BLASTX nr result
ID: Catharanthus23_contig00017173
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00017173
(347 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat... 160 2e-37
emb|CAN77247.1| hypothetical protein VITISV_021658 [Vitis vinifera] 159 4e-37
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 157 1e-36
gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum] 156 3e-36
emb|CAN80356.1| hypothetical protein VITISV_003506 [Vitis vinifera] 156 3e-36
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ... 154 1e-35
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ... 154 1e-35
ref|XP_006596896.1| PREDICTED: uncharacterized protein LOC102664... 152 3e-35
gb|AAD17351.1| contains similarity to retrovirus-related polypro... 151 7e-35
ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662... 150 1e-34
ref|XP_006575965.1| PREDICTED: uncharacterized protein LOC102669... 149 5e-34
gb|ADP20179.1| gag-pol polyprotein [Silene latifolia] 145 4e-33
ref|XP_006366953.1| PREDICTED: uncharacterized protein LOC102594... 145 7e-33
gb|AAQ72731.1| putative reverse transcriptase [Petunia x hybrida] 144 7e-33
gb|ABA98082.1| retrotransposon protein, putative, Ty3-gypsy subc... 142 3e-32
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum... 142 5e-32
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 140 8e-32
gb|AAM15062.1| putative retroelement integrase [Arabidopsis thal... 141 1e-31
dbj|BAH80072.1| putative unclassified retrotransposon protein [O... 140 2e-31
emb|CAN63671.1| hypothetical protein VITISV_006425 [Vitis vinifera] 140 2e-31
>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
Length = 1358
Score = 160 bits (405), Expect = 2e-37
Identities = 73/106 (68%), Positives = 92/106 (86%)
Frame = +3
Query: 30 QAIKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFK 209
QAI++WPTP+ A++VRSFHGL SFYRRF+K+FST+A+PL +++KK F+ KQEQAF+
Sbjct: 877 QAIRDWPTPKTATKVRSFHGLASFYRRFVKDFSTIAAPLNELVKKDVKFEWGPKQEQAFQ 936
Query: 210 LLNEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYF 347
L EKLCSA +LSLPNF+KTFE+ECDASGIGIG VLMQ+G P+AYF
Sbjct: 937 TLKEKLCSAQVLSLPNFDKTFEIECDASGIGIGAVLMQEGHPIAYF 982
>emb|CAN77247.1| hypothetical protein VITISV_021658 [Vitis vinifera]
Length = 1323
Score = 159 bits (402), Expect = 4e-37
Identities = 72/106 (67%), Positives = 93/106 (87%)
Frame = +3
Query: 30 QAIKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFK 209
+AIKEWPTP + +EVRSFHGL SFYRRF+K+FSTLA+PLT+++KK+ GFK ++Q++AF
Sbjct: 731 KAIKEWPTPXSITEVRSFHGLASFYRRFVKDFSTLAAPLTEIVKKSVGFKWGSEQDRAFI 790
Query: 210 LLNEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYF 347
+ E+LC APLLSLP+F KTFE+ECDASGIGIG VLMQ+ +P+AYF
Sbjct: 791 EIKERLCGAPLLSLPDFSKTFEIECDASGIGIGAVLMQEKRPIAYF 836
>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
Length = 1887
Score = 157 bits (397), Expect = 1e-36
Identities = 74/106 (69%), Positives = 89/106 (83%)
Frame = +3
Query: 30 QAIKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFK 209
+AI+EWP+P++ EVRSFHGL FYRRF+K+FSTLA+PLT+VIKK GFK E QE AF+
Sbjct: 1126 KAIREWPSPKSVGEVRSFHGLAGFYRRFVKDFSTLAAPLTEVIKKNVGFKWEQAQEDAFQ 1185
Query: 210 LLNEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYF 347
L EKL AP+LSLP+F KTFE+ECDASG+GIG VLMQD KP+AYF
Sbjct: 1186 ALKEKLTHAPVLSLPDFLKTFEIECDASGVGIGVVLMQDKKPIAYF 1231
>gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]
Length = 1004
Score = 156 bits (394), Expect = 3e-36
Identities = 71/106 (66%), Positives = 88/106 (83%)
Frame = +3
Query: 30 QAIKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFK 209
+AI+EWP P+N SEVRSFHGL SFYRRF+K+FSTLA+PL ++++K GFK KQEQAF
Sbjct: 824 KAIREWPPPKNVSEVRSFHGLASFYRRFVKDFSTLAAPLNEIVEKDVGFKWGEKQEQAFA 883
Query: 210 LLNEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYF 347
L EKL AP+L+LPNF K+FE+ECDAS +GIG VL+Q+G PLAYF
Sbjct: 884 ALKEKLTQAPVLALPNFSKSFEIECDASNVGIGAVLLQEGHPLAYF 929
>emb|CAN80356.1| hypothetical protein VITISV_003506 [Vitis vinifera]
Length = 960
Score = 156 bits (394), Expect = 3e-36
Identities = 71/106 (66%), Positives = 92/106 (86%)
Frame = +3
Query: 30 QAIKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFK 209
+AIKEWPTP++ +EVRSFHGL SFY RF+K+FSTLA+PLT+++KK+ GFK ++Q++AF
Sbjct: 414 KAIKEWPTPKSITEVRSFHGLASFYFRFVKDFSTLAAPLTEIVKKSVGFKWGSEQDRAFI 473
Query: 210 LLNEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYF 347
+ E+LC APLLSLPNF KTFE+ECDASGIGI VLMQ+ +P+AYF
Sbjct: 474 EIKERLCGAPLLSLPNFSKTFEIECDASGIGIATVLMQEKRPIAYF 519
>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1588
Score = 154 bits (389), Expect = 1e-35
Identities = 72/106 (67%), Positives = 88/106 (83%)
Frame = +3
Query: 30 QAIKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFK 209
+AIKEWP P + +EVRSFHGL SFYRRF+++FST+A+PLT+VIKK + F +Q+ AF
Sbjct: 917 KAIKEWPKPNSVTEVRSFHGLASFYRRFVRDFSTIAAPLTEVIKKDKVFTWGKEQDDAFN 976
Query: 210 LLNEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYF 347
LL +KLCSAPLL LP+F K+FEVECDASG GIG VLMQD KP+AYF
Sbjct: 977 LLKDKLCSAPLLQLPDFSKSFEVECDASGKGIGAVLMQDSKPIAYF 1022
>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1588
Score = 154 bits (389), Expect = 1e-35
Identities = 72/106 (67%), Positives = 88/106 (83%)
Frame = +3
Query: 30 QAIKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFK 209
+AIKEWP P + +EVRSFHGL SFYRRF+++FST+A+PLT+VIKK + F +Q+ AF
Sbjct: 917 KAIKEWPKPNSVTEVRSFHGLASFYRRFVRDFSTIAAPLTEVIKKDKVFTWGKEQDDAFN 976
Query: 210 LLNEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYF 347
LL +KLCSAPLL LP+F K+FEVECDASG GIG VLMQD KP+AYF
Sbjct: 977 LLKDKLCSAPLLQLPDFSKSFEVECDASGKGIGAVLMQDSKPIAYF 1022
>ref|XP_006596896.1| PREDICTED: uncharacterized protein LOC102664455 [Glycine max]
Length = 1176
Score = 152 bits (385), Expect = 3e-35
Identities = 68/106 (64%), Positives = 88/106 (83%)
Frame = +3
Query: 30 QAIKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFK 209
+AI+EWPTP+ SEVR FHGL SFYRRF+K+FSTLA+PLT+V+KK GFK KQE+AF
Sbjct: 576 KAIQEWPTPKTLSEVRGFHGLASFYRRFVKDFSTLAAPLTEVVKKNVGFKWGKKQEEAFA 635
Query: 210 LLNEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYF 347
L +L +AP+L++PNF K+FE+ECDAS +GIG VL+Q+G P+AYF
Sbjct: 636 ALKHRLTNAPILAMPNFAKSFEIECDASNVGIGAVLLQEGHPIAYF 681
>gb|AAD17351.1| contains similarity to retrovirus-related polyproteins and to CCHC
zinc finger protein (Pfam: PF00098, Score=16.3, E=0.051,
E= 1) [Arabidopsis thaliana] gi|7267432|emb|CAB77944.1|
putative polyprotein [Arabidopsis thaliana]
Length = 1138
Score = 151 bits (382), Expect = 7e-35
Identities = 70/106 (66%), Positives = 87/106 (82%)
Frame = +3
Query: 30 QAIKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFK 209
+AI+EWP+P++ +VRSFHGL FYRRF+++FSTLA+PLT+VIKK GFK E E AF+
Sbjct: 545 KAIREWPSPKSVGKVRSFHGLAGFYRRFVRDFSTLAAPLTEVIKKNVGFKWEQAPEDAFQ 604
Query: 210 LLNEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYF 347
L EKL AP+LSLP+F KTFE+ECDA G+GIG VLMQD KP+AYF
Sbjct: 605 ALKEKLTHAPVLSLPDFLKTFEIECDAPGVGIGAVLMQDKKPIAYF 650
>ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662828 [Glycine max]
Length = 612
Score = 150 bits (380), Expect = 1e-34
Identities = 66/106 (62%), Positives = 87/106 (82%)
Frame = +3
Query: 30 QAIKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFK 209
+AI+EWPTP+ SEVR FHGL SFYRRF+K+FSTLA+PLT+++KK GFK KQE+AF
Sbjct: 97 KAIQEWPTPKTLSEVRGFHGLASFYRRFVKDFSTLAAPLTEIVKKNVGFKWGKKQEEAFA 156
Query: 210 LLNEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYF 347
L +L +AP+L++PNF K+FE+ECD S +GIG VL+Q+G P+AYF
Sbjct: 157 ALKHRLTNAPILAMPNFAKSFEIECDVSNVGIGAVLLQEGHPIAYF 202
>ref|XP_006575965.1| PREDICTED: uncharacterized protein LOC102669237, partial [Glycine
max]
Length = 1520
Score = 149 bits (375), Expect = 5e-34
Identities = 66/106 (62%), Positives = 85/106 (80%)
Frame = +3
Query: 30 QAIKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFK 209
+ I+EWPTP++ ++RSFHGL SFYRRF+ NFST+ASPL +++KK F KQEQAF
Sbjct: 1026 KVIQEWPTPKSVGDIRSFHGLASFYRRFVPNFSTIASPLNELVKKNVAFTWGEKQEQAFA 1085
Query: 210 LLNEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYF 347
LL EKL AP+L+LP+F KTFE+ECDASG+G+G VL+Q G P+AYF
Sbjct: 1086 LLKEKLTKAPVLALPDFSKTFELECDASGVGVGAVLLQGGHPIAYF 1131
>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
Length = 1475
Score = 145 bits (367), Expect = 4e-33
Identities = 68/106 (64%), Positives = 86/106 (81%)
Frame = +3
Query: 30 QAIKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFK 209
+AIK WP P+N ++VRSFHGL SFYRRFIK+FSTL +P+T+ +KK E FK K E +F
Sbjct: 820 KAIKSWPIPKNITDVRSFHGLASFYRRFIKDFSTLMAPITECMKKGE-FKWGDKAESSFN 878
Query: 210 LLNEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYF 347
++ EKLC +P+L+LPNF K FEVECDASGIGIG VL+Q+ KP+AYF
Sbjct: 879 IIKEKLCESPILTLPNFNKLFEVECDASGIGIGAVLVQEHKPIAYF 924
>ref|XP_006366953.1| PREDICTED: uncharacterized protein LOC102594328 [Solanum tuberosum]
Length = 1191
Score = 145 bits (365), Expect = 7e-33
Identities = 69/106 (65%), Positives = 85/106 (80%)
Frame = +3
Query: 30 QAIKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFK 209
+AIKEWP P + +EVRSFH L SFYRRF+++FST+A+PLT+VIKK + F +Q+ AF
Sbjct: 645 KAIKEWPKPNSVTEVRSFHRLASFYRRFVRDFSTIAAPLTEVIKKDKVFTWGKEQDDAFN 704
Query: 210 LLNEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYF 347
LL +KLCSAPLL L +F K+FEVECDASG GIG VLM D KP+AYF
Sbjct: 705 LLKDKLCSAPLLQLLDFSKSFEVECDASGKGIGAVLMPDSKPIAYF 750
>gb|AAQ72731.1| putative reverse transcriptase [Petunia x hybrida]
Length = 435
Score = 144 bits (362), Expect(2) = 7e-33
Identities = 66/106 (62%), Positives = 86/106 (81%)
Frame = +3
Query: 30 QAIKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFK 209
+AI++WPTP ++VRSFHGL SFYRRF+K+FS+ A+PLT+++KK + F QE+AF+
Sbjct: 95 EAIRDWPTPTTVTQVRSFHGLASFYRRFVKDFSSKAAPLTELVKKDQPFVWGEPQEKAFQ 154
Query: 210 LLNEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYF 347
L +L +APLL LP+F K FEVECDASG+GIGGVLMQD KP+AYF
Sbjct: 155 ELKGRLSTAPLLQLPDFGKAFEVECDASGVGIGGVLMQDSKPIAYF 200
Score = 22.3 bits (46), Expect(2) = 7e-33
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = +1
Query: 1 QGLQVDEGKVKQLRN 45
QG++VDE KV+ +R+
Sbjct: 85 QGVEVDESKVEAIRD 99
>gb|ABA98082.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 817
Score = 142 bits (359), Expect = 3e-32
Identities = 66/106 (62%), Positives = 83/106 (78%)
Frame = +3
Query: 30 QAIKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFK 209
+AI+ WPTP+ S+VRSF GL FYRRF+++FST+A+PL + KK F T QE AF
Sbjct: 267 EAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKVVPFTWGTSQENAFH 326
Query: 210 LLNEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYF 347
+L +KL APLL LPNF KTFE+ECDASGIG+GGVL+Q+GKP+AYF
Sbjct: 327 MLKDKLTHAPLLQLPNFNKTFELECDASGIGLGGVLLQEGKPVAYF 372
>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
aegilopoides]
Length = 1704
Score = 142 bits (358), Expect = 5e-32
Identities = 66/106 (62%), Positives = 84/106 (79%)
Frame = +3
Query: 30 QAIKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFK 209
+AI+ WP P+ ++VRSF GL FYRRF+++FST+A+PL +V KK F T QE+AF
Sbjct: 978 EAIESWPHPKTVTQVRSFLGLAGFYRRFVRDFSTIAAPLNEVTKKDVPFVWGTAQEEAFT 1037
Query: 210 LLNEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYF 347
+L +KL APLL LPNF KTFE+ECDASGIG+GGVL+QDGKP+AYF
Sbjct: 1038 VLKDKLTYAPLLQLPNFNKTFELECDASGIGLGGVLLQDGKPVAYF 1083
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 140 bits (353), Expect(2) = 8e-32
Identities = 65/106 (61%), Positives = 84/106 (79%)
Frame = +3
Query: 30 QAIKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFK 209
+AIK+WPTP N S+V+SF GL FYRRF++ FST+A+PL ++ KK F+ QE+AF+
Sbjct: 937 KAIKDWPTPENVSQVKSFRGLAGFYRRFVRGFSTIAAPLNELTKKGVAFQWGEPQEKAFQ 996
Query: 210 LLNEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYF 347
L ++L PLL LP+F KTFEVECDASGIGIGGVLMQ+G+P+AYF
Sbjct: 997 ELKKRLSEGPLLVLPDFTKTFEVECDASGIGIGGVLMQNGQPVAYF 1042
Score = 22.3 bits (46), Expect(2) = 8e-32
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +1
Query: 4 GLQVDEGKVKQLRN 45
G+QVDE KVK +++
Sbjct: 928 GIQVDESKVKAIKD 941
>gb|AAM15062.1| putative retroelement integrase [Arabidopsis thaliana]
Length = 1215
Score = 141 bits (355), Expect = 1e-31
Identities = 66/106 (62%), Positives = 84/106 (79%)
Frame = +3
Query: 30 QAIKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFK 209
+AI++WP+P+ EVRSFHGL FYRRF K+FST+ +PLT+V+KK GFK E QE+AF+
Sbjct: 635 KAIRDWPSPKTVGEVRSFHGLAGFYRRFFKDFSTIVAPLTEVMKKDVGFKWEKAQEEAFQ 694
Query: 210 LLNEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYF 347
L +KL +AP+L L F KTFE+ECDASGIGIG VLMQD K +A+F
Sbjct: 695 SLKDKLTNAPVLILSEFLKTFEIECDASGIGIGAVLMQDQKLIAFF 740
>dbj|BAH80072.1| putative unclassified retrotransposon protein [Oryza sativa Indica
Group]
Length = 848
Score = 140 bits (352), Expect = 2e-31
Identities = 65/106 (61%), Positives = 83/106 (78%)
Frame = +3
Query: 30 QAIKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFK 209
+AI+ WPTP+ S+VRSF GL FYRRF+++FST+A+PL + KK F T QE AF
Sbjct: 298 EAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGTSQENAFH 357
Query: 210 LLNEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYF 347
+L +KL APLL LP+F KTFE+ECDASGIG+GGVL+Q+GKP+AYF
Sbjct: 358 MLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYF 403
>emb|CAN63671.1| hypothetical protein VITISV_006425 [Vitis vinifera]
Length = 537
Score = 140 bits (352), Expect = 2e-31
Identities = 66/104 (63%), Positives = 83/104 (79%)
Frame = +3
Query: 36 IKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFKLL 215
I++WP+P + VRSFHGLTSFY+RF K+FS++ + LT+VIKK FK KQE+AF+L+
Sbjct: 355 IQDWPSPMSVGHVRSFHGLTSFYKRFEKDFSSITALLTEVIKKNVRFKWGDKQEKAFQLI 414
Query: 216 NEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYF 347
EKL APLL+LPNF KTFE+ECDA G+GIG LMQ GKP+AYF
Sbjct: 415 KEKLTHAPLLALPNFTKTFEIECDALGMGIGTTLMQGGKPIAYF 458