BLASTX nr result

ID: Catharanthus23_contig00017828 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00017828
         (437 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004239755.1| PREDICTED: uncharacterized protein LOC101253...    57   3e-06
ref|XP_006345904.1| PREDICTED: centromere-associated protein E-l...    56   6e-06

>ref|XP_004239755.1| PREDICTED: uncharacterized protein LOC101253381 [Solanum
           lycopersicum]
          Length = 909

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 42/132 (31%), Positives = 58/132 (43%), Gaps = 2/132 (1%)
 Frame = -1

Query: 437 SNDKSRIKKRVTDNTPXXXXXXXXXXXAIFDGGIGRRNMIDQSGSPCSTSNGSFRQLGRH 258
           S DKS+  K  +  +P           + +D G G++N  D S SPC +     ++ GR 
Sbjct: 28  SIDKSQSSKEAS--SPSLRRSLSLSSGSFYDSGSGKKNFRDPSRSPCHSKKVHPKKSGRD 85

Query: 257 SSRTRTLTPERQNRLKSFEPAPFEAARKVEK--LAVPSSGLQYDXXXXXXXXXXXXXNGV 84
           S R+R  TPERQ     F+    E    V K       S   YD             + V
Sbjct: 86  SCRSRARTPERQPPDNFFQRHDMENGYLVRKHSSGASFSTHHYDPSESSSHSSSNVSSKV 145

Query: 83  LDRYIDGEQQEK 48
           LDRYIDGEQ+++
Sbjct: 146 LDRYIDGEQEQE 157


>ref|XP_006345904.1| PREDICTED: centromere-associated protein E-like isoform X1 [Solanum
           tuberosum] gi|565358179|ref|XP_006345905.1| PREDICTED:
           centromere-associated protein E-like isoform X2 [Solanum
           tuberosum] gi|565358181|ref|XP_006345906.1| PREDICTED:
           centromere-associated protein E-like isoform X3 [Solanum
           tuberosum]
          Length = 907

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 42/132 (31%), Positives = 58/132 (43%), Gaps = 2/132 (1%)
 Frame = -1

Query: 437 SNDKSRIKKRVTDNTPXXXXXXXXXXXAIFDGGIGRRNMIDQSGSPCSTSNGSFRQLGRH 258
           S DKS+ +K V+  +P           + +D G G++N  D S SPC       ++ GR 
Sbjct: 28  SIDKSQSRKEVS--SPSLRRSLSLSSGSFYDSGSGKKNFRDPSRSPCHNKKVHPKKSGRD 85

Query: 257 SSRTRTLTPERQNRLKSFEPAPFEAARKVEK--LAVPSSGLQYDXXXXXXXXXXXXXNGV 84
           S R R  TPERQ     F+    E    + K       S   YD             + V
Sbjct: 86  SCRGRARTPERQPPENFFQRHDTENGYLLRKHSSGASFSTHHYDPSESSSHCSSNVSSKV 145

Query: 83  LDRYIDGEQQEK 48
           LDRYIDGEQ+++
Sbjct: 146 LDRYIDGEQEQE 157


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