BLASTX nr result
ID: Catharanthus23_contig00018518
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus23_contig00018518 (364 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006485704.1| PREDICTED: putative ATP-dependent helicase H... 53 3e-07 ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP... 50 3e-07 emb|CBI15349.3| unnamed protein product [Vitis vinifera] 50 3e-07 ref|XP_006440816.1| hypothetical protein CICLE_v10018555mg [Citr... 52 9e-07 >ref|XP_006485704.1| PREDICTED: putative ATP-dependent helicase HRQ1-like [Citrus sinensis] Length = 1236 Score = 53.1 bits (126), Expect(2) = 3e-07 Identities = 26/61 (42%), Positives = 37/61 (60%) Frame = -2 Query: 192 GAPESHSLLRKRKREFNGEKNPEPLHDLVMDILRSTSGNVLDEQNCKKFIQVFDSVNCLS 13 G S L KRKR + +D + ++RSTS N L+ QNC+KF++V +SVNCLS Sbjct: 148 GCISSDPLETKRKRGAECDDQGGRPYDFLWSVMRSTSKNALERQNCEKFVEVLESVNCLS 207 Query: 12 N 10 + Sbjct: 208 D 208 Score = 26.6 bits (57), Expect(2) = 3e-07 Identities = 10/19 (52%), Positives = 17/19 (89%) Frame = -3 Query: 302 LSSKLAESSWSDLMQDLSS 246 +S+K A+S++SD+MQ+ SS Sbjct: 105 ISNKFADSTYSDMMQEFSS 123 >ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase HRQ1-like [Vitis vinifera] Length = 1231 Score = 50.1 bits (118), Expect(2) = 3e-07 Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 10/87 (11%) Frame = -2 Query: 246 LRNISSLENHPDV----------NIELKGAPESHSLLRKRKREFNGEKNPEPLHDLVMDI 97 L N+S+ EN + N ++ A +++L RKRK+ F+G+K DL++ + Sbjct: 103 LSNMSNNENQTNFDSGSVIEGVRNELMEEASATYTLERKRKK-FHGDKQEGSSDDLILSL 161 Query: 96 LRSTSGNVLDEQNCKKFIQVFDSVNCL 16 L+S LD+QNC+ I+V +SVNCL Sbjct: 162 LKSPCKIFLDKQNCEILIRVLESVNCL 188 Score = 29.6 bits (65), Expect(2) = 3e-07 Identities = 13/27 (48%), Positives = 19/27 (70%) Frame = -3 Query: 332 AGPSTGPSETLSSKLAESSWSDLMQDL 252 A S P+++ S A+S+WSD+MQDL Sbjct: 74 ATTSEVPNQSPVSNFADSAWSDMMQDL 100 >emb|CBI15349.3| unnamed protein product [Vitis vinifera] Length = 1188 Score = 50.1 bits (118), Expect(2) = 3e-07 Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 10/87 (11%) Frame = -2 Query: 246 LRNISSLENHPDV----------NIELKGAPESHSLLRKRKREFNGEKNPEPLHDLVMDI 97 L N+S+ EN + N ++ A +++L RKRK+ F+G+K DL++ + Sbjct: 122 LSNMSNNENQTNFDSGSVIEGVRNELMEEASATYTLERKRKK-FHGDKQEGSSDDLILSL 180 Query: 96 LRSTSGNVLDEQNCKKFIQVFDSVNCL 16 L+S LD+QNC+ I+V +SVNCL Sbjct: 181 LKSPCKIFLDKQNCEILIRVLESVNCL 207 Score = 29.6 bits (65), Expect(2) = 3e-07 Identities = 13/27 (48%), Positives = 19/27 (70%) Frame = -3 Query: 332 AGPSTGPSETLSSKLAESSWSDLMQDL 252 A S P+++ S A+S+WSD+MQDL Sbjct: 93 ATTSEVPNQSPVSNFADSAWSDMMQDL 119 >ref|XP_006440816.1| hypothetical protein CICLE_v10018555mg [Citrus clementina] gi|557543078|gb|ESR54056.1| hypothetical protein CICLE_v10018555mg [Citrus clementina] Length = 1216 Score = 51.6 bits (122), Expect(2) = 9e-07 Identities = 26/61 (42%), Positives = 36/61 (59%) Frame = -2 Query: 192 GAPESHSLLRKRKREFNGEKNPEPLHDLVMDILRSTSGNVLDEQNCKKFIQVFDSVNCLS 13 G S L KRKR +D + ++RSTS N L+ QNC+KF++V +SVNCLS Sbjct: 148 GCISSDPLETKRKRGAECNDQGGRPYDFLWSVMRSTSKNALEGQNCEKFVEVLESVNCLS 207 Query: 12 N 10 + Sbjct: 208 D 208 Score = 26.6 bits (57), Expect(2) = 9e-07 Identities = 10/19 (52%), Positives = 17/19 (89%) Frame = -3 Query: 302 LSSKLAESSWSDLMQDLSS 246 +S+K A+S++SD+MQ+ SS Sbjct: 105 ISNKFADSTYSDMMQEFSS 123