BLASTX nr result

ID: Catharanthus23_contig00016928 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00016928
         (480 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE48041.1| hypothetical protein [Nicotiana tomentosiformis]       67   3e-11
emb|CAJ32483.1| hypothetical protein [Nicotiana tabacum] gi|7779...    67   3e-11
ref|YP_004891645.1| unnamed protein product (chloroplast) [Nicot...    67   3e-11
gb|EPS74537.1| hypothetical protein M569_00254, partial [Genlise...    52   1e-06

>dbj|BAE48041.1| hypothetical protein [Nicotiana tomentosiformis]
          Length = 79

 Score = 67.4 bits (163), Expect(2) = 3e-11
 Identities = 31/41 (75%), Positives = 34/41 (82%)
 Frame = +1

Query: 241 MGTMEIVNAKDFSEKGILMIHWSGWRKEPEINSSIVRSHET 363
           MGT E+VNAKD  EKGILMIHWSGWR EPEINS I RS ++
Sbjct: 1   MGTTELVNAKDSIEKGILMIHWSGWRNEPEINSCIRRSEKS 41



 Score = 26.6 bits (57), Expect(2) = 3e-11
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +2

Query: 383 RVNIRPRKLSFFGLLNLDDKNQNQKCV 463
           RVNIRPRKL     L   +K QN+  V
Sbjct: 53  RVNIRPRKLFLLQNLGQYNKGQNKDLV 79


>emb|CAJ32483.1| hypothetical protein [Nicotiana tabacum]
           gi|77799603|dbj|BAE46692.1| hypothetical protein
           [Nicotiana sylvestris]
          Length = 79

 Score = 67.4 bits (163), Expect(2) = 3e-11
 Identities = 31/41 (75%), Positives = 34/41 (82%)
 Frame = +1

Query: 241 MGTMEIVNAKDFSEKGILMIHWSGWRKEPEINSSIVRSHET 363
           MGT E+VNAKD  EKGILMIHWSGWR EPEINS I RS ++
Sbjct: 1   MGTTELVNAKDSIEKGILMIHWSGWRNEPEINSCIRRSEKS 41



 Score = 26.6 bits (57), Expect(2) = 3e-11
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +2

Query: 383 RVNIRPRKLSFFGLLNLDDKNQNQKCV 463
           RVNIRPRKL     L   +K QN+  V
Sbjct: 53  RVNIRPRKLFLLQNLGQYNKGQNKDLV 79


>ref|YP_004891645.1| unnamed protein product (chloroplast) [Nicotiana undulata]
           gi|347453932|gb|AEO95590.1| hypothetical protein
           (chloroplast) [Nicotiana undulata]
           gi|347454043|gb|AEO95700.1| hypothetical protein
           [synthetic construct]
          Length = 79

 Score = 67.0 bits (162), Expect(2) = 3e-11
 Identities = 30/41 (73%), Positives = 34/41 (82%)
 Frame = +1

Query: 241 MGTMEIVNAKDFSEKGILMIHWSGWRKEPEINSSIVRSHET 363
           MGT E+VNAKD  EKGILM+HWSGWR EPEINS I RS ++
Sbjct: 1   MGTTELVNAKDSIEKGILMVHWSGWRNEPEINSCIRRSEKS 41



 Score = 26.6 bits (57), Expect(2) = 3e-11
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +2

Query: 383 RVNIRPRKLSFFGLLNLDDKNQNQKCV 463
           RVNIRPRKL     L   +K QN+  V
Sbjct: 53  RVNIRPRKLFLLQNLGQYNKGQNKDLV 79


>gb|EPS74537.1| hypothetical protein M569_00254, partial [Genlisea aurea]
          Length = 89

 Score = 52.0 bits (123), Expect(2) = 1e-06
 Identities = 30/48 (62%), Positives = 35/48 (72%), Gaps = 2/48 (4%)
 Frame = -2

Query: 272 SFAFTISIVPIASYLMLRSKFT--MELLMKFVLESIFSVFIGSKLLIF 135
           SFAF  SIVP AS LM+RS+F     +L++F  ESIF VFIGSKLL F
Sbjct: 1   SFAFKASIVPTASSLMIRSEFANGASILIEFNHESIFLVFIGSKLLFF 48



 Score = 26.2 bits (56), Expect(2) = 1e-06
 Identities = 14/23 (60%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
 Frame = -3

Query: 82  VLMLYYTA--FYEMTYKPYILEF 20
           V ML Y    FYEMT +PYIL F
Sbjct: 65  VFMLCYIVLFFYEMTPRPYILIF 87


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