BLASTX nr result
ID: Catharanthus23_contig00018125
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00018125
(444 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ESW03822.1| hypothetical protein PHAVU_011G044900g [Phaseolus... 56 4e-08
ref|XP_003537885.2| PREDICTED: protein RADIALIS-like 1-like [Gly... 54 5e-08
ref|XP_002313044.2| hypothetical protein POPTR_0009s11990g [Popu... 54 8e-08
ref|XP_003540679.1| PREDICTED: protein RADIALIS-like 1-like [Gly... 53 3e-07
gb|EOY14788.1| RAD-like 6 [Theobroma cacao] 51 1e-06
ref|XP_004230980.1| PREDICTED: protein RADIALIS-like 6-like [Sol... 45 1e-06
sp|Q58FS3.1|RAD_ANTMA RecName: Full=Transcription factor RADIALI... 49 2e-06
ref|XP_002306110.2| hypothetical protein POPTR_0004s16320g [Popu... 49 2e-06
ref|XP_006365112.1| PREDICTED: protein RADIALIS-like 5-like [Sol... 44 2e-06
ref|XP_004292033.1| PREDICTED: protein RADIALIS-like 6-like [Fra... 50 4e-06
ref|XP_003631666.1| PREDICTED: uncharacterized protein LOC100853... 50 4e-06
ref|XP_006423271.1| hypothetical protein CICLE_v10029663mg [Citr... 50 7e-06
>gb|ESW03822.1| hypothetical protein PHAVU_011G044900g [Phaseolus vulgaris]
Length = 100
Score = 55.8 bits (133), Expect(2) = 4e-08
Identities = 26/57 (45%), Positives = 41/57 (71%)
Frame = -1
Query: 276 RWQKTQAVGGEKSTDEVKQNFEILYENLKLIESGSCAYIPKYRTSGFNNKVDEKKKV 106
RWQ G+KS DEVK+++EIL E+L+ IESG +PKYR++G + VD+++++
Sbjct: 38 RWQNVATAVGDKSPDEVKRHYEILLEDLRHIESGHVP-LPKYRSTGSSTNVDDEERL 93
Score = 27.3 bits (59), Expect(2) = 4e-08
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = -2
Query: 332 QENKLLERALIQFDKDTSE 276
++NKL E+AL ++DKDT +
Sbjct: 19 KQNKLFEKALAKYDKDTPD 37
>ref|XP_003537885.2| PREDICTED: protein RADIALIS-like 1-like [Glycine max]
Length = 100
Score = 54.3 bits (129), Expect(2) = 5e-08
Identities = 26/57 (45%), Positives = 40/57 (70%)
Frame = -1
Query: 276 RWQKTQAVGGEKSTDEVKQNFEILYENLKLIESGSCAYIPKYRTSGFNNKVDEKKKV 106
RWQ G KS DEVK+++EIL E+L+ IESG +PKY+++G + VDE++++
Sbjct: 38 RWQNVAKAVGGKSADEVKRHYEILLEDLRHIESGRVP-LPKYKSTGSSTNVDEEERL 93
Score = 28.5 bits (62), Expect(2) = 5e-08
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = -2
Query: 332 QENKLLERALIQFDKDTSE 276
++NKL E+AL ++DKDT E
Sbjct: 19 KQNKLFEKALAKYDKDTPE 37
>ref|XP_002313044.2| hypothetical protein POPTR_0009s11990g [Populus trichocarpa]
gi|550331555|gb|EEE86999.2| hypothetical protein
POPTR_0009s11990g [Populus trichocarpa]
Length = 113
Score = 53.5 bits (127), Expect(2) = 8e-08
Identities = 29/56 (51%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Frame = -1
Query: 276 RWQK-TQAVGGEKSTDEVKQNFEILYENLKLIESGSCAYIPKYRTSGFNNKVDEKK 112
RWQ +AVGG KS +EVK+++EIL E+L+ IESG IPKY++SG N +E++
Sbjct: 37 RWQNIAKAVGGVKSAEEVKKHYEILIEDLQHIESGRIP-IPKYKSSGSCNNTNEEE 91
Score = 28.5 bits (62), Expect(2) = 8e-08
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -2
Query: 332 QENKLLERALIQFDKDTSE 276
+ENKL E+AL FDKDT +
Sbjct: 18 RENKLFEKALALFDKDTPD 36
>ref|XP_003540679.1| PREDICTED: protein RADIALIS-like 1-like [Glycine max]
Length = 100
Score = 52.8 bits (125), Expect(2) = 3e-07
Identities = 25/57 (43%), Positives = 40/57 (70%)
Frame = -1
Query: 276 RWQKTQAVGGEKSTDEVKQNFEILYENLKLIESGSCAYIPKYRTSGFNNKVDEKKKV 106
RWQ G KS DEVK+++EIL E+L+ IESG +PKY+++G + V+E++++
Sbjct: 38 RWQNVAKAVGGKSADEVKRHYEILLEDLRHIESGHVP-LPKYKSTGSSTNVEEEERL 93
Score = 27.3 bits (59), Expect(2) = 3e-07
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = -2
Query: 332 QENKLLERALIQFDKDTSE 276
++NKL E+AL ++DKDT +
Sbjct: 19 KQNKLFEKALAKYDKDTPD 37
>gb|EOY14788.1| RAD-like 6 [Theobroma cacao]
Length = 86
Score = 50.8 bits (120), Expect(2) = 1e-06
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = -1
Query: 276 RWQKTQAVGGEKSTDEVKQNFEILYENLKLIESGSCAYIPKYRTSGFNNK 127
RWQK A GEKS +EV++++EIL +L IESG IP YR++G N +
Sbjct: 38 RWQKVAAAVGEKSAEEVRRHYEILVADLMYIESGQVP-IPNYRSTGSNRR 86
Score = 27.3 bits (59), Expect(2) = 1e-06
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 332 QENKLLERALIQFDKDTSEGGKKL 261
++NKL E+AL +DKDT + +K+
Sbjct: 19 KQNKLFEKALAVYDKDTPDRWQKV 42
>ref|XP_004230980.1| PREDICTED: protein RADIALIS-like 6-like [Solanum lycopersicum]
Length = 88
Score = 44.7 bits (104), Expect(2) = 1e-06
Identities = 24/43 (55%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Frame = -1
Query: 276 RWQKT-QAVGGEKSTDEVKQNFEILYENLKLIESGSCAYIPKY 151
RWQ +AVGG KS DEVK+++EIL E+L+ IESG +P Y
Sbjct: 33 RWQNVARAVGGGKSADEVKRHYEILIEDLRRIESGRVP-LPNY 74
Score = 33.5 bits (75), Expect(2) = 1e-06
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = -2
Query: 332 QENKLLERALIQFDKDTSEGGKKLRR 255
Q+NKL ERAL QFDKDT + + + R
Sbjct: 14 QQNKLFERALAQFDKDTPDRWQNVAR 39
>sp|Q58FS3.1|RAD_ANTMA RecName: Full=Transcription factor RADIALIS gi|118137433|pdb|2CJJ|A
Chain A, Crystal Structure Of The Myb Domain Of The Rad
Transcription Factor From Antirrhinum Majus
gi|61652985|gb|AAX48042.1| RADIALIS [Antirrhinum majus]
Length = 93
Score = 49.3 bits (116), Expect(2) = 2e-06
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = -1
Query: 276 RWQKTQAVGGEKSTDEVKQNFEILYENLKLIESGSCAYIPKYRTSGFNNKVDEKK 112
RW ++ +EVK+++EIL E++K IESG + P YRT+G N K DEK+
Sbjct: 33 RWANVARAVEGRTPEEVKKHYEILVEDIKYIESGKVPF-PNYRTTGGNMKTDEKR 86
Score = 27.7 bits (60), Expect(2) = 2e-06
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -2
Query: 332 QENKLLERALIQFDKDTSEGGKKLRRWA 249
+ENK ERAL +DKDT + RWA
Sbjct: 14 KENKAFERALAVYDKDTPD------RWA 35
>ref|XP_002306110.2| hypothetical protein POPTR_0004s16320g [Populus trichocarpa]
gi|550341151|gb|EEE86621.2| hypothetical protein
POPTR_0004s16320g [Populus trichocarpa]
Length = 100
Score = 48.5 bits (114), Expect(2) = 2e-06
Identities = 26/58 (44%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -1
Query: 276 RWQK-TQAVGGEKSTDEVKQNFEILYENLKLIESGSCAYIPKYRTSGFNNKVDEKKKV 106
RWQ +AVGG KS +E+K+++EIL E+LK IESG IP Y++S + +E++++
Sbjct: 37 RWQNIAKAVGGVKSAEEMKRHYEILIEDLKHIESGRVP-IPNYKSSRSYSNTNEEERL 93
Score = 28.5 bits (62), Expect(2) = 2e-06
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -2
Query: 332 QENKLLERALIQFDKDTSE 276
+ENKL E+AL FDKDT +
Sbjct: 18 RENKLFEKALALFDKDTPD 36
>ref|XP_006365112.1| PREDICTED: protein RADIALIS-like 5-like [Solanum tuberosum]
Length = 88
Score = 43.5 bits (101), Expect(2) = 2e-06
Identities = 22/35 (62%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
Frame = -1
Query: 276 RWQKT-QAVGGEKSTDEVKQNFEILYENLKLIESG 175
RWQ +AVGG KS DEVK+++EIL E+L IESG
Sbjct: 33 RWQNVARAVGGGKSADEVKRHYEILIEDLSRIESG 67
Score = 33.5 bits (75), Expect(2) = 2e-06
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = -2
Query: 332 QENKLLERALIQFDKDTSEGGKKLRR 255
Q+NKL ERAL QFDKDT + + + R
Sbjct: 14 QQNKLFERALAQFDKDTPDRWQNVAR 39
>ref|XP_004292033.1| PREDICTED: protein RADIALIS-like 6-like [Fragaria vesca subsp.
vesca]
Length = 101
Score = 50.1 bits (118), Expect(2) = 4e-06
Identities = 27/59 (45%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Frame = -1
Query: 276 RWQKT-QAVGGEKSTDEVKQNFEILYENLKLIESGSCAYIPKYRTSGF-NNKVDEKKKV 106
RWQ +AVGG K+ +EVK++++IL E+L+ IESG IP Y++ G KVDE++++
Sbjct: 37 RWQNVAKAVGGNKTPEEVKRHYDILLEDLRQIESGQVP-IPNYKSLGITTTKVDEEERL 94
Score = 26.2 bits (56), Expect(2) = 4e-06
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -2
Query: 332 QENKLLERALIQFDKDTSE 276
++NK+ ERAL +DKDT +
Sbjct: 18 KQNKVFERALALYDKDTPD 36
>ref|XP_003631666.1| PREDICTED: uncharacterized protein LOC100853961 [Vitis vinifera]
gi|297741469|emb|CBI32600.3| unnamed protein product
[Vitis vinifera]
Length = 96
Score = 50.1 bits (118), Expect(2) = 4e-06
Identities = 25/57 (43%), Positives = 39/57 (68%)
Frame = -1
Query: 276 RWQKTQAVGGEKSTDEVKQNFEILYENLKLIESGSCAYIPKYRTSGFNNKVDEKKKV 106
RWQ G KS +EVK+++EIL E+LK IESG IP Y+++G N+ D+++++
Sbjct: 34 RWQNVAKAVGGKSAEEVKRHYEILIEDLKHIESGHVP-IPNYKSTGSNSIGDQEQRL 89
Score = 26.2 bits (56), Expect(2) = 4e-06
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -2
Query: 332 QENKLLERALIQFDKDTSE 276
++NKL E+AL +DKDT +
Sbjct: 15 KQNKLFEKALALYDKDTPD 33
>ref|XP_006423271.1| hypothetical protein CICLE_v10029663mg [Citrus clementina]
gi|568829699|ref|XP_006469157.1| PREDICTED: protein
RADIALIS-like 2-like [Citrus sinensis]
gi|557525205|gb|ESR36511.1| hypothetical protein
CICLE_v10029663mg [Citrus clementina]
Length = 96
Score = 49.7 bits (117), Expect(2) = 7e-06
Identities = 25/56 (44%), Positives = 34/56 (60%)
Frame = -1
Query: 276 RWQKTQAVGGEKSTDEVKQNFEILYENLKLIESGSCAYIPKYRTSGFNNKVDEKKK 109
RW G K+ DEVK+++E+L E++K IESG + PKYRT N V E+ K
Sbjct: 37 RWYNVARAVGGKTADEVKKHYELLVEDIKHIESGHVPF-PKYRTPSGNGNVGERMK 91
Score = 25.8 bits (55), Expect(2) = 7e-06
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -2
Query: 332 QENKLLERALIQFDKDTSE 276
++NK ERAL +DKDT +
Sbjct: 18 EQNKAFERALAVYDKDTPD 36