BLASTX nr result

ID: Catharanthus23_contig00018262 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00018262
         (834 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65091.1| hypothetical protein VITISV_035036 [Vitis vinifera]    63   1e-07

>emb|CAN65091.1| hypothetical protein VITISV_035036 [Vitis vinifera]
          Length = 795

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 71/249 (28%), Positives = 102/249 (40%), Gaps = 8/249 (3%)
 Frame = -3

Query: 832 SPEAHSRSFLHGCSSPSKAVKTTNSSKDLMSEMVNLEVELDAMMQDIDLPFCKSSVEQPF 653
           SP    R   + CS   K  +   SSK+L   + +LEVE+ + MQDI++    +S+E PF
Sbjct: 208 SPHQPHRVSSYDCSL-LKDARQLRSSKNLNFVLDDLEVEVGSKMQDINMSPSGNSLELPF 266

Query: 652 YSKKRVDSSFSKPKQRLA-FEEFSPXXXXXXXXXXXXXXXXLFYGSKDRNKAIWNGSQIL 476
           Y    ++  FS PKQ ++ F +F                   FY  KD+N+ IWNGS   
Sbjct: 267 Y-PMGIEDPFSNPKQGVSTFRDFMHXGGHSSKIRXSFGDEETFYNIKDKNENIWNGSVGF 325

Query: 475 ADDVLYES----DFHLSDKNW---MDSTCKSTEFANSMDYRKKRFTFEGLEQQERRFRS* 317
            D   Y S    +   S K+W   MD T  S +F  + ++    FT EG           
Sbjct: 326 PD---YNSPDDWECDXSWKHWPGQMDGT--SADFVKTGNHELLDFTSEG----------- 369

Query: 316 KLISVLLKYIMQFLSHLIGFFGPCRTTMRKACELDCTESPVPKFKHQKLENLSNFTVPDM 137
                          H I      R  M+     + ++   P  +HQ  EN  +F   D 
Sbjct: 370 ---------------HCI---SKKRNAMKARDRFNISDLSAPYLRHQTSENDHDFATSDG 411

Query: 136 TWHSTIGRD 110
           T  S   +D
Sbjct: 412 TQVSYARKD 420


Top