BLASTX nr result

ID: Catharanthus23_contig00018173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00018173
         (525 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006355211.1| PREDICTED: putative late blight resistance p...    56   6e-06
ref|XP_004246080.1| PREDICTED: putative late blight resistance p...    55   7e-06
ref|XP_006346790.1| PREDICTED: putative late blight resistance p...    55   1e-05

>ref|XP_006355211.1| PREDICTED: putative late blight resistance protein homolog
           R1A-10-like [Solanum tuberosum]
          Length = 498

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/56 (50%), Positives = 36/56 (64%)
 Frame = -2

Query: 524 LKSCCQLKEVPSCLGSIATLRIIKVEQCIELDVESVRQIQQEQVDMGNNEFKVIID 357
           LK C +LKE+P   G I +L  I++  C  L  ES R+I+QEQ DMGNN  KV I+
Sbjct: 442 LKKCKKLKEIPIDFGEICSLESIELHNCSTLAEESARKIEQEQEDMGNNFLKVYIN 497


>ref|XP_004246080.1| PREDICTED: putative late blight resistance protein homolog
           R1C-3-like [Solanum lycopersicum]
          Length = 405

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/56 (50%), Positives = 36/56 (64%)
 Frame = -2

Query: 524 LKSCCQLKEVPSCLGSIATLRIIKVEQCIELDVESVRQIQQEQVDMGNNEFKVIID 357
           LK C +LKE+P   G I +L  I++  C  L  ES R+I+QEQ DMGNN  KV I+
Sbjct: 349 LKECRKLKEIPIDFGEICSLESIELHNCSTLAEESARKIEQEQEDMGNNCLKVYIN 404


>ref|XP_006346790.1| PREDICTED: putative late blight resistance protein homolog
            R1B-23-like [Solanum tuberosum]
          Length = 890

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
 Frame = -2

Query: 524  LKSCCQLKEVPSCLGSIATLRIIKVEQCIELDVESVRQIQQEQVDMGNNEFKVIIDHPN- 348
            LK C  L+E+P+  G I TL  +++  C     +S + I++EQ DMGNN  KV I H N 
Sbjct: 825  LKKCRHLQEIPADFGEICTLESVELHDCSATAEDSAKNIEREQEDMGNNILKVYIIHNND 884

Query: 347  WD 342
            WD
Sbjct: 885  WD 886


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