BLASTX nr result
ID: Catharanthus23_contig00018103
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00018103
(507 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004231740.1| PREDICTED: transcription-repair-coupling fac... 129 8e-60
ref|XP_006338749.1| PREDICTED: uncharacterized protein LOC102592... 129 1e-59
gb|EOY02994.1| DEAD/DEAH box helicase [Theobroma cacao] 125 7e-58
ref|XP_002276313.1| PREDICTED: transcription-repair-coupling fac... 125 3e-57
emb|CBI21248.3| unnamed protein product [Vitis vinifera] 125 3e-57
ref|XP_006446881.1| hypothetical protein CICLE_v10017439mg [Citr... 122 8e-57
gb|EXB41421.1| Transcription-repair-coupling factor [Morus notab... 122 2e-56
ref|XP_006468934.1| PREDICTED: uncharacterized protein LOC102609... 121 2e-56
ref|XP_006844670.1| hypothetical protein AMTR_s00016p00242110 [A... 127 4e-56
ref|XP_004493106.1| PREDICTED: transcription-repair-coupling fac... 127 4e-56
gb|EMJ18845.1| hypothetical protein PRUPE_ppa001550mg [Prunus pe... 123 5e-56
ref|XP_004306326.1| PREDICTED: transcription-repair-coupling fac... 122 5e-56
ref|XP_006408576.1| hypothetical protein EUTSA_v10020076mg [Eutr... 126 8e-56
dbj|BAJ34179.1| unnamed protein product [Thellungiella halophila] 126 8e-56
ref|XP_006408575.1| hypothetical protein EUTSA_v10020076mg [Eutr... 126 8e-56
gb|ESW33797.1| hypothetical protein PHAVU_001G099500g [Phaseolus... 121 8e-56
ref|XP_002512803.1| dead box ATP-dependent RNA helicase, putativ... 120 2e-55
ref|XP_003624531.1| Transcription-repair-coupling factor [Medica... 128 2e-55
gb|ABD33152.1| Helicase, C-terminal; Haem peroxidase, plant/fung... 128 2e-55
ref|XP_002884246.1| hypothetical protein ARALYDRAFT_477305 [Arab... 123 4e-55
>ref|XP_004231740.1| PREDICTED: transcription-repair-coupling factor-like [Solanum
lycopersicum]
Length = 826
Score = 129 bits (325), Expect(3) = 8e-60
Identities = 64/74 (86%), Positives = 69/74 (93%)
Frame = +2
Query: 284 VLAKQHYDVVSERFSRYPNIMVGLLSRFQTKSKKEEYLHMIKRGDLDIIVGTHALLGNRV 463
VLAKQH+DV+SERFSRYPNI VGLLSRFQTKS+KEEYL MIK G +DIIVGTH+LLGNRV
Sbjct: 333 VLAKQHFDVISERFSRYPNIRVGLLSRFQTKSEKEEYLSMIKDGHVDIIVGTHSLLGNRV 392
Query: 464 VYNNLGLLVVDEEQ 505
YNNLGLLVVDEEQ
Sbjct: 393 EYNNLGLLVVDEEQ 406
Score = 93.2 bits (230), Expect(3) = 8e-60
Identities = 45/56 (80%), Positives = 50/56 (89%)
Frame = +3
Query: 141 QAFMDVEKDLTERDNPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMFWQNSIMM 308
QAF DVE+DLTE +NPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAM +I++
Sbjct: 279 QAFSDVERDLTESENPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVL 334
Score = 54.7 bits (130), Expect(3) = 8e-60
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = +1
Query: 1 RLKQRRPLYLKTPAMADFASQFRYKPTPHQKKASED 108
RLKQ+RP Y KTPAMA+FASQF ++PTP QK+A D
Sbjct: 248 RLKQKRPPYPKTPAMAEFASQFPFEPTPDQKQAFSD 283
>ref|XP_006338749.1| PREDICTED: uncharacterized protein LOC102592949 [Solanum tuberosum]
Length = 825
Score = 129 bits (324), Expect(3) = 1e-59
Identities = 64/74 (86%), Positives = 69/74 (93%)
Frame = +2
Query: 284 VLAKQHYDVVSERFSRYPNIMVGLLSRFQTKSKKEEYLHMIKRGDLDIIVGTHALLGNRV 463
VLAKQH+DV+SERFSRYPNI VGLLSRFQTKS+KEEYL MIK G +DIIVGTH+LLGNRV
Sbjct: 332 VLAKQHFDVISERFSRYPNIRVGLLSRFQTKSEKEEYLSMIKDGRVDIIVGTHSLLGNRV 391
Query: 464 VYNNLGLLVVDEEQ 505
YNNLGLLVVDEEQ
Sbjct: 392 EYNNLGLLVVDEEQ 405
Score = 93.2 bits (230), Expect(3) = 1e-59
Identities = 45/56 (80%), Positives = 50/56 (89%)
Frame = +3
Query: 141 QAFMDVEKDLTERDNPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMFWQNSIMM 308
QAF DVE+DLTE +NPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAM +I++
Sbjct: 278 QAFSDVERDLTESENPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVL 333
Score = 54.7 bits (130), Expect(3) = 1e-59
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = +1
Query: 1 RLKQRRPLYLKTPAMADFASQFRYKPTPHQKKASED 108
RLKQ+RP Y KTPAMA+FASQF ++PTP QK+A D
Sbjct: 247 RLKQKRPPYPKTPAMAEFASQFPFEPTPDQKQAFSD 282
>gb|EOY02994.1| DEAD/DEAH box helicase [Theobroma cacao]
Length = 1251
Score = 125 bits (313), Expect(3) = 7e-58
Identities = 60/74 (81%), Positives = 71/74 (95%)
Frame = +2
Query: 284 VLAKQHYDVVSERFSRYPNIMVGLLSRFQTKSKKEEYLHMIKRGDLDIIVGTHALLGNRV 463
VLAKQH+DV+SERFS+YP+ VGLLSRFQTK++KEE+L+MIK+GDL IIVGTH+LLG+RV
Sbjct: 342 VLAKQHFDVISERFSKYPSTKVGLLSRFQTKAEKEEHLNMIKKGDLAIIVGTHSLLGSRV 401
Query: 464 VYNNLGLLVVDEEQ 505
VYNNLGLLVVDEEQ
Sbjct: 402 VYNNLGLLVVDEEQ 415
Score = 94.0 bits (232), Expect(3) = 7e-58
Identities = 45/56 (80%), Positives = 51/56 (91%)
Frame = +3
Query: 141 QAFMDVEKDLTERDNPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMFWQNSIMM 308
QAF+DVEKDLTER+ PMDRLICGDVGFGKTEVALRAIFCVVSAG+QAM +I++
Sbjct: 288 QAFIDVEKDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAGRQAMVLAPTIVL 343
Score = 52.0 bits (123), Expect(3) = 7e-58
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +1
Query: 1 RLKQRRPLYLKTPAMADFASQFRYKPTPHQKKASED 108
RLKQRR Y K+PAMA+FA+QF YKPTP QK+A D
Sbjct: 257 RLKQRRSPYPKSPAMAEFAAQFPYKPTPDQKQAFID 292
>ref|XP_002276313.1| PREDICTED: transcription-repair-coupling factor-like [Vitis
vinifera]
Length = 823
Score = 125 bits (315), Expect(3) = 3e-57
Identities = 60/74 (81%), Positives = 70/74 (94%)
Frame = +2
Query: 284 VLAKQHYDVVSERFSRYPNIMVGLLSRFQTKSKKEEYLHMIKRGDLDIIVGTHALLGNRV 463
VLAKQH+DV++ERFS+YPNI VGLLSRFQT ++KE++L MIK GDLDIIVGTH+LLGNRV
Sbjct: 330 VLAKQHFDVITERFSKYPNIKVGLLSRFQTTAEKEKHLRMIKHGDLDIIVGTHSLLGNRV 389
Query: 464 VYNNLGLLVVDEEQ 505
VY+NLGLLVVDEEQ
Sbjct: 390 VYSNLGLLVVDEEQ 403
Score = 93.6 bits (231), Expect(3) = 3e-57
Identities = 45/56 (80%), Positives = 51/56 (91%)
Frame = +3
Query: 141 QAFMDVEKDLTERDNPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMFWQNSIMM 308
QAF+DVE+DLTER+ PMDRLICGDVGFGKTEVALRAIFCVVSAGKQAM +I++
Sbjct: 276 QAFIDVEEDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVL 331
Score = 49.3 bits (116), Expect(3) = 3e-57
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = +1
Query: 1 RLKQRRPLYLKTPAMADFASQFRYKPTPHQKKASED 108
RLKQ+RP Y K+P MA+F +QF Y+PTP QK+A D
Sbjct: 245 RLKQKRPPYPKSPGMAEFEAQFSYEPTPDQKQAFID 280
>emb|CBI21248.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 125 bits (315), Expect(3) = 3e-57
Identities = 60/74 (81%), Positives = 70/74 (94%)
Frame = +2
Query: 284 VLAKQHYDVVSERFSRYPNIMVGLLSRFQTKSKKEEYLHMIKRGDLDIIVGTHALLGNRV 463
VLAKQH+DV++ERFS+YPNI VGLLSRFQT ++KE++L MIK GDLDIIVGTH+LLGNRV
Sbjct: 147 VLAKQHFDVITERFSKYPNIKVGLLSRFQTTAEKEKHLRMIKHGDLDIIVGTHSLLGNRV 206
Query: 464 VYNNLGLLVVDEEQ 505
VY+NLGLLVVDEEQ
Sbjct: 207 VYSNLGLLVVDEEQ 220
Score = 93.6 bits (231), Expect(3) = 3e-57
Identities = 45/56 (80%), Positives = 51/56 (91%)
Frame = +3
Query: 141 QAFMDVEKDLTERDNPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMFWQNSIMM 308
QAF+DVE+DLTER+ PMDRLICGDVGFGKTEVALRAIFCVVSAGKQAM +I++
Sbjct: 93 QAFIDVEEDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVL 148
Score = 49.3 bits (116), Expect(3) = 3e-57
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = +1
Query: 1 RLKQRRPLYLKTPAMADFASQFRYKPTPHQKKASED 108
RLKQ+RP Y K+P MA+F +QF Y+PTP QK+A D
Sbjct: 62 RLKQKRPPYPKSPGMAEFEAQFSYEPTPDQKQAFID 97
>ref|XP_006446881.1| hypothetical protein CICLE_v10017439mg [Citrus clementina]
gi|557549492|gb|ESR60121.1| hypothetical protein
CICLE_v10017439mg [Citrus clementina]
Length = 835
Score = 122 bits (307), Expect(3) = 8e-57
Identities = 60/74 (81%), Positives = 70/74 (94%)
Frame = +2
Query: 284 VLAKQHYDVVSERFSRYPNIMVGLLSRFQTKSKKEEYLHMIKRGDLDIIVGTHALLGNRV 463
VLAKQH+DVVSERFS+YP+I VGLLSRFQ+K++KEE+L MIK G L+IIVGTH+LLG+RV
Sbjct: 342 VLAKQHFDVVSERFSKYPDIKVGLLSRFQSKAEKEEHLDMIKHGHLNIIVGTHSLLGSRV 401
Query: 464 VYNNLGLLVVDEEQ 505
VYNNLGLLVVDEEQ
Sbjct: 402 VYNNLGLLVVDEEQ 415
Score = 92.8 bits (229), Expect(3) = 8e-57
Identities = 44/56 (78%), Positives = 51/56 (91%)
Frame = +3
Query: 141 QAFMDVEKDLTERDNPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMFWQNSIMM 308
+AF+DVE+DLTER+ PMDRLICGDVGFGKTEVALRAIFCVVSAGKQAM +I++
Sbjct: 288 KAFLDVERDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVL 343
Score = 52.0 bits (123), Expect(3) = 8e-57
Identities = 24/36 (66%), Positives = 29/36 (80%)
Frame = +1
Query: 1 RLKQRRPLYLKTPAMADFASQFRYKPTPHQKKASED 108
RLKQ+RP Y K PA+A+FA+QF Y+PTP QKKA D
Sbjct: 257 RLKQKRPPYPKNPAIAEFAAQFPYEPTPDQKKAFLD 292
>gb|EXB41421.1| Transcription-repair-coupling factor [Morus notabilis]
Length = 816
Score = 122 bits (307), Expect(3) = 2e-56
Identities = 59/74 (79%), Positives = 69/74 (93%)
Frame = +2
Query: 284 VLAKQHYDVVSERFSRYPNIMVGLLSRFQTKSKKEEYLHMIKRGDLDIIVGTHALLGNRV 463
VLAKQH+DV+S+RFS YPNI VGLL+RFQT+++KEE+L MIK G LDIIVGTH+LLG+RV
Sbjct: 351 VLAKQHFDVISQRFSMYPNIEVGLLTRFQTRAEKEEHLDMIKNGHLDIIVGTHSLLGSRV 410
Query: 464 VYNNLGLLVVDEEQ 505
VYNNLGLLVVDEEQ
Sbjct: 411 VYNNLGLLVVDEEQ 424
Score = 91.7 bits (226), Expect(3) = 2e-56
Identities = 45/56 (80%), Positives = 49/56 (87%)
Frame = +3
Query: 141 QAFMDVEKDLTERDNPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMFWQNSIMM 308
QAF+DVEKDLTER PMDRLICGDVGFGKTEVALRAIFCVVSA KQAM +I++
Sbjct: 297 QAFIDVEKDLTERHTPMDRLICGDVGFGKTEVALRAIFCVVSAAKQAMVLAPTIVL 352
Score = 52.0 bits (123), Expect(3) = 2e-56
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = +1
Query: 1 RLKQRRPLYLKTPAMADFASQFRYKPTPHQKKASED 108
RLKQ RP Y KTP MADFA+QF Y+PTP QK+A D
Sbjct: 266 RLKQTRPPYPKTPDMADFAAQFPYEPTPDQKQAFID 301
>ref|XP_006468934.1| PREDICTED: uncharacterized protein LOC102609921 [Citrus sinensis]
Length = 835
Score = 121 bits (304), Expect(3) = 2e-56
Identities = 60/74 (81%), Positives = 69/74 (93%)
Frame = +2
Query: 284 VLAKQHYDVVSERFSRYPNIMVGLLSRFQTKSKKEEYLHMIKRGDLDIIVGTHALLGNRV 463
VLAKQH+DVVSERFS YP+I VGLLSRFQ+K++KEE+L MIK G L+IIVGTH+LLG+RV
Sbjct: 342 VLAKQHFDVVSERFSMYPDIKVGLLSRFQSKAEKEEHLDMIKHGHLNIIVGTHSLLGSRV 401
Query: 464 VYNNLGLLVVDEEQ 505
VYNNLGLLVVDEEQ
Sbjct: 402 VYNNLGLLVVDEEQ 415
Score = 92.4 bits (228), Expect(3) = 2e-56
Identities = 44/56 (78%), Positives = 51/56 (91%)
Frame = +3
Query: 141 QAFMDVEKDLTERDNPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMFWQNSIMM 308
+AF+DVE+DLTER+ PMDRLICGDVGFGKTEVALRAIFCVVSAGKQAM +I++
Sbjct: 288 KAFIDVERDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVL 343
Score = 52.0 bits (123), Expect(3) = 2e-56
Identities = 24/36 (66%), Positives = 29/36 (80%)
Frame = +1
Query: 1 RLKQRRPLYLKTPAMADFASQFRYKPTPHQKKASED 108
RLKQ+RP Y K PA+A+FA+QF Y+PTP QKKA D
Sbjct: 257 RLKQKRPPYPKNPAIAEFAAQFPYEPTPDQKKAFID 292
>ref|XP_006844670.1| hypothetical protein AMTR_s00016p00242110 [Amborella trichopoda]
gi|548847141|gb|ERN06345.1| hypothetical protein
AMTR_s00016p00242110 [Amborella trichopoda]
Length = 887
Score = 127 bits (320), Expect(3) = 4e-56
Identities = 63/74 (85%), Positives = 70/74 (94%)
Frame = +2
Query: 284 VLAKQHYDVVSERFSRYPNIMVGLLSRFQTKSKKEEYLHMIKRGDLDIIVGTHALLGNRV 463
VLAKQH++V+SERFSRYP I VGLLSRFQTK++KEEY+ MIK+G LDIIVGTHALLGNRV
Sbjct: 394 VLAKQHFNVISERFSRYPEIKVGLLSRFQTKTEKEEYIAMIKQGLLDIIVGTHALLGNRV 453
Query: 464 VYNNLGLLVVDEEQ 505
VYNNLGLLVVDEEQ
Sbjct: 454 VYNNLGLLVVDEEQ 467
Score = 91.7 bits (226), Expect(3) = 4e-56
Identities = 44/56 (78%), Positives = 50/56 (89%)
Frame = +3
Query: 141 QAFMDVEKDLTERDNPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMFWQNSIMM 308
QAF+DVEKDLTER+ PMDRLICGDVGFGKTEVALRAIFCVV AGKQ+M +I++
Sbjct: 340 QAFIDVEKDLTERETPMDRLICGDVGFGKTEVALRAIFCVVLAGKQSMVLAPTIVL 395
Score = 45.8 bits (107), Expect(3) = 4e-56
Identities = 21/36 (58%), Positives = 27/36 (75%)
Frame = +1
Query: 1 RLKQRRPLYLKTPAMADFASQFRYKPTPHQKKASED 108
RLKQ+R Y K PA+++F SQF YKPTP Q++A D
Sbjct: 309 RLKQKRSPYPKNPAVSEFTSQFPYKPTPDQEQAFID 344
>ref|XP_004493106.1| PREDICTED: transcription-repair-coupling factor-like [Cicer
arietinum]
Length = 823
Score = 127 bits (320), Expect(3) = 4e-56
Identities = 63/74 (85%), Positives = 69/74 (93%)
Frame = +2
Query: 284 VLAKQHYDVVSERFSRYPNIMVGLLSRFQTKSKKEEYLHMIKRGDLDIIVGTHALLGNRV 463
VLAKQH+DV+SERFS YP+I VGLLSRFQT+S+KE YL MIK GDLDIIVGTH+LLGNRV
Sbjct: 330 VLAKQHFDVISERFSVYPDIKVGLLSRFQTRSEKEGYLEMIKSGDLDIIVGTHSLLGNRV 389
Query: 464 VYNNLGLLVVDEEQ 505
VYNNLGLLVVDEEQ
Sbjct: 390 VYNNLGLLVVDEEQ 403
Score = 88.6 bits (218), Expect(3) = 4e-56
Identities = 44/56 (78%), Positives = 49/56 (87%)
Frame = +3
Query: 141 QAFMDVEKDLTERDNPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMFWQNSIMM 308
QAF+DVEKDLTER+ PMDRLICGDVGFGKTEVALRAI CVVSA KQAM +I++
Sbjct: 276 QAFVDVEKDLTERETPMDRLICGDVGFGKTEVALRAIQCVVSAKKQAMVLAPTIVL 331
Score = 48.9 bits (115), Expect(3) = 4e-56
Identities = 23/36 (63%), Positives = 29/36 (80%)
Frame = +1
Query: 1 RLKQRRPLYLKTPAMADFASQFRYKPTPHQKKASED 108
RLKQRRP Y K+ A+A+FA+QF Y+PTP QK+A D
Sbjct: 245 RLKQRRPPYPKSHAVAEFAAQFLYQPTPDQKQAFVD 280
>gb|EMJ18845.1| hypothetical protein PRUPE_ppa001550mg [Prunus persica]
Length = 804
Score = 123 bits (308), Expect(3) = 5e-56
Identities = 60/74 (81%), Positives = 69/74 (93%)
Frame = +2
Query: 284 VLAKQHYDVVSERFSRYPNIMVGLLSRFQTKSKKEEYLHMIKRGDLDIIVGTHALLGNRV 463
VLAKQH+DV+S+RFS YPNI VGLLSRFQT+++KEE+L MIK G LDIIVGTH+LLG+RV
Sbjct: 311 VLAKQHFDVISDRFSVYPNIKVGLLSRFQTRAEKEEHLDMIKNGRLDIIVGTHSLLGSRV 370
Query: 464 VYNNLGLLVVDEEQ 505
VYNNLGLLVVDEEQ
Sbjct: 371 VYNNLGLLVVDEEQ 384
Score = 93.2 bits (230), Expect(3) = 5e-56
Identities = 45/56 (80%), Positives = 50/56 (89%)
Frame = +3
Query: 141 QAFMDVEKDLTERDNPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMFWQNSIMM 308
QAF+DV KDLTER+ PMDRLICGDVGFGKTEVALRAIFCVVSAGKQAM +I++
Sbjct: 257 QAFIDVHKDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVL 312
Score = 48.5 bits (114), Expect(3) = 5e-56
Identities = 24/36 (66%), Positives = 26/36 (72%)
Frame = +1
Query: 1 RLKQRRPLYLKTPAMADFASQFRYKPTPHQKKASED 108
RLKQRRP Y KT AM F SQF Y+PTP QK+A D
Sbjct: 226 RLKQRRPPYPKTNAMTHFVSQFPYEPTPDQKQAFID 261
>ref|XP_004306326.1| PREDICTED: transcription-repair-coupling factor-like [Fragaria
vesca subsp. vesca]
Length = 800
Score = 122 bits (307), Expect(3) = 5e-56
Identities = 60/74 (81%), Positives = 69/74 (93%)
Frame = +2
Query: 284 VLAKQHYDVVSERFSRYPNIMVGLLSRFQTKSKKEEYLHMIKRGDLDIIVGTHALLGNRV 463
VLAKQH++V+S+RFS YPNI VGLLSRFQTKS+K+E+L MIK G LDIIVGTH+LLG+RV
Sbjct: 307 VLAKQHFEVISQRFSIYPNINVGLLSRFQTKSEKDEHLDMIKNGHLDIIVGTHSLLGSRV 366
Query: 464 VYNNLGLLVVDEEQ 505
VYNNLGLLVVDEEQ
Sbjct: 367 VYNNLGLLVVDEEQ 380
Score = 91.3 bits (225), Expect(3) = 5e-56
Identities = 44/56 (78%), Positives = 50/56 (89%)
Frame = +3
Query: 141 QAFMDVEKDLTERDNPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMFWQNSIMM 308
QAF+DV+KDLT R+ PMDRLICGDVGFGKTEVALRAIFCVVSAGKQAM +I++
Sbjct: 253 QAFIDVDKDLTGRETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVL 308
Score = 50.8 bits (120), Expect(3) = 5e-56
Identities = 25/36 (69%), Positives = 27/36 (75%)
Frame = +1
Query: 1 RLKQRRPLYLKTPAMADFASQFRYKPTPHQKKASED 108
RLKQRRP Y TPAMA F SQF Y+PTP QK+A D
Sbjct: 222 RLKQRRPPYPLTPAMAHFVSQFPYEPTPDQKQAFID 257
>ref|XP_006408576.1| hypothetical protein EUTSA_v10020076mg [Eutrema salsugineum]
gi|567204573|ref|XP_006408577.1| hypothetical protein
EUTSA_v10020076mg [Eutrema salsugineum]
gi|557109722|gb|ESQ50029.1| hypothetical protein
EUTSA_v10020076mg [Eutrema salsugineum]
gi|557109723|gb|ESQ50030.1| hypothetical protein
EUTSA_v10020076mg [Eutrema salsugineum]
Length = 823
Score = 126 bits (317), Expect(3) = 8e-56
Identities = 62/74 (83%), Positives = 69/74 (93%)
Frame = +2
Query: 284 VLAKQHYDVVSERFSRYPNIMVGLLSRFQTKSKKEEYLHMIKRGDLDIIVGTHALLGNRV 463
VLAKQHYDV+SERFS YP I VGLLSRFQTK++KEEYL MIK GDL+IIVGTH+LLG+RV
Sbjct: 330 VLAKQHYDVISERFSLYPQIKVGLLSRFQTKAEKEEYLEMIKNGDLNIIVGTHSLLGSRV 389
Query: 464 VYNNLGLLVVDEEQ 505
VY+NLGLLVVDEEQ
Sbjct: 390 VYSNLGLLVVDEEQ 403
Score = 94.4 bits (233), Expect(3) = 8e-56
Identities = 45/56 (80%), Positives = 51/56 (91%)
Frame = +3
Query: 141 QAFMDVEKDLTERDNPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMFWQNSIMM 308
QAF+DV+KDLTER+ PMDRLICGDVGFGKTEVALRAIFCVVSAGKQAM +I++
Sbjct: 276 QAFLDVDKDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVL 331
Score = 43.1 bits (100), Expect(3) = 8e-56
Identities = 21/36 (58%), Positives = 25/36 (69%)
Frame = +1
Query: 1 RLKQRRPLYLKTPAMADFASQFRYKPTPHQKKASED 108
RL+Q+R Y K P MADFA+QF Y TP QK+A D
Sbjct: 245 RLRQKRYPYPKNPIMADFAAQFPYNATPDQKQAFLD 280
>dbj|BAJ34179.1| unnamed protein product [Thellungiella halophila]
Length = 823
Score = 126 bits (317), Expect(3) = 8e-56
Identities = 62/74 (83%), Positives = 69/74 (93%)
Frame = +2
Query: 284 VLAKQHYDVVSERFSRYPNIMVGLLSRFQTKSKKEEYLHMIKRGDLDIIVGTHALLGNRV 463
VLAKQHYDV+SERFS YP I VGLLSRFQTK++KEEYL MIK GDL+IIVGTH+LLG+RV
Sbjct: 330 VLAKQHYDVISERFSLYPQIKVGLLSRFQTKAEKEEYLEMIKNGDLNIIVGTHSLLGSRV 389
Query: 464 VYNNLGLLVVDEEQ 505
VY+NLGLLVVDEEQ
Sbjct: 390 VYSNLGLLVVDEEQ 403
Score = 94.4 bits (233), Expect(3) = 8e-56
Identities = 45/56 (80%), Positives = 51/56 (91%)
Frame = +3
Query: 141 QAFMDVEKDLTERDNPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMFWQNSIMM 308
QAF+DV+KDLTER+ PMDRLICGDVGFGKTEVALRAIFCVVSAGKQAM +I++
Sbjct: 276 QAFLDVDKDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVL 331
Score = 43.1 bits (100), Expect(3) = 8e-56
Identities = 21/36 (58%), Positives = 25/36 (69%)
Frame = +1
Query: 1 RLKQRRPLYLKTPAMADFASQFRYKPTPHQKKASED 108
RL+Q+R Y K P MADFA+QF Y TP QK+A D
Sbjct: 245 RLRQKRYPYPKNPIMADFAAQFPYNATPDQKQAFLD 280
>ref|XP_006408575.1| hypothetical protein EUTSA_v10020076mg [Eutrema salsugineum]
gi|557109721|gb|ESQ50028.1| hypothetical protein
EUTSA_v10020076mg [Eutrema salsugineum]
Length = 801
Score = 126 bits (317), Expect(3) = 8e-56
Identities = 62/74 (83%), Positives = 69/74 (93%)
Frame = +2
Query: 284 VLAKQHYDVVSERFSRYPNIMVGLLSRFQTKSKKEEYLHMIKRGDLDIIVGTHALLGNRV 463
VLAKQHYDV+SERFS YP I VGLLSRFQTK++KEEYL MIK GDL+IIVGTH+LLG+RV
Sbjct: 330 VLAKQHYDVISERFSLYPQIKVGLLSRFQTKAEKEEYLEMIKNGDLNIIVGTHSLLGSRV 389
Query: 464 VYNNLGLLVVDEEQ 505
VY+NLGLLVVDEEQ
Sbjct: 390 VYSNLGLLVVDEEQ 403
Score = 94.4 bits (233), Expect(3) = 8e-56
Identities = 45/56 (80%), Positives = 51/56 (91%)
Frame = +3
Query: 141 QAFMDVEKDLTERDNPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMFWQNSIMM 308
QAF+DV+KDLTER+ PMDRLICGDVGFGKTEVALRAIFCVVSAGKQAM +I++
Sbjct: 276 QAFLDVDKDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVL 331
Score = 43.1 bits (100), Expect(3) = 8e-56
Identities = 21/36 (58%), Positives = 25/36 (69%)
Frame = +1
Query: 1 RLKQRRPLYLKTPAMADFASQFRYKPTPHQKKASED 108
RL+Q+R Y K P MADFA+QF Y TP QK+A D
Sbjct: 245 RLRQKRYPYPKNPIMADFAAQFPYNATPDQKQAFLD 280
>gb|ESW33797.1| hypothetical protein PHAVU_001G099500g [Phaseolus vulgaris]
Length = 530
Score = 121 bits (303), Expect(3) = 8e-56
Identities = 60/74 (81%), Positives = 67/74 (90%)
Frame = +2
Query: 284 VLAKQHYDVVSERFSRYPNIMVGLLSRFQTKSKKEEYLHMIKRGDLDIIVGTHALLGNRV 463
VLAKQH+DV+SERFS YP+I VGLLSRFQTK++KEE L MIK G LDIIVGTH+LLG+RV
Sbjct: 329 VLAKQHFDVISERFSVYPDIKVGLLSRFQTKAEKEENLDMIKNGSLDIIVGTHSLLGDRV 388
Query: 464 VYNNLGLLVVDEEQ 505
YNNLGLLVVDEEQ
Sbjct: 389 TYNNLGLLVVDEEQ 402
Score = 88.6 bits (218), Expect(3) = 8e-56
Identities = 42/56 (75%), Positives = 50/56 (89%)
Frame = +3
Query: 141 QAFMDVEKDLTERDNPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMFWQNSIMM 308
QAF+DVE+DLTE++ PMDRLICGDVGFGKTEVA+RAIFCVVSA KQAM +I++
Sbjct: 275 QAFIDVERDLTEQETPMDRLICGDVGFGKTEVAIRAIFCVVSAKKQAMVLAPTIVL 330
Score = 54.3 bits (129), Expect(3) = 8e-56
Identities = 24/36 (66%), Positives = 30/36 (83%)
Frame = +1
Query: 1 RLKQRRPLYLKTPAMADFASQFRYKPTPHQKKASED 108
RLKQRRP YLKTPA+++F +QF Y+PTP QK+A D
Sbjct: 244 RLKQRRPAYLKTPALSEFEAQFPYEPTPDQKQAFID 279
>ref|XP_002512803.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223547814|gb|EEF49306.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 857
Score = 120 bits (300), Expect(3) = 2e-55
Identities = 58/74 (78%), Positives = 68/74 (91%)
Frame = +2
Query: 284 VLAKQHYDVVSERFSRYPNIMVGLLSRFQTKSKKEEYLHMIKRGDLDIIVGTHALLGNRV 463
VLAKQH++V+SERFS+Y NI VGLLSRFQT+S KE Y MIK+GDL+I+VGTH+LLG+RV
Sbjct: 332 VLAKQHFEVISERFSKYSNIKVGLLSRFQTQSVKEMYYEMIKQGDLNIVVGTHSLLGSRV 391
Query: 464 VYNNLGLLVVDEEQ 505
VYNNLGLLVVDEEQ
Sbjct: 392 VYNNLGLLVVDEEQ 405
Score = 94.0 bits (232), Expect(3) = 2e-55
Identities = 46/56 (82%), Positives = 50/56 (89%)
Frame = +3
Query: 141 QAFMDVEKDLTERDNPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMFWQNSIMM 308
QAF DVEKDLTER+ PMDRLICGDVGFGKTEVALRAIFCVVSAGKQAM +I++
Sbjct: 278 QAFNDVEKDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVL 333
Score = 48.5 bits (114), Expect(3) = 2e-55
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 RLKQRRPLYLKTPAMADFASQFRYKPTPHQKKASED 108
RLKQRRP Y K+P MA+F +QF Y+PTP Q +A D
Sbjct: 247 RLKQRRPPYPKSPVMAEFTAQFPYEPTPDQFQAFND 282
>ref|XP_003624531.1| Transcription-repair-coupling factor [Medicago truncatula]
gi|355499546|gb|AES80749.1|
Transcription-repair-coupling factor [Medicago
truncatula]
Length = 503
Score = 128 bits (322), Expect(3) = 2e-55
Identities = 63/74 (85%), Positives = 69/74 (93%)
Frame = +2
Query: 284 VLAKQHYDVVSERFSRYPNIMVGLLSRFQTKSKKEEYLHMIKRGDLDIIVGTHALLGNRV 463
VLAKQH+DV+SERFS YP+I VGLLSRFQT+S+KE YL MIK GDLDIIVGTH+LLGNRV
Sbjct: 147 VLAKQHFDVISERFSVYPDIKVGLLSRFQTRSEKEAYLEMIKNGDLDIIVGTHSLLGNRV 206
Query: 464 VYNNLGLLVVDEEQ 505
VYNNLGLLVVDEEQ
Sbjct: 207 VYNNLGLLVVDEEQ 220
Score = 87.4 bits (215), Expect(3) = 2e-55
Identities = 42/56 (75%), Positives = 49/56 (87%)
Frame = +3
Query: 141 QAFMDVEKDLTERDNPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMFWQNSIMM 308
QAF+DVEKDLTER+ PMDRLICGDVGFGKTEVA+RAI CVV+A KQAM +I++
Sbjct: 93 QAFIDVEKDLTERETPMDRLICGDVGFGKTEVAMRAIHCVVAAKKQAMVLAPTIVL 148
Score = 46.6 bits (109), Expect(3) = 2e-55
Identities = 21/36 (58%), Positives = 28/36 (77%)
Frame = +1
Query: 1 RLKQRRPLYLKTPAMADFASQFRYKPTPHQKKASED 108
RLKQRRP Y +P +A+FA++F Y+PTP QK+A D
Sbjct: 62 RLKQRRPPYPMSPVVAEFAAKFPYEPTPDQKQAFID 97
>gb|ABD33152.1| Helicase, C-terminal; Haem peroxidase, plant/fungal/bacterial
[Medicago truncatula]
Length = 494
Score = 128 bits (322), Expect(3) = 2e-55
Identities = 63/74 (85%), Positives = 69/74 (93%)
Frame = +2
Query: 284 VLAKQHYDVVSERFSRYPNIMVGLLSRFQTKSKKEEYLHMIKRGDLDIIVGTHALLGNRV 463
VLAKQH+DV+SERFS YP+I VGLLSRFQT+S+KE YL MIK GDLDIIVGTH+LLGNRV
Sbjct: 163 VLAKQHFDVISERFSVYPDIKVGLLSRFQTRSEKEAYLEMIKNGDLDIIVGTHSLLGNRV 222
Query: 464 VYNNLGLLVVDEEQ 505
VYNNLGLLVVDEEQ
Sbjct: 223 VYNNLGLLVVDEEQ 236
Score = 87.4 bits (215), Expect(3) = 2e-55
Identities = 42/56 (75%), Positives = 49/56 (87%)
Frame = +3
Query: 141 QAFMDVEKDLTERDNPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMFWQNSIMM 308
QAF+DVEKDLTER+ PMDRLICGDVGFGKTEVA+RAI CVV+A KQAM +I++
Sbjct: 109 QAFIDVEKDLTERETPMDRLICGDVGFGKTEVAMRAIHCVVAAKKQAMVLAPTIVL 164
Score = 46.6 bits (109), Expect(3) = 2e-55
Identities = 21/36 (58%), Positives = 28/36 (77%)
Frame = +1
Query: 1 RLKQRRPLYLKTPAMADFASQFRYKPTPHQKKASED 108
RLKQRRP Y +P +A+FA++F Y+PTP QK+A D
Sbjct: 78 RLKQRRPPYPMSPVVAEFAAKFPYEPTPDQKQAFID 113
>ref|XP_002884246.1| hypothetical protein ARALYDRAFT_477305 [Arabidopsis lyrata subsp.
lyrata] gi|297330086|gb|EFH60505.1| hypothetical protein
ARALYDRAFT_477305 [Arabidopsis lyrata subsp. lyrata]
Length = 823
Score = 123 bits (308), Expect(3) = 4e-55
Identities = 61/74 (82%), Positives = 68/74 (91%)
Frame = +2
Query: 284 VLAKQHYDVVSERFSRYPNIMVGLLSRFQTKSKKEEYLHMIKRGDLDIIVGTHALLGNRV 463
VLAKQHYDV+SERFS YP I VGLLSRFQTK++KEEYL MIK G L+IIVGTH+LLG+RV
Sbjct: 330 VLAKQHYDVISERFSLYPQIKVGLLSRFQTKAEKEEYLEMIKDGHLNIIVGTHSLLGSRV 389
Query: 464 VYNNLGLLVVDEEQ 505
VY+NLGLLVVDEEQ
Sbjct: 390 VYSNLGLLVVDEEQ 403
Score = 95.5 bits (236), Expect(3) = 4e-55
Identities = 46/56 (82%), Positives = 51/56 (91%)
Frame = +3
Query: 141 QAFMDVEKDLTERDNPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMFWQNSIMM 308
QAF+DVEKDLTER+ PMDRLICGDVGFGKTEVALRAIFCVVSAGKQAM +I++
Sbjct: 276 QAFLDVEKDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVL 331
Score = 43.1 bits (100), Expect(3) = 4e-55
Identities = 21/36 (58%), Positives = 25/36 (69%)
Frame = +1
Query: 1 RLKQRRPLYLKTPAMADFASQFRYKPTPHQKKASED 108
RL+Q+R Y K P MADFA+QF Y TP QK+A D
Sbjct: 245 RLRQKRYPYPKNPIMADFAAQFPYNATPDQKQAFLD 280