BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00017959
         (2933 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006490008.1| PREDICTED: uncharacterized protein LOC102624...   114   3e-95
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ...   117   8e-84
gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas...    95   3e-76
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...   111   4e-75
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...   115   6e-75
gb|AAD37021.1| putative non-LTR retrolelement reverse transcript...    97   2e-69
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]             105   4e-67
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]             105   7e-67
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]             105   6e-66
gb|EOY02376.1| LINE-type retrotransposon LIb DNA, Insertion at t...   111   7e-59
gb|EMJ28511.1| hypothetical protein PRUPE_ppa016553mg [Prunus pe...    93   6e-57
gb|EMJ27906.1| hypothetical protein PRUPE_ppa020120mg [Prunus pe...    87   8e-54
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...    92   9e-54
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...    84   9e-53
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    83   1e-52
gb|EEC84753.1| hypothetical protein OsI_31756 [Oryza sativa Indi...    87   1e-50
gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group...    79   1e-50
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ...    76   3e-50
gb|AAP54617.2| retrotransposon protein, putative, unclassified [...    76   3e-50
gb|ABA96650.1| retrotransposon protein, putative, unclassified [...    80   3e-50

>ref|XP_006490008.1| PREDICTED: uncharacterized protein LOC102624085 [Citrus sinensis]
          Length = 1635

 Score =  114 bits (284), Expect(6) = 3e-95
 Identities = 56/126 (44%), Positives = 79/126 (62%)
 Frame = +2

Query: 1304 LCLEVLGHQILQHVGTGDWKPIRLSRSGPPLTYLFFVDHLFLFSEASEQHAMIMEDILRQ 1483
            LC+E L H I + +  G WKPIRL+R G PL++LFF D L   SEAS Q A+I+  I+ +
Sbjct: 1142 LCIERLSHGISRSIQQGHWKPIRLARMGTPLSHLFFADDLLFLSEASSQQAIIINKIIDE 1201

Query: 1484 FCSWSGQKINMGESKLFVSCNTSTAVAMAISSKWGIPFTDDLGKYLGVPMLNGCVTNHTY 1663
            F + SG K+N  ++ ++ S N S   A  I S  G   TD+LGKYLGVP+ +  ++  TY
Sbjct: 1202 FSASSGAKVNKSKTLVYFSANISAMEASRIGSDLGYSVTDNLGKYLGVPLCHSRISKQTY 1261

Query: 1664 KEVVVK 1681
            + +V K
Sbjct: 1262 QSIVDK 1267



 Score =  103 bits (257), Expect(6) = 3e-95
 Identities = 50/107 (46%), Positives = 72/107 (67%)
 Frame = +3

Query: 981  LKPLITKLIEEQQSSFVPGKHGVDNIVLVQAIIHSMRIKKGQKGWMAVK*DLEKAYDRIE 1160
            L+ L+ +LI   Q+SFVPG+H  +NI++ Q IIHSMR KKG+KG+MA+K DL KAYDR+ 
Sbjct: 1022 LQELLPELIGPHQTSFVPGRHITENIIVAQEIIHSMRRKKGRKGFMAIKVDLGKAYDRLS 1081

Query: 1161 WNFLCNVHRIVGFKDRLLEFILFCISSTSLSVL*NGERLDSFTPSRG 1301
            W F+    + +     L+  I+ CI++ +++VL NGE    F P RG
Sbjct: 1082 WTFIQETLQELNLPTMLINLIMECITTATMNVLWNGELSSEFCPGRG 1128



 Score = 85.1 bits (209), Expect(6) = 3e-95
 Identities = 41/105 (39%), Positives = 58/105 (55%)
 Frame = +1

Query: 664  FRYYLLN*EVCDEEIEIATFHMGTNKAPGSDNLPPFFFQKNWHIVGSITCKFVRATFTNG 843
            +R   L  E+ +EEI  A F+M   KAPG D L   F+Q  WHIVG   CK ++  F   
Sbjct: 916  YRLKFLATEIEEEEIRHAVFNMSPLKAPGVDGLHAIFYQSQWHIVGESFCKAIKEVFQTQ 975

Query: 844  YFSPNMNEMIITLIPELDHPEKISQFRPISFYNMVAKYITKIVTN 978
                 +N  ++ LIP+++ P   S +RPIS   ++ K ITKI+ N
Sbjct: 976  CLPAEVNRTVLVLIPKIEQPTSFSMYRPISLCTVMYKTITKIIAN 1020



 Score = 67.8 bits (164), Expect(6) = 3e-95
 Identities = 57/198 (28%), Positives = 80/198 (40%), Gaps = 22/198 (11%)
 Frame = +3

Query: 1776 YAMQTAKIPCSILDELEQINRDFLGR*GRF*EDTCHFSWDVICKSTEAGRLGIKKMREMN 1955
            YAMQT K+P SI  +++Q+ R F+       +     +WD+IC     G LG KK+  MN
Sbjct: 1299 YAMQTTKLPRSIKMKIDQLCRRFIWSGSAEHQKMSLVNWDMICTPKCKGGLGFKKLDIMN 1358

Query: 1956 QVFLAKLGWRMLKQPYQLWAQVLWRKCGSPLVDIPNGQKYFTCLEEHKA*GS---*IS*G 2126
               L K  WR++ +P +L  QVL  K G  L + P            KA GS       G
Sbjct: 1359 HALLMKNTWRLITEPTKLSNQVLLTKYGVHLDEFPTSLPTRYGSHLWKAMGSTWEQTRVG 1418

Query: 2127 VVWT-------------------DSVHALDAMVDPGRIRWGVTRHGDFTTKLAYAKLNSA 2249
            + W                     SVH   A        WG + +G+F+ K AY  L+  
Sbjct: 1419 MCWNIGDGKRVRYLLPNNILLKIASVHPPTASHGADSFFWGASSNGNFSVKSAYELLDDP 1478

Query: 2250 APEDVEEG*DEIWQLRGP 2303
                       +W  +GP
Sbjct: 1479 IGNGDHSFWCLVWSWKGP 1496



 Score = 52.0 bits (123), Expect(6) = 3e-95
 Identities = 27/82 (32%), Positives = 42/82 (51%)
 Frame = +1

Query: 4   WFLLG*HSVYPETEVRHLPRIKSDHHPLLVKCIVK*TMPAKEKPFLFLTAWLHNSEFESF 183
           WFL       P   V HLP++ SDH P+L++           K F F+ AWL +S F  F
Sbjct: 698 WFLQN-----PNASVLHLPKVASDHRPVLIRFDQNSRNNNFPKLFRFMAAWLTDSRFADF 752

Query: 184 LCNMWQSFGTDFSCTIAEFVEK 249
           +   WQ+ G  +   ++EF+++
Sbjct: 753 MKTHWQN-GVPYDRAVSEFIQQ 773



 Score = 40.4 bits (93), Expect(6) = 3e-95
 Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
 Frame = +2

Query: 290  KKRC*AQINGVQKRLAIGGSPLGEPGE---QLASEYSAILE*EELFWWQKSRAKWWVEGE 460
            KK   A+I GVQ+  A+   PL        +L  E   +L  EEL W Q+SR  W + G+
Sbjct: 789  KKILLARIGGVQR--ALERRPLCSLYRLEIKLKKELEEVLMQEELLWLQRSRRDWILFGD 846

Query: 461  NNDWYFHLYAKVMRRNSKVLLLQNDHGVSVDDRDMLRSIA 580
             N  YFH      R ++++  +  + G    D + ++  A
Sbjct: 847  RNTAYFHQKTITRRHHNRIDAIMAEDGRWFYDMEAIKQQA 886


>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
            gi|7268307|emb|CAB78601.1| reverse transcriptase like
            protein [Arabidopsis thaliana]
          Length = 929

 Score =  117 bits (294), Expect(6) = 8e-84
 Identities = 56/107 (52%), Positives = 75/107 (70%)
 Frame = +3

Query: 981  LKPLITKLIEEQQSSFVPGKHGVDNIVLVQAIIHSMRIKKGQKGWMAVK*DLEKAYDRIE 1160
            LK +I+KLI   Q+SF+PG+   DNIV+VQ  +HSMR KKG+KGWM +K DLEKAYDRI 
Sbjct: 341  LKNVISKLIGPAQASFIPGRLSFDNIVVVQEAVHSMRRKKGRKGWMLLKLDLEKAYDRIR 400

Query: 1161 WNFLCNVHRIVGFKDRLLEFILFCISSTSLSVL*NGERLDSFTPSRG 1301
            W+FL       G  +  ++ I+ C++   +S+L NGE+ DSFTP RG
Sbjct: 401  WDFLAETLEAAGLSEGWIKRIMECVAGPEMSLLWNGEKTDSFTPERG 447



 Score = 84.7 bits (208), Expect(6) = 8e-84
 Identities = 48/124 (38%), Positives = 71/124 (57%)
 Frame = +2

Query: 1304 LCLEVLGHQILQHVGTGDWKPIRLSRSGPPLTYLFFVDHLFLFSEASEQHAMIMEDILRQ 1483
            LC+E L HQI   VG GDWK I +S+ GP ++++ F D L LF+EAS             
Sbjct: 461  LCIERLCHQIETAVGRGDWKSISISQGGPKVSHVCFADDLILFAEAS------------- 507

Query: 1484 FCSWSGQKINMGESKLFVSCNTSTAVAMAISSKWGIPFTDDLGKYLGVPMLNGCVTNHTY 1663
                  QK+++ +SK+F S N S  +   I+++ GI  T +LGKYLG+P+L   +   T+
Sbjct: 508  ----VAQKVSLEKSKIFFSNNVSRDLEGLITAETGIGSTRELGKYLGMPVLQKRINKDTF 563

Query: 1664 KEVV 1675
             EV+
Sbjct: 564  GEVL 567



 Score = 77.4 bits (189), Expect(6) = 8e-84
 Identities = 37/98 (37%), Positives = 58/98 (59%)
 Frame = +1

Query: 679 LN*EVCDEEIEIATFHMGTNKAPGSDNLPPFFFQKNWHIVGSITCKFVRATFTNGYFSPN 858
           LN     +E+ +A   MG  KAPG D   P F+Q+ W  VG    KFV   F +G    +
Sbjct: 240 LNRPFTRDEVVVAVRSMGRFKAPGPDGYQPVFYQQCWETVGESVSKFVMEFFESGVLPKS 299

Query: 859 MNEMIITLIPELDHPEKISQFRPISFYNMVAKYITKIV 972
            N++++ L+ ++  PE+I+QFRP+S  N++ K ITK++
Sbjct: 300 TNDVLLVLLAKVAKPERITQFRPVSLCNVLFKIITKMM 337



 Score = 70.5 bits (171), Expect(6) = 8e-84
 Identities = 32/90 (35%), Positives = 55/90 (61%)
 Frame = +3

Query: 1764 TLPFYAMQTAKIPCSILDELEQINRDFLGR*GRF*EDTCHFSWDVICKSTEAGRLGIKKM 1943
            ++P + M +  +P S+L++L++++R+FL             SW  +C+   AG LG++  
Sbjct: 597  SIPIHTMSSILLPASLLEQLDKVSRNFLWGSTVEKRKQHLLSWKKVCRPKAAGGLGLRAS 656

Query: 1944 REMNQVFLAKLGWRMLKQPYQLWAQVLWRK 2033
            ++MN+  LAK+GWR+L     LWA+VL RK
Sbjct: 657  KDMNRALLAKVGWRLLNDKVSLWARVLRRK 686



 Score = 46.6 bits (109), Expect(6) = 8e-84
 Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
 Frame = +2

Query: 242 WRNQSFRKEIYP-Y*T*KKRC*AQINGVQKRL-AIGGSPLGEPGEQLASEYSAILE*EEL 415
           W+ + + KE++      K++  + +  VQ  L  +    L    + L  E+  +L  EE 
Sbjct: 90  WQLKKWNKEVFGNIHVRKEKVVSDLKAVQDLLEVVQTDDLLMKEDTLLKEFDVLLHQEET 149

Query: 416 FWWQKSRAKWWVEGENNDWYFHLYAKVMRRNSKVLLLQNDHGVSVDDRDMLRSIA 580
            W+QKSR K    G+ N  +FH    + RR +++ +L++     V +++ L  +A
Sbjct: 150 LWFQKSREKLLALGDRNTTFFHTSTVIRRRRNRIEMLKDSEDRWVTEKEALEKLA 204



 Score = 26.9 bits (58), Expect(6) = 8e-84
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 121 AKEKPFLFLTAWLHNSEFESFLCNMWQS 204
           A+ +PF F  AWL +  F+  L   W +
Sbjct: 50  ARRRPFRFEAAWLSHEGFKELLTASWDT 77


>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
            [Medicago truncatula]
          Length = 1296

 Score = 95.1 bits (235), Expect(6) = 3e-76
 Identities = 44/107 (41%), Positives = 70/107 (65%)
 Frame = +3

Query: 981  LKPLITKLIEEQQSSFVPGKHGVDNIVLVQAIIHSMRIKKGQKGWMAVK*DLEKAYDRIE 1160
            L+P +  LI   QSSF+PG+   DN +++Q I+H M+  K +KG++A K DLEKA+D + 
Sbjct: 528  LRPFLNNLIGPYQSSFLPGRGTADNSIILQEILHFMKRSKRKKGYVAFKLDLEKAFDNVN 587

Query: 1161 WNFLCNVHRIVGFKDRLLEFILFCISSTSLSVL*NGERLDSFTPSRG 1301
            W+FL +     GF D +++ I+ C+SS + S+L NG ++  F P+ G
Sbjct: 588  WDFLNSCLLDFGFPDIIVKLIMHCVSSANYSLLWNGNKMPPFKPTHG 634



 Score = 77.8 bits (190), Expect(6) = 3e-76
 Identities = 40/113 (35%), Positives = 60/113 (53%)
 Frame = +2

Query: 1304 LCLEVLGHQILQHVGTGDWKPIRLSRSGPPLTYLFFVDHLFLFSEASEQHAMIMEDILRQ 1483
            LC+E L   I   V  G W+PI +   GP +++L F D + LF++A       + ++  +
Sbjct: 648  LCMEKLSVAIQDAVLQGSWEPIHIINDGPQISHLLFADDVLLFTKAKSSQLQFITNLFDR 707

Query: 1484 FCSWSGQKINMGESKLFVSCNTSTAVAMAISSKWGIPFTDDLGKYLGVPMLNG 1642
            F   SG KIN+ +S+ + S  T       +++  GI  T  LGKYLG PML G
Sbjct: 708  FSRASGLKINISKSRAYYSSGTPNGKINNLTAISGIQSTTTLGKYLGFPMLQG 760



 Score = 76.3 bits (186), Expect(6) = 3e-76
 Identities = 37/96 (38%), Positives = 53/96 (55%)
 Frame = +1

Query: 691 VCDEEIEIATFHMGTNKAPGSDNLPPFFFQKNWHIVGSITCKFVRATFTNGYFSPNMNEM 870
           +  +E+  A   M   KAPG D     FF++ WHIVG      VR+ F  G+F P ++  
Sbjct: 431 ITKKEVFAALNSMKPYKAPGPDGFHCIFFKQYWHIVGDDVFHLVRSAFLTGHFDPAISNT 490

Query: 871 IITLIPELDHPEKISQFRPISFYNMVAKYITKIVTN 978
           +I LIP++D P     FRPIS  N + K ITK++ +
Sbjct: 491 LIALIPKIDSPNTYKDFRPISLCNTLYKIITKVLVH 526



 Score = 55.1 bits (131), Expect(6) = 3e-76
 Identities = 27/78 (34%), Positives = 46/78 (58%)
 Frame = +2

Query: 368 EQLASEYSAILE*EELFWWQKSRAKWWVEGENNDWYFHLYAKVMRRNSKVLLLQNDHGVS 547
           ++L  EY+ IL  EE+ W+QKSR +W   G+ N  +FH    + R+ +K+  LQ  +G+S
Sbjct: 322 KELQDEYNHILFQEEMLWYQKSREQWVKLGDKNTAFFHAQTVIRRKWNKIHKLQLPNGIS 381

Query: 548 VDDRDMLRSIAPRLICEF 601
             D ++L+  A +   +F
Sbjct: 382 TSDSNILQEEALKYFKKF 399



 Score = 53.9 bits (128), Expect(6) = 3e-76
 Identities = 31/94 (32%), Positives = 49/94 (52%)
 Frame = +3

Query: 1761 ATLPFYAMQTAKIPCSILDELEQINRDFLGR*GRF*EDTCHFSWDVICKSTEAGRLGIKK 1940
            +T+P Y MQ   +P +I D ++Q  R+FL + G   +     +W  I +    G LGI+ 
Sbjct: 800  STIPTYYMQINWLPQNICDSIDQTARNFLWK-GSNNKGIHLVNWKTITRPKSIGGLGIRS 858

Query: 1941 MREMNQVFLAKLGWRMLKQPYQLWAQVLWRKCGS 2042
             R+ N   L KL W M++   +LW  +L +K  S
Sbjct: 859  ARDANICLLGKLVWDMVQSTNKLWVNLLAKKYSS 892



 Score = 40.0 bits (92), Expect(6) = 3e-76
 Identities = 21/81 (25%), Positives = 43/81 (53%)
 Frame = +1

Query: 31  YPETEVRHLPRIKSDHHPLLVKCIVK*TMPAKEKPFLFLTAWLHNSEFESFLCNMWQSFG 210
           +PE  V  L R+ SDH+PLL++      +    +PF F  AW+ + ++ + +   W +  
Sbjct: 208 FPEAFVEVLCRLHSDHNPLLLR-FGGLPLTRGPRPFRFEAAWIDHYDYGNVVKRSWSTHT 266

Query: 211 TDFSCTIAEFVEKSVI*KRDI 273
            + + ++ + +E S+I   D+
Sbjct: 267 HNPTASLIKVMENSIIFNHDV 287


>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score =  111 bits (278), Expect(4) = 4e-75
 Identities = 54/124 (43%), Positives = 78/124 (62%)
 Frame = +2

Query: 1304 LCLEVLGHQILQHVGTGDWKPIRLSRSGPPLTYLFFVDHLFLFSEASEQHAMIMEDILRQ 1483
            +C+E L H I Q V  G+WKP++ SR+GPP++ L F D L LFSEAS + A +M+  L +
Sbjct: 652  ICMERLAHLIDQEVTNGNWKPVKASRNGPPISNLAFADDLILFSEASVEQAQVMKWCLDR 711

Query: 1484 FCSWSGQKINMGESKLFVSCNTSTAVAMAISSKWGIPFTDDLGKYLGVPMLNGCVTNHTY 1663
            FC  SG K+N  +SK++ S NT   +  A+ +   +  T D GKYLGVP +NG  +   Y
Sbjct: 712  FCEASGSKVNEDKSKIYFSANTHLDIRDAVCNTLAMEATADFGKYLGVPTINGRSSKREY 771

Query: 1664 KEVV 1675
            + +V
Sbjct: 772  QYLV 775



 Score =  102 bits (254), Expect(4) = 4e-75
 Identities = 47/107 (43%), Positives = 70/107 (65%)
 Frame = +3

Query: 981  LKPLITKLIEEQQSSFVPGKHGVDNIVLVQAIIHSMRIKKGQKGWMAVK*DLEKAYDRIE 1160
            LKP++  LI   Q SFVP +   DN+++VQ + HSMR K+G+KG+MAVK D EKAYDR+ 
Sbjct: 532  LKPILPSLISPTQCSFVPNRQITDNVIIVQEMFHSMRNKQGKKGFMAVKIDFEKAYDRLR 591

Query: 1161 WNFLCNVHRIVGFKDRLLEFILFCISSTSLSVL*NGERLDSFTPSRG 1301
            W F+      +     L++ ++ C+SS +L +L NGE ++   P+RG
Sbjct: 592  WTFIRESLMELRIPQHLVDIVMNCVSSANLQILWNGEPMEKICPTRG 638



 Score = 74.7 bits (182), Expect(4) = 4e-75
 Identities = 35/91 (38%), Positives = 56/91 (61%)
 Frame = +3

Query: 1761 ATLPFYAMQTAKIPCSILDELEQINRDFLGR*GRF*EDTCHFSWDVICKSTEAGRLGIKK 1940
            +++P+Y MQ+ K+P S  D++++ +R FL             +W+ I KS + G LGI+ 
Sbjct: 804  SSIPYYTMQSTKLPRSTCDDIDRKSRSFLWGEQEGKRRVHLVAWENISKSKKEGGLGIRS 863

Query: 1941 MREMNQVFLAKLGWRMLKQPYQLWAQVLWRK 2033
            MR+ N  FL KLGWR+L +P  LW+++L  K
Sbjct: 864  MRQANSAFLVKLGWRLLAEPSSLWSRILRAK 894



 Score = 65.1 bits (157), Expect(4) = 4e-75
 Identities = 32/92 (34%), Positives = 46/92 (50%)
 Frame = +1

Query: 703 EIEIATFHMGTNKAPGSDNLPPFFFQKNWHIVGSITCKFVRATFTNGYFSPNMNEMIITL 882
           E+ +A   M   KAPG D   P F+Q+ W +V       V    +   F    N+  I L
Sbjct: 439 EVTLALKSMKPFKAPGPDGFQPLFYQRFWDLVKPNVMHLVSEILSGRDFPEGFNDTFIVL 498

Query: 883 IPELDHPEKISQFRPISFYNMVAKYITKIVTN 978
           IP++D P+    FRPI   N+V K +TK++ N
Sbjct: 499 IPKMDIPQLAKHFRPIGLCNIVYKIVTKVIIN 530



 Score = 52.4 bits (124), Expect(2) = 2e-10
 Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
 Frame = +2

Query: 248 NQSFRKEIYPY*T*KKRC*AQINGVQKRLAIGG-SPLGEPGEQLASEYSAILE*EELFWW 424
           N+  ++E Y     K    A+I+GVQ  L+ G  + L +   +L  E   +L+ EE  W+
Sbjct: 284 NKWNKEEFYNIFRKKSELWARISGVQALLSTGRQNHLIKLEAKLRREMDIVLDDEETLWF 343

Query: 425 QKSRAKWWVEGENNDWYFHLYAKVMRRNSKVLLLQNDHG 541
           QKSR +   +G+ N  YFHL   + R  +++ +LQN+ G
Sbjct: 344 QKSRMEAICDGDRNTRYFHLSTVIRRSRNRIDMLQNNDG 382



 Score = 42.4 bits (98), Expect(2) = 2e-10
 Identities = 21/58 (36%), Positives = 32/58 (55%)
 Frame = +1

Query: 31  YPETEVRHLPRIKSDHHPLLVKCIVK*TMPAKEKPFLFLTAWLHNSEFESFLCNMWQS 204
           + E  VR+LP+ +SDH P+L+       +P   KPF F  AWL++  F  F+   W +
Sbjct: 211 FTEGVVRNLPKSQSDHCPILISTSGFAPVPRIIKPFRFQAAWLNHQVFCEFVRKNWNA 268


>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1231

 Score =  115 bits (288), Expect(4) = 6e-75
 Identities = 57/107 (53%), Positives = 74/107 (69%)
 Frame = +3

Query: 981  LKPLITKLIEEQQSSFVPGKHGVDNIVLVQAIIHSMRIKKGQKGWMAVK*DLEKAYDRIE 1160
            LK +I+KLI   Q+SF+PG+  +DNIVLVQ  +HSMR KKG+KGWM +K DLEKAYDR+ 
Sbjct: 389  LKNVISKLIGPAQASFIPGRLSIDNIVLVQEAVHSMRRKKGRKGWMLLKLDLEKAYDRVR 448

Query: 1161 WNFLCNVHRIVGFKDRLLEFILFCISSTSLSVL*NGERLDSFTPSRG 1301
            W+FL       G  +     I+  ++  S+SVL NGER DSF P+RG
Sbjct: 449  WDFLQETLEAAGLSEGWTSRIMAGVTDPSMSVLWNGERTDSFVPARG 495



 Score =  102 bits (253), Expect(4) = 6e-75
 Identities = 54/124 (43%), Positives = 76/124 (61%)
 Frame = +2

Query: 1304 LCLEVLGHQILQHVGTGDWKPIRLSRSGPPLTYLFFVDHLFLFSEASEQHAMIMEDILRQ 1483
            LCLE L H I   VG  +WKPI +S  G  L+++ F D L LF+EAS     I+  +L +
Sbjct: 509  LCLERLCHLIEASVGKREWKPIAVSCGGSKLSHVCFADDLILFAEASVAQIRIIRRVLER 568

Query: 1484 FCSWSGQKINMGESKLFVSCNTSTAVAMAISSKWGIPFTDDLGKYLGVPMLNGCVTNHTY 1663
            FC  SGQK+++ +SK+F S N S  +   IS + GI  T +LGKYLG+P+L   +   T+
Sbjct: 569  FCEASGQKVSLEKSKIFFSHNVSREMEQLISEESGIGCTKELGKYLGMPILQKRMNKETF 628

Query: 1664 KEVV 1675
             EV+
Sbjct: 629  GEVL 632



 Score = 71.6 bits (174), Expect(4) = 6e-75
 Identities = 35/90 (38%), Positives = 51/90 (56%)
 Frame = +1

Query: 703 EIEIATFHMGTNKAPGSDNLPPFFFQKNWHIVGSITCKFVRATFTNGYFSPNMNEMIITL 882
           E+  A   MG  KAPG D   P F+Q+ W  VG    +FV   F  G    + N+ ++ L
Sbjct: 296 EVVSAVKSMGRFKAPGPDGYQPVFYQQCWETVGPSVTRFVLEFFETGVLPASTNDALLVL 355

Query: 883 IPELDHPEKISQFRPISFYNMVAKYITKIV 972
           I ++  PE+I QFRP+S  N++ K ITK++
Sbjct: 356 IAKVAKPERIQQFRPVSLCNVLFKIITKMM 385



 Score = 64.3 bits (155), Expect(4) = 6e-75
 Identities = 31/91 (34%), Positives = 52/91 (57%)
 Frame = +3

Query: 1761 ATLPFYAMQTAKIPCSILDELEQINRDFLGR*GRF*EDTCHFSWDVICKSTEAGRLGIKK 1940
            +++P + M    +P S LD L++ +R FL       +     SW  ICK    G +G++ 
Sbjct: 661  SSIPVHVMSAILLPVSTLDTLDRYSRTFLWGSTMEKKKQHLLSWRKICKPKAEGGIGLRS 720

Query: 1941 MREMNQVFLAKLGWRMLKQPYQLWAQVLWRK 2033
             R+MN+  +AK+GWR+L+    LWA+V+ +K
Sbjct: 721  ARDMNKALVAKVGWRLLQDKESLWARVVRKK 751


>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 732

 Score = 97.4 bits (241), Expect(4) = 2e-69
 Identities = 47/95 (49%), Positives = 67/95 (70%)
 Frame = +3

Query: 981  LKPLITKLIEEQQSSFVPGKHGVDNIVLVQAIIHSMRIKKGQKGWMAVK*DLEKAYDRIE 1160
            LK +I+KLI   Q+SF+ G+   DNIV++Q  +HSMR KKG+KGWM +K DLEKAYDRI 
Sbjct: 86   LKRVISKLIRPAQASFISGRLAADNIVIMQEAVHSMRRKKGRKGWMLLKLDLEKAYDRIR 145

Query: 1161 WNFLCNVHRIVGFKDRLLEFILFCISSTSLSVL*N 1265
            W FL +  R V   ++ + +I+ C++  S+S+L N
Sbjct: 146  WEFLEDTLRAVRLPEKWIVWIMQCVTEPSMSLLWN 180



 Score = 95.5 bits (236), Expect(4) = 2e-69
 Identities = 46/109 (42%), Positives = 70/109 (64%)
 Frame = +2

Query: 1355 DWKPIRLSRSGPPLTYLFFVDHLFLFSEASEQHAMIMEDILRQFCSWSGQKINMGESKLF 1534
            DWKPI LS+ GP L+++ F D L LF+EAS     ++  +L +FC  SGQK+++ +SK+F
Sbjct: 188  DWKPISLSQGGPKLSHICFADDLILFAEASVAQIRVIRRVLERFCVASGQKVSLEKSKIF 247

Query: 1535 VSCNTSTAVAMAISSKWGIPFTDDLGKYLGVPMLNGCVTNHTYKEVVVK 1681
             S N S  +   IS + GI  T +LGKYLG+P+L   +   T+ +++ K
Sbjct: 248  FSENVSRDLGKLISDESGISSTRELGKYLGMPVLQRRINKDTFGDILEK 296



 Score = 71.6 bits (174), Expect(4) = 2e-69
 Identities = 36/80 (45%), Positives = 47/80 (58%)
 Frame = +1

Query: 727 MGTNKAPGSDNLPPFFFQKNWHIVGSITCKFVRATFTNGYFSPNMNEMIITLIPELDHPE 906
           MG  KAPG D   P F+Q  W IVG    +FV   F +G      N+ I+ LI ++  PE
Sbjct: 1   MGKYKAPGPDGFQPVFYQDCWDIVGDSVSRFVLDFFASGKLPEGTNDAIVVLIAKVLKPE 60

Query: 907 KISQFRPISFYNMVAKYITK 966
           +I+QFRPIS  N++ K ITK
Sbjct: 61  RITQFRPISLCNVLFKTITK 80



 Score = 70.5 bits (171), Expect(4) = 2e-69
 Identities = 33/102 (32%), Positives = 60/102 (58%)
 Frame = +3

Query: 1761 ATLPFYAMQTAKIPCSILDELEQINRDFLGR*GRF*EDTCHFSWDVICKSTEAGRLGIKK 1940
            +++P + M T  +P S LD L++++R FL             SW  +CK    G LGI+K
Sbjct: 323  SSIPVHTMSTIALPKSTLDGLDKVSRSFLWGSSVTQRKQHLISWKRVCKPRSEGGLGIRK 382

Query: 1941 MREMNQVFLAKLGWRMLKQPYQLWAQVLWRKCGSPLVDIPNG 2066
             ++MN+  L+K+GWR+++  + LWA+++  +C   + D+ +G
Sbjct: 383  AQDMNKALLSKVGWRLIQDYHSLWARIM--RCNYRVQDVRDG 422


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score =  105 bits (262), Expect(4) = 4e-67
 Identities = 54/129 (41%), Positives = 74/129 (57%)
 Frame = +2

Query: 1301 SLCLEVLGHQILQHVGTGDWKPIRLSRSGPPLTYLFFVDHLFLFSEASEQHAMIMEDILR 1480
            +L +E L H I   V    WKP+ ++R G  +++LFF D L LF EASE  A IM D L 
Sbjct: 649  NLVMERLAHDIQTRVNARTWKPVHITRGGTGISHLFFADDLMLFGEASEHQAQIMFDCLD 708

Query: 1481 QFCSWSGQKINMGESKLFVSCNTSTAVAMAISSKWGIPFTDDLGKYLGVPMLNGCVTNHT 1660
             F + SG K+N  +S LF S N +  +  AI S   +P  + LG YLG+PML   V+ +T
Sbjct: 709  SFSNASGLKVNFSKSLLFCSSNVNAGLKRAIGSILQVPVAESLGTYLGIPMLKERVSRNT 768

Query: 1661 YKEVVVKTR 1687
            +  V+ K R
Sbjct: 769  FNAVIDKMR 777



 Score = 95.9 bits (237), Expect(4) = 4e-67
 Identities = 44/107 (41%), Positives = 70/107 (65%)
 Frame = +3

Query: 981  LKPLITKLIEEQQSSFVPGKHGVDNIVLVQAIIHSMRIKKGQKGWMAVK*DLEKAYDRIE 1160
            L+P+++ +I   Q+SF+PG+  +DN++L Q ++HSM   + +K  M +K DL+KAYD + 
Sbjct: 530  LRPIMSNIIGPHQNSFLPGRSTMDNVILTQEVVHSMNNPRRKKKQMILKVDLQKAYDSVS 589

Query: 1161 WNFLCNVHRIVGFKDRLLEFILFCISSTSLSVL*NGERLDSFTPSRG 1301
            W++L       GF  RL++ ILF +  +SL++L NG RL  F P RG
Sbjct: 590  WDYLEETLEDFGFPRRLIDLILFSLQESSLAILWNGGRLPPFKPGRG 636



 Score = 65.9 bits (159), Expect(4) = 4e-67
 Identities = 34/93 (36%), Positives = 50/93 (53%)
 Frame = +1

Query: 700 EEIEIATFHMGTNKAPGSDNLPPFFFQKNWHIVGSITCKFVRATFTNGYFSPNMNEMIIT 879
           EE++ A F M    +PG D +P  F+Q+ W  VG      V   F NG    +  +  +T
Sbjct: 436 EEVKKAVFGMKKYGSPGPDGIPAVFYQQFWGEVGPAMTDMVNHAFENGSTYISQLQAFMT 495

Query: 880 LIPELDHPEKISQFRPISFYNMVAKYITKIVTN 978
           LIP+ D PE  + FRPI+  N+  K I+K++ N
Sbjct: 496 LIPKKDTPETAADFRPITLLNVSFKVISKVLVN 528



 Score = 59.7 bits (143), Expect(4) = 4e-67
 Identities = 30/91 (32%), Positives = 47/91 (51%)
 Frame = +3

Query: 1761 ATLPFYAMQTAKIPCSILDELEQINRDFLGR*GRF*EDTCHFSWDVICKSTEAGRLGIKK 1940
            AT+P Y MQ   +P S  +E+++  R+FL             +W  ICK    G LG++ 
Sbjct: 802  ATVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRM 861

Query: 1941 MREMNQVFLAKLGWRMLKQPYQLWAQVLWRK 2033
             R+ N+ FL K+ W++     +LW +VL  K
Sbjct: 862  ARDFNRAFLTKMAWQIFSNIDKLWVKVLREK 892



 Score = 45.8 bits (107), Expect(2) = 1e-07
 Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
 Frame = +2

Query: 290 KKRC*AQINGVQKRLAIGGSP-LGEPGEQLASEYSAILE*EELFWWQKSRAKWWVEGENN 466
           K++   +I G+Q+      S  L +  ++L SE + +L  EE  W+QK+R  W   G+ N
Sbjct: 297 KRKIENRILGIQRAWNYNTSVRLQDLEKRLLSELNEVLVQEETLWFQKARTDWIRNGDRN 356

Query: 467 DWYFHLYAKVMRRNSKVLLLQNDHGVSVDDRDML 568
             ++H  A + R  ++V  L+   G   DD D+L
Sbjct: 357 TTFYHRSALIKRNRNRVRFLKL-QGAWTDDADLL 389



 Score = 39.3 bits (90), Expect(2) = 1e-07
 Identities = 22/81 (27%), Positives = 40/81 (49%)
 Frame = +1

Query: 31  YPETEVRHLPRIKSDHHPLLVKCIVK*TMPAKEKPFLFLTAWLHNSEFESFLCNMWQSFG 210
           +PE +V  LPR+ SDH+P+L             +P  F  AWL + +++       +  G
Sbjct: 209 FPEAKVSVLPRLCSDHNPILFLDEAGNPPVRSLRPVRFEAAWLTSEDYKHIWKEATEREG 268

Query: 211 TDFSCTIAEFVEKSVI*KRDI 273
           ++    IA   +KS++  R++
Sbjct: 269 SNLEDIIATVTQKSLLWNRNV 289


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score =  105 bits (262), Expect(4) = 7e-67
 Identities = 54/129 (41%), Positives = 74/129 (57%)
 Frame = +2

Query: 1301 SLCLEVLGHQILQHVGTGDWKPIRLSRSGPPLTYLFFVDHLFLFSEASEQHAMIMEDILR 1480
            +L +E L H I   V    WKP+ ++R G  +++LFF D L LF EASE  A IM D L 
Sbjct: 649  NLVMERLAHDIQTRVNARTWKPVHITRGGTGISHLFFADDLMLFGEASEHQAQIMFDCLD 708

Query: 1481 QFCSWSGQKINMGESKLFVSCNTSTAVAMAISSKWGIPFTDDLGKYLGVPMLNGCVTNHT 1660
             F + SG K+N  +S LF S N +  +  AI S   +P  + LG YLG+PML   V+ +T
Sbjct: 709  SFSNASGLKVNFSKSLLFCSSNVNAGLKRAIGSILQVPVAESLGTYLGIPMLKERVSRNT 768

Query: 1661 YKEVVVKTR 1687
            +  V+ K R
Sbjct: 769  FNAVIDKMR 777



 Score = 95.9 bits (237), Expect(4) = 7e-67
 Identities = 44/107 (41%), Positives = 70/107 (65%)
 Frame = +3

Query: 981  LKPLITKLIEEQQSSFVPGKHGVDNIVLVQAIIHSMRIKKGQKGWMAVK*DLEKAYDRIE 1160
            L+P+++ +I   Q+SF+PG+  +DN++L Q ++HSM   + +K  M +K DL+KAYD + 
Sbjct: 530  LRPIMSNIIGPHQNSFLPGRSTMDNVILTQEVVHSMNNPRRKKKQMILKVDLQKAYDSVS 589

Query: 1161 WNFLCNVHRIVGFKDRLLEFILFCISSTSLSVL*NGERLDSFTPSRG 1301
            W++L       GF  RL++ ILF +  +SL++L NG RL  F P RG
Sbjct: 590  WDYLEETLEDFGFPRRLIDLILFSLQESSLAILWNGGRLPPFKPGRG 636



 Score = 65.1 bits (157), Expect(4) = 7e-67
 Identities = 34/93 (36%), Positives = 49/93 (52%)
 Frame = +1

Query: 700 EEIEIATFHMGTNKAPGSDNLPPFFFQKNWHIVGSITCKFVRATFTNGYFSPNMNEMIIT 879
           EE++ A F M    +PG D +P  F+Q+ W  VG      V   F NG    +  +  +T
Sbjct: 436 EEVKKAVFGMKKYGSPGPDGIPAVFYQQFWGEVGPAMTDMVNHAFENGSTYISQLQAFMT 495

Query: 880 LIPELDHPEKISQFRPISFYNMVAKYITKIVTN 978
           LIP+ D PE  + FRPI+  N   K I+K++ N
Sbjct: 496 LIPKKDTPETAADFRPITLLNASFKVISKVLVN 528



 Score = 59.7 bits (143), Expect(4) = 7e-67
 Identities = 30/91 (32%), Positives = 47/91 (51%)
 Frame = +3

Query: 1761 ATLPFYAMQTAKIPCSILDELEQINRDFLGR*GRF*EDTCHFSWDVICKSTEAGRLGIKK 1940
            AT+P Y MQ   +P S  +E+++  R+FL             +W  ICK    G LG++ 
Sbjct: 802  ATVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRM 861

Query: 1941 MREMNQVFLAKLGWRMLKQPYQLWAQVLWRK 2033
             R+ N+ FL K+ W++     +LW +VL  K
Sbjct: 862  ARDFNRAFLTKMAWQIFSNIDKLWVKVLREK 892



 Score = 45.8 bits (107), Expect(2) = 1e-07
 Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
 Frame = +2

Query: 290 KKRC*AQINGVQKRLAIGGSP-LGEPGEQLASEYSAILE*EELFWWQKSRAKWWVEGENN 466
           K++   +I G+Q+      S  L +  ++L SE + +L  EE  W+QK+R  W   G+ N
Sbjct: 297 KRKIENRILGIQRAWNYNTSVRLQDLEKRLLSELNEVLVQEETLWFQKARTDWIRNGDRN 356

Query: 467 DWYFHLYAKVMRRNSKVLLLQNDHGVSVDDRDML 568
             ++H  A + R  ++V  L+   G   DD D+L
Sbjct: 357 TTFYHRSALIKRNRNRVRFLKL-QGAWTDDADLL 389



 Score = 39.3 bits (90), Expect(2) = 1e-07
 Identities = 22/81 (27%), Positives = 40/81 (49%)
 Frame = +1

Query: 31  YPETEVRHLPRIKSDHHPLLVKCIVK*TMPAKEKPFLFLTAWLHNSEFESFLCNMWQSFG 210
           +PE +V  LPR+ SDH+P+L             +P  F  AWL + +++       +  G
Sbjct: 209 FPEAKVSVLPRLCSDHNPILFLDEAGNPPVRSLRPVRFEAAWLTSEDYKHIWKEATEREG 268

Query: 211 TDFSCTIAEFVEKSVI*KRDI 273
           ++    IA   +KS++  R++
Sbjct: 269 SNLEDIIATVTQKSLLWNRNV 289


>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score =  105 bits (261), Expect(4) = 6e-66
 Identities = 54/129 (41%), Positives = 73/129 (56%)
 Frame = +2

Query: 1301 SLCLEVLGHQILQHVGTGDWKPIRLSRSGPPLTYLFFVDHLFLFSEASEQHAMIMEDILR 1480
            +L +E L H I   V    WKP+ ++R G  +++LFF D L LF EASE  A IM D L 
Sbjct: 1181 NLVMERLAHDIQTRVNARTWKPVHITRGGTGISHLFFADDLMLFGEASEHQAQIMFDCLD 1240

Query: 1481 QFCSWSGQKINMGESKLFVSCNTSTAVAMAISSKWGIPFTDDLGKYLGVPMLNGCVTNHT 1660
             F   SG K+N  +S LF S N +  +  AI S   +P  + LG YLG+PML   V+ +T
Sbjct: 1241 SFSDASGLKVNFSKSLLFCSSNVNAGLKRAIGSILQVPVAESLGTYLGIPMLKERVSRNT 1300

Query: 1661 YKEVVVKTR 1687
            +  V+ K R
Sbjct: 1301 FNAVIDKMR 1309



 Score = 93.2 bits (230), Expect(4) = 6e-66
 Identities = 43/107 (40%), Positives = 69/107 (64%)
 Frame = +3

Query: 981  LKPLITKLIEEQQSSFVPGKHGVDNIVLVQAIIHSMRIKKGQKGWMAVK*DLEKAYDRIE 1160
            L+P+++ +I   Q+SF+PG+  +DN++L Q ++HSM   + +K  M +K DL+KAYD + 
Sbjct: 1062 LRPIMSNIIGPHQNSFLPGRSTMDNVILTQEVVHSMNNPRRKKKQMILKVDLQKAYDSVS 1121

Query: 1161 WNFLCNVHRIVGFKDRLLEFILFCISSTSLSVL*NGERLDSFTPSRG 1301
            W++L       GF  RL++ ILF +  +SL++L NG R   F P RG
Sbjct: 1122 WDYLEETLEDFGFPRRLIDLILFSLQESSLAILWNGGRPPPFKPGRG 1168



 Score = 65.1 bits (157), Expect(4) = 6e-66
 Identities = 34/93 (36%), Positives = 50/93 (53%)
 Frame = +1

Query: 700  EEIEIATFHMGTNKAPGSDNLPPFFFQKNWHIVGSITCKFVRATFTNGYFSPNMNEMIIT 879
            EE++ A F M    +PG D +P  F+Q+ W  VG      V   F NG    +  +  +T
Sbjct: 968  EEVKKAVFGMKKYGSPGPDGIPAVFYQQFWGEVGPAMTDMVNHAFENGSTYISQLQAFMT 1027

Query: 880  LIPELDHPEKISQFRPISFYNMVAKYITKIVTN 978
            LIP+ D PE  + FRPI+  N+  K I+K++ N
Sbjct: 1028 LIPKKDTPETAADFRPITLPNVSFKVISKVLVN 1060



 Score = 59.7 bits (143), Expect(4) = 6e-66
 Identities = 30/91 (32%), Positives = 47/91 (51%)
 Frame = +3

Query: 1761 ATLPFYAMQTAKIPCSILDELEQINRDFLGR*GRF*EDTCHFSWDVICKSTEAGRLGIKK 1940
            AT+P Y MQ   +P S  +E+++  R+FL             +W  ICK    G LG++ 
Sbjct: 1334 ATVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRM 1393

Query: 1941 MREMNQVFLAKLGWRMLKQPYQLWAQVLWRK 2033
             R+ N+ FL K+ W++     +LW +VL  K
Sbjct: 1394 ARDFNRAFLTKMAWQIFSNIDKLWVKVLREK 1424



 Score = 45.8 bits (107), Expect(2) = 1e-07
 Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
 Frame = +2

Query: 290  KKRC*AQINGVQKRLAIGGSP-LGEPGEQLASEYSAILE*EELFWWQKSRAKWWVEGENN 466
            K++   +I G+Q+      S  L +  ++L SE + +L  EE  W+QK+R  W   G+ N
Sbjct: 829  KRKIENRILGIQRAWNYNTSVRLQDLEKRLLSELNEVLVQEETLWFQKARTDWIRNGDRN 888

Query: 467  DWYFHLYAKVMRRNSKVLLLQNDHGVSVDDRDML 568
              ++H  A + R  ++V  L+   G   DD D+L
Sbjct: 889  TTFYHRSALIKRNRNRVRFLKL-QGAWTDDADLL 921



 Score = 39.3 bits (90), Expect(2) = 1e-07
 Identities = 22/81 (27%), Positives = 40/81 (49%)
 Frame = +1

Query: 31  YPETEVRHLPRIKSDHHPLLVKCIVK*TMPAKEKPFLFLTAWLHNSEFESFLCNMWQSFG 210
           +PE +V  LPR+ SDH+P+L             +P  F  AWL + +++       +  G
Sbjct: 741 FPEAKVSVLPRLCSDHNPILFLDEAGNPPDRSLRPVRFEAAWLTSEDYKHIWKEATEREG 800

Query: 211 TDFSCTIAEFVEKSVI*KRDI 273
           ++    IA   +KS++  R++
Sbjct: 801 SNLEDIIATATQKSLLWNRNV 821


>gb|EOY02376.1| LINE-type retrotransposon LIb DNA, Insertion at the S11 site-like
            protein [Theobroma cacao]
          Length = 620

 Score =  111 bits (277), Expect(4) = 7e-59
 Identities = 54/128 (42%), Positives = 77/128 (60%)
 Frame = +2

Query: 1304 LCLEVLGHQILQHVGTGDWKPIRLSRSGPPLTYLFFVDHLFLFSEASEQHAMIMEDILRQ 1483
            LC+E L H I Q V    WKPIRL + GPPLTYLFF+D L L +EASE    +++ +L  
Sbjct: 223  LCIEKLAHGIKQAVEQEMWKPIRLGKHGPPLTYLFFMDDLILLAEASESQMEVIKGVLED 282

Query: 1484 FCSWSGQKINMGESKLFVSCNTSTAVAMAISSKWGIPFTDDLGKYLGVPMLNGCVTNHTY 1663
            FC+    K+ + +S  F S N    + + +    G  ++D +GKY+GVP+L+G  T H Y
Sbjct: 283  FCACLRGKVCIAKSTFFCSKNVPMELNIKVKDCSGFSYSDSMGKYIGVPLLHGRKTAHIY 342

Query: 1664 KEVVVKTR 1687
            K ++ K R
Sbjct: 343  KSLIDKVR 350



 Score = 93.2 bits (230), Expect(4) = 7e-59
 Identities = 45/107 (42%), Positives = 68/107 (63%)
 Frame = +3

Query: 981  LKPLITKLIEEQQSSFVPGKHGVDNIVLVQAIIHSMRIKKGQKGWMAVK*DLEKAYDRIE 1160
            LKP +  LIEE Q+SF+   H VDNI++VQ ++HS   K+G++GWM VK DLEKAYDR+ 
Sbjct: 103  LKPFMNLLIEETQASFILETHIVDNIIVVQEVVHSFHEKQGRRGWMMVKIDLEKAYDRLR 162

Query: 1161 WNFLCNVHRIVGFKDRLLEFILFCISSTSLSVL*NGERLDSFTPSRG 1301
            W F+ +        + +++ ++   ++ S  +L NG   + F PSRG
Sbjct: 163  WEFIYDSLVEAQIPENIIDILIRSWNAHSSHILWNGTCFEKFFPSRG 209



 Score = 63.2 bits (152), Expect(4) = 7e-59
 Identities = 36/94 (38%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
 Frame = +1

Query: 700 EEIEIATFHMGTNKAPGSDNLPPFFFQKNWH-IVGSITCKFVRATFTNGYFSPNMNEMII 876
           EE+  A F M   KA G D  P  FFQ  W  +VG    ++V+  F       NM   +I
Sbjct: 8   EEVREALFAMKPIKALGLDGFPALFFQSQWQQVVGQKLFEYVQNVFNGTEIGSNMCSSLI 67

Query: 877 TLIPELDHPEKISQFRPISFYNMVAKYITKIVTN 978
            LIP+ + PE  SQ RPIS   ++ K + K+V N
Sbjct: 68  VLIPKGEAPEYSSQCRPISLLPVIFKVLVKVVAN 101



 Score = 31.6 bits (70), Expect(4) = 7e-59
 Identities = 16/53 (30%), Positives = 24/53 (45%)
 Frame = +3

Query: 1764 TLPFYAMQTAKIPCSILDELEQINRDFLGR*GRF*EDTCHFSWDVICKSTEAG 1922
            ++P Y MQT  IP  I  ++E + R+FL       +      W  +CK    G
Sbjct: 376  SIPLYTMQTISIPLEICKKIELLCRNFLWHGDGQSKKVHLLRWSTLCKPKAQG 428


>gb|EMJ28511.1| hypothetical protein PRUPE_ppa016553mg [Prunus persica]
          Length = 992

 Score = 92.8 bits (229), Expect(4) = 6e-57
 Identities = 46/106 (43%), Positives = 63/106 (59%)
 Frame = +1

Query: 676 LLN*EVCDEEIEIATFHMGTNKAPGSDNLPPFFFQKNWHIVGSITCKFVRATFTNGYFSP 855
           LL  + CD EI  A F M   KAPG D +PP FFQK WHIVGS   + ++   T+G    
Sbjct: 68  LLLTDYCDAEIHEAVFQMYPTKAPGPDGMPPIFFQKYWHIVGSDVTRAIKDFLTSGRLLQ 127

Query: 856 NMNEMIITLIPELDHPEKISQFRPISFYNMVAKYITKIVTNS*NLL 993
            +N   + LIP++ HP+ +SQ RPIS  N++ K  TK++ N   L+
Sbjct: 128 KINFTHVVLIPKVKHPKDMSQLRPISLCNVLFKIATKVLANRLKLI 173



 Score = 86.7 bits (213), Expect(4) = 6e-57
 Identities = 46/108 (42%), Positives = 70/108 (64%), Gaps = 1/108 (0%)
 Frame = +3

Query: 981  LKPLITKLIEEQQSSFVPGKHGVDNIVLVQAIIHSMRIKK-GQKGWMAVK*DLEKAYDRI 1157
            LK ++ K+I   QS+ + G+   DN +L   IIH +R ++ G+KG+MA+K D+ KAYDRI
Sbjct: 170  LKLILDKIISPSQSALISGRLISDNTILAAEIIHYLRRRRRGKKGFMALKMDMSKAYDRI 229

Query: 1158 EWNFLCNVHRIVGFKDRLLEFILFCISSTSLSVL*NGERLDSFTPSRG 1301
            EW+FL  + R +GF ++ ++ +L CIS+ S S + NG       PSRG
Sbjct: 230  EWSFLEAIMRKLGFAEQWIQLMLTCISTVSYSFVINGTPHGFLHPSRG 277



 Score = 63.9 bits (154), Expect(4) = 6e-57
 Identities = 40/122 (32%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
 Frame = +2

Query: 1304 LCLEVLGHQILQHVGTGDWKPIRLSRSGPPLTYLFFVDHLFLFSEASEQHAMIMEDILRQ 1483
            LC E L   I Q    G  K + + R  P +++LFF D  FLF+ A+    M ++DIL  
Sbjct: 291  LCAEGLTALIAQKEREGFLKGVSICRGAPAISHLFFADDSFLFAWANMADCMALKDILDT 350

Query: 1484 FCSWSGQKINMGESKLFVSCNTSTAVAMAISSKWGIPFTDDLGKYLGVPML----NGCVT 1651
            +    GQ++N  +S +  S N      + ++   GIP  D   +YLG+PM+     G   
Sbjct: 351  YERALGQQVNFQKSAVCFSKNVHRGDQLMLAQFMGIPCVDHHSQYLGLPMVLDKKKGASF 410

Query: 1652 NH 1657
            NH
Sbjct: 411  NH 412



 Score = 49.3 bits (116), Expect(4) = 6e-57
 Identities = 26/89 (29%), Positives = 41/89 (46%)
 Frame = +3

Query: 1767 LPFYAMQTAKIPCSILDELEQINRDFLGR*GRF*EDTCHFSWDVICKSTEAGRLGIKKMR 1946
            +P Y M    +P  + ++L ++   F        +     +WD +C   E G LG + + 
Sbjct: 445  IPIYTMSCFLLPKYVCEDLNKLVAQFWWNSSTENKKIHWMAWDRLCAPKEEGGLGFRNLH 504

Query: 1947 EMNQVFLAKLGWRMLKQPYQLWAQVLWRK 2033
              N   LAK GWR+L+ P  L  +VL  K
Sbjct: 505  AFNLALLAKQGWRLLQNPDSLVTKVLKAK 533


>gb|EMJ27906.1| hypothetical protein PRUPE_ppa020120mg [Prunus persica]
          Length = 1011

 Score = 87.0 bits (214), Expect(5) = 8e-54
 Identities = 46/108 (42%), Positives = 70/108 (64%), Gaps = 1/108 (0%)
 Frame = +3

Query: 981  LKPLITKLIEEQQSSFVPGKHGVDNIVLVQAIIHSMRIKK-GQKGWMAVK*DLEKAYDRI 1157
            LK ++ K+I   QS+F+ G+   DN +L   IIH +R ++ G+KG+M +K D+ KAYDRI
Sbjct: 428  LKLILHKIISPSQSAFISGRLISDNTILAAEIIHYLRRRRRGKKGFMVLKMDMSKAYDRI 487

Query: 1158 EWNFLCNVHRIVGFKDRLLEFILFCISSTSLSVL*NGERLDSFTPSRG 1301
            EW+FL  + R +GF ++ ++ +L CIS+ S S + NG       PSRG
Sbjct: 488  EWSFLEAIMRKLGFAEQWIQLMLTCISTVSYSFVINGTPHGFLHPSRG 535



 Score = 69.7 bits (169), Expect(5) = 8e-54
 Identities = 40/106 (37%), Positives = 51/106 (48%)
 Frame = +1

Query: 676 LLN*EVCDEEIEIATFHMGTNKAPGSDNLPPFFFQKNWHIVGSITCKFVRATFTNGYFSP 855
           LL  + CD EI  A F M   KAPG D +PP FFQK WHIVGS                 
Sbjct: 354 LLLTDYCDAEIHEAVFQMYPTKAPGPDGMPPIFFQKYWHIVGS----------------- 396

Query: 856 NMNEMIITLIPELDHPEKISQFRPISFYNMVAKYITKIVTNS*NLL 993
                      ++ HP+ +SQ RPIS  N++ K  TK++ N   L+
Sbjct: 397 -----------DVKHPKDMSQLRPISLCNVLFKIATKVLANRLKLI 431



 Score = 55.5 bits (132), Expect(5) = 8e-54
 Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
 Frame = +2

Query: 1304 LCLEVLGHQILQHVGTGDWKPIRLSRSGPPLTYLFFVDHLFLFSEASEQHAMIMEDILRQ 1483
            LC E L   I Q    G  K + + R  P +++LFF D   LF+ A+      M D +R 
Sbjct: 549  LCAEGLTELIAQKEREGFLKGVSICRGAPAISHLFFADDSVLFARAN------MADCMRA 602

Query: 1484 FCSWSGQKINMGESKLFVSCNTSTAVAMAISSKWGIPFTDDLGKYLGVPML----NGCVT 1651
                SGQ++N  +S +  S N      + ++   GIP  D   +YLG+PM+     G   
Sbjct: 603  ----SGQQVNFQKSAVCFSKNVHRGDQLMLAQFMGIPCVDHHSQYLGLPMVLDKKKGASF 658

Query: 1652 NH 1657
            NH
Sbjct: 659  NH 660



 Score = 48.9 bits (115), Expect(5) = 8e-54
 Identities = 26/89 (29%), Positives = 41/89 (46%)
 Frame = +3

Query: 1767 LPFYAMQTAKIPCSILDELEQINRDFLGR*GRF*EDTCHFSWDVICKSTEAGRLGIKKMR 1946
            +P Y M    +P  + ++L ++   F        +     +WD +C   E G LG + + 
Sbjct: 693  IPIYTMSYFLLPKYVCEDLNKLVAQFWWNSSTENKKIHWMAWDRLCAPKEEGGLGFRNLH 752

Query: 1947 EMNQVFLAKLGWRMLKQPYQLWAQVLWRK 2033
              N   LAK GWR+L+ P  L  +VL  K
Sbjct: 753  AFNLALLAKQGWRLLQNPDSLITKVLKAK 781



 Score = 41.2 bits (95), Expect(5) = 8e-54
 Identities = 21/68 (30%), Positives = 37/68 (54%)
 Frame = +2

Query: 374 LASEYSAILE*EELFWWQKSRAKWWVEGENNDWYFHLYAKVMRRNSKVLLLQNDHGVSVD 553
           L S+  ++L  EE FW Q+S+  W  EG+ N  +FH  A   ++ + V  L+++ G   +
Sbjct: 252 LMSQLDSLLSREEAFWKQRSKVSWLKEGDRNTRFFHQRASNRKQRNYVKGLRDNTGRWRE 311

Query: 554 DRDMLRSI 577
           D   L+ +
Sbjct: 312 DEQGLQYV 319


>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score = 92.0 bits (227), Expect(4) = 9e-54
 Identities = 41/96 (42%), Positives = 60/96 (62%)
 Frame = +1

Query: 691 VCDEEIEIATFHMGTNKAPGSDNLPPFFFQKNWHIVGSITCKFVRATFTNGYFSPNMNEM 870
           V  EEI+ A F +  +K+PG D  PP+FFQK W ++G   C+ V+A F +GY    +N  
Sbjct: 444 VSPEEIKNAVFDLAPDKSPGPDGFPPYFFQKYWTLIGKSVCRAVQAFFHSGYMLKEVNHT 503

Query: 871 IITLIPELDHPEKISQFRPISFYNMVAKYITKIVTN 978
            + LIP++D P   + FRPIS  + + K I+KI+TN
Sbjct: 504 FLALIPKVDKPVNANHFRPISLCSTIYKVISKIITN 539



 Score = 91.3 bits (225), Expect(4) = 9e-54
 Identities = 46/107 (42%), Positives = 66/107 (61%)
 Frame = +3

Query: 981  LKPLITKLIEEQQSSFVPGKHGVDNIVLVQAIIHSMRIKKGQKGWMAVK*DLEKAYDRIE 1160
            LK  + K+I   Q +F+P +   DNI++   + HS + K G+ GW+A+K D+EKAYDR+E
Sbjct: 541  LKITLGKIIHPLQGAFIPERLIQDNILIAHEVFHSFKNKTGRGGWIAIKLDMEKAYDRLE 600

Query: 1161 WNFLCNVHRIVGFKDRLLEFILFCISSTSLSVL*NGERLDSFTPSRG 1301
            W ++      +GF    +E+I  CISS S SVL NG   + F PSRG
Sbjct: 601  WKYIYTTMDKMGFSPIWIEWIRSCISSASFSVLVNGIPGERFFPSRG 647



 Score = 60.1 bits (144), Expect(4) = 9e-54
 Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
 Frame = +2

Query: 1304 LCLEVLGHQILQHVGT-GDWKPIRLSRSGPPLTYLFFVDHLFLFSEASEQHAMIMEDILR 1480
            LC E+L  +  +     G    + + R+   + +L F D   +F++A+E     +  IL 
Sbjct: 661  LCAELLAREFSKACHEPGKLIGVPIGRTRTRIPFLTFADDTMIFAKATEASCHKIRQILD 720

Query: 1481 QFCSWSGQKINMGESKLFVSCNTSTAVAMAISSKWGIPFTDDLGKYLGVPMLNGCVTNHT 1660
            ++C  SGQ +N  +S    S N      +  +S  G+  + +LG YLG P++N  VT  T
Sbjct: 721  KYCLMSGQLVNYHKSAFQCSPNVRDIDKVNFASILGMQESSELGDYLGCPIINSRVTKET 780

Query: 1661 YKEVVVKT 1684
            +  V+ KT
Sbjct: 781  FAGVISKT 788



 Score = 38.5 bits (88), Expect(4) = 9e-54
 Identities = 19/86 (22%), Positives = 38/86 (44%)
 Frame = +3

Query: 1776 YAMQTAKIPCSILDELEQINRDFLGR*GRF*EDTCHFSWDVICKSTEAGRLGIKKMREMN 1955
            + MQ+  +P  +L  L+   R+F        +      W+ IC+    G +G +K    N
Sbjct: 819  FQMQSFTLPKKVLTTLDTTYRNFFWNKDPAAKSANFIGWNKICQPKSVGGVGFRKAEVTN 878

Query: 1956 QVFLAKLGWRMLKQPYQLWAQVLWRK 2033
                 KL W+++     +W +++ +K
Sbjct: 879  IALQMKLLWKIMVSKDNIWVKLVTQK 904


>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score = 84.3 bits (207), Expect(4) = 9e-53
 Identities = 41/107 (38%), Positives = 67/107 (62%)
 Frame = +3

Query: 981  LKPLITKLIEEQQSSFVPGKHGVDNIVLVQAIIHSMRIKKGQKGWMAVK*DLEKAYDRIE 1160
            +KP++ +LI   Q+SFVPG++  +NI++ + +    +    ++  MA+K DL KAYD +E
Sbjct: 530  IKPILGELIHPSQTSFVPGRNIQENIIIAKEMAFLFKKSNPKRNIMALKIDLSKAYDSLE 589

Query: 1161 WNFLCNVHRIVGFKDRLLEFILFCISSTSLSVL*NGERLDSFTPSRG 1301
            W F+    +   F   L+  I+ CISS ++S++ NGE   SF+PSRG
Sbjct: 590  WGFIRETLQGFNFPQSLIALIMDCISSPAISLIWNGEVTQSFSPSRG 636



 Score = 67.4 bits (163), Expect(4) = 9e-53
 Identities = 31/88 (35%), Positives = 50/88 (56%)
 Frame = +3

Query: 1761 ATLPFYAMQTAKIPCSILDELEQINRDFLGR*GRF*EDTCHFSWDVICKSTEAGRLGIKK 1940
            ++ P Y MQ++ +P S+++E+E+  R FL             SWD IC  T  G LG ++
Sbjct: 801  SSFPVYGMQSSLLPVSVMNEIEKDCRKFLWNKMDKSHYLARMSWDRICSPTGKGGLGFRR 860

Query: 1941 MREMNQVFLAKLGWRMLKQPYQLWAQVL 2024
            +   N  F+AKLGW ++K   +LW ++L
Sbjct: 861  LHNWNLAFMAKLGWMIIKDETKLWVRIL 888



 Score = 65.9 bits (159), Expect(4) = 9e-53
 Identities = 31/94 (32%), Positives = 48/94 (51%)
 Frame = +1

Query: 697 DEEIEIATFHMGTNKAPGSDNLPPFFFQKNWHIVGSITCKFVRATFTNGYFSPNMNEMII 876
           ++EI+ A   M   K+PG D +  FFF+K W  +G      +   F N      +++  +
Sbjct: 435 EDEIKEALAQMAPLKSPGPDGIQAFFFKKYWEQMGPSVVSLIIRAFENNRIPSGLSDSFL 494

Query: 877 TLIPELDHPEKISQFRPISFYNMVAKYITKIVTN 978
            LIP+++ P     FRPI   N V K ITK++ N
Sbjct: 495 ALIPKIESPVCCKDFRPIGLCNTVYKMITKVIAN 528



 Score = 60.8 bits (146), Expect(4) = 9e-53
 Identities = 34/128 (26%), Positives = 67/128 (52%)
 Frame = +2

Query: 1304 LCLEVLGHQILQHVGTGDWKPIRLSRSGPPLTYLFFVDHLFLFSEASEQHAMIMEDILRQ 1483
            LC+E L   I   +  G WKPI++S S   ++++F+ D +FLF +AS ++  +++++L +
Sbjct: 650  LCMERLSMLISDRIRDGSWKPIKIS-SDLGVSHIFYADDVFLFGQASVRNGGVIQNVLEE 708

Query: 1484 FCSWSGQKINMGESKLFVSCNTSTAVAMAISSKWGIPFTDDLGKYLGVPMLNGCVTNHTY 1663
            F + SG ++NM +S        +      ++    +  +   GKYLG  +L   +    Y
Sbjct: 709  FGNISGLRVNMSKSLAIFPPKMNPQRRRMLADFLTMKGSTSFGKYLGCNILPNKLRRGDY 768

Query: 1664 KEVVVKTR 1687
              ++ K +
Sbjct: 769  DGLLEKVK 776



 Score = 44.7 bits (104), Expect(2) = 7e-07
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
 Frame = +2

Query: 290 KKRC*AQINGVQKRLAIGGSP-LGEPGEQLASEYSAILE*EELFWWQKSRAKWWVEGENN 466
           KKR  A++ G+QK L+I  S  L +    L  E + + + E +FW QK+       G+ N
Sbjct: 297 KKRILARLGGIQKSLSIHPSVFLSKLEIDLLVELNELSKQERVFWAQKAGIDRAKLGDMN 356

Query: 467 DWYFHLYAKVMRRNSKVLLLQNDHGVSVDDRDMLRSI 577
             YFH  AK+     K+  L+ND+   V + + L+ +
Sbjct: 357 TKYFHTLAKIRTCKRKISCLKNDNHDWVSNNEDLKKM 393



 Score = 38.1 bits (87), Expect(2) = 7e-07
 Identities = 19/59 (32%), Positives = 32/59 (54%)
 Frame = +1

Query: 28  VYPETEVRHLPRIKSDHHPLLVKCIVK*TMPAKEKPFLFLTAWLHNSEFESFLCNMWQS 204
           ++P+T+V HLPR  SDH PLL+  +      ++  PF     W ++ +F + +   W S
Sbjct: 210 LFPDTKVIHLPRTFSDHCPLLI--LFNENPRSESFPFRCKEVWAYHPDFTNVIEETWGS 266


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 82.8 bits (203), Expect(5) = 1e-52
 Identities = 42/108 (38%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
 Frame = +3

Query: 981  LKPLITKLIEEQQSSFVPGKHGVDNIVLVQAIIHSMRIKKGQKG-WMAVK*DLEKAYDRI 1157
            LK ++  LI E QS+FV G+   DNI++ Q + H +R     K  +MA+K D+ KAYD++
Sbjct: 309  LKTVLPNLISETQSAFVDGRLISDNILIAQEMFHGLRTNSSCKDKFMAIKTDMSKAYDQV 368

Query: 1158 EWNFLCNVHRIVGFKDRLLEFILFCISSTSLSVL*NGERLDSFTPSRG 1301
            EWNF+  + R +GF ++ + +I++CI++    VL NG+      P RG
Sbjct: 369  EWNFIEALLRKMGFCEKWISWIMWCITTVQYKVLINGQPKGLIIPERG 416



 Score = 68.9 bits (167), Expect(5) = 1e-52
 Identities = 37/109 (33%), Positives = 56/109 (51%)
 Frame = +1

Query: 676  LLN*EVCDEEIEIATFHMGTNKAPGSDNLPPFFFQKNWHIVGSITCKFVRATFTNGYFSP 855
            LL  +  + E+  A F +   KAPG D +   FFQK+W I+ S     V +    G F  
Sbjct: 207  LLTADATECEVRAALFMIHPEKAPGPDGMTALFFQKSWAIIKSDLLSLVNSFLQEGVFDK 266

Query: 856  NMNEMIITLIPELDHPEKISQFRPISFYNMVAKYITKIVTNS*NLL*PN 1002
             +N   I LIP+ + P ++++ RPIS  N+  K I+KI+      + PN
Sbjct: 267  RLNTTNICLIPKTERPTRMTELRPISLCNVGYKVISKILCQRLKTVLPN 315



 Score = 51.2 bits (121), Expect(5) = 1e-52
 Identities = 32/109 (29%), Positives = 54/109 (49%)
 Frame = +2

Query: 1304 LCLEVLGHQILQHVGTGDWKPIRLSRSGPPLTYLFFVDHLFLFSEASEQHAMIMEDILRQ 1483
            LC EVL   I +         I+++   P +++L F D    F +A+++   I+ +IL+Q
Sbjct: 430  LCTEVLIANIRKAERQNLITGIKVATPSPAVSHLLFADDSLFFCKANKEQCGIILEILKQ 489

Query: 1484 FCSWSGQKINMGESKLFVSCNTSTAVAMAISSKWGIPFTDDLGKYLGVP 1630
            + S SGQ+IN  +S +        ++   I    GI     +G YLG+P
Sbjct: 490  YESVSGQQINFSKSSIQFGHKVEDSIKADIKLILGIHNLGGMGSYLGLP 538



 Score = 47.8 bits (112), Expect(5) = 1e-52
 Identities = 28/92 (30%), Positives = 42/92 (45%)
 Frame = +3

Query: 1746 LK*CPATLPFYAMQTAKIPCSILDELEQINRDFLGR*GRF*EDTCHFSWDVICKSTEAGR 1925
            +K   ATLP Y M   ++P +I  +L      F              +WD +C S   G 
Sbjct: 577  IKSVAATLPRYVMSCFRLPKAITSKLTSAVAKFWWSSNGDSRGMHWMAWDKLCSSKSDGG 636

Query: 1926 LGIKKMREMNQVFLAKLGWRMLKQPYQLWAQV 2021
            LG + + + N   LAK  WR++  P  L+A+V
Sbjct: 637  LGFRNVDDFNSALLAKQLWRLITAPDSLFAKV 668



 Score = 47.4 bits (111), Expect(5) = 1e-52
 Identities = 20/54 (37%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
 Frame = +2

Query: 407 EELFWWQKSRAKWWVEGENNDWYFHLYAKVMRRNSKVLLLQNDHGV-SVDDRDM 565
           EE +W+QKSR+ W   G+NN  +FH   K  R  +++  L +++G+ S++D D+
Sbjct: 116 EEQYWYQKSRSLWMKLGDNNSKFFHALTKQRRARNRITGLHDENGIWSIEDDDI 169


>gb|EEC84753.1| hypothetical protein OsI_31756 [Oryza sativa Indica Group]
          Length = 1350

 Score = 87.4 bits (215), Expect(4) = 1e-50
 Identities = 49/110 (44%), Positives = 64/110 (58%), Gaps = 1/110 (0%)
 Frame = +3

Query: 981  LKPLITKLIEEQQSSFVPGKHGVDNIVLVQAIIHSMRIKKG-QKGWMAVK*DLEKAYDRI 1157
            LKPL+ +LI   QS+FVPG+   DN +L     H ++  K   K   A K DL KAYDR+
Sbjct: 724  LKPLLDELISVNQSAFVPGRMITDNALLAFEYFHYIQKNKNPNKAASAYKLDLSKAYDRV 783

Query: 1158 EWNFLCNVHRIVGFKDRLLEFILFCISSTSLSVL*NGERLDSFTPSRGRC 1307
            +W FL      +GF  R + +I+ CI++   SV  NG  LDSF PSRG C
Sbjct: 784  DWGFLEQAMYKLGFAHRWVRWIMECITTVRYSVKFNGTLLDSFAPSRGLC 833



 Score = 75.1 bits (183), Expect(4) = 1e-50
 Identities = 34/94 (36%), Positives = 54/94 (57%)
 Frame = +1

Query: 697 DEEIEIATFHMGTNKAPGSDNLPPFFFQKNWHIVGSITCKFVRATFTNGYFSPNMNEMII 876
           +EE+ IA F +G  KAPG D  P  F+Q+NW  + S   + V+  F +G     +N+  I
Sbjct: 629 EEEVAIAMFQIGPIKAPGPDGFPAHFYQRNWGGLKSDIVRAVKEFFRSGIMPVGVNDTAI 688

Query: 877 TLIPELDHPEKISQFRPISFYNMVAKYITKIVTN 978
            LIP++D P ++   RPI   N++ K ++K + N
Sbjct: 689 VLIPKIDQPTELKDLRPIGLCNVIYKVVSKCLVN 722



 Score = 58.2 bits (139), Expect(4) = 1e-50
 Identities = 37/116 (31%), Positives = 53/116 (45%)
 Frame = +3

Query: 1686 ERSLPSGGRNLSRRRHVDS*LK*CPATLPFYAMQTAKIPCSILDELEQINRDFLGR*GRF 1865
            E  L SGG+ +  +  + +        +P Y M   K+P S+ DEL +I R F     + 
Sbjct: 980  ENYLSSGGKEILIKALIQA--------IPVYVMGIFKLPESVCDELTRITRGFWWGGEKG 1031

Query: 1866 *EDTCHFSWDVICKSTEAGRLGIKKMREMNQVFLAKLGWRMLKQPYQLWAQVLWRK 2033
               T   +WD + K    G LG +  R  NQ  LA+  WR++  P  L A VL  K
Sbjct: 1032 ARKTHWKAWDTLTKPKNCGGLGFRDFRLFNQALLARQAWRLIDSPDSLCAMVLKAK 1087



 Score = 50.4 bits (119), Expect(4) = 1e-50
 Identities = 29/112 (25%), Positives = 53/112 (47%)
 Frame = +2

Query: 1337 QHVGTGDWKPIRLSRSGPPLTYLFFVDHLFLFSEASEQHAMIMEDILRQFCSWSGQKINM 1516
            + V  G   PI +  S P +++L F D   LF +A  + A ++ ++L  + + +GQ+IN 
Sbjct: 856  EKVQQGVLSPIHICHSAPGISHLLFADDTLLFLKAVPEQAEVIREVLNDYATATGQQINP 915

Query: 1517 GESKLFVSCNTSTAVAMAISSKWGIPFTDDLGKYLGVPMLNGCVTNHTYKEV 1672
             +  +    ++S  V  AI     I       KYLG P  +G +    ++ +
Sbjct: 916  SKCSIMFGDSSSELVQEAIRDTLQIANNVFEDKYLGFPTPDGRLKKGKFQSI 967


>gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group]
            gi|54291856|gb|AAV32224.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 1936

 Score = 78.6 bits (192), Expect(5) = 1e-50
 Identities = 41/108 (37%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
 Frame = +3

Query: 981  LKPLITKLIEEQQSSFVPGKHGVDNIVLVQAIIHSM-RIKKGQKGWMAVK*DLEKAYDRI 1157
            L+P++  L+ ++QS+F+ G+   DN +L     HS+ + KK      A K DL KAYDR+
Sbjct: 1165 LRPILDDLVSKEQSAFIQGRMITDNALLAFECFHSIQKNKKANSAACAYKLDLSKAYDRV 1224

Query: 1158 EWNFLCNVHRIVGFKDRLLEFILFCISSTSLSVL*NGERLDSFTPSRG 1301
            +W FL      +GF  R + +I+ C+++   SV  NG  L SF P+RG
Sbjct: 1225 DWRFLELALNKLGFAHRWVSWIMLCVTTVRYSVKFNGTLLRSFAPTRG 1272



 Score = 68.9 bits (167), Expect(5) = 1e-50
 Identities = 36/97 (37%), Positives = 52/97 (53%)
 Frame = +1

Query: 688  EVCDEEIEIATFHMGTNKAPGSDNLPPFFFQKNWHIVGSITCKFVRATFTNGYFSPNMNE 867
            E  +EEI  A F +G  K+P  D  P  F+Q+NW  + S     VR  F +G     +N+
Sbjct: 1067 EFKEEEIAQAIFQIGPLKSPRPDGFPARFYQRNWGTLKSDIILAVRNFFQSGLMPKGVND 1126

Query: 868  MIITLIPELDHPEKISQFRPISFYNMVAKYITKIVTN 978
              I LIP+ D P  +  +RPIS  N+V K ++K + N
Sbjct: 1127 TAIVLIPKKDQPIDLKDYRPISLCNVVYKVVSKCLVN 1163



 Score = 53.5 bits (127), Expect(5) = 1e-50
 Identities = 35/116 (30%), Positives = 54/116 (46%)
 Frame = +3

Query: 1686 ERSLPSGGRNLSRRRHVDS*LK*CPATLPFYAMQTAKIPCSILDELEQINRDFLGR*GRF 1865
            E  L SGG+ +  +  + +        +P Y M   K P S+ DEL ++ R+F       
Sbjct: 1421 ENFLSSGGKEILIKAVIQA--------IPVYVMGLFKFPDSVYDELTKMTRNFWWGADNG 1472

Query: 1866 *EDTCHFSWDVICKSTEAGRLGIKKMREMNQVFLAKLGWRMLKQPYQLWAQVLWRK 2033
               T   +WD + K+   G LG +  +  NQ  L +  WR+++ P  L AQVL  K
Sbjct: 1473 RRRTHWRAWDSLTKAKINGGLGFRDYKLFNQALLTRQAWRLIEFPNSLCAQVLKAK 1528



 Score = 48.1 bits (113), Expect(5) = 1e-50
 Identities = 25/115 (21%), Positives = 55/115 (47%)
 Frame = +2

Query: 1337 QHVGTGDWKPIRLSRSGPPLTYLFFVDHLFLFSEASEQHAMIMEDILRQFCSWSGQKINM 1516
            + V      P+++ R  P ++YL F D   LF +A ++ A +++++L  +   +GQ IN 
Sbjct: 1297 EKVAQNSLTPLKICRQAPGISYLLFADDTLLFFKAEKKEAEVVKEVLTNYAQGTGQLINP 1356

Query: 1517 GESKLFVSCNTSTAVAMAISSKWGIPFTDDLGKYLGVPMLNGCVTNHTYKEVVVK 1681
             +  +     + ++V+  I +   +   +   +YLG P   G +    ++ +  K
Sbjct: 1357 AKCSILFGEASPSSVSEDIRNTLQVERDNFEDRYLGFPTPEGRMHKGRFQSLQAK 1411



 Score = 42.0 bits (97), Expect(5) = 1e-50
 Identities = 20/70 (28%), Positives = 36/70 (51%)
 Frame = +2

Query: 371  QLASEYSAILE*EELFWWQKSRAKWWVEGENNDWYFHLYAKVMRRNSKVLLLQNDHGVSV 550
            Q     + +L  EE+ W Q+SR  W  EG+ N  +FH  A    + +K+  L++++G   
Sbjct: 960  QATDHMNEMLYREEMLWLQRSRVNWLKEGDRNTRFFHSRAVWRAKKNKISKLRDENGAIH 1019

Query: 551  DDRDMLRSIA 580
                +L ++A
Sbjct: 1020 STTSVLETMA 1029


>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
            Japonica Group]
          Length = 1382

 Score = 75.9 bits (185), Expect(5) = 3e-50
 Identities = 37/107 (34%), Positives = 61/107 (57%)
 Frame = +3

Query: 981  LKPLITKLIEEQQSSFVPGKHGVDNIVLVQAIIHSMRIKKGQKGWMAVK*DLEKAYDRIE 1160
            LKP +  ++ E QS+FVPG+   D+ ++    +H++R +  +  + A+K D+ KAYDR+E
Sbjct: 541  LKPFLPDIVSEFQSAFVPGRLITDSALVAYECLHTIRKQHNKNPFFALKIDMMKAYDRVE 600

Query: 1161 WNFLCNVHRIVGFKDRLLEFILFCISSTSLSVL*NGERLDSFTPSRG 1301
            W +L      +GF    +  ++ C+SS   +V  NGE      PSRG
Sbjct: 601  WAYLSGCLSKLGFSQDWINTVMRCVSSVRYAVKINGELTKPVVPSRG 647



 Score = 72.8 bits (177), Expect(5) = 3e-50
 Identities = 33/94 (35%), Positives = 54/94 (57%)
 Frame = +1

Query: 697 DEEIEIATFHMGTNKAPGSDNLPPFFFQKNWHIVGSITCKFVRATFTNGYFSPNMNEMII 876
           +EEI+ A F MG+ KAPG D  P  F+Q +W I+    C  VR           + + ++
Sbjct: 446 NEEIKTALFQMGSTKAPGPDGFPALFYQTHWGILEEHICNAVRGFLLGEEIPEGLCDSVV 505

Query: 877 TLIPELDHPEKISQFRPISFYNMVAKYITKIVTN 978
            LIP++++   +S+FRPIS  N++ K  +K++ N
Sbjct: 506 VLIPKVNNASHLSKFRPISLCNVLYKIASKVLAN 539



 Score = 67.4 bits (163), Expect(5) = 3e-50
 Identities = 37/121 (30%), Positives = 63/121 (52%)
 Frame = +2

Query: 1304 LCLEVLGHQILQHVGTGDWKPIRLSRSGPPLTYLFFVDHLFLFSEASEQHAMIMEDILRQ 1483
            LC E L   + +    G+ + I+  R GPP+++L F D    F++A  ++   +++ LR 
Sbjct: 661  LCTEGLSCLLHKKEVAGELQGIKNGRHGPPISHLLFADDSIFFAKADSRNVQALKNTLRS 720

Query: 1484 FCSWSGQKINMGESKLFVSCNTSTAVAMAISSKWGIPFTDDLGKYLGVPMLNGCVTNHTY 1663
            +CS SGQKIN+ +S +F       AV +++ S   +        YLG+P   G  T + +
Sbjct: 721  YCSASGQKINLHKSSIFFGKRCPDAVKISVKSCLQVDNEVLQDSYLGMPTEIGLATTNFF 780

Query: 1664 K 1666
            K
Sbjct: 781  K 781



 Score = 38.1 bits (87), Expect(5) = 3e-50
 Identities = 19/62 (30%), Positives = 32/62 (51%)
 Frame = +2

Query: 395 ILE*EELFWWQKSRAKWWVEGENNDWYFHLYAKVMRRNSKVLLLQNDHGVSVDDRDMLRS 574
           + E EE+   Q+SR  W  EG+ N  +FH  A   RR +++  L  D G     ++ ++ 
Sbjct: 344 LFEKEEIMARQRSRVDWLREGDRNTAFFHARASARRRTNRIKELVRDDGSRCISQEGIKR 403

Query: 575 IA 580
           +A
Sbjct: 404 MA 405



 Score = 35.8 bits (81), Expect(5) = 3e-50
 Identities = 25/100 (25%), Positives = 43/100 (43%)
 Frame = +3

Query: 1725 RRHVDS*LK*CPATLPFYAMQTAKIPCSILDELEQINRDFLGR*GRF*EDTCHFSWDVIC 1904
            R  +++ LK     +P Y M   +IP SI ++++    D         +     SW  + 
Sbjct: 801  RAGMETMLKAVAQAIPNYVMSCFRIPVSICEKMKTCIADHWWGFEDGKKKMHWKSWSWLS 860

Query: 1905 KSTEAGRLGIKKMREMNQVFLAKLGWRMLKQPYQLWAQVL 2024
                 G +G ++    NQ  L +  WR+L  P  L ++VL
Sbjct: 861  TPKFLGGMGFREFTTFNQAMLGRQCWRLLTDPDSLCSRVL 900


>gb|AAP54617.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group] gi|125575397|gb|EAZ16681.1| hypothetical
            protein OsJ_32156 [Oryza sativa Japonica Group]
          Length = 1339

 Score = 75.9 bits (185), Expect(5) = 3e-50
 Identities = 37/107 (34%), Positives = 61/107 (57%)
 Frame = +3

Query: 981  LKPLITKLIEEQQSSFVPGKHGVDNIVLVQAIIHSMRIKKGQKGWMAVK*DLEKAYDRIE 1160
            LKP +  ++ E QS+FVPG+   D+ ++    +H++R +  +  + A+K D+ KAYDR+E
Sbjct: 498  LKPFLPDIVSEFQSAFVPGRLITDSALVAYECLHTIRKQHNKNPFFALKIDMMKAYDRVE 557

Query: 1161 WNFLCNVHRIVGFKDRLLEFILFCISSTSLSVL*NGERLDSFTPSRG 1301
            W +L      +GF    +  ++ C+SS   +V  NGE      PSRG
Sbjct: 558  WAYLSGCLSKLGFSQDWINTVMRCVSSVRYAVKINGELTKPVVPSRG 604



 Score = 72.8 bits (177), Expect(5) = 3e-50
 Identities = 33/94 (35%), Positives = 54/94 (57%)
 Frame = +1

Query: 697 DEEIEIATFHMGTNKAPGSDNLPPFFFQKNWHIVGSITCKFVRATFTNGYFSPNMNEMII 876
           +EEI+ A F MG+ KAPG D  P  F+Q +W I+    C  VR           + + ++
Sbjct: 403 NEEIKTALFQMGSTKAPGPDGFPALFYQTHWGILEEHICNAVRGFLLGEEIPEGLCDSVV 462

Query: 877 TLIPELDHPEKISQFRPISFYNMVAKYITKIVTN 978
            LIP++++   +S+FRPIS  N++ K  +K++ N
Sbjct: 463 VLIPKVNNASHLSKFRPISLCNVLYKIASKVLAN 496



 Score = 67.4 bits (163), Expect(5) = 3e-50
 Identities = 37/121 (30%), Positives = 63/121 (52%)
 Frame = +2

Query: 1304 LCLEVLGHQILQHVGTGDWKPIRLSRSGPPLTYLFFVDHLFLFSEASEQHAMIMEDILRQ 1483
            LC E L   + +    G+ + I+  R GPP+++L F D    F++A  ++   +++ LR 
Sbjct: 618  LCTEGLSCLLHKKEVAGELQGIKNGRHGPPISHLLFADDSIFFAKADSRNVQALKNTLRS 677

Query: 1484 FCSWSGQKINMGESKLFVSCNTSTAVAMAISSKWGIPFTDDLGKYLGVPMLNGCVTNHTY 1663
            +CS SGQKIN+ +S +F       AV +++ S   +        YLG+P   G  T + +
Sbjct: 678  YCSASGQKINLHKSSIFFGKRCPDAVKISVKSCLQVDNEVLQDSYLGMPTEIGLATTNFF 737

Query: 1664 K 1666
            K
Sbjct: 738  K 738



 Score = 38.1 bits (87), Expect(5) = 3e-50
 Identities = 19/62 (30%), Positives = 32/62 (51%)
 Frame = +2

Query: 395 ILE*EELFWWQKSRAKWWVEGENNDWYFHLYAKVMRRNSKVLLLQNDHGVSVDDRDMLRS 574
           + E EE+   Q+SR  W  EG+ N  +FH  A   RR +++  L  D G     ++ ++ 
Sbjct: 301 LFEKEEIMARQRSRVDWLREGDRNTAFFHARASARRRTNRIKELVRDDGSRCISQEGIKR 360

Query: 575 IA 580
           +A
Sbjct: 361 MA 362



 Score = 35.8 bits (81), Expect(5) = 3e-50
 Identities = 25/100 (25%), Positives = 43/100 (43%)
 Frame = +3

Query: 1725 RRHVDS*LK*CPATLPFYAMQTAKIPCSILDELEQINRDFLGR*GRF*EDTCHFSWDVIC 1904
            R  +++ LK     +P Y M   +IP SI ++++    D         +     SW  + 
Sbjct: 758  RAGMETMLKAVAQAIPNYVMSCFRIPVSICEKMKTCIADHWWGFEDGKKKMHWKSWSWLS 817

Query: 1905 KSTEAGRLGIKKMREMNQVFLAKLGWRMLKQPYQLWAQVL 2024
                 G +G ++    NQ  L +  WR+L  P  L ++VL
Sbjct: 818  TPKFLGGMGFREFTTFNQAMLGRQCWRLLTDPDSLCSRVL 857


>gb|ABA96650.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1100

 Score = 79.7 bits (195), Expect(5) = 3e-50
 Identities = 38/108 (35%), Positives = 68/108 (62%), Gaps = 1/108 (0%)
 Frame = +3

Query: 981  LKPLITKLIEEQQSSFVPGKHGVDNIVLVQAIIHSM-RIKKGQKGWMAVK*DLEKAYDRI 1157
            L+P++  +I ++QS+F+PG+   DN ++     H++ + K+  + + A K DL KAYDR+
Sbjct: 642  LRPILESIISQEQSAFIPGRMITDNALIAFECFHNIAQSKRESQEFCAYKLDLAKAYDRV 701

Query: 1158 EWNFLCNVHRIVGFKDRLLEFILFCISSTSLSVL*NGERLDSFTPSRG 1301
            +W +L  V   +GF +  +++++ C++S   +V  NG  L SF PSRG
Sbjct: 702  DWQYLEGVLDRMGFSNTWIQWMMACVTSVRYAVRFNGSMLKSFQPSRG 749



 Score = 74.3 bits (181), Expect(5) = 3e-50
 Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
 Frame = +1

Query: 679 LN*EVC----DEEIEIATFHMGTNKAPGSDNLPPFFFQKNWHIVGSITCKFVRATFTNGY 846
           +N ++C    D+EI  A F +G  KAPG D  P  FFQ+NW ++ +  CK V+  F    
Sbjct: 537 MNEDLCKAFSDKEISDALFQIGPIKAPGPDGFPARFFQRNWEVLKNDVCKAVKLFFDQKV 596

Query: 847 FSPNMNEMIITLIPELDHPEKISQFRPISFYNMVAKYITKIVTN 978
               +N   I LIP+    +++  FRPIS  N++ K + K + N
Sbjct: 597 MPEGVNTTAIVLIPKKKESKELKDFRPISLCNVIYKVVAKCLVN 640



 Score = 55.1 bits (131), Expect(5) = 3e-50
 Identities = 36/116 (31%), Positives = 53/116 (45%)
 Frame = +3

Query: 1686 ERSLPSGGRNLSRRRHVDS*LK*CPATLPFYAMQTAKIPCSILDELEQINRDFLGR*GRF 1865
            E+ LP GG+ +  +  + +        LP Y M   K+P S  +E  Q+ R F     R 
Sbjct: 898  EKHLPMGGKEVLIKSVIQA--------LPTYMMSVFKLPPSFCEEYMQLVRKFWWGEDRS 949

Query: 1866 *EDTCHFSWDVICKSTEAGRLGIKKMREMNQVFLAKLGWRMLKQPYQLWAQVLWRK 2033
                   SW  + K    G +G K M+  NQ  LA+  WR+++ P  L A+VL  K
Sbjct: 950  QRKVHWASWQQLIKPKSMGGMGFKDMKIFNQALLARQAWRLVQFPDSLCARVLKAK 1005



 Score = 44.7 bits (104), Expect(5) = 3e-50
 Identities = 25/100 (25%), Positives = 47/100 (47%)
 Frame = +2

Query: 1343 VGTGDWKPIRLSRSGPPLTYLFFVDHLFLFSEASEQHAMIMEDILRQFCSWSGQKINMGE 1522
            V TGD  P+++ R  P +++L F D   LF +A+ + A ++++ L  +   + Q ++  +
Sbjct: 776  VRTGDLVPLKVCRQAPGISHLLFADDSLLFFKANVEQATVVKEALNLYERCTSQLLSPAK 835

Query: 1523 SKLFVSCNTSTAVAMAISSKWGIPFTDDLGKYLGVPMLNG 1642
              +    + S      I S   +       KYLG+P   G
Sbjct: 836  CSMLFGKHCSDQTQPGIKSLLDVQQNSFEDKYLGLPTPEG 875



 Score = 36.2 bits (82), Expect(5) = 3e-50
 Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
 Frame = +2

Query: 326 KRLAIGGSPLGEPGEQLASE-YSAILE*EELFWWQKSRAKWWVEGENNDWYFHLYAKVMR 502
           + L +GG    +   Q  S     IL  EE+ W Q+SR  W  EG+ N   FH  A    
Sbjct: 422 EELQLGGRHTHDQEYQSCSRRMEEILYREEMMWLQRSRVAWLREGDRNT-SFHRKAAWRH 480

Query: 503 RNSKVLLLQNDHGVSVDDRDMLRSIA 580
           R +K+  L    G   D R  + ++A
Sbjct: 481 RKNKISKLFLPDGSWTDQRKEMETMA 506