BLASTX nr result
ID: Catharanthus23_contig00018241
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00018241
(386 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EAZ04413.1| hypothetical protein OsI_26557 [Oryza sativa Indi... 97 2e-18
gb|AAO00713.1| retrotransposon protein, putative, unclassified [... 96 5e-18
gb|AAP54692.2| retrotransposon protein, putative, unclassified [... 96 5e-18
gb|EEC83784.1| hypothetical protein OsI_29682 [Oryza sativa Indi... 95 1e-17
gb|EAZ40370.1| hypothetical protein OsJ_24816 [Oryza sativa Japo... 95 1e-17
gb|EEE55075.1| hypothetical protein OsJ_02804 [Oryza sativa Japo... 94 2e-17
gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indi... 93 3e-17
ref|XP_004289445.1| PREDICTED: putative ribonuclease H protein A... 92 7e-17
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga... 91 1e-16
ref|XP_004306074.1| PREDICTED: putative ribonuclease H protein A... 91 2e-16
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S... 90 4e-16
gb|EAY85477.1| hypothetical protein OsI_06852 [Oryza sativa Indi... 90 4e-16
gb|EMJ08972.1| hypothetical protein PRUPE_ppa026368mg, partial [... 89 6e-16
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ... 89 6e-16
gb|EEE51936.1| hypothetical protein OsJ_33562 [Oryza sativa Japo... 89 8e-16
gb|EMS67416.1| Protein argonaute 1D [Triticum urartu] 88 1e-15
ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein A... 88 1e-15
ref|XP_003566324.1| PREDICTED: putative ribonuclease H protein A... 88 1e-15
gb|EAZ09713.1| hypothetical protein OsI_32001 [Oryza sativa Indi... 88 1e-15
gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas... 88 1e-15
>gb|EAZ04413.1| hypothetical protein OsI_26557 [Oryza sativa Indica Group]
Length = 374
Score = 97.4 bits (241), Expect = 2e-18
Identities = 48/121 (39%), Positives = 75/121 (61%), Gaps = 7/121 (5%)
Frame = +1
Query: 4 KGLLEELESLNRKFFWADEDQKRRLHTVAWSTICRNKSEGGLGIKDLEHMNMTLLAKLAW 183
K L +E+ SL +FFWA D++ ++H +AW +C +GGLG +DL N+ +LA+ AW
Sbjct: 56 KTLCDEISSLISRFFWAQHDRENKMHWIAWDKLCSRTEKGGLGYRDLHLFNLAMLARQAW 115
Query: 184 QMISNPESLWAKVL*KKY--DSPLCNRTWNANISHAWRAILIGASVL-----WKIG*SHD 342
+++SN +SL A+VL KY D L + IS++WR+I+ G VL W++G S D
Sbjct: 116 RLLSNLDSLCARVLKAKYFPDGKLMEVRESPGISYSWRSIVRGVQVLKVGLIWRVGDSTD 175
Query: 343 L 345
+
Sbjct: 176 I 176
>gb|AAO00713.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1557
Score = 95.9 bits (237), Expect = 5e-18
Identities = 47/117 (40%), Positives = 72/117 (61%), Gaps = 7/117 (5%)
Frame = +1
Query: 1 PKGLLEELESLNRKFFWADEDQKRRLHTVAWSTICRNKSEGGLGIKDLEHMNMTLLAKLA 180
P+ + E+L SL R F+W E KR+ H AW ++ ++KS GGLG KD+ N LLA+ A
Sbjct: 1180 PESVCEDLTSLTRNFWWGAEKGKRKTHWKAWKSLTKSKSLGGLGFKDIRLFNQALLARQA 1239
Query: 181 WQMISNPESLWAKVL*KKY--DSPLCNRTWNANISHAWRAI-----LIGASVLWKIG 330
W++I NP+SL A+VL KY + + + ++ N S W+AI L+ ++W+IG
Sbjct: 1240 WRLIDNPDSLCARVLKAKYYPNGSIVDTSFGGNASPGWQAIEHGLELVKKGIIWRIG 1296
>gb|AAP54692.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1585
Score = 95.9 bits (237), Expect = 5e-18
Identities = 47/117 (40%), Positives = 72/117 (61%), Gaps = 7/117 (5%)
Frame = +1
Query: 1 PKGLLEELESLNRKFFWADEDQKRRLHTVAWSTICRNKSEGGLGIKDLEHMNMTLLAKLA 180
P+ + E+L SL R F+W E KR+ H AW ++ ++KS GGLG KD+ N LLA+ A
Sbjct: 1208 PESVCEDLTSLTRNFWWGAEKGKRKTHWKAWKSLTKSKSLGGLGFKDIRLFNQALLARQA 1267
Query: 181 WQMISNPESLWAKVL*KKY--DSPLCNRTWNANISHAWRAI-----LIGASVLWKIG 330
W++I NP+SL A+VL KY + + + ++ N S W+AI L+ ++W+IG
Sbjct: 1268 WRLIDNPDSLCARVLKAKYYPNGSIVDTSFGGNASPGWQAIEHGLELVKKGIIWRIG 1324
>gb|EEC83784.1| hypothetical protein OsI_29682 [Oryza sativa Indica Group]
Length = 666
Score = 94.7 bits (234), Expect = 1e-17
Identities = 47/117 (40%), Positives = 73/117 (62%), Gaps = 7/117 (5%)
Frame = +1
Query: 1 PKGLLEELESLNRKFFWADEDQKRRLHTVAWSTICRNKSEGGLGIKDLEHMNMTLLAKLA 180
P G+ EEL + R F+W ++ KR++H AWS + ++K+ GGLG +D++ N LLA+ A
Sbjct: 165 PDGVCEELTKIIRNFWWGSDNGKRKVHWKAWSQLTKSKNAGGLGFRDMKAFNQALLARQA 224
Query: 181 WQMISNPESLWAKVL*KKY--DSPLCNRTWNANISHAWRAI-----LIGASVLWKIG 330
W++I NP SL A+VL KY + L + ++ N S WRAI L+ ++W+IG
Sbjct: 225 WRLIDNPVSLCARVLKAKYYPNGCLMDTVFSGNASPTWRAIEHGLELLKEGLVWRIG 281
>gb|EAZ40370.1| hypothetical protein OsJ_24816 [Oryza sativa Japonica Group]
Length = 613
Score = 94.7 bits (234), Expect = 1e-17
Identities = 47/121 (38%), Positives = 73/121 (60%), Gaps = 7/121 (5%)
Frame = +1
Query: 4 KGLLEELESLNRKFFWADEDQKRRLHTVAWSTICRNKSEGGLGIKDLEHMNMTLLAKLAW 183
K L +E+ SL +FFWA D++ ++H +AW +C +GGLG +DL N+ +LA AW
Sbjct: 56 KTLYDEISSLISRFFWAQHDRENKMHWIAWDKLCSRTEKGGLGYRDLHLFNLAMLAHQAW 115
Query: 184 QMISNPESLWAKVL*KKY--DSPLCNRTWNANISHAWRAILIGASVL-----WKIG*SHD 342
+++SN +SL A+VL KY D L + IS++WR+I+ G VL W++G D
Sbjct: 116 RLLSNLDSLCARVLKAKYFPDGKLMEVRESPGISYSWRSIVRGVQVLKVGLIWRVGDGTD 175
Query: 343 L 345
+
Sbjct: 176 I 176
>gb|EEE55075.1| hypothetical protein OsJ_02804 [Oryza sativa Japonica Group]
Length = 287
Score = 93.6 bits (231), Expect = 2e-17
Identities = 50/128 (39%), Positives = 71/128 (55%), Gaps = 7/128 (5%)
Frame = +1
Query: 1 PKGLLEELESLNRKFFWADEDQKRRLHTVAWSTICRNKSEGGLGIKDLEHMNMTLLAKLA 180
P+ + EEL L R F+W E KR+ H +W + R KS GGLG +D N LLA+ A
Sbjct: 90 PESVCEELTKLTRNFWWGVEKGKRKTHWKSWECLTRPKSNGGLGFRDFRLFNQALLARQA 149
Query: 181 WQMISNPESLWAKVL*KKY--DSPLCNRTWNANISHAWRAILIGAS-----VLWKIG*SH 339
W++I NP+SL A+VL KY + L + ++ N S W+AI G S ++W+IG
Sbjct: 150 WRLIVNPDSLCARVLKAKYFPNGSLVDTSFGGNASPVWKAIEYGLSLLKEGIIWRIGNGK 209
Query: 340 DLAASISR 363
+ S R
Sbjct: 210 SMLESKER 217
>gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indica Group]
Length = 1784
Score = 93.2 bits (230), Expect = 3e-17
Identities = 48/117 (41%), Positives = 68/117 (58%), Gaps = 7/117 (5%)
Frame = +1
Query: 1 PKGLLEELESLNRKFFWADEDQKRRLHTVAWSTICRNKSEGGLGIKDLEHMNMTLLAKLA 180
P+ + EEL L R F+W E KR+ H +W + R KS GGLG +D N LLA+ A
Sbjct: 816 PESVCEELTKLTRNFWWGVEKGKRKTHWKSWECLTRPKSNGGLGFRDFRLFNQALLARQA 875
Query: 181 WQMISNPESLWAKVL*KKY--DSPLCNRTWNANISHAWRAILIGAS-----VLWKIG 330
W++I NP+SL A+VL KY + L + ++ N S W+AI G S ++W+IG
Sbjct: 876 WRLIVNPDSLCARVLKAKYFPNGSLVDTSFGGNASPVWKAIEYGLSLLKEGIIWRIG 932
Score = 93.2 bits (230), Expect = 3e-17
Identities = 48/117 (41%), Positives = 68/117 (58%), Gaps = 7/117 (5%)
Frame = +1
Query: 1 PKGLLEELESLNRKFFWADEDQKRRLHTVAWSTICRNKSEGGLGIKDLEHMNMTLLAKLA 180
P+ + EEL L R F+W E KR+ H +W + R KS GGLG +D N LLA+ A
Sbjct: 1514 PESVCEELTKLTRNFWWGVEKGKRKTHWKSWECLTRPKSNGGLGFRDFRLFNQALLARQA 1573
Query: 181 WQMISNPESLWAKVL*KKY--DSPLCNRTWNANISHAWRAILIGAS-----VLWKIG 330
W++I NP+SL A+VL KY + L + ++ N S W+AI G S ++W+IG
Sbjct: 1574 WRLIVNPDSLCARVLKAKYFPNGSLVDTSFGGNASPVWKAIEYGLSLLKEGIIWRIG 1630
>ref|XP_004289445.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 719
Score = 92.0 bits (227), Expect = 7e-17
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 9/119 (7%)
Frame = +1
Query: 1 PKGLLEELESLNRKFFWADEDQKRRLHTVAWSTICRNKSEGGLGIKDLEHMNMTLLAKLA 180
P L E ++ N F W D ++K+++H V W ++C+ K GGLG+K MN +LAK +
Sbjct: 362 PLSLCESIDKANINFLWGDSNEKKKIHLVNWESVCKPKHRGGLGLKKTADMNQAMLAKAS 421
Query: 181 WQMISNPESLWAKVL*KKYDSPLCNRTWN----ANISHAWRAILIGASVL-----WKIG 330
W++ N LWA + KKY C + N A+ S+ WR I+ G ++ W+IG
Sbjct: 422 WRIFQNDHGLWADIYRKKYLQDCCIESSNSIAPADCSNTWRGIVHGVELMRRNLKWRIG 480
>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1378
Score = 91.3 bits (225), Expect = 1e-16
Identities = 40/111 (36%), Positives = 64/111 (57%), Gaps = 3/111 (2%)
Frame = +1
Query: 1 PKGLLEELESLNRKFFWADEDQKRRLHTVAWSTICRNKSEGGLGIKDLEHMNMTLLAKLA 180
P+ ++++ +R F W +++ KRR+H VAW I ++K EGGLGI+ + N L KL
Sbjct: 817 PRSTCDDIDRKSRSFLWGEQEGKRRVHLVAWENISKSKKEGGLGIRSMRQANSAFLVKLG 876
Query: 181 WQMISNPESLWAKVL*KKYDSPLCNRTW---NANISHAWRAILIGASVLWK 324
W++++ P SLW+++L KY C+ +N S WR IL V+ K
Sbjct: 877 WRLLAEPSSLWSRILRAKYCDNRCDIDMFKEKSNASSTWRGILSSIDVVRK 927
>ref|XP_004306074.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 407
Score = 90.9 bits (224), Expect = 2e-16
Identities = 44/119 (36%), Positives = 64/119 (53%), Gaps = 9/119 (7%)
Frame = +1
Query: 1 PKGLLEELESLNRKFFWADEDQKRRLHTVAWSTICRNKSEGGLGIKDLEHMNMTLLAKLA 180
P L E L+ LNR F W D + K+++H V W +C+ K G +GIK E MN +LAK++
Sbjct: 74 PVSLCENLDKLNRNFLWGDTEIKKKVHLVNWDVVCQPKQLGDIGIKKTEDMNQAMLAKIS 133
Query: 181 WQMISNPESLWAKVL*KKYDSPLC----NRTWNANISHAWRAILIGASVL-----WKIG 330
W+M + LWA + +KY C N + S WR I+ GA +L W++G
Sbjct: 134 WRMFQCDKGLWASMFAEKYLKNCCLFDDNYEVAVDCSSTWRGIIFGAKLLRSNLKWRLG 192
>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
gi|241926916|gb|EES00061.1| hypothetical protein
SORBIDRAFT_03g001780 [Sorghum bicolor]
Length = 631
Score = 89.7 bits (221), Expect = 4e-16
Identities = 39/116 (33%), Positives = 76/116 (65%), Gaps = 7/116 (6%)
Frame = +1
Query: 4 KGLLEELESLNRKFFWADEDQKRRLHTVAWSTICRNKSEGGLGIKDLEHMNMTLLAKLAW 183
KGL +EL S+ +++W+ +D+ ++H ++W + ++K +GGLG +DL N+ +L++ AW
Sbjct: 393 KGLCDELSSIIGRYWWSQQDKANKIHWISWEKLTQSKEKGGLGFRDLHLFNLAMLSRQAW 452
Query: 184 QMISNPESLWAKVL*KKY--DSPLCNRTWNANISHAWRAILIGAS-----VLWKIG 330
++++NP+SL +VL +Y S + + + IS+ WR+IL G + ++W+IG
Sbjct: 453 RLLTNPDSLCGQVLKARYFPHSDILHCSPRPRISYTWRSILKGVALLKEGIIWRIG 508
>gb|EAY85477.1| hypothetical protein OsI_06852 [Oryza sativa Indica Group]
Length = 313
Score = 89.7 bits (221), Expect = 4e-16
Identities = 43/114 (37%), Positives = 70/114 (61%), Gaps = 5/114 (4%)
Frame = +1
Query: 4 KGLLEELESLNRKFFWADEDQKRRLHTVAWSTICRNKSEGGLGIKDLEHMNMTLLAKLAW 183
K L +++ L FFWA +D++ ++H ++W +C K +GGLG +DL N+ +LA+ AW
Sbjct: 193 KTLCDKISMLICHFFWAQQDRENKMHWISWEHLCSQKDKGGLGYRDLHLFNLGMLARQAW 252
Query: 184 QMISNPESLWAKVL*KKYDSPLCNRTWNANISHAWRAILIG-----ASVLWKIG 330
Q++SNPESL A VL KY IS++WR+I+ G + ++W++G
Sbjct: 253 QLLSNPESLCAWVLRAKYFHEGKLLEVGPGISYSWRSIVRGVQALKSGLIWRVG 306
>gb|EMJ08972.1| hypothetical protein PRUPE_ppa026368mg, partial [Prunus persica]
Length = 1060
Score = 89.0 bits (219), Expect = 6e-16
Identities = 44/117 (37%), Positives = 64/117 (54%), Gaps = 7/117 (5%)
Frame = +1
Query: 1 PKGLLEELESLNRKFFWADEDQKRRLHTVAWSTICRNKSEGGLGIKDLEHMNMTLLAKLA 180
PKGL +EL + +F+WA KR +H V W +C++K GGLG +DLE N LLAK
Sbjct: 514 PKGLCKELNGIMARFWWAKAKDKRGIHWVKWELLCKSKFAGGLGFRDLEAFNQALLAKQC 573
Query: 181 WQMISNPESLWAKVL*KKY--DSPLCNRTWNANISHAWRAILIGASVL-----WKIG 330
W+++ PESL A++ +Y P N S WR++ G +L W++G
Sbjct: 574 WRILRTPESLVARIFRARYHPSVPFLEAEVGTNPSFIWRSLQWGKELLNKGLRWRVG 630
>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
gi|7268307|emb|CAB78601.1| reverse transcriptase like
protein [Arabidopsis thaliana]
Length = 929
Score = 89.0 bits (219), Expect = 6e-16
Identities = 41/106 (38%), Positives = 68/106 (64%), Gaps = 4/106 (3%)
Frame = +1
Query: 1 PKGLLEELESLNRKFFWADEDQKRRLHTVAWSTICRNKSEGGLGIKDLEHMNMTLLAKLA 180
P LLE+L+ ++R F W +KR+ H ++W +CR K+ GGLG++ + MN LLAK+
Sbjct: 609 PASLLEQLDKVSRNFLWGSTVEKRKQHLLSWKKVCRPKAAGGLGLRASKDMNRALLAKVG 668
Query: 181 WQMISNPESLWAKVL*KKYD-SPLCNRTW---NANISHAWRAILIG 306
W+++++ SLWA+VL +KY + + + +W A S WR+I +G
Sbjct: 669 WRLLNDKVSLWARVLRRKYKVTDVHDSSWLVPKATWSSTWRSIGVG 714
>gb|EEE51936.1| hypothetical protein OsJ_33562 [Oryza sativa Japonica Group]
Length = 419
Score = 88.6 bits (218), Expect = 8e-16
Identities = 46/117 (39%), Positives = 66/117 (56%), Gaps = 7/117 (5%)
Frame = +1
Query: 1 PKGLLEELESLNRKFFWADEDQKRRLHTVAWSTICRNKSEGGLGIKDLEHMNMTLLAKLA 180
P + E+L L R F+W ++ +R+ H AW + + K GGLG KD+ N LLA+ A
Sbjct: 298 PDSVCEDLTRLTRNFWWGADNGRRKTHWRAWECLTKPKRNGGLGFKDIRLFNQALLARQA 357
Query: 181 WQMISNPESLWAKVL*KKY--DSPLCNRTWNANISHAWRAI-----LIGASVLWKIG 330
W++I P+SL AKVL KY L + T+ N S AWR I L+ ++W+IG
Sbjct: 358 WRLIEFPDSLCAKVLKAKYYPHGSLIDTTFGPNASPAWRGIEHGLDLLKKGIIWRIG 414
>gb|EMS67416.1| Protein argonaute 1D [Triticum urartu]
Length = 1573
Score = 88.2 bits (217), Expect = 1e-15
Identities = 43/116 (37%), Positives = 68/116 (58%), Gaps = 7/116 (6%)
Frame = +1
Query: 1 PKGLLEELESLNRKFFWADEDQKRRLHTVAWSTICRNKSEGGLGIKDLEHMNMTLLAKLA 180
P L EEL + R F+W DE+ +R+ H +AW + + K+E G+G +DL N LLAK A
Sbjct: 1049 PASLCEELAQIIRNFWWGDEENRRKTHWLAWDKMTKPKAEDGMGFRDLRLFNQALLAKQA 1108
Query: 181 WQMISNPESLWAKVL*KKY--DSPLCNRTWNANISHAWRAILIG-----ASVLWKI 327
W+++ NPESL A+V+ KY + + + + S W+ IL G + V+W++
Sbjct: 1109 WRLVVNPESLCARVIKAKYYPQGHILDTAFPQSASLTWQGILHGLELLKSGVIWRV 1164
>ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 1152
Score = 88.2 bits (217), Expect = 1e-15
Identities = 41/108 (37%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Frame = +1
Query: 1 PKGLLEELESLNRKFFWADEDQKRRLHTVAWSTICRNKSEGGLGIKDLEHMNMTLLAKLA 180
P+ L E+ L +F+W + +R++H +AW +C +K EGGLG +D+ N LLAK
Sbjct: 569 PRHLCNEMHQLMARFWWGEFGDERKIHWIAWDKLCSSKKEGGLGFRDMHVFNKALLAKQG 628
Query: 181 WQMISNPESLWAKVL*KKY--DSPLCNRTWNANISHAWRAILIGASVL 318
W+M+ P+SL A+VL KY S L IS++WR+++ G +L
Sbjct: 629 WRMLCRPQSLLAQVLKMKYFPTSSLIQAEVGKRISYSWRSLMRGKELL 676
>ref|XP_003566324.1| PREDICTED: putative ribonuclease H protein At1g65750-like
[Brachypodium distachyon]
Length = 776
Score = 88.2 bits (217), Expect = 1e-15
Identities = 45/116 (38%), Positives = 67/116 (57%), Gaps = 7/116 (6%)
Frame = +1
Query: 4 KGLLEELESLNRKFFWADEDQKRRLHTVAWSTICRNKSEGGLGIKDLEHMNMTLLAKLAW 183
KGL E+LE L R F W DE+ KR++H +AW + + KS+GG+G +D+ N LLAK AW
Sbjct: 8 KGLCEDLEQLTRNFLWGDEENKRKVHWLAWEKMIQPKSKGGMGFRDMALFNQALLAKQAW 67
Query: 184 QMISNPESLWAKVL*KKY--DSPLCNRTWNANISHAWRAILIGASVL-----WKIG 330
++I P+S A+++ KY L + + S W+ I G +L W+IG
Sbjct: 68 RLIDKPDSFCARLIKAKYFPHGNLLDTAVIQSSSPVWQGIKHGLDLLKKGYIWRIG 123
>gb|EAZ09713.1| hypothetical protein OsI_32001 [Oryza sativa Indica Group]
Length = 350
Score = 88.2 bits (217), Expect = 1e-15
Identities = 47/117 (40%), Positives = 65/117 (55%), Gaps = 7/117 (5%)
Frame = +1
Query: 1 PKGLLEELESLNRKFFWADEDQKRRLHTVAWSTICRNKSEGGLGIKDLEHMNMTLLAKLA 180
P E+L L R F+W E KR+ H AW + + K GGLG KD + N LLA+ A
Sbjct: 52 PDSTCEDLNKLARNFWWGAEQGKRKTHWRAWKYLTKAKQYGGLGFKDFKLFNQALLARQA 111
Query: 181 WQMISNPESLWAKVL*KKY--DSPLCNRTWNANISHAWRAI-----LIGASVLWKIG 330
W++I NP+SL A+VL KY + L + ++ N S WRAI LI +W++G
Sbjct: 112 WRLIVNPDSLCARVLKAKYFPNGTLVDTCFSGNASPGWRAIEFGLELIKKGCIWRVG 168
>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase);
Polynucleotidyl transferase, Ribonuclease H fold
[Medicago truncatula]
Length = 729
Score = 88.2 bits (217), Expect = 1e-15
Identities = 47/137 (34%), Positives = 67/137 (48%), Gaps = 11/137 (8%)
Frame = +1
Query: 1 PKGLLEELESLNRKFFWADEDQKRRLHTVAWSTICRNKSEGGLGIKDLEHMNMTLLAKLA 180
PK + +E+E + R F W D +Q R+ H V+W C K GGLG K HMN L K+
Sbjct: 241 PKTICDEIEKIQRGFVWGDSNQGRKAHLVSWDVCCLPKMNGGLGFKRPHHMNEAFLMKML 300
Query: 181 WQMISNPESLWAKVL*KKYDSPLCNRTWNANISH------AWRAIL-----IGASVLWKI 327
W +I P+ LW +VL KY N N NIS W+AI+ V+W+I
Sbjct: 301 WNLIKQPDKLWCRVLYSKYGR---NNDLNNNISSQPYDSPLWKAIVGIWDDFKRHVIWQI 357
Query: 328 G*SHDLAASISRLVTSN 378
G + + +++N
Sbjct: 358 GDGRSTNFWLDKWISNN 374