BLASTX nr result

ID: Catharanthus23_contig00018518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00018518
         (364 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006485704.1| PREDICTED: putative ATP-dependent helicase H...    53   3e-07
ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP...    50   3e-07
emb|CBI15349.3| unnamed protein product [Vitis vinifera]               50   3e-07
ref|XP_006440816.1| hypothetical protein CICLE_v10018555mg [Citr...    52   9e-07

>ref|XP_006485704.1| PREDICTED: putative ATP-dependent helicase HRQ1-like [Citrus
           sinensis]
          Length = 1236

 Score = 53.1 bits (126), Expect(2) = 3e-07
 Identities = 26/61 (42%), Positives = 37/61 (60%)
 Frame = -2

Query: 192 GAPESHSLLRKRKREFNGEKNPEPLHDLVMDILRSTSGNVLDEQNCKKFIQVFDSVNCLS 13
           G   S  L  KRKR    +      +D +  ++RSTS N L+ QNC+KF++V +SVNCLS
Sbjct: 148 GCISSDPLETKRKRGAECDDQGGRPYDFLWSVMRSTSKNALERQNCEKFVEVLESVNCLS 207

Query: 12  N 10
           +
Sbjct: 208 D 208



 Score = 26.6 bits (57), Expect(2) = 3e-07
 Identities = 10/19 (52%), Positives = 17/19 (89%)
 Frame = -3

Query: 302 LSSKLAESSWSDLMQDLSS 246
           +S+K A+S++SD+MQ+ SS
Sbjct: 105 ISNKFADSTYSDMMQEFSS 123


>ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase
           HRQ1-like [Vitis vinifera]
          Length = 1231

 Score = 50.1 bits (118), Expect(2) = 3e-07
 Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 10/87 (11%)
 Frame = -2

Query: 246 LRNISSLENHPDV----------NIELKGAPESHSLLRKRKREFNGEKNPEPLHDLVMDI 97
           L N+S+ EN  +           N  ++ A  +++L RKRK+ F+G+K      DL++ +
Sbjct: 103 LSNMSNNENQTNFDSGSVIEGVRNELMEEASATYTLERKRKK-FHGDKQEGSSDDLILSL 161

Query: 96  LRSTSGNVLDEQNCKKFIQVFDSVNCL 16
           L+S     LD+QNC+  I+V +SVNCL
Sbjct: 162 LKSPCKIFLDKQNCEILIRVLESVNCL 188



 Score = 29.6 bits (65), Expect(2) = 3e-07
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = -3

Query: 332 AGPSTGPSETLSSKLAESSWSDLMQDL 252
           A  S  P+++  S  A+S+WSD+MQDL
Sbjct: 74  ATTSEVPNQSPVSNFADSAWSDMMQDL 100


>emb|CBI15349.3| unnamed protein product [Vitis vinifera]
          Length = 1188

 Score = 50.1 bits (118), Expect(2) = 3e-07
 Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 10/87 (11%)
 Frame = -2

Query: 246 LRNISSLENHPDV----------NIELKGAPESHSLLRKRKREFNGEKNPEPLHDLVMDI 97
           L N+S+ EN  +           N  ++ A  +++L RKRK+ F+G+K      DL++ +
Sbjct: 122 LSNMSNNENQTNFDSGSVIEGVRNELMEEASATYTLERKRKK-FHGDKQEGSSDDLILSL 180

Query: 96  LRSTSGNVLDEQNCKKFIQVFDSVNCL 16
           L+S     LD+QNC+  I+V +SVNCL
Sbjct: 181 LKSPCKIFLDKQNCEILIRVLESVNCL 207



 Score = 29.6 bits (65), Expect(2) = 3e-07
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = -3

Query: 332 AGPSTGPSETLSSKLAESSWSDLMQDL 252
           A  S  P+++  S  A+S+WSD+MQDL
Sbjct: 93  ATTSEVPNQSPVSNFADSAWSDMMQDL 119


>ref|XP_006440816.1| hypothetical protein CICLE_v10018555mg [Citrus clementina]
           gi|557543078|gb|ESR54056.1| hypothetical protein
           CICLE_v10018555mg [Citrus clementina]
          Length = 1216

 Score = 51.6 bits (122), Expect(2) = 9e-07
 Identities = 26/61 (42%), Positives = 36/61 (59%)
 Frame = -2

Query: 192 GAPESHSLLRKRKREFNGEKNPEPLHDLVMDILRSTSGNVLDEQNCKKFIQVFDSVNCLS 13
           G   S  L  KRKR           +D +  ++RSTS N L+ QNC+KF++V +SVNCLS
Sbjct: 148 GCISSDPLETKRKRGAECNDQGGRPYDFLWSVMRSTSKNALEGQNCEKFVEVLESVNCLS 207

Query: 12  N 10
           +
Sbjct: 208 D 208



 Score = 26.6 bits (57), Expect(2) = 9e-07
 Identities = 10/19 (52%), Positives = 17/19 (89%)
 Frame = -3

Query: 302 LSSKLAESSWSDLMQDLSS 246
           +S+K A+S++SD+MQ+ SS
Sbjct: 105 ISNKFADSTYSDMMQEFSS 123


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