEVDLSVKMFRIIQKE 130
Query: 516 EWYKPDVYLYKDLIISLARSKKMDQTMELWEMMKKEDLFPDSQTYTEVIRGFLRDGSPGD 695
+WYKPDVY+YKDLIISLA+ KKMD+ M++W MK+E+LFPDSQTY EVIRGFLR GSP D
Sbjct: 131 DWYKPDVYMYKDLIISLAKCKKMDEAMDIWGNMKEENLFPDSQTYAEVIRGFLRYGSPSD 190
Query: 696 AMNIYEDMKKSPDPPEELPFRIXXXXXXXXXXXRNRVKQDFEEIFPDRHIYDPPEEIFGL 875
AMNIYEDMK+SPDPPEELPFR+ RNRVKQDFEE+FP+RHIYDPP++IFG+
Sbjct: 191 AMNIYEDMKRSPDPPEELPFRVLLKGLLPHPLLRNRVKQDFEELFPERHIYDPPDDIFGM 250
Query: 876 H 878
H
Sbjct: 251 H 251
>ref|XP_006591821.1| PREDICTED: uncharacterized protein LOC100306428 isoform X1 [Glycine
max]
Length = 255
Score = 325 bits (832), Expect = 3e-86
Identities = 153/199 (76%), Positives = 172/199 (86%)
Frame = +3
Query: 276 YHDGRPRGPLWRGKKMIGKEALYVIMGLKRFKDDEEKLQKFIKTHVFRLLKLDMIAVLNE 455
YHDGRPRGPLW+GKK+IGKEAL+VI G KRF DDE+KL KFIKTHV RLLK+DMIAVL E
Sbjct: 55 YHDGRPRGPLWKGKKLIGKEALFVISGFKRFNDDEDKLHKFIKTHVLRLLKMDMIAVLTE 114
Query: 456 LERQQEVSLAVKMFKVMQKQEWYKPDVYLYKDLIISLARSKKMDQTMELWEMMKKEDLFP 635
LERQ++VSLA+ MFKVMQKQ+WYKPD YLYKDLII+LAR+KKMD+ ++LWE M++E+LFP
Sbjct: 115 LERQEQVSLALMMFKVMQKQDWYKPDAYLYKDLIIALARAKKMDEVLQLWESMREENLFP 174
Query: 636 DSQTYTEVIRGFLRDGSPGDAMNIYEDMKKSPDPPEELPFRIXXXXXXXXXXXRNRVKQD 815
DSQTYTEVIRGFL GSP DAMNIYEDMK SPDPPEELPFRI RN+VKQD
Sbjct: 175 DSQTYTEVIRGFLNYGSPADAMNIYEDMKNSPDPPEELPFRILLKGLLPHPLLRNKVKQD 234
Query: 816 FEEIFPDRHIYDPPEEIFG 872
FEEIFPD IYDPP+EIFG
Sbjct: 235 FEEIFPDSSIYDPPQEIFG 253
>ref|XP_004145279.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g46870-like [Cucumis sativus]
gi|449475090|ref|XP_004154371.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g46870-like [Cucumis sativus]
gi|449508514|ref|XP_004163333.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g46870-like [Cucumis sativus]
Length = 255
Score = 325 bits (832), Expect = 3e-86
Identities = 150/200 (75%), Positives = 177/200 (88%)
Frame = +3
Query: 276 YHDGRPRGPLWRGKKMIGKEALYVIMGLKRFKDDEEKLQKFIKTHVFRLLKLDMIAVLNE 455
YHDGRPRGPLWR +K IGKEAL+VI GLKRFK+DEEK +KF+K+HV RLLKLDM+AVL E
Sbjct: 55 YHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSHVSRLLKLDMVAVLGE 114
Query: 456 LERQQEVSLAVKMFKVMQKQEWYKPDVYLYKDLIISLARSKKMDQTMELWEMMKKEDLFP 635
LERQ+EV+LAVK+F++++KQ+WYKPDVY+YKDLII+LARSKKMD M+LWE M++E+LFP
Sbjct: 115 LERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFP 174
Query: 636 DSQTYTEVIRGFLRDGSPGDAMNIYEDMKKSPDPPEELPFRIXXXXXXXXXXXRNRVKQD 815
DSQTYTEVIRGFLR GSP DAMN+YEDMKKSPDPP+ELPFRI RNRVKQD
Sbjct: 175 DSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQD 234
Query: 816 FEEIFPDRHIYDPPEEIFGL 875
FEE+FPD+H++DPPEEIF L
Sbjct: 235 FEELFPDQHVFDPPEEIFSL 254
>ref|XP_004507153.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g46870-like [Cicer arietinum]
Length = 261
Score = 323 bits (827), Expect = 1e-85
Identities = 152/199 (76%), Positives = 173/199 (86%)
Frame = +3
Query: 276 YHDGRPRGPLWRGKKMIGKEALYVIMGLKRFKDDEEKLQKFIKTHVFRLLKLDMIAVLNE 455
YHDGRPRGPLWRGKK+IGKEAL+VI GLKRFKD+E+ L KFIKTHV RLLK+D+IAVL E
Sbjct: 61 YHDGRPRGPLWRGKKLIGKEALFVISGLKRFKDEEDTLHKFIKTHVLRLLKMDLIAVLTE 120
Query: 456 LERQQEVSLAVKMFKVMQKQEWYKPDVYLYKDLIISLARSKKMDQTMELWEMMKKEDLFP 635
LERQQEVSLA+ +F VMQKQ+WYKPD++LYKDLII+LAR+K+MD ++LWE M+KE+LFP
Sbjct: 121 LERQQEVSLALMVFNVMQKQDWYKPDMFLYKDLIIALARAKRMDDVLQLWESMRKENLFP 180
Query: 636 DSQTYTEVIRGFLRDGSPGDAMNIYEDMKKSPDPPEELPFRIXXXXXXXXXXXRNRVKQD 815
DSQTYTEVIRGFL +GSP DAMNIYEDMK SPDPPEELPFRI RN+VKQD
Sbjct: 181 DSQTYTEVIRGFLSNGSPADAMNIYEDMKNSPDPPEELPFRILLKGLLPHPLLRNKVKQD 240
Query: 816 FEEIFPDRHIYDPPEEIFG 872
FEEIFPD IYDPP+EIFG
Sbjct: 241 FEEIFPDSSIYDPPQEIFG 259
>gb|ESW04024.1| hypothetical protein PHAVU_011G060800g [Phaseolus vulgaris]
Length = 254
Score = 322 bits (824), Expect = 3e-85
Identities = 150/199 (75%), Positives = 174/199 (87%)
Frame = +3
Query: 276 YHDGRPRGPLWRGKKMIGKEALYVIMGLKRFKDDEEKLQKFIKTHVFRLLKLDMIAVLNE 455
YHDGRPRGPLW+GKK+IGKEAL+V++GLKRFKDD++KLQKFIK+HV RLLK+DMIAVL E
Sbjct: 54 YHDGRPRGPLWKGKKLIGKEALFVVLGLKRFKDDQDKLQKFIKSHVLRLLKMDMIAVLTE 113
Query: 456 LERQQEVSLAVKMFKVMQKQEWYKPDVYLYKDLIISLARSKKMDQTMELWEMMKKEDLFP 635
LERQ++VSLA+ MFKVMQKQ+WYKPD YLYKDLII+LARSKKM++ LWE M+KE+LFP
Sbjct: 114 LERQEQVSLALMMFKVMQKQDWYKPDTYLYKDLIIALARSKKMEEVSYLWESMRKENLFP 173
Query: 636 DSQTYTEVIRGFLRDGSPGDAMNIYEDMKKSPDPPEELPFRIXXXXXXXXXXXRNRVKQD 815
DSQT+TEVIRGFL GSP DAM++YEDMK SPDPP+ELPFRI RN+VKQD
Sbjct: 174 DSQTFTEVIRGFLNYGSPADAMDVYEDMKNSPDPPDELPFRILLKGLLPHPLLRNKVKQD 233
Query: 816 FEEIFPDRHIYDPPEEIFG 872
FEEIFPD IYDPP+EIFG
Sbjct: 234 FEEIFPDSSIYDPPQEIFG 252