BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00017939
         (301 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511082.1| pentatricopeptide repeat-containing protein,...    87   3e-15
ref|XP_004241650.1| PREDICTED: pentatricopeptide repeat-containi...    80   3e-13
ref|XP_006366292.1| PREDICTED: pentatricopeptide repeat-containi...    79   5e-13
emb|CBI15765.3| unnamed protein product [Vitis vinifera]               78   1e-12
ref|XP_002280974.1| PREDICTED: pentatricopeptide repeat-containi...    78   1e-12
emb|CAN83162.1| hypothetical protein VITISV_022557 [Vitis vinifera]    78   1e-12
ref|XP_004155710.1| PREDICTED: pentatricopeptide repeat-containi...    78   1e-12
ref|XP_004142589.1| PREDICTED: pentatricopeptide repeat-containi...    78   1e-12
gb|EOY22664.1| Tetratricopeptide repeat (TPR)-like superfamily p...    75   7e-12
gb|EOY22663.1| Tetratricopeptide repeat-like superfamily protein...    75   7e-12
dbj|BAJ53121.1| JHL07K02.11 [Jatropha curcas]                          75   9e-12
gb|ESW10918.1| hypothetical protein PHAVU_009G249300g [Phaseolus...    74   2e-11
ref|XP_006485076.1| PREDICTED: pentatricopeptide repeat-containi...    72   8e-11
ref|XP_006436971.1| hypothetical protein CICLE_v10033814mg [Citr...    72   8e-11
ref|XP_006586917.1| PREDICTED: pentatricopeptide repeat-containi...    67   2e-09
ref|XP_006384245.1| hypothetical protein POPTR_0004s11010g [Popu...    65   9e-09
ref|XP_002331286.1| predicted protein [Populus trichocarpa]            65   9e-09
ref|XP_002873351.1| predicted protein [Arabidopsis lyrata subsp....    64   2e-08
gb|AFJ66185.1| hypothetical protein 11M19.3 [Arabidopsis halleri]      64   2e-08
ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containi...    64   2e-08

>ref|XP_002511082.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550197|gb|EEF51684.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 274

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 39/70 (55%), Positives = 53/70 (75%)
 Frame = +2

Query: 92  ACKLQNELPYPNIDVVCANSIISSFMKIGEISIAKKIFYNVPVRDVVTWNSLIGGYVKNA 271
           AC++ N++    +++V  N +I + M++GE  IAKK+FY +P RDVVTWNSLIGGYVKNA
Sbjct: 64  ACEVINQVFSWTVNLVALNLVIDNIMRVGECEIAKKVFYKMPARDVVTWNSLIGGYVKNA 123

Query: 272 SFQEALNTFR 301
            F+EAL  FR
Sbjct: 124 RFEEALRFFR 133


>ref|XP_004241650.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g50990-like [Solanum lycopersicum]
          Length = 554

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 41/76 (53%), Positives = 51/76 (67%)
 Frame = +2

Query: 74  CKSPIFACKLQNELPYPNIDVVCANSIISSFMKIGEISIAKKIFYNVPVRDVVTWNSLIG 253
           C     A +L  E+P    D V AN +IS FMK+G + +AK IF  VP+RD+VTWNSLIG
Sbjct: 99  CDRLNLARQLLVEIPTEYFDAVSANLMISRFMKMGTVDVAKMIFNEVPLRDLVTWNSLIG 158

Query: 254 GYVKNASFQEALNTFR 301
           GYVKN   +EAL+ FR
Sbjct: 159 GYVKNDLCKEALSVFR 174


>ref|XP_006366292.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g50990-like [Solanum tuberosum]
          Length = 556

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 40/76 (52%), Positives = 51/76 (67%)
 Frame = +2

Query: 74  CKSPIFACKLQNELPYPNIDVVCANSIISSFMKIGEISIAKKIFYNVPVRDVVTWNSLIG 253
           C     A +L  E+P    D V AN +I+ FMK+G + +AK IF  VP+RD+VTWNSLIG
Sbjct: 101 CDRLNLARQLLVEIPTEYFDAVSANLMIARFMKMGAVDVAKMIFNEVPLRDLVTWNSLIG 160

Query: 254 GYVKNASFQEALNTFR 301
           GYVKN   +EAL+ FR
Sbjct: 161 GYVKNDMCKEALSVFR 176


>emb|CBI15765.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 38/76 (50%), Positives = 51/76 (67%)
 Frame = +2

Query: 74  CKSPIFACKLQNELPYPNIDVVCANSIISSFMKIGEISIAKKIFYNVPVRDVVTWNSLIG 253
           C     A +L +E+PY   D++ AN II+S MK+GE   AK++F  +  RDVVTWNS+IG
Sbjct: 95  CDCLDLAHQLLDEMPYWGFDLITANLIIASLMKVGEFDFAKRVFRKMLRRDVVTWNSMIG 154

Query: 254 GYVKNASFQEALNTFR 301
           G V+N  F+EAL  FR
Sbjct: 155 GCVRNERFEEALRFFR 170


>ref|XP_002280974.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50990
           [Vitis vinifera]
          Length = 523

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 38/76 (50%), Positives = 51/76 (67%)
 Frame = +2

Query: 74  CKSPIFACKLQNELPYPNIDVVCANSIISSFMKIGEISIAKKIFYNVPVRDVVTWNSLIG 253
           C     A +L +E+PY   D++ AN II+S MK+GE   AK++F  +  RDVVTWNS+IG
Sbjct: 68  CDCLDLAHQLLDEMPYWGFDLITANLIIASLMKVGEFDFAKRVFRKMLRRDVVTWNSMIG 127

Query: 254 GYVKNASFQEALNTFR 301
           G V+N  F+EAL  FR
Sbjct: 128 GCVRNERFEEALRFFR 143


>emb|CAN83162.1| hypothetical protein VITISV_022557 [Vitis vinifera]
          Length = 562

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 38/76 (50%), Positives = 51/76 (67%)
 Frame = +2

Query: 74  CKSPIFACKLQNELPYPNIDVVCANSIISSFMKIGEISIAKKIFYNVPVRDVVTWNSLIG 253
           C     A +L +E+PY   D++ AN II+S MK+GE   AK++F  +  RDVVTWNS+IG
Sbjct: 107 CDCLDLAHQLLDEMPYWGFDLITANLIIASLMKVGEFDFAKRVFRKMLRRDVVTWNSMIG 166

Query: 254 GYVKNASFQEALNTFR 301
           G V+N  F+EAL  FR
Sbjct: 167 GCVRNERFEEALRFFR 182


>ref|XP_004155710.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g50990-like [Cucumis sativus]
          Length = 376

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 35/58 (60%), Positives = 43/58 (74%)
 Frame = +2

Query: 128 IDVVCANSIISSFMKIGEISIAKKIFYNVPVRDVVTWNSLIGGYVKNASFQEALNTFR 301
           +D+V  N +I +FMKIGE   AKK+FY +P RDVVTWNS+IGG VKNA + EA   FR
Sbjct: 101 LDLVAMNLLIGNFMKIGECKFAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFR 158


>ref|XP_004142589.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g50990-like [Cucumis sativus]
          Length = 628

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 35/58 (60%), Positives = 43/58 (74%)
 Frame = +2

Query: 128 IDVVCANSIISSFMKIGEISIAKKIFYNVPVRDVVTWNSLIGGYVKNASFQEALNTFR 301
           +D+V  N +I +FMKIGE   AKK+FY +P RDVVTWNS+IGG VKNA + EA   FR
Sbjct: 191 LDLVAMNLLIGNFMKIGECKFAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFR 248


>gb|EOY22664.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 2
           [Theobroma cacao]
          Length = 542

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 40/100 (40%), Positives = 57/100 (57%)
 Frame = +2

Query: 2   AIIVKQGXXXXXXXXXXXXXXXXXCKSPIFACKLQNELPYPNIDVVCANSIISSFMKIGE 181
           AII K G                 C   + A +L +++   + ++V  N +I   MK+GE
Sbjct: 63  AIIFKLGYGTYPSLVTTLISTYLQCGWLVLAHQLIDQVFRSDCNLVILNLVIEHLMKLGE 122

Query: 182 ISIAKKIFYNVPVRDVVTWNSLIGGYVKNASFQEALNTFR 301
              AKK+F+ +PVRD+VTWN +IGGYV+NA F+EAL  FR
Sbjct: 123 YGSAKKVFHKMPVRDLVTWNIMIGGYVRNARFEEALTFFR 162


>gb|EOY22663.1| Tetratricopeptide repeat-like superfamily protein isoform 1
           [Theobroma cacao]
          Length = 568

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 40/100 (40%), Positives = 57/100 (57%)
 Frame = +2

Query: 2   AIIVKQGXXXXXXXXXXXXXXXXXCKSPIFACKLQNELPYPNIDVVCANSIISSFMKIGE 181
           AII K G                 C   + A +L +++   + ++V  N +I   MK+GE
Sbjct: 63  AIIFKLGYGTYPSLVTTLISTYLQCGWLVLAHQLIDQVFRSDCNLVILNLVIEHLMKLGE 122

Query: 182 ISIAKKIFYNVPVRDVVTWNSLIGGYVKNASFQEALNTFR 301
              AKK+F+ +PVRD+VTWN +IGGYV+NA F+EAL  FR
Sbjct: 123 YGSAKKVFHKMPVRDLVTWNIMIGGYVRNARFEEALTFFR 162


>dbj|BAJ53121.1| JHL07K02.11 [Jatropha curcas]
          Length = 514

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 33/52 (63%), Positives = 42/52 (80%)
 Frame = +2

Query: 146 NSIISSFMKIGEISIAKKIFYNVPVRDVVTWNSLIGGYVKNASFQEALNTFR 301
           N +I SFM+IGE  IAKK+F  +P RDVVTWNS+IGGYV+N  F+EAL +F+
Sbjct: 83  NLVIDSFMRIGEYEIAKKVFCKMPDRDVVTWNSMIGGYVRNGKFEEALRSFQ 134


>gb|ESW10918.1| hypothetical protein PHAVU_009G249300g [Phaseolus vulgaris]
          Length = 543

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 33/58 (56%), Positives = 44/58 (75%)
 Frame = +2

Query: 128 IDVVCANSIISSFMKIGEISIAKKIFYNVPVRDVVTWNSLIGGYVKNASFQEALNTFR 301
           +D+   N +I S MK G+  +AKK+F  +PVRDVVTWNS++GGYVKN+ F +ALN FR
Sbjct: 106 LDLFSRNLVIESLMKGGQCDVAKKMFGKMPVRDVVTWNSMVGGYVKNSRFLDALNLFR 163


>ref|XP_006485076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g50990-like [Citrus sinensis]
          Length = 537

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 33/70 (47%), Positives = 50/70 (71%)
 Frame = +2

Query: 92  ACKLQNELPYPNIDVVCANSIISSFMKIGEISIAKKIFYNVPVRDVVTWNSLIGGYVKNA 271
           A ++ +E+   + ++V  N II + M+IGE  +AKK+F  +P +DVV+WNS+IGG+V+NA
Sbjct: 88  ANRILDEVSLSDFNLVTMNIIIENCMRIGECEVAKKVFCKMPDKDVVSWNSMIGGFVRNA 147

Query: 272 SFQEALNTFR 301
            F EAL  FR
Sbjct: 148 RFDEALRFFR 157


>ref|XP_006436971.1| hypothetical protein CICLE_v10033814mg [Citrus clementina]
           gi|557539167|gb|ESR50211.1| hypothetical protein
           CICLE_v10033814mg [Citrus clementina]
          Length = 540

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 33/70 (47%), Positives = 50/70 (71%)
 Frame = +2

Query: 92  ACKLQNELPYPNIDVVCANSIISSFMKIGEISIAKKIFYNVPVRDVVTWNSLIGGYVKNA 271
           A ++ +E+   + ++V  N II + M+IGE  +AKK+F  +P +DVV+WNS+IGG+V+NA
Sbjct: 91  ANRILDEVSLSDFNLVTMNIIIENCMRIGECEVAKKVFCKMPDKDVVSWNSMIGGFVRNA 150

Query: 272 SFQEALNTFR 301
            F EAL  FR
Sbjct: 151 RFDEALRFFR 160


>ref|XP_006586917.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g50990-like [Glycine max]
          Length = 542

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 31/58 (53%), Positives = 42/58 (72%)
 Frame = +2

Query: 128 IDVVCANSIISSFMKIGEISIAKKIFYNVPVRDVVTWNSLIGGYVKNASFQEALNTFR 301
           +D+   N +I S +K G+  IAKK+F  + VRDVVTWNS+IGGYV+N  F +AL+ FR
Sbjct: 105 LDLFSMNLVIESLVKGGQCDIAKKVFGKMSVRDVVTWNSMIGGYVRNLRFFDALSIFR 162


>ref|XP_006384245.1| hypothetical protein POPTR_0004s11010g [Populus trichocarpa]
           gi|550340791|gb|ERP62042.1| hypothetical protein
           POPTR_0004s11010g [Populus trichocarpa]
          Length = 897

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 30/70 (42%), Positives = 49/70 (70%)
 Frame = +2

Query: 89  FACKLQNELPYPNIDVVCANSIISSFMKIGEISIAKKIFYNVPVRDVVTWNSLIGGYVKN 268
           +ACK+ +++     DVV  NSIIS +   GE+ IA+K FY +P RDVV+WNS+I G+++N
Sbjct: 102 YACKVFDKMYLR--DVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQN 159

Query: 269 ASFQEALNTF 298
              +++++ F
Sbjct: 160 GECRKSIDVF 169


>ref|XP_002331286.1| predicted protein [Populus trichocarpa]
          Length = 897

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 30/70 (42%), Positives = 49/70 (70%)
 Frame = +2

Query: 89  FACKLQNELPYPNIDVVCANSIISSFMKIGEISIAKKIFYNVPVRDVVTWNSLIGGYVKN 268
           +ACK+ +++     DVV  NSIIS +   GE+ IA+K FY +P RDVV+WNS+I G+++N
Sbjct: 102 YACKVFDKMYLR--DVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQN 159

Query: 269 ASFQEALNTF 298
              +++++ F
Sbjct: 160 GECRKSIDVF 169


>ref|XP_002873351.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297319188|gb|EFH49610.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 1281

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 32/69 (46%), Positives = 47/69 (68%)
 Frame = +2

Query: 92   ACKLQNELPYPNIDVVCANSIISSFMKIGEISIAKKIFYNVPVRDVVTWNSLIGGYVKNA 271
            A KL +E+PY N+  V  NSI+ S+ K G++  A+ +F  + +RDVVTW+S+I GYVK+ 
Sbjct: 908  ARKLFDEMPYKNL--VTWNSILDSYAKSGDVVSARLVFDEMTMRDVVTWSSMIDGYVKSG 965

Query: 272  SFQEALNTF 298
             + EAL  F
Sbjct: 966  EYNEALEIF 974


>gb|AFJ66185.1| hypothetical protein 11M19.3 [Arabidopsis halleri]
          Length = 511

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 30/56 (53%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
 Frame = +2

Query: 137 VC-ANSIISSFMKIGEISIAKKIFYNVPVRDVVTWNSLIGGYVKNASFQEALNTFR 301
           VC  N II S MKIGE S+AKK+  N   ++V+TWN +IGGYV+N  ++EAL T +
Sbjct: 75  VCNTNLIIESLMKIGESSLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKTLK 130


>ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 616

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 30/60 (50%), Positives = 42/60 (70%)
 Frame = +2

Query: 122 PNIDVVCANSIISSFMKIGEISIAKKIFYNVPVRDVVTWNSLIGGYVKNASFQEALNTFR 301
           PN DVV  NS+I+ ++K GEI +AKK+F  +  +DVVTW S+I  YV+N    +AL+ FR
Sbjct: 171 PNRDVVSWNSMIAGYLKAGEIELAKKVFETMSDKDVVTWTSMISAYVQNRCPMKALDLFR 230