BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00018435
         (1429 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30774.3| unnamed protein product [Vitis vinifera]              332   3e-88
ref|XP_006355563.1| PREDICTED: pentatricopeptide repeat-containi...   324   5e-86
ref|XP_006449586.1| hypothetical protein CICLE_v10016169mg [Citr...   324   6e-86
gb|EOY27863.1| Pentatricopeptide repeat superfamily protein [The...   323   8e-86
ref|XP_004232997.1| PREDICTED: pentatricopeptide repeat-containi...   323   8e-86
gb|EMJ13198.1| hypothetical protein PRUPE_ppa011078mg [Prunus pe...   322   2e-85
ref|XP_002316747.1| predicted protein [Populus trichocarpa]           317   1e-83
ref|XP_003546058.1| PREDICTED: pentatricopeptide repeat-containi...   313   9e-83
gb|ACU23441.1| unknown [Glycine max]                                  313   9e-83
ref|XP_006467567.1| PREDICTED: pentatricopeptide repeat-containi...   313   1e-82
gb|ESW19954.1| hypothetical protein PHAVU_006G168700g [Phaseolus...   312   2e-82
ref|XP_004294568.1| PREDICTED: pentatricopeptide repeat-containi...   310   7e-82
ref|XP_004164255.1| PREDICTED: pentatricopeptide repeat-containi...   310   7e-82
ref|XP_004499754.1| PREDICTED: pentatricopeptide repeat-containi...   309   2e-81
ref|XP_002526919.1| conserved hypothetical protein [Ricinus comm...   308   3e-81
gb|EXB58283.1| hypothetical protein L484_015617 [Morus notabilis]     303   1e-79
ref|XP_002867967.1| hypothetical protein ARALYDRAFT_914772 [Arab...   297   8e-78
ref|NP_001031667.1| pentatricopeptide repeat-containing protein ...   293   9e-77
ref|NP_567571.1| pentatricopeptide repeat-containing protein [Ar...   293   9e-77
ref|XP_006848146.1| hypothetical protein AMTR_s00029p00227910 [A...   285   3e-74

>emb|CBI30774.3| unnamed protein product [Vitis vinifera]
          Length = 277

 Score =  332 bits (850), Expect = 3e-88
 Identities = 165/221 (74%), Positives = 182/221 (82%), Gaps = 1/221 (0%)
 Frame = -2

Query: 1071 YNEKSKKTTQKA-RKEHHLWQKRESTKSGQKALNLVRIISALPNEKEAVYGALDKWIAWE 895
            Y    K+ ++K  +KEHHLW+KR+S  SGQKALNLVRI+S LPNEKEAVYGALDKW AWE
Sbjct: 56   YRAVEKEISKKVGKKEHHLWRKRDSIGSGQKALNLVRIVSELPNEKEAVYGALDKWTAWE 115

Query: 894  AEFPXXXXXXXXXXXXXRNQWVRLIQVAKWMLSKGQGATMATYDSLLLAFDMDQRVDEAE 715
             EFP             RNQW R+IQVAKWMLSKGQGATM TYD+LLLAFDMD RVDEAE
Sbjct: 116  TEFPLIAAAKALRILRKRNQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDWRVDEAE 175

Query: 714  MLWNMILHTHTRSISKQLFSRMISLYDHHSMPEKIIQVFADMEEVGVKPDEDTVRKIARA 535
             LWNMILHTHTRSISKQLFSRMISLYDHH M +K+I+VFADMEE+GVKPDEDTVR++A A
Sbjct: 176  SLWNMILHTHTRSISKQLFSRMISLYDHHDMRDKVIEVFADMEELGVKPDEDTVRRVACA 235

Query: 534  FQTLGQADKRKLVLNKYLSKWKYIHFNGERVRVRRTTDEWE 412
            FQTLGQ DK+KLVL KY  KWKYIHFNGERVRVRR  D W+
Sbjct: 236  FQTLGQEDKQKLVLKKYQCKWKYIHFNGERVRVRR--DAWD 274


>ref|XP_006355563.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
            chloroplastic-like isoform X1 [Solanum tuberosum]
            gi|565378234|ref|XP_006355564.1| PREDICTED:
            pentatricopeptide repeat-containing protein At4g18975,
            chloroplastic-like isoform X2 [Solanum tuberosum]
            gi|565378236|ref|XP_006355565.1| PREDICTED:
            pentatricopeptide repeat-containing protein At4g18975,
            chloroplastic-like isoform X3 [Solanum tuberosum]
          Length = 265

 Score =  324 bits (831), Expect = 5e-86
 Identities = 159/210 (75%), Positives = 177/210 (84%), Gaps = 1/210 (0%)
 Frame = -2

Query: 1056 KKTTQKARK-EHHLWQKRESTKSGQKALNLVRIISALPNEKEAVYGALDKWIAWEAEFPX 880
            +K  QKA K EHHLW+KRES  SGQKALNLVRIIS LPNEKE+VYGALDKWIAWEAEFP 
Sbjct: 53   QKKVQKAGKVEHHLWKKRESAGSGQKALNLVRIISGLPNEKESVYGALDKWIAWEAEFPL 112

Query: 879  XXXXXXXXXXXXRNQWVRLIQVAKWMLSKGQGATMATYDSLLLAFDMDQRVDEAEMLWNM 700
                        +  W R+IQVAKWMLSKGQGATMATYD+LLLAFDMD RVDEAE LWNM
Sbjct: 113  IAAAKALRILRQQRLWKRVIQVAKWMLSKGQGATMATYDALLLAFDMDNRVDEAETLWNM 172

Query: 699  ILHTHTRSISKQLFSRMISLYDHHSMPEKIIQVFADMEEVGVKPDEDTVRKIARAFQTLG 520
            ILHT TRS+SK+LFSRMISLYDHH +P+KI++VFADMEE+GVKPDEDTV ++ARAFQ LG
Sbjct: 173  ILHTSTRSVSKRLFSRMISLYDHHHVPDKIVEVFADMEELGVKPDEDTVGRVARAFQMLG 232

Query: 519  QADKRKLVLNKYLSKWKYIHFNGERVRVRR 430
            Q DK+KLVL KY S+WKY+HFNGER RVRR
Sbjct: 233  QEDKQKLVLKKYQSRWKYVHFNGERARVRR 262


>ref|XP_006449586.1| hypothetical protein CICLE_v10016169mg [Citrus clementina]
            gi|557552197|gb|ESR62826.1| hypothetical protein
            CICLE_v10016169mg [Citrus clementina]
          Length = 284

 Score =  324 bits (830), Expect = 6e-86
 Identities = 159/218 (72%), Positives = 177/218 (81%)
 Frame = -2

Query: 1068 NEKSKKTTQKARKEHHLWQKRESTKSGQKALNLVRIISALPNEKEAVYGALDKWIAWEAE 889
            ++K+K   +  +KE HLWQKR+S  SGQKALNLVRI+S LPNEK AVYGALDKW AWE E
Sbjct: 62   SKKNKLVVKVGKKEQHLWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETE 121

Query: 888  FPXXXXXXXXXXXXXRNQWVRLIQVAKWMLSKGQGATMATYDSLLLAFDMDQRVDEAEML 709
            FP             R QW+R+IQVAKWMLSKGQGATM TYD+LLLAFD D R DEAE L
Sbjct: 122  FPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESL 181

Query: 708  WNMILHTHTRSISKQLFSRMISLYDHHSMPEKIIQVFADMEEVGVKPDEDTVRKIARAFQ 529
            WNMILHTHTRSISK+LFSRMISLYDHH MP KII+VFADMEE+GV+PDEDTVR+IA AFQ
Sbjct: 182  WNMILHTHTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQ 241

Query: 528  TLGQADKRKLVLNKYLSKWKYIHFNGERVRVRRTTDEW 415
             +GQ +K+KLVL KYLSKWKYIHF GERVRVRR  D W
Sbjct: 242  RVGQDEKQKLVLKKYLSKWKYIHFKGERVRVRR--DAW 277


>gb|EOY27863.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
          Length = 276

 Score =  323 bits (829), Expect = 8e-86
 Identities = 161/217 (74%), Positives = 180/217 (82%), Gaps = 1/217 (0%)
 Frame = -2

Query: 1077 GLYNEKSKKTTQKARK-EHHLWQKRESTKSGQKALNLVRIISALPNEKEAVYGALDKWIA 901
            G+     KK  +K  K EHHLW+KR+S  SGQKALNLVRIIS LPNEKEAVYGALDKW A
Sbjct: 54   GISEAVEKKPVKKVGKNEHHLWKKRDSAGSGQKALNLVRIISQLPNEKEAVYGALDKWTA 113

Query: 900  WEAEFPXXXXXXXXXXXXXRNQWVRLIQVAKWMLSKGQGATMATYDSLLLAFDMDQRVDE 721
            WE EFP             R+QW+R+IQVAKWMLSKGQGATM TYD+LLLAFDMD+RVDE
Sbjct: 114  WETEFPLIAAAKALRILRKRSQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDE 173

Query: 720  AEMLWNMILHTHTRSISKQLFSRMISLYDHHSMPEKIIQVFADMEEVGVKPDEDTVRKIA 541
            AE LWNMILH HTRSISK+LFSRMISLYDHH+M +KII+VFADMEE+ V+PDE+TVRK+A
Sbjct: 174  AESLWNMILHIHTRSISKRLFSRMISLYDHHNMQDKIIEVFADMEELCVRPDENTVRKVA 233

Query: 540  RAFQTLGQADKRKLVLNKYLSKWKYIHFNGERVRVRR 430
            RAFQ LGQ DK+KLVL +YLSKWKYIHFNGERVRV R
Sbjct: 234  RAFQKLGQEDKQKLVLRRYLSKWKYIHFNGERVRVTR 270


>ref|XP_004232997.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
            chloroplastic-like [Solanum lycopersicum]
          Length = 265

 Score =  323 bits (829), Expect = 8e-86
 Identities = 158/210 (75%), Positives = 176/210 (83%), Gaps = 1/210 (0%)
 Frame = -2

Query: 1056 KKTTQKARK-EHHLWQKRESTKSGQKALNLVRIISALPNEKEAVYGALDKWIAWEAEFPX 880
            +K  QKA K EHHLW+KRES  SGQKALNLVRIIS LPNEKE+VYGALDKWIAWE EFP 
Sbjct: 53   QKKVQKAGKVEHHLWKKRESAGSGQKALNLVRIISGLPNEKESVYGALDKWIAWETEFPL 112

Query: 879  XXXXXXXXXXXXRNQWVRLIQVAKWMLSKGQGATMATYDSLLLAFDMDQRVDEAEMLWNM 700
                        +  W R+IQVAKWMLSKGQGATMATYD+LLLAFDMD RVDEAE LWNM
Sbjct: 113  IAAAKALRILRQQRLWKRVIQVAKWMLSKGQGATMATYDALLLAFDMDNRVDEAETLWNM 172

Query: 699  ILHTHTRSISKQLFSRMISLYDHHSMPEKIIQVFADMEEVGVKPDEDTVRKIARAFQTLG 520
            ILHT TRS+SK+LFSRMISLYDHH +P+KI++VFADMEE+GVKPDEDTVR++ARAFQ LG
Sbjct: 173  ILHTSTRSVSKRLFSRMISLYDHHHVPDKIVEVFADMEELGVKPDEDTVRRVARAFQMLG 232

Query: 519  QADKRKLVLNKYLSKWKYIHFNGERVRVRR 430
            Q D +KLVL KY S+WKY+HFNGER RVRR
Sbjct: 233  QEDNQKLVLKKYQSRWKYVHFNGERARVRR 262


>gb|EMJ13198.1| hypothetical protein PRUPE_ppa011078mg [Prunus persica]
          Length = 224

 Score =  322 bits (825), Expect = 2e-85
 Identities = 159/218 (72%), Positives = 178/218 (81%), Gaps = 1/218 (0%)
 Frame = -2

Query: 1062 KSKKTTQKA-RKEHHLWQKRESTKSGQKALNLVRIISALPNEKEAVYGALDKWIAWEAEF 886
            K +KT +K  RKEHHLWQKR+S  SGQKALNLVRI+S LPNEKE VYGALDKW AWE EF
Sbjct: 2    KCRKTIKKVGRKEHHLWQKRDSAGSGQKALNLVRIVSGLPNEKETVYGALDKWTAWETEF 61

Query: 885  PXXXXXXXXXXXXXRNQWVRLIQVAKWMLSKGQGATMATYDSLLLAFDMDQRVDEAEMLW 706
            P             R+QWVR+IQVAKWMLSKGQGATM TYD+LLLAFDMDQRVDEAE LW
Sbjct: 62   PLIAAVKALRILRKRSQWVRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDQRVDEAESLW 121

Query: 705  NMILHTHTRSISKQLFSRMISLYDHHSMPEKIIQVFADMEEVGVKPDEDTVRKIARAFQT 526
            NMILHTHTRSISK+LFSRMISLYDHH    KII+VFADMEE+GVKPDEDTVR++ARAF+ 
Sbjct: 122  NMILHTHTRSISKRLFSRMISLYDHHDKQNKIIEVFADMEELGVKPDEDTVRRVARAFKE 181

Query: 525  LGQADKRKLVLNKYLSKWKYIHFNGERVRVRRTTDEWE 412
            LGQ + + LVL +Y  KWKYIHF GERV+VR  T+ W+
Sbjct: 182  LGQEENKTLVLRRYQCKWKYIHFKGERVKVR--TNAWD 217


>ref|XP_002316747.1| predicted protein [Populus trichocarpa]
          Length = 272

 Score =  317 bits (811), Expect = 1e-83
 Identities = 156/237 (65%), Positives = 182/237 (76%)
 Frame = -2

Query: 1125 VSCPNDMTEIISSTDKGLYNEKSKKTTQKARKEHHLWQKRESTKSGQKALNLVRIISALP 946
            V C     ++ S  D     E  K   +  +KEHHLWQKR+S  SGQKALNLVRI+S LP
Sbjct: 40   VKCSKKQLKLNSRAD-----ENRKVVKKSGKKEHHLWQKRDSAGSGQKALNLVRIVSELP 94

Query: 945  NEKEAVYGALDKWIAWEAEFPXXXXXXXXXXXXXRNQWVRLIQVAKWMLSKGQGATMATY 766
            NEKEAVYGALDKW AWE EFP             R QW R+IQVAKWMLSKGQGAT+ TY
Sbjct: 95   NEKEAVYGALDKWTAWETEFPLIAAAKALKILQQRRQWTRVIQVAKWMLSKGQGATLGTY 154

Query: 765  DSLLLAFDMDQRVDEAEMLWNMILHTHTRSISKQLFSRMISLYDHHSMPEKIIQVFADME 586
            D+LLLAFD D RVDEA+ LWNMI+H HTRS+SK+LFSRMISLYDHH+M ++II+VFADME
Sbjct: 155  DTLLLAFDKDDRVDEAKSLWNMIIHVHTRSMSKRLFSRMISLYDHHNMQDEIIEVFADME 214

Query: 585  EVGVKPDEDTVRKIARAFQTLGQADKRKLVLNKYLSKWKYIHFNGERVRVRRTTDEW 415
            E+GV+PDEDTV ++ARAF+ LGQ +KR+LVL +YL KWKYIHFNGERVRV+R  D W
Sbjct: 215  ELGVRPDEDTVWRVARAFKKLGQEEKRELVLERYLCKWKYIHFNGERVRVKR--DGW 269


>ref|XP_003546058.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
            chloroplastic-like isoform X1 [Glycine max]
            gi|571517206|ref|XP_006597502.1| PREDICTED:
            pentatricopeptide repeat-containing protein At4g18975,
            chloroplastic-like isoform X2 [Glycine max]
          Length = 288

 Score =  313 bits (803), Expect = 9e-83
 Identities = 155/222 (69%), Positives = 177/222 (79%)
 Frame = -2

Query: 1077 GLYNEKSKKTTQKARKEHHLWQKRESTKSGQKALNLVRIISALPNEKEAVYGALDKWIAW 898
            G   +K KKTT K  KEHHLW+ R+S +SGQKAL LVR +  LPNEKEAVYGALDKW AW
Sbjct: 65   GPMEKKGKKTTGK--KEHHLWKSRDSAQSGQKALALVRTVYKLPNEKEAVYGALDKWTAW 122

Query: 897  EAEFPXXXXXXXXXXXXXRNQWVRLIQVAKWMLSKGQGATMATYDSLLLAFDMDQRVDEA 718
            E EFP             R  WVR+IQVAKWMLSKGQGATM TYD+LLLAFDMD+RVDEA
Sbjct: 123  ETEFPVIAVSKALKILRKRGHWVRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEA 182

Query: 717  EMLWNMILHTHTRSISKQLFSRMISLYDHHSMPEKIIQVFADMEEVGVKPDEDTVRKIAR 538
            E LWNMI+H H RS+SK+LFSRMISLYDHH+MP+KII VFADMEE+ +KPDEDTVR++AR
Sbjct: 183  ESLWNMIIHAHMRSVSKRLFSRMISLYDHHNMPDKIIDVFADMEELRLKPDEDTVRRVAR 242

Query: 537  AFQTLGQADKRKLVLNKYLSKWKYIHFNGERVRVRRTTDEWE 412
            AF+ LG  +KRKLV+ +Y  KWKYIHFNGERVRVR  T+ WE
Sbjct: 243  AFRELGDEEKRKLVIKQYGLKWKYIHFNGERVRVR--TEAWE 282


>gb|ACU23441.1| unknown [Glycine max]
          Length = 288

 Score =  313 bits (803), Expect = 9e-83
 Identities = 155/222 (69%), Positives = 177/222 (79%)
 Frame = -2

Query: 1077 GLYNEKSKKTTQKARKEHHLWQKRESTKSGQKALNLVRIISALPNEKEAVYGALDKWIAW 898
            G   +K KKTT K  KEHHLW+ R+S +SGQKAL LVR +  LPNEKEAVYGALDKW AW
Sbjct: 65   GPMEKKGKKTTGK--KEHHLWKSRDSAQSGQKALALVRTVYKLPNEKEAVYGALDKWTAW 122

Query: 897  EAEFPXXXXXXXXXXXXXRNQWVRLIQVAKWMLSKGQGATMATYDSLLLAFDMDQRVDEA 718
            E EFP             R  WVR+IQVAKWMLSKGQGATM TYD+LLLAFDMD+RVDEA
Sbjct: 123  ETEFPVIAVSKALKILRKRGHWVRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEA 182

Query: 717  EMLWNMILHTHTRSISKQLFSRMISLYDHHSMPEKIIQVFADMEEVGVKPDEDTVRKIAR 538
            E LWNMI+H H RS+SK+LFSRMISLYDHH+MP+KII VFADMEE+ +KPDEDTVR++AR
Sbjct: 183  ESLWNMIIHAHLRSVSKRLFSRMISLYDHHNMPDKIIDVFADMEELRLKPDEDTVRRVAR 242

Query: 537  AFQTLGQADKRKLVLNKYLSKWKYIHFNGERVRVRRTTDEWE 412
            AF+ LG  +KRKLV+ +Y  KWKYIHFNGERVRVR  T+ WE
Sbjct: 243  AFRELGDEEKRKLVIKQYGLKWKYIHFNGERVRVR--TEAWE 282


>ref|XP_006467567.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
            chloroplastic-like [Citrus sinensis]
          Length = 281

 Score =  313 bits (802), Expect = 1e-82
 Identities = 164/259 (63%), Positives = 188/259 (72%)
 Frame = -2

Query: 1191 VQKAKKFIIFSEKARGIIPMKKVSCPNDMTEIISSTDKGLYNEKSKKTTQKARKEHHLWQ 1012
            +Q A  F + + K     P  K     +    +S+++    ++K+K   +  +KE HLWQ
Sbjct: 22   LQTASGFSLLTTKLATSNPHLKCFLNQNKQPPVSNSNANA-SKKNKLVVKVGKKEQHLWQ 80

Query: 1011 KRESTKSGQKALNLVRIISALPNEKEAVYGALDKWIAWEAEFPXXXXXXXXXXXXXRNQW 832
            KR+S  SGQKALNLV   S LPNEK AVYGALDKW AWE EFP             R QW
Sbjct: 81   KRDSAGSGQKALNLV---SELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQW 137

Query: 831  VRLIQVAKWMLSKGQGATMATYDSLLLAFDMDQRVDEAEMLWNMILHTHTRSISKQLFSR 652
            +R+IQVAKWMLSKGQGATM TYD+LLLAFD D R DEAE LWNMILHT TRSISK+LFSR
Sbjct: 138  LRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSR 197

Query: 651  MISLYDHHSMPEKIIQVFADMEEVGVKPDEDTVRKIARAFQTLGQADKRKLVLNKYLSKW 472
            MISLYDHH MP KII+VFADMEE+GV+PDEDTVR+IA AFQ +GQ DK+KLVL KYLSKW
Sbjct: 198  MISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYLSKW 257

Query: 471  KYIHFNGERVRVRRTTDEW 415
            KYIHF GERVRVRR  D W
Sbjct: 258  KYIHFKGERVRVRR--DAW 274


>gb|ESW19954.1| hypothetical protein PHAVU_006G168700g [Phaseolus vulgaris]
          Length = 289

 Score =  312 bits (800), Expect = 2e-82
 Identities = 153/211 (72%), Positives = 174/211 (82%)
 Frame = -2

Query: 1065 EKSKKTTQKARKEHHLWQKRESTKSGQKALNLVRIISALPNEKEAVYGALDKWIAWEAEF 886
            +K KKTT K  KEHHLW+ R+S +SGQKAL LVRI+S LPNEKEAVYGALDKWIAWE EF
Sbjct: 70   KKGKKTTGK--KEHHLWKSRDSAQSGQKALTLVRIVSKLPNEKEAVYGALDKWIAWETEF 127

Query: 885  PXXXXXXXXXXXXXRNQWVRLIQVAKWMLSKGQGATMATYDSLLLAFDMDQRVDEAEMLW 706
            P             R  WVR+IQVAKWMLSKGQGATM T+D+LLLAFDMDQRVDEAE LW
Sbjct: 128  PVIAAAKALKILRKRGHWVRVIQVAKWMLSKGQGATMGTFDTLLLAFDMDQRVDEAESLW 187

Query: 705  NMILHTHTRSISKQLFSRMISLYDHHSMPEKIIQVFADMEEVGVKPDEDTVRKIARAFQT 526
            NMI+HTH RS+SK+LFSRMIS+YD+H MP+KII+VFADMEE+ VKPDEDTVR++ARAF  
Sbjct: 188  NMIIHTHMRSVSKRLFSRMISIYDNHDMPDKIIEVFADMEELRVKPDEDTVRRVARAFTE 247

Query: 525  LGQADKRKLVLNKYLSKWKYIHFNGERVRVR 433
            LG+ +KRKLV  +Y  KWKYIHFN ERVRVR
Sbjct: 248  LGEEEKRKLVARRYGIKWKYIHFNRERVRVR 278


>ref|XP_004294568.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 300

 Score =  310 bits (795), Expect = 7e-82
 Identities = 153/215 (71%), Positives = 173/215 (80%), Gaps = 1/215 (0%)
 Frame = -2

Query: 1056 KKTTQKA-RKEHHLWQKRESTKSGQKALNLVRIISALPNEKEAVYGALDKWIAWEAEFPX 880
            KK  +KA R EHHLW+K++S  SGQKALNL+RI+S LPNEKEA++GALDKW AWE EFP 
Sbjct: 80   KKIIKKAGRNEHHLWKKKDSAGSGQKALNLIRIVSDLPNEKEAIFGALDKWTAWETEFPL 139

Query: 879  XXXXXXXXXXXXRNQWVRLIQVAKWMLSKGQGATMATYDSLLLAFDMDQRVDEAEMLWNM 700
                          QW R+IQVAKWMLSKGQGATMATYD+LLLAFDMD R+DEAE LWNM
Sbjct: 140  IAAAKALRILRRTCQWRRVIQVAKWMLSKGQGATMATYDTLLLAFDMDNRLDEAESLWNM 199

Query: 699  ILHTHTRSISKQLFSRMISLYDHHSMPEKIIQVFADMEEVGVKPDEDTVRKIARAFQTLG 520
            ILHTHTRSISK+LFSRMISLYDHH M  KII+VFADMEE+ V+PDEDTVR++ARAFQ  G
Sbjct: 200  ILHTHTRSISKRLFSRMISLYDHHEMKTKIIEVFADMEELSVRPDEDTVRRVARAFQEFG 259

Query: 519  QADKRKLVLNKYLSKWKYIHFNGERVRVRRTTDEW 415
            Q DK KLVL +Y  KWKYIHF GERV+VR  T+ W
Sbjct: 260  QEDKSKLVLRRYGCKWKYIHFKGERVKVR--TNAW 292


>ref|XP_004164255.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
            chloroplastic-like [Cucumis sativus]
          Length = 270

 Score =  310 bits (795), Expect = 7e-82
 Identities = 158/266 (59%), Positives = 189/266 (71%), Gaps = 1/266 (0%)
 Frame = -2

Query: 1206 SHGFAVQKAKKFIIFSEKARGIIPMKKVSCPNDMTEIISSTDKGLYNEKSKKTTQKARKE 1027
            S GF     K   I+        P   +   N   + ++S     +    ++  +K  KE
Sbjct: 8    STGFDALMPKIDCIYYHNKFTFTPSSVICVHNQAAQPLTS-----FTTPERRVVKKVGKE 62

Query: 1026 -HHLWQKRESTKSGQKALNLVRIISALPNEKEAVYGALDKWIAWEAEFPXXXXXXXXXXX 850
             HHLW+KR+S  SGQKALNLVRI+S  PNEKEAVYG L+KWIAWE EFP           
Sbjct: 63   THHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRIL 122

Query: 849  XXRNQWVRLIQVAKWMLSKGQGATMATYDSLLLAFDMDQRVDEAEMLWNMILHTHTRSIS 670
              R+QW R+IQVAKWMLSKGQGATM TYD+LLLAFDMD+RVDEAE LWNMILHTHTRSIS
Sbjct: 123  RKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSIS 182

Query: 669  KQLFSRMISLYDHHSMPEKIIQVFADMEEVGVKPDEDTVRKIARAFQTLGQADKRKLVLN 490
            K++FSRMISLY+HH + +KII++FADMEE+GVKPDEDTVR++ RAFQ LGQ D RK+V  
Sbjct: 183  KRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVCRAFQKLGQEDNRKMVYK 242

Query: 489  KYLSKWKYIHFNGERVRVRRTTDEWE 412
            +Y  +WKYIHF GERVRVRR  D W+
Sbjct: 243  RYSCQWKYIHFKGERVRVRR--DGWD 266


>ref|XP_004499754.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
            chloroplastic-like isoform X5 [Cicer arietinum]
          Length = 287

 Score =  309 bits (791), Expect = 2e-81
 Identities = 154/242 (63%), Positives = 183/242 (75%), Gaps = 2/242 (0%)
 Frame = -2

Query: 1131 KKVSCPN-DMTEIISSTDKGLYNEKSKKTTQ-KARKEHHLWQKRESTKSGQKALNLVRII 958
            +K SC +    +  SS + G   EK KK  + K + EHHLW++R S +SGQKAL LVR I
Sbjct: 46   RKTSCTSCRFVQSKSSPNVGRPVEKDKKGNKIKGKVEHHLWKRRNSAQSGQKALTLVRTI 105

Query: 957  SALPNEKEAVYGALDKWIAWEAEFPXXXXXXXXXXXXXRNQWVRLIQVAKWMLSKGQGAT 778
              LPNEKE+VYGALDKW AWE EFP             R QWVR+IQ+AKWMLSKGQGAT
Sbjct: 106  CELPNEKESVYGALDKWTAWETEFPLVAAAKALNILRKRGQWVRVIQLAKWMLSKGQGAT 165

Query: 777  MATYDSLLLAFDMDQRVDEAEMLWNMILHTHTRSISKQLFSRMISLYDHHSMPEKIIQVF 598
            M TYD+LLLAFDMDQR+DEAE LWNMI+H H RS+SK+LFSRMISLYDHH++ EKI+++F
Sbjct: 166  MGTYDTLLLAFDMDQRIDEAESLWNMIIHAHMRSVSKRLFSRMISLYDHHNLSEKIVEIF 225

Query: 597  ADMEEVGVKPDEDTVRKIARAFQTLGQADKRKLVLNKYLSKWKYIHFNGERVRVRRTTDE 418
            ADMEE+ +KPDEDTVRK+  AF+ LGQ +KRK V+ +Y  KWKYIHFNGERVRVRR    
Sbjct: 226  ADMEELRIKPDEDTVRKVTNAFRKLGQEEKRKSVIKRYGLKWKYIHFNGERVRVRR--QA 283

Query: 417  WE 412
            WE
Sbjct: 284  WE 285


>ref|XP_002526919.1| conserved hypothetical protein [Ricinus communis]
            gi|223533738|gb|EEF35472.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 224

 Score =  308 bits (790), Expect = 3e-81
 Identities = 145/209 (69%), Positives = 174/209 (83%), Gaps = 1/209 (0%)
 Frame = -2

Query: 1068 NEKSKKTTQKARKE-HHLWQKRESTKSGQKALNLVRIISALPNEKEAVYGALDKWIAWEA 892
            ++KS+K  +KA KE HHLW+KR+S +SG+KAL+LVRI+  LP+EKE VYGALDKW AWE 
Sbjct: 6    DDKSRKPVKKAGKEEHHLWKKRDSARSGEKALSLVRIVCELPDEKECVYGALDKWTAWET 65

Query: 891  EFPXXXXXXXXXXXXXRNQWVRLIQVAKWMLSKGQGATMATYDSLLLAFDMDQRVDEAEM 712
            EFP              NQW+R+IQVAKWMLSKGQG TM TYD+LLLAFDMD RVDEA  
Sbjct: 66   EFPLIAVAKGLRILRKHNQWLRVIQVAKWMLSKGQGTTMGTYDTLLLAFDMDNRVDEAAS 125

Query: 711  LWNMILHTHTRSISKQLFSRMISLYDHHSMPEKIIQVFADMEEVGVKPDEDTVRKIARAF 532
            LWNMILHTH RSISK+LFSRMISLYDHH+MP+ II++FADMEE+GV+PDEDTVR++ARAF
Sbjct: 126  LWNMILHTHVRSISKRLFSRMISLYDHHNMPDGIIEIFADMEELGVRPDEDTVRRVARAF 185

Query: 531  QTLGQADKRKLVLNKYLSKWKYIHFNGER 445
            + LGQ +K+KLVL +Y+S+WKYIHF GER
Sbjct: 186  KELGQEEKQKLVLKRYMSRWKYIHFKGER 214


>gb|EXB58283.1| hypothetical protein L484_015617 [Morus notabilis]
          Length = 326

 Score =  303 bits (776), Expect = 1e-79
 Identities = 145/215 (67%), Positives = 171/215 (79%)
 Frame = -2

Query: 1074 LYNEKSKKTTQKARKEHHLWQKRESTKSGQKALNLVRIISALPNEKEAVYGALDKWIAWE 895
            LY E      +  +KE+HLW+K++S  SGQKALNL+RI+S LPNEKE VYGAL+KWIAWE
Sbjct: 101  LYMEFRNLVKKTGKKEYHLWKKKDSAGSGQKALNLIRILSVLPNEKEVVYGALNKWIAWE 160

Query: 894  AEFPXXXXXXXXXXXXXRNQWVRLIQVAKWMLSKGQGATMATYDSLLLAFDMDQRVDEAE 715
             EFP             R+QW R+IQVAKWMLSKGQG TM TYD+LLLAFDMDQRVDEAE
Sbjct: 161  TEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGTTMGTYDTLLLAFDMDQRVDEAE 220

Query: 714  MLWNMILHTHTRSISKQLFSRMISLYDHHSMPEKIIQVFADMEEVGVKPDEDTVRKIARA 535
              WNMILHTH RSISK+LFSRMI+LYDHH + +KII+VFADMEE+ V+ DEDTVR++A A
Sbjct: 221  SFWNMILHTHKRSISKRLFSRMIALYDHHDVKDKIIEVFADMEELSVRLDEDTVRRVAYA 280

Query: 534  FQTLGQADKRKLVLNKYLSKWKYIHFNGERVRVRR 430
            FQ LGQ +K+KL+L KY  KWKY+HF GER+RVRR
Sbjct: 281  FQKLGQEEKKKLLLRKYQCKWKYVHFKGERIRVRR 315


>ref|XP_002867967.1| hypothetical protein ARALYDRAFT_914772 [Arabidopsis lyrata subsp.
            lyrata] gi|297313803|gb|EFH44226.1| hypothetical protein
            ARALYDRAFT_914772 [Arabidopsis lyrata subsp. lyrata]
          Length = 284

 Score =  297 bits (760), Expect = 8e-78
 Identities = 140/214 (65%), Positives = 175/214 (81%)
 Frame = -2

Query: 1059 SKKTTQKARKEHHLWQKRESTKSGQKALNLVRIISALPNEKEAVYGALDKWIAWEAEFPX 880
            S +  +  +KEHHLW+K +S  SGQKALNLVR++S LPNEKEAVYGAL+KW+AWE EFP 
Sbjct: 69   SNEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVEFPI 128

Query: 879  XXXXXXXXXXXXRNQWVRLIQVAKWMLSKGQGATMATYDSLLLAFDMDQRVDEAEMLWNM 700
                        R+QW R+IQ+AKWMLSKGQGATM TYD+LLLAFDMDQR DEAE LWNM
Sbjct: 129  IAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDTLLLAFDMDQRADEAESLWNM 188

Query: 699  ILHTHTRSISKQLFSRMISLYDHHSMPEKIIQVFADMEEVGVKPDEDTVRKIARAFQTLG 520
            ILHTHTRSI ++LF+RMI+LY H+ + +K+I+VFADMEE+ V+PDEDT R++ARAF+ LG
Sbjct: 189  ILHTHTRSIPRRLFARMIALYAHYDLHDKVIEVFADMEELKVRPDEDTARRVARAFRELG 248

Query: 519  QADKRKLVLNKYLSKWKYIHFNGERVRVRRTTDE 418
            Q + RKL+L +YLS++KYI+FNGERVRV+R + E
Sbjct: 249  QEENRKLILRRYLSEFKYIYFNGERVRVKRYSSE 282


>ref|NP_001031667.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|332658716|gb|AEE84116.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 260

 Score =  293 bits (751), Expect = 9e-77
 Identities = 139/214 (64%), Positives = 172/214 (80%)
 Frame = -2

Query: 1059 SKKTTQKARKEHHLWQKRESTKSGQKALNLVRIISALPNEKEAVYGALDKWIAWEAEFPX 880
            SK+  +  +KEHHLW+K +S  SGQKALNLVR++S LPNEKEAVYGAL+KW+AWE EFP 
Sbjct: 45   SKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVEFPI 104

Query: 879  XXXXXXXXXXXXRNQWVRLIQVAKWMLSKGQGATMATYDSLLLAFDMDQRVDEAEMLWNM 700
                        R+QW R+IQ+AKWMLSKGQGATM TYD LLLAFDMD+R DEAE LWNM
Sbjct: 105  IAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESLWNM 164

Query: 699  ILHTHTRSISKQLFSRMISLYDHHSMPEKIIQVFADMEEVGVKPDEDTVRKIARAFQTLG 520
            ILHTHTRSI ++LF+RMI+LY HH + +K+I+VFADMEE+ V PDED+ R++ARAF+ L 
Sbjct: 165  ILHTHTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFRELN 224

Query: 519  QADKRKLVLNKYLSKWKYIHFNGERVRVRRTTDE 418
            Q + RKL+L +YLS++KYI+FNGERVRV+R   E
Sbjct: 225  QEENRKLILRRYLSEYKYIYFNGERVRVKRYFSE 258


>ref|NP_567571.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|186512032|ref|NP_001119009.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
            gi|334186688|ref|NP_001190768.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
            gi|223635632|sp|Q2V3H0.2|PP322_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At4g18975, chloroplastic; Flags: Precursor
            gi|332658715|gb|AEE84115.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
            gi|332658717|gb|AEE84117.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
            gi|332658718|gb|AEE84118.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 287

 Score =  293 bits (751), Expect = 9e-77
 Identities = 139/214 (64%), Positives = 172/214 (80%)
 Frame = -2

Query: 1059 SKKTTQKARKEHHLWQKRESTKSGQKALNLVRIISALPNEKEAVYGALDKWIAWEAEFPX 880
            SK+  +  +KEHHLW+K +S  SGQKALNLVR++S LPNEKEAVYGAL+KW+AWE EFP 
Sbjct: 72   SKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVEFPI 131

Query: 879  XXXXXXXXXXXXRNQWVRLIQVAKWMLSKGQGATMATYDSLLLAFDMDQRVDEAEMLWNM 700
                        R+QW R+IQ+AKWMLSKGQGATM TYD LLLAFDMD+R DEAE LWNM
Sbjct: 132  IAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESLWNM 191

Query: 699  ILHTHTRSISKQLFSRMISLYDHHSMPEKIIQVFADMEEVGVKPDEDTVRKIARAFQTLG 520
            ILHTHTRSI ++LF+RMI+LY HH + +K+I+VFADMEE+ V PDED+ R++ARAF+ L 
Sbjct: 192  ILHTHTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFRELN 251

Query: 519  QADKRKLVLNKYLSKWKYIHFNGERVRVRRTTDE 418
            Q + RKL+L +YLS++KYI+FNGERVRV+R   E
Sbjct: 252  QEENRKLILRRYLSEYKYIYFNGERVRVKRYFSE 285


>ref|XP_006848146.1| hypothetical protein AMTR_s00029p00227910 [Amborella trichopoda]
            gi|548851451|gb|ERN09727.1| hypothetical protein
            AMTR_s00029p00227910 [Amborella trichopoda]
          Length = 287

 Score =  285 bits (730), Expect = 3e-74
 Identities = 139/219 (63%), Positives = 173/219 (78%)
 Frame = -2

Query: 1068 NEKSKKTTQKARKEHHLWQKRESTKSGQKALNLVRIISALPNEKEAVYGALDKWIAWEAE 889
            +EK KK     +KEHHLW KR+S  S QKALNLVRI+S + NEKEA+Y ALD+W AWE E
Sbjct: 72   DEKPKKLF---KKEHHLWMKRDSAGSSQKALNLVRIVSRVSNEKEAIYVALDEWAAWETE 128

Query: 888  FPXXXXXXXXXXXXXRNQWVRLIQVAKWMLSKGQGATMATYDSLLLAFDMDQRVDEAEML 709
            FP             R +W+R+IQV+KW+LSKGQ  TM TYD+LLLAFDMD RVDEAE +
Sbjct: 129  FPVIAAAKALGILRKRRRWLRVIQVSKWLLSKGQVLTMGTYDTLLLAFDMDGRVDEAETI 188

Query: 708  WNMILHTHTRSISKQLFSRMISLYDHHSMPEKIIQVFADMEEVGVKPDEDTVRKIARAFQ 529
            WNMILHT+TRSISK+LFSRM+SLYDHH +P+K+++VFADMEE+GVKPD+D+VR++ARAFQ
Sbjct: 189  WNMILHTYTRSISKRLFSRMMSLYDHHHIPDKLLEVFADMEELGVKPDQDSVRRVARAFQ 248

Query: 528  TLGQADKRKLVLNKYLSKWKYIHFNGERVRVRRTTDEWE 412
             LG+ +K+K VL KY  K KYIHFNGERVR+ +  + W+
Sbjct: 249  QLGEEEKQKQVLQKYGLKLKYIHFNGERVRI-KAGENWD 286